MC01g1347 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g1347
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionactin-related protein 8-like
LocationMC01: 18128964 .. 18129734 (-)
RNA-Seq ExpressionMC01g1347
SyntenyMC01g1347
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTGATCTTCGAGCCAACGAAAGGAAGAGGGTTCACGATCGAAGTGGGTTTCTTCGACACCGTTTTGGAGATCAAAGAGAAGATTCAGAAATACCACCGCATCCCCATCCCCAAACAAACCCTAATCTTTAATGGCCACGTCCTTCAAGACGACCGCGACGTCGAATTCTGCGAAATCCTCCAAAACTCCCGCATCAAACTCATCGTTGCGCCATCCGATCACAACAACAGCAGCAGCAACAATAATAACAATAATAATAATAATGCTGCCGCTGCTGCTTCTGTCAAGATCGAAACTCCCAATTCTCCAATTTCTCCTTCCCCAAATTCCAACAATAAAATGATCCACCATCTCCAATCCCAATTCCCCATCGAGATCGACCCCACCAAAGATCAGATTATTATGGAATCCGCGGTGGTCCCTCTAAACGAGCTGTCCGACAACAATTCGGAGATTGAGGTGGTCTCGGCCGCCACGTCGGCGACGGCGGGCTCCACAGGGTCGTCGAAGAAGTTGAAAGTGATGGTGAAGCCGAAATGTGGGTCACAGAAGATACCGATGGAAGTGAACGCGTCTGACAACGTGGGGGAGCTGAAGAAGGAGCTGCAGAAGCTGCAGCAGAGACTCCATTTTCATCTCCCACAAGAGGGCTTCTTCTTCATTTACGACCGTGACGTCATGGACGAGGACCGCTCCTTCCGCTGGCATGGCGTCGCCCACGGCGACACCATCGAGATCTTCAATGGCAGTGTTACCGGCGGATCT

mRNA sequence

ATGGATGTGATCTTCGAGCCAACGAAAGGAAGAGGGTTCACGATCGAAGTGGGTTTCTTCGACACCGTTTTGGAGATCAAAGAGAAGATTCAGAAATACCACCGCATCCCCATCCCCAAACAAACCCTAATCTTTAATGGCCACGTCCTTCAAGACGACCGCGACGTCGAATTCTGCGAAATCCTCCAAAACTCCCGCATCAAACTCATCGTTGCGCCATCCGATCACAACAACAGCAGCAGCAACAATAATAACAATAATAATAATAATGCTGCCGGGTCGTCGAAGAAGTTGAAAGTGATGGTGAAGCCGAAATGTGGGTCACAGAAGATACCGATGGAAGTGAACGCGTCTGACAACGTGGGGGAGCTGAAGAAGGAGCTGCAGAAGCTGCAGCAGAGACTCCATTTTCATCTCCCACAAGAGGGCTTCTTCTTCATTTACGACCGTGACGTCATGGACGAGGACCGCTCCTTCCGCTGGCATGGCGTCGCCCACGGCGACACCATCGAGATCTTCAATGGCAGTGTTACCGGCGGATCT

Coding sequence (CDS)

ATGGATGTGATCTTCGAGCCAACGAAAGGAAGAGGGTTCACGATCGAAGTGGGTTTCTTCGACACCGTTTTGGAGATCAAAGAGAAGATTCAGAAATACCACCGCATCCCCATCCCCAAACAAACCCTAATCTTTAATGGCCACGTCCTTCAAGACGACCGCGACGTCGAATTCTGCGAAATCCTCCAAAACTCCCGCATCAAACTCATCGTTGCGCCATCCGATCACAACAACAGCAGCAGCAACAATAATAACAATAATAATAATAATGCTGCCGGGTCGTCGAAGAAGTTGAAAGTGATGGTGAAGCCGAAATGTGGGTCACAGAAGATACCGATGGAAGTGAACGCGTCTGACAACGTGGGGGAGCTGAAGAAGGAGCTGCAGAAGCTGCAGCAGAGACTCCATTTTCATCTCCCACAAGAGGGCTTCTTCTTCATTTACGACCGTGACGTCATGGACGAGGACCGCTCCTTCCGCTGGCATGGCGTCGCCCACGGCGACACCATCGAGATCTTCAATGGCAGTGTTACCGGCGGATCT

Protein sequence

MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS
Homology
BLAST of MC01g1347 vs. ExPASy Swiss-Prot
Match: Q9ZT95 (Ubiquitin domain-containing protein 7SL RNA1 OS=Arabidopsis thaliana OX=3702 GN=7SL1 PE=3 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-14
Identity = 73/260 (28.08%), Postives = 106/260 (40.77%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQ--------- 60
           M+V  +   G  F+I + F +TVLEIKEKI+K   IP+ KQ L  +G  L+         
Sbjct: 1   MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 61  ------------------------------DDRDVEFCEILQNS---------------- 120
                                         DD+  EFC I  +S                
Sbjct: 61  ILFESRLLLRISPDADPNQSNEQTEQSKQIDDKKQEFCGIQDSSESKKITRVMARRVHNI 120

Query: 121 -------------------------RIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLK- 173
                                    R   +V P++  ++S        ++ +   KK+K 
Sbjct: 121 YSSLPAYSLDELLGPKYSATVAVGGRTNQVVQPTEQASTSGTAKEVLRDSDSPVEKKIKT 180

BLAST of MC01g1347 vs. ExPASy Swiss-Prot
Match: Q9ZQZ6 (Ubiquitin domain-containing protein 7SL RNA2 OS=Arabidopsis thaliana OX=3702 GN=7SL2 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.1e-13
Identity = 75/259 (28.96%), Postives = 107/259 (41.31%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQ--------- 60
           M+V  +   G  F+I + F +TVL+IKEKI+K   IP+ KQ L  +G  L+         
Sbjct: 1   MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 61  -----------------------------DDRDVEFCEILQNS---RIKLIVAPSDHNNS 120
                                        DD+  EFC I  +S   ++  ++A   HN  
Sbjct: 61  ILFESLLLRISPDADPNQSNEQTEQSKQIDDKKQEFCGIQDSSESKKLTRVMARRVHNVY 120

Query: 121 SS-----------------------NNNNNNNNNAAGSS---------------KKLK-- 173
           SS                        N        A +S               KK+K  
Sbjct: 121 SSLPAYSLDELLGPKYSATVTVGGRTNQVVQTTEQASTSGTAKEVLRDSDSPVEKKIKTN 180

BLAST of MC01g1347 vs. ExPASy Swiss-Prot
Match: Q58G87 (Polyubiquitin 3 OS=Oryza sativa subsp. japonica OX=39947 GN=UBQ3 PE=2 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 4.1e-05
Identity = 41/143 (28.67%), Postives = 64/143 (44.76%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           M +  +   G+  T+EV F DT+  +K KIQ    IP  +Q LIF G  L+D R +    
Sbjct: 1   MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  ILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDN 120
           I + S + L++                     G    +++ VK   G + I +EV +SD 
Sbjct: 61  IQKESTLHLVL------------------RLRGG---MQIFVKTLTG-KTITLEVESSDT 120

Query: 121 VGELKKELQKL------QQRLHF 138
           +  +K ++Q        QQRL F
Sbjct: 121 IDNVKAKIQDKEGIPPDQQRLIF 121

BLAST of MC01g1347 vs. ExPASy Swiss-Prot
Match: P59669 (Polyubiquitin OS=Geodia cydonium OX=6047 PE=2 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 5.4e-05
Identity = 42/143 (29.37%), Postives = 63/143 (44.06%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           M +  +   G+  T+EV   DT+  +K KIQ    IP  +Q LIF G  L+D R +    
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 61  ILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDN 120
           I + S + L+V                     G    +++ VK   G + I +EV ASD 
Sbjct: 289 IQKESTLHLVV------------------RLRGG---MQIFVKTLTG-KTITLEVEASDT 348

Query: 121 VGELKKELQKL------QQRLHF 138
           +  +K ++Q        QQRL F
Sbjct: 349 IENVKAKIQDKEGIPPDQQRLIF 349

BLAST of MC01g1347 vs. ExPASy Swiss-Prot
Match: P0CG70 (Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=ubi PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 7.0e-05
Identity = 40/143 (27.97%), Postives = 65/143 (45.45%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           M +  +   G+  T+EV   DT+  +K+KIQ    IP  +Q LIF G  L+D R +    
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  ILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDN 120
           I + S + L++                     G    +++ VK   G + I +EV +SD 
Sbjct: 61  IQKESTLHLVL------------------RLRGG---MQIFVKTLTG-KTITLEVESSDT 120

Query: 121 VGELKKELQKL------QQRLHF 138
           +  +K+++Q        QQRL F
Sbjct: 121 IDNVKQKIQDKEGIPPDQQRLIF 121

BLAST of MC01g1347 vs. NCBI nr
Match: XP_022142282.1 (actin-related protein 8-like [Momordica charantia])

HSP 1 Score: 330 bits (847), Expect = 1.71e-112
Identity = 181/257 (70.43%), Postives = 181/257 (70.43%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAA---------------------------- 120
           ILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAA                            
Sbjct: 61  ILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAAAASVKIETPNSPISPSPNSNNKMIHHL 120

Query: 121 ------------------------------------------------GSSKKLKVMVKP 180
                                                           GSSKKLKVMVKP
Sbjct: 121 QSQFPIEIDPTKDQIIMESAVVPLNELSDNNSEIEVVSAATSATAGSTGSSKKLKVMVKP 180

BLAST of MC01g1347 vs. NCBI nr
Match: XP_008439960.1 (PREDICTED: uncharacterized protein LOC103484590 [Cucumis melo])

HSP 1 Score: 267 bits (682), Expect = 2.98e-88
Identity = 139/198 (70.20%), Postives = 159/198 (80.30%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVI  P +G  F IEVG+FDTVLEIKEKI+KYH IPIPKQTLIFNG +LQDDRDVEFCE
Sbjct: 1   MDVILVPEQGDTFGIEVGYFDTVLEIKEKIEKYHGIPIPKQTLIFNGRILQDDRDVEFCE 60

Query: 61  ILQNSRIKLIVAPSD--------------HN---NSSSNNNNNNNNNAAGSSKKLKVMVK 120
           ILQ+SRI+L+VA S+              HN   + SS+++  +   +  +S KLKVMVK
Sbjct: 61  ILQHSRIQLVVANSELSAQSQIGRLIMKQHNMIPDPSSHHHPPSGTTSTKNSNKLKVMVK 120

Query: 121 PKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHG 180
           PKCGS KIPMEVN +DNVGELKKEL+KLQQR+ FHLP EGFFFIYDRDVMDEDRSFRWHG
Sbjct: 121 PKCGSSKIPMEVNPTDNVGELKKELEKLQQRMQFHLPPEGFFFIYDRDVMDEDRSFRWHG 180

BLAST of MC01g1347 vs. NCBI nr
Match: XP_004134970.1 (ubiquitin domain-containing protein 7SL RNA1 [Cucumis sativus] >KAE8647664.1 hypothetical protein Csa_002851 [Cucumis sativus])

HSP 1 Score: 263 bits (673), Expect = 6.76e-87
Identity = 138/204 (67.65%), Postives = 153/204 (75.00%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVI  P KG  F IEVG+FDTVLEIKEKI+KY  IPIPKQTLIFNG +LQDDRDVEFCE
Sbjct: 1   MDVILVPEKGDTFGIEVGYFDTVLEIKEKIEKYQGIPIPKQTLIFNGRILQDDRDVEFCE 60

Query: 61  ILQNSRIKLIVA-----------------------PSDHNNSSSNNNNNNNNNAAGSSKK 120
           ILQ+SRI+L+VA                       PS H+  S   +  N+N       K
Sbjct: 61  ILQHSRIQLVVANSELSAQSQIGRLIMKQHNMIPDPSSHHPQSGTTSTKNSN-------K 120

Query: 121 LKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDR 180
           LKVMVKPKCG+ KIPMEVN +DNVGELKKEL+KLQQR+ FHLP EGFFFIYDRDVMDEDR
Sbjct: 121 LKVMVKPKCGNSKIPMEVNPTDNVGELKKELEKLQQRMQFHLPPEGFFFIYDRDVMDEDR 180

BLAST of MC01g1347 vs. NCBI nr
Match: XP_038881479.1 (ubiquitin domain-containing protein 7SL RNA1-like [Benincasa hispida])

HSP 1 Score: 262 bits (670), Expect = 3.43e-86
Identity = 142/214 (66.36%), Postives = 161/214 (75.23%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVIF P +G  F IEVGFFDTVLEIKEKI+KYH IPIPKQ+LIFNG +LQD RDVEFCE
Sbjct: 1   MDVIFVPEQGETFGIEVGFFDTVLEIKEKIEKYHGIPIPKQSLIFNGRILQDHRDVEFCE 60

Query: 61  ILQNSRIKLIVAPSD-------------HNN------------------SSSNNNNNNNN 120
           ILQ+SRI+L+VA S+              NN                  +SS NNNNNN+
Sbjct: 61  ILQHSRIQLVVANSELSAQSEIGRLIMKQNNILPDPPPPHQPPQPQKEITSSKNNNNNNS 120

Query: 121 NAAGSSK--KLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFI 180
           ++  ++   KLKVMVKPK G+ KI MEVN +DNVGELKKEL+KLQQR+ FHLP EGFFFI
Sbjct: 121 SSINNNNYNKLKVMVKPKSGNSKIAMEVNPTDNVGELKKELEKLQQRMQFHLPPEGFFFI 180

BLAST of MC01g1347 vs. NCBI nr
Match: XP_022950206.1 (biquitin domain-containing protein 7SL RNA1-like [Cucurbita moschata])

HSP 1 Score: 262 bits (669), Expect = 1.51e-85
Identity = 151/248 (60.89%), Postives = 161/248 (64.92%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P KG  F IEVGFFDTVLEIKEKIQKYH IPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQNSRIKLIVAPSDHNNSSSNNNNNNNN-------------------------NAA--- 120
           ILQ+SRI+L+VA    NNS S    + N+                         NAA   
Sbjct: 61  ILQHSRIQLLVASESQNNSQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNAASPT 120

Query: 121 --------------------------------------GSSK-KLKVMVKPKCGSQKIPM 180
                                                 GSSK KLKVMV+PK G+ KIPM
Sbjct: 121 ELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTGSSKNKLKVMVQPKFGNSKIPM 180

BLAST of MC01g1347 vs. ExPASy TrEMBL
Match: A0A6J1CMB8 (actin-related protein 8-like OS=Momordica charantia OX=3673 GN=LOC111012442 PE=4 SV=1)

HSP 1 Score: 330 bits (847), Expect = 8.26e-113
Identity = 181/257 (70.43%), Postives = 181/257 (70.43%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAA---------------------------- 120
           ILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAA                            
Sbjct: 61  ILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAAAASVKIETPNSPISPSPNSNNKMIHHL 120

Query: 121 ------------------------------------------------GSSKKLKVMVKP 180
                                                           GSSKKLKVMVKP
Sbjct: 121 QSQFPIEIDPTKDQIIMESAVVPLNELSDNNSEIEVVSAATSATAGSTGSSKKLKVMVKP 180

BLAST of MC01g1347 vs. ExPASy TrEMBL
Match: A0A1S3AZZ9 (uncharacterized protein LOC103484590 OS=Cucumis melo OX=3656 GN=LOC103484590 PE=4 SV=1)

HSP 1 Score: 267 bits (682), Expect = 1.44e-88
Identity = 139/198 (70.20%), Postives = 159/198 (80.30%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVI  P +G  F IEVG+FDTVLEIKEKI+KYH IPIPKQTLIFNG +LQDDRDVEFCE
Sbjct: 1   MDVILVPEQGDTFGIEVGYFDTVLEIKEKIEKYHGIPIPKQTLIFNGRILQDDRDVEFCE 60

Query: 61  ILQNSRIKLIVAPSD--------------HN---NSSSNNNNNNNNNAAGSSKKLKVMVK 120
           ILQ+SRI+L+VA S+              HN   + SS+++  +   +  +S KLKVMVK
Sbjct: 61  ILQHSRIQLVVANSELSAQSQIGRLIMKQHNMIPDPSSHHHPPSGTTSTKNSNKLKVMVK 120

Query: 121 PKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHG 180
           PKCGS KIPMEVN +DNVGELKKEL+KLQQR+ FHLP EGFFFIYDRDVMDEDRSFRWHG
Sbjct: 121 PKCGSSKIPMEVNPTDNVGELKKELEKLQQRMQFHLPPEGFFFIYDRDVMDEDRSFRWHG 180

BLAST of MC01g1347 vs. ExPASy TrEMBL
Match: A0A6J1GE65 (biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita moschata OX=3662 GN=LOC111453369 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 7.33e-86
Identity = 151/248 (60.89%), Postives = 161/248 (64.92%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P KG  F IEVGFFDTVLEIKEKIQKYH IPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQNSRIKLIVAPSDHNNSSSNNNNNNNN-------------------------NAA--- 120
           ILQ+SRI+L+VA    NNS S    + N+                         NAA   
Sbjct: 61  ILQHSRIQLLVASESQNNSQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNAASPT 120

Query: 121 --------------------------------------GSSK-KLKVMVKPKCGSQKIPM 180
                                                 GSSK KLKVMV+PK G+ KIPM
Sbjct: 121 ELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTGSSKNKLKVMVQPKFGNSKIPM 180

BLAST of MC01g1347 vs. ExPASy TrEMBL
Match: A0A6J1IPZ4 (biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita maxima OX=3661 GN=LOC111478395 PE=4 SV=1)

HSP 1 Score: 257 bits (656), Expect = 9.01e-84
Identity = 150/256 (58.59%), Postives = 163/256 (63.67%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P KG  F IEVGFFDTVLEIKEKIQKYH IPIPKQTLIFNGHVLQDDRDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQNSRIKLIVAPSDHNNSSSNNN-------NNN----------------------NNNA 120
           ILQ+SRI+L+VA    NNS S +        N++                       +NA
Sbjct: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120

Query: 121 A---------------------------------------------GSSK-KLKVMVKPK 180
           +                                             GSSK KLKVMV+PK
Sbjct: 121 SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPGSSKNKLKVMVQPK 180

BLAST of MC01g1347 vs. ExPASy TrEMBL
Match: A0A6P4PD81 (UV excision repair protein rhp23-like isoform X2 OS=Gossypium arboreum OX=29729 GN=LOC108482765 PE=4 SV=1)

HSP 1 Score: 248 bits (634), Expect = 4.50e-81
Identity = 133/211 (63.03%), Postives = 155/211 (73.46%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDVIFE  KG+ F+IEVGFFDTVLEIKEKI KYH IPIP QTLIFNG+VLQDDRDVE+CE
Sbjct: 1   MDVIFETQKGKPFSIEVGFFDTVLEIKEKIHKYHGIPIPHQTLIFNGNVLQDDRDVEYCE 60

Query: 61  ILQNSRIKLIVA-----------------------PSDHNNSSSNNNNNNNNNAAGSS-- 120
           ILQNSRI+L+V+                       PS   N+  N+N  ++N    S   
Sbjct: 61  ILQNSRIQLLVSSDSDTSNSTKQPQPNAAAADHQLPSPAKNAQLNSNTPSSNTVVPSETD 120

Query: 121 -----KKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDR 180
                KKLK++V PKCG++KIP+EVNA+DNV EL+KELQKL QRL FHLPQEG+FFIY +
Sbjct: 121 VNDNPKKLKLLVLPKCGTKKIPVEVNATDNVSELRKELQKLHQRLQFHLPQEGYFFIYKQ 180

BLAST of MC01g1347 vs. TAIR 10
Match: AT4G05230.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 3.8e-54
Identity = 115/210 (54.76%), Postives = 144/210 (68.57%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV FE   G  F IE+G++DTVLEIK+KI+KY RIP+ KQTL+F G+VLQD  D+E C 
Sbjct: 1   MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60

Query: 61  ILQNSRIKLIVAPSDHNNS------------------SSN-----------NNNNNNNNA 120
           IL +SRI+L ++  D + +                  +SN           +NNNNNNN 
Sbjct: 61  ILNHSRIQLSISSPDQSRNNIQVFKTEQFPQSNSTEQTSNGHHESTVMIPMSNNNNNNN- 120

Query: 121 AGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRD 180
               KKL+VMV PK G++KIP++VNA DNVGEL+KEL K+QQR    LPQEG+FFIY ++
Sbjct: 121 ---PKKLRVMVLPKSGTRKIPVDVNAGDNVGELRKELAKIQQRFQLSLPQEGYFFIYKQN 180

Query: 181 VMDEDRSFRWHGVAHGDTIEIFNGSVTGGS 182
           VMDE+RSFRWH V  GDTIEIFNGSV+GGS
Sbjct: 181 VMDENRSFRWHRVDQGDTIEIFNGSVSGGS 206

BLAST of MC01g1347 vs. TAIR 10
Match: AT4G05260.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20
Identity = 79/256 (30.86%), Postives = 114/256 (44.53%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV FE   GR F IE+G++DTVLEIK+KI+KY RIP+P QTL F G+ L+D  D+  C+
Sbjct: 1   MDVYFETQNGRKFCIELGYWDTVLEIKKKIEKYQRIPVPNQTLFF-GNALEDHLDIGQCK 60

Query: 61  ILQNSRIKLIVAPSDHNNSSS------------------------------------NNN 120
           ILQNS + L V P  ++N+                                       ++
Sbjct: 61  ILQNSHVVLFVLPDPNDNNDQVLQTEEQPPIIGDLIYGEDLPLTTEVVLNIRPFCPVQDS 120

Query: 121 NNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVN----ASDNVGE----------------- 173
              NN+ +  S   K ++K   G Q  P+  N     SD+V E                 
Sbjct: 121 PVRNNDQSPPSDAAKDIIK---GHQDSPVRNNEQTPPSDSVKENTNIQDSPVGKIILTLR 180

BLAST of MC01g1347 vs. TAIR 10
Match: AT4G03370.1 (Ubiquitin family protein )

HSP 1 Score: 94.7 bits (234), Expect = 7.9e-20
Identity = 81/280 (28.93%), Postives = 113/280 (40.36%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           M +  E   G  F+I++G  DTVL  K KI+   RIP+ +QT+ F G +L+D  D+   +
Sbjct: 1   MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60

Query: 61  ILQNSRIKLIVAPSDH-------------------------------------------- 120
           ILQN  + L ++P D+                                            
Sbjct: 61  ILQNPLLHLSISPDDNPTQNQVPQSPSNPIHEFVKNQDSAEDKKNPVLLHQTGKPPLPPK 120

Query: 121 ------NNSSSN-----------------------------NNNNNNNNAAGSSK----- 179
                  N S N                             N +    N   SS      
Sbjct: 121 SSPLTTENFSKNQHDRPVITKMVPELLGPQGTSPVTVGRRRNRDQEVQNRVSSSSDSVKE 180

BLAST of MC01g1347 vs. TAIR 10
Match: AT4G03360.1 (Ubiquitin family protein )

HSP 1 Score: 87.8 bits (216), Expect = 9.7e-18
Identity = 84/276 (30.43%), Postives = 116/276 (42.03%), Query Frame = 0

Query: 3   VIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEIL 62
           VI E   G  FTI+V F+DTVL IK KI+     P+ KQ LIF   VLQD  ++  C+I 
Sbjct: 4   VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 63

Query: 63  QNSRIKLIVAPSDH---------NNSSSNNNN------NNNNN----------------- 122
            NSRI L ++P D+         N S S  +N      NN ++                 
Sbjct: 64  HNSRILLSISPDDNPTQNQVPQTNQSPSTPSNPIHEFVNNQDSPLSPKSSALTMEKFSKN 123

Query: 123 --------------------------------------AAGS------------------ 178
                                                 A GS                  
Sbjct: 124 QQDRPPLMRVVAKRIDNGSSRPSYSLDELLAPRDSSTVAVGSIRNRDQEVKNRVSSPSDS 183

BLAST of MC01g1347 vs. TAIR 10
Match: AT4G02950.1 (Ubiquitin family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 83/278 (29.86%), Postives = 117/278 (42.09%), Query Frame = 0

Query: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60
           + VI E   G  FTI+V F+DTVL IK KI+     P+ KQ LIF   VLQD  ++  C+
Sbjct: 36  ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95

Query: 61  ILQNSRIKLIVAPSDH---------NNSSSNNNN------NNNNN--------------- 120
           I  NSRI L ++P D+         N S S  +N      NN ++               
Sbjct: 96  IRHNSRILLSISPDDNPTQNQVPQTNQSPSTPSNPIHEFVNNQDSPLSPQSSALTMEKFS 155

Query: 121 ----------------------------------------AAGS---------------- 178
                                                   A GS                
Sbjct: 156 KNQQDRPPLMRVVAKRIDNGSSRPSYSLDELLAPRDSSTVAVGSIRNRDQEVKNRESSPS 215

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9ZT953.7e-1428.08Ubiquitin domain-containing protein 7SL RNA1 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q9ZQZ69.1e-1328.96Ubiquitin domain-containing protein 7SL RNA2 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q58G874.1e-0528.67Polyubiquitin 3 OS=Oryza sativa subsp. japonica OX=39947 GN=UBQ3 PE=2 SV=2[more]
P596695.4e-0529.37Polyubiquitin OS=Geodia cydonium OX=6047 PE=2 SV=2[more]
P0CG707.0e-0527.97Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 ... [more]
Match NameE-valueIdentityDescription
XP_022142282.11.71e-11270.43actin-related protein 8-like [Momordica charantia][more]
XP_008439960.12.98e-8870.20PREDICTED: uncharacterized protein LOC103484590 [Cucumis melo][more]
XP_004134970.16.76e-8767.65ubiquitin domain-containing protein 7SL RNA1 [Cucumis sativus] >KAE8647664.1 hyp... [more]
XP_038881479.13.43e-8666.36ubiquitin domain-containing protein 7SL RNA1-like [Benincasa hispida][more]
XP_022950206.11.51e-8560.89biquitin domain-containing protein 7SL RNA1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A6J1CMB88.26e-11370.43actin-related protein 8-like OS=Momordica charantia OX=3673 GN=LOC111012442 PE=4... [more]
A0A1S3AZZ91.44e-8870.20uncharacterized protein LOC103484590 OS=Cucumis melo OX=3656 GN=LOC103484590 PE=... [more]
A0A6J1GE657.33e-8660.89biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1IPZ49.01e-8458.59biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6P4PD814.50e-8163.03UV excision repair protein rhp23-like isoform X2 OS=Gossypium arboreum OX=29729 ... [more]
Match NameE-valueIdentityDescription
AT4G05230.13.8e-5454.76Ubiquitin-like superfamily protein [more]
AT4G05260.11.2e-2030.86Ubiquitin-like superfamily protein [more]
AT4G03370.17.9e-2028.93Ubiquitin family protein [more]
AT4G03360.19.7e-1830.43Ubiquitin family protein [more]
AT4G02950.11.3e-1729.86Ubiquitin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..134
NoneNo IPR availableGENE3D3.10.20.90coord: 1..70
e-value: 4.7E-17
score: 63.7
NoneNo IPR availableGENE3D3.10.20.90coord: 72..173
e-value: 1.7E-9
score: 39.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..96
NoneNo IPR availablePANTHERPTHR10621:SF38UBIQUITIN DOMAIN-CONTAINING PROTEIN 7SL RNA1-RELATEDcoord: 89..180
NoneNo IPR availablePANTHERPTHR10621:SF38UBIQUITIN DOMAIN-CONTAINING PROTEIN 7SL RNA1-RELATEDcoord: 1..87
NoneNo IPR availablePANTHERPTHR10621UV EXCISION REPAIR PROTEIN RAD23coord: 1..87
coord: 89..180
NoneNo IPR availableCDDcd17039Ubl_ubiquitin_likecoord: 100..173
e-value: 0.00106338
score: 34.109
NoneNo IPR availableCDDcd17039Ubl_ubiquitin_likecoord: 3..70
e-value: 1.61619E-11
score: 55.295
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 100..175
e-value: 9.1
score: 5.1
coord: 1..72
e-value: 9.7E-11
score: 51.7
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 106..171
e-value: 1.2E-5
score: 25.0
coord: 9..72
e-value: 1.3E-14
score: 53.7
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 1..71
score: 15.361754
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 98..179
score: 9.721926
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 27..52
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 80..172
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g1347.1MC01g1347.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding