MC01g1383 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1383
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC01: 18444930 .. 18445082 (-)
RNA-Seq Expression	MC01g1383
Synteny	MC01g1383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGTGCCAGGAGCGACGCAATCAACGGTGGACGTTTGTCGAGCAAATATTCCGACCGTCTGATCCCGAAGAGGGGCCAGGTGAAAATGGCGATCATGGCGGGAATTGCCCACTCTGTCACTTCTATGTTCTCTAACGGCGGCCGGAAA

mRNA sequence

ATGGCCGGTGCCAGGAGCGACGCAATCAACGGTGGACGTTTGTCGAGCAAATATTCCGACCGTCTGATCCCGAAGAGGGGCCAGGTGAAAATGGCGATCATGGCGGGAATTGCCCACTCTGTCACTTCTATGTTCTCTAACGGCGGCCGGAAA

Coding sequence (CDS)

ATGGCCGGTGCCAGGAGCGACGCAATCAACGGTGGACGTTTGTCGAGCAAATATTCCGACCGTCTGATCCCGAAGAGGGGCCAGGTGAAAATGGCGATCATGGCGGGAATTGCCCACTCTGTCACTTCTATGTTCTCTAACGGCGGCCGGAAA

Protein sequence

MAGARSDAINGGRLSSKYSDRLIPKRGQVKMAIMAGIAHSVTSMFSNGGRK

Homology

[Close]

BLAST of MC01g1383 vs. NCBI nr
Match: KAG6603714.1 (hypothetical protein SDJN03_04323, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.1 bits (196), Expect = 2.01e-17
Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1   MAGARSDAINGGRLSSKYSDRLIPKRGQVKMAIMAGIAHSVTSMFSNGGRK 51
           MAG    AINGG LS KYSDRLIPKRGQV M I+AGIAHSVTS+FS+GGRK
Sbjct: 92  MAGNSIKAINGGDLSRKYSDRLIPKRGQVTMGILAGIAHSVTSLFSHGGRK 142

[Close]

BLAST of MC01g1383 vs. NCBI nr
Match: MBA0695347.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 64.3 bits (155), Expect = 3.81e-12
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 1  MAGARSDAINGGRLSSKYSDRLIPKRGQVKMAIMAGIAHSVTSMFSNGGRK 51
          MAGAR + INGG +S + + R IP+RGQVK+AIMAGIAHS  S+F+   R+
Sbjct: 1  MAGARREMINGGNISRRIAGRPIPRRGQVKVAIMAGIAHSFASIFTTSSRR 51

[Close]

BLAST of MC01g1383 vs. NCBI nr
Match: KAB2007328.1 (hypothetical protein ES319_D10G022200v1 [Gossypium barbadense] >KAG4124113.1 hypothetical protein ERO13_D10G020250v2 [Gossypium hirsutum] >TYH47800.1 hypothetical protein ES332_D10G023800v1 [Gossypium tomentosum])

HSP 1 Score: 64.3 bits (155), Expect = 4.09e-12
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 1  MAGARSDAINGGRLSSKYSDRLIPKRGQVKMAIMAGIAHSVTSMFSNGGRK 51
          MAGAR + INGG +S + + R IP+RGQVK+AIMAGIAHS  S+F+   R+
Sbjct: 1  MAGARREMINGGNISRRIAGRPIPRRGQVKVAIMAGIAHSFASIFTTSSRR 51

[Close]

BLAST of MC01g1383 vs. NCBI nr
Match: OMO76568.1 (hypothetical protein CCACVL1_15597 [Corchorus capsularis])

HSP 1 Score: 63.9 bits (154), Expect = 5.81e-12
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 1  MAGARSDAINGGRLSSKYSDRLIPKRGQVKMAIMAGIAHSVTSMFSNGGRK 51
          MAGAR + INGG LSS+   R IP+RGQVK+AI+ GIAHSV S+FS   R+
Sbjct: 1  MAGARRELINGGNLSSRIVARPIPRRGQVKVAILVGIAHSVASIFSLTSRR 51

[Close]

BLAST of MC01g1383 vs. NCBI nr
Match: TYG97248.1 (hypothetical protein ES288_A10G023800v1 [Gossypium darwinii] >TYI04509.1 hypothetical protein ES332_A10G024100v1 [Gossypium tomentosum])

HSP 1 Score: 63.5 bits (153), Expect = 8.26e-12
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 1  MAGARSDAINGGRLSSKYSDRLIPKRGQVKMAIMAGIAHSVTSMFSNGGRK 51
          MAGAR + INGG +S + + R IP+RGQVK+AIMAGIAHS  S+F+   R+
Sbjct: 1  MAGARREMINGGNISRRIAGRPIPRRGQVKVAIMAGIAHSFASIFTASSRR 51

[Close]

BLAST of MC01g1383 vs. ExPASy TrEMBL
Match: A0A0A0KLE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517000 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.27e-16
Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 1  MAGARSDAINGGRLSSKYSDRLIPKRGQVKMAIMAGIAHSVTSMFSNGGRK 51
          MAG R +AIN G LS K SDRLIPKRGQVK+ I+ GIAHSVTS+FS+G RK
Sbjct: 1  MAGTRINAINHGNLSRKCSDRLIPKRGQVKLGIIVGIAHSVTSIFSHGSRK 51

[Close]

BLAST of MC01g1383 vs. ExPASy TrEMBL
Match: F6GYY1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00070 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.07e-14
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 1  MAGARSDAINGGRLSSKYSDRLIPKRGQVKMAIMAGIAHSVTSMFSNGGRK 51
          MAG R D INGG  S ++S R IPKRGQVK+AI  G AHSV S+FS GGR+
Sbjct: 1  MAGGRGDMINGGSFSQRFSGRPIPKRGQVKVAIAVGFAHSVASIFSLGGRR 51

[Close]

BLAST of MC01g1383 vs. ExPASy TrEMBL
Match: F6GYY0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.10e-13
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 1  MAGARSDAINGGRLSSKYSDRLIPKRGQVKMAIMAGIAHSVTSMFSNGGRK 51
          MAG R   INGG  S ++S R IPKRGQVK+ I+ G+AHSV S+FS GGR+
Sbjct: 1  MAGGRRAMINGGNFSQRFSGRPIPKRGQVKVGIVVGLAHSVASIFSLGGRR 51

[Close]

BLAST of MC01g1383 vs. ExPASy TrEMBL
Match: A0A7J8Y716 (Uncharacterized protein (Fragment) OS=Gossypium aridum OX=34290 GN=Goari_001976 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.85e-12
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 1  MAGARSDAINGGRLSSKYSDRLIPKRGQVKMAIMAGIAHSVTSMFSNGGRK 51
          MAGAR + INGG +S + + R IP+RGQVK+AIMAGIAHS  S+F+   R+
Sbjct: 1  MAGARREMINGGNISRRIAGRPIPRRGQVKVAIMAGIAHSFASIFTTSSRR 51

[Close]

BLAST of MC01g1383 vs. ExPASy TrEMBL
Match: A0A5D2IZC5 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D10G023800v1 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.98e-12
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 1  MAGARSDAINGGRLSSKYSDRLIPKRGQVKMAIMAGIAHSVTSMFSNGGRK 51
          MAGAR + INGG +S + + R IP+RGQVK+AIMAGIAHS  S+F+   R+
Sbjct: 1  MAGARREMINGGNISRRIAGRPIPRRGQVKVAIMAGIAHSFASIFTTSSRR 51

The following BLAST results are available for this feature:

BLAST of MC01g1383 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g1383 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603714.1	2.01e-17	78.43	hypothetical protein SDJN03_04323, partial [Cucurbita argyrosperma subsp. sorori...	[more]
MBA0695347.1	3.81e-12	58.82	hypothetical protein [Gossypium aridum]	[more]
KAB2007328.1	4.09e-12	58.82	hypothetical protein ES319_D10G022200v1 [Gossypium barbadense] >KAG4124113.1 hyp...	[more]
OMO76568.1	5.81e-12	62.75	hypothetical protein CCACVL1_15597 [Corchorus capsularis]	[more]
TYG97248.1	8.26e-12	58.82	hypothetical protein ES288_A10G023800v1 [Gossypium darwinii] >TYI04509.1 hypothe...	[more]

BLAST of MC01g1383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLE0	1.27e-16	72.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517000 PE=4 SV=1	[more]
F6GYY1	3.07e-14	64.71	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00070 PE=4 SV=...	[more]
F6GYY0	5.10e-13	60.78	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=...	[more]
A0A7J8Y716	1.85e-12	58.82	Uncharacterized protein (Fragment) OS=Gossypium aridum OX=34290 GN=Goari_001976 ...	[more]
A0A5D2IZC5	1.98e-12	58.82	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D10G023800v1 P...	[more]

BLAST of MC01g1383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR36615	PROTEIN, PUTATIVE-RELATED	coord: 1..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1383.1	MC01g1383.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane