MC01g1338 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1338
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Patatin
Location	MC01: 18070440 .. 18070793 (-)
RNA-Seq Expression	MC01g1338
Synteny	MC01g1338

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAAAGGAATCAGCACAAGCAGAAGCTTCTCGGAGAAAATGGGCAGCGTTGCTCCACTAGCCATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATCGAGTACTTCACCAAGCTTGAACTCGAACGCCATGGCGGCTCCCAGAGGATAACTGCTGAAGCTTCGAGAAGAGGAGATTCAAAGCCAAGCTTCTGGCTTCTGTCGTCCACTTGGAAGTGGAAGAAGAGAAGATCAGGCAGCACCAATGGGATTCTCCCTAACATTTGCTCTGCTGTTGAATTGTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGAAGAT

mRNA sequence

ATGTATAAAGGAATCAGCACAAGCAGAAGCTTCTCGGAGAAAATGGGCAGCGTTGCTCCACTAGCCATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATCGAGTACTTCACCAAGCTTGAACTCGAACGCCATGGCGGCTCCCAGAGGATAACTGCTGAAGCTTCGAGAAGAGGAGATTCAAAGCCAAGCTTCTGGCTTCTGTCGTCCACTTGGAAGTGGAAGAAGAGAAGATCAGGCAGCACCAATGGGATTCTCCCTAACATTTGCTCTGCTGTTGAATTGTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGAAGAT

Coding sequence (CDS)

ATGTATAAAGGAATCAGCACAAGCAGAAGCTTCTCGGAGAAAATGGGCAGCGTTGCTCCACTAGCCATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATCGAGTACTTCACCAAGCTTGAACTCGAACGCCATGGCGGCTCCCAGAGGATAACTGCTGAAGCTTCGAGAAGAGGAGATTCAAAGCCAAGCTTCTGGCTTCTGTCGTCCACTTGGAAGTGGAAGAAGAGAAGATCAGGCAGCACCAATGGGATTCTCCCTAACATTTGCTCTGCTGTTGAATTGTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGAAGAT

Protein sequence

MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED

Homology

[Close]

BLAST of MC01g1338 vs. NCBI nr
Match: XP_022142335.1 (uncharacterized protein LOC111012477 [Momordica charantia])

HSP 1 Score: 240 bits (613), Expect = 6.31e-80
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
           MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR
Sbjct: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60

Query: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118
           RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED
Sbjct: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118

[Close]

BLAST of MC01g1338 vs. NCBI nr
Match: XP_022926407.1 (uncharacterized protein LOC111433571 [Cucurbita moschata] >KAG7026623.1 hypothetical protein SDJN02_10625, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203 bits (516), Expect = 3.68e-65
Identity = 99/118 (83.90%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
           MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60

Query: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118
           R DSK SFWLLS +WKWKKRR+   NGILPNICSAVELSKSNRFNGIPGFGYRILK+D
Sbjct: 61  RSDSKTSFWLLSLSWKWKKRRTN--NGILPNICSAVELSKSNRFNGIPGFGYRILKDD 116

[Close]

BLAST of MC01g1338 vs. NCBI nr
Match: KAG6594656.1 (hypothetical protein SDJN03_11209, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202 bits (514), Expect = 7.42e-65
Identity = 99/118 (83.90%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
           MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60

Query: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118
           R DSK SFWLLS +WKWKKRR+   NGILPNICSAVELSKSNRFNGIPGFGYRILK D
Sbjct: 61  RSDSKTSFWLLSLSWKWKKRRTN--NGILPNICSAVELSKSNRFNGIPGFGYRILKND 116

[Close]

BLAST of MC01g1338 vs. NCBI nr
Match: XP_023003961.1 (uncharacterized protein LOC111497407 [Cucurbita maxima])

HSP 1 Score: 202 bits (513), Expect = 1.05e-64
Identity = 98/118 (83.05%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
           MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60

Query: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118
           R DS+ SFWLLS +WKWKKRR+   NGILPNICSAVELSKSNRFNGIPGFGYRILK+D
Sbjct: 61  RSDSRTSFWLLSLSWKWKKRRTN--NGILPNICSAVELSKSNRFNGIPGFGYRILKDD 116

[Close]

BLAST of MC01g1338 vs. NCBI nr
Match: XP_023518155.1 (uncharacterized protein LOC111781699 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201 bits (511), Expect = 2.13e-64
Identity = 98/118 (83.05%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
           MY+GIS S SF E+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1   MYEGISRSSSFCEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60

Query: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118
           R DSK SFWLLS +WKWKKRR+   NGILPNICSAVELSKSNRFNGIPGFGYRILK+D
Sbjct: 61  RSDSKTSFWLLSLSWKWKKRRTN--NGILPNICSAVELSKSNRFNGIPGFGYRILKDD 116

[Close]

BLAST of MC01g1338 vs. ExPASy TrEMBL
Match: A0A6J1CKN5 (uncharacterized protein LOC111012477 OS=Momordica charantia OX=3673 GN=LOC111012477 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 3.05e-80
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
           MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR
Sbjct: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60

Query: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118
           RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED
Sbjct: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118

[Close]

BLAST of MC01g1338 vs. ExPASy TrEMBL
Match: A0A6J1EEE9 (uncharacterized protein LOC111433571 OS=Cucurbita moschata OX=3662 GN=LOC111433571 PE=4 SV=1)

HSP 1 Score: 203 bits (516), Expect = 1.78e-65
Identity = 99/118 (83.90%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
           MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60

Query: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118
           R DSK SFWLLS +WKWKKRR+   NGILPNICSAVELSKSNRFNGIPGFGYRILK+D
Sbjct: 61  RSDSKTSFWLLSLSWKWKKRRTN--NGILPNICSAVELSKSNRFNGIPGFGYRILKDD 116

[Close]

BLAST of MC01g1338 vs. ExPASy TrEMBL
Match: A0A6J1KQQ8 (uncharacterized protein LOC111497407 OS=Cucurbita maxima OX=3661 GN=LOC111497407 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 5.11e-65
Identity = 98/118 (83.05%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
           MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60

Query: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118
           R DS+ SFWLLS +WKWKKRR+   NGILPNICSAVELSKSNRFNGIPGFGYRILK+D
Sbjct: 61  RSDSRTSFWLLSLSWKWKKRRTN--NGILPNICSAVELSKSNRFNGIPGFGYRILKDD 116

[Close]

BLAST of MC01g1338 vs. ExPASy TrEMBL
Match: A0A6J1IJL8 (uncharacterized protein LOC111477686 OS=Cucurbita maxima OX=3661 GN=LOC111477686 PE=4 SV=1)

HSP 1 Score: 194 bits (493), Expect = 5.19e-62
Identity = 95/118 (80.51%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
           MYKG+S SRSFSEKM  +APLAIGTRGTVGSLVMKEIEYFTK E+ERHG SQRI+ +ASR
Sbjct: 1   MYKGMSRSRSFSEKMDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASR 60

Query: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118
           R D K SFWL+S TWKWKKR+    NGILPNICSAVELSKSNRFNGIPGF YRILK D
Sbjct: 61  RSDCKGSFWLVSLTWKWKKRKGN--NGILPNICSAVELSKSNRFNGIPGFSYRILKHD 116

[Close]

BLAST of MC01g1338 vs. ExPASy TrEMBL
Match: A0A5D3CRM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006580 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 4.22e-59
Identity = 96/119 (80.67%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 1   MYKGISTSRSFSEKMG-SVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEAS 60
           MYKG+S SRSFSEKMG +VAPLAIGTRGTVGSLVMKEIEYFT LELERHG S  I   A 
Sbjct: 1   MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTIRGNAL 60

Query: 61  RRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 118
           RR DSK SFWLLS TWKWKKR++   NGILPNI SAVE SKSNRFNGIPGFGYRILK+D
Sbjct: 61  RRSDSKGSFWLLSLTWKWKKRKNN--NGILPNISSAVEFSKSNRFNGIPGFGYRILKDD 117

[Close]

BLAST of MC01g1338 vs. TAIR 10
Match: AT4G21780.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-16
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 19  APLAIGTRGTVGSLVMKEIEYFTKLEL------ERHGGSQ--RITAEASRRGDSKPSFWL 78
           AP+AIGTRGT+GSLV KEI+YF            R G S+  + T +   R  S+   W 
Sbjct: 3   APIAIGTRGTIGSLVRKEIDYFKNFSTCHPQFDPRRGNSEENKNTFKQRDRSSSRLGSWF 62

Query: 79  LSSTWKWKKRRS-GSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 119
             + W+ KKR++ G      P++CSAVE+S  NR   +PGF YRILK D
Sbjct: 63  SKTKWRKKKRQTRGGGGKFFPSMCSAVEVSGENR---VPGFNYRILKSD 108

The following BLAST results are available for this feature:

BLAST of MC01g1338 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g1338 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142335.1	6.31e-80	100.00	uncharacterized protein LOC111012477 [Momordica charantia]	[more]
XP_022926407.1	3.68e-65	83.90	uncharacterized protein LOC111433571 [Cucurbita moschata] >KAG7026623.1 hypothet...	[more]
KAG6594656.1	7.42e-65	83.90	hypothetical protein SDJN03_11209, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023003961.1	1.05e-64	83.05	uncharacterized protein LOC111497407 [Cucurbita maxima]	[more]
XP_023518155.1	2.13e-64	83.05	uncharacterized protein LOC111781699 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC01g1338 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKN5	3.05e-80	100.00	uncharacterized protein LOC111012477 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1EEE9	1.78e-65	83.90	uncharacterized protein LOC111433571 OS=Cucurbita moschata OX=3662 GN=LOC1114335...	[more]
A0A6J1KQQ8	5.11e-65	83.05	uncharacterized protein LOC111497407 OS=Cucurbita maxima OX=3661 GN=LOC111497407...	[more]
A0A6J1IJL8	5.19e-62	80.51	uncharacterized protein LOC111477686 OS=Cucurbita maxima OX=3661 GN=LOC111477686...	[more]
A0A5D3CRM5	4.22e-59	80.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MC01g1338 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21780.1	2.0e-16	44.04	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35131	EXPRESSED PROTEIN	coord: 6..118
None	No IPR available	PANTHER	PTHR35131:SF1	EXPRESSED PROTEIN	coord: 6..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1338.1	MC01g1338.1	mRNA