MC01g1335 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1335
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC01: 18058334 .. 18058669 (-)
RNA-Seq Expression	MC01g1335
Synteny	MC01g1335

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTTCTTCTCATTAGGAGGCCAAATGGCTACTCCAAGGTTGATAAAGAAGACCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAAAGTGTTGGAACGAGCAGAGTCCATGGGGAAACCTTCGTATCTGAGAATCAGAATTCGAAGGCTGAAAGTTAGATTTGGGAGAAGATTGAAGAAGCTGAAGAAGAGTGCACTGGCAAGTATTTCCGCTGCCAAGATTGGTGTTTACAAGCAAGTCATTGGTCAGCTCAGAAATTGTAAGTCTTTGTTTGGCCGAAAAGAAGCGACCATTGCCAATCTTTCTCCTTTTTTATCATCC

mRNA sequence

ATGAGTTTTCTTCTCATTAGGAGGCCAAATGGCTACTCCAAGGTTGATAAAGAAGACCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAAAGTGTTGGAACGAGCAGAGTCCATGGGGAAACCTTCGTATCTGAGAATCAGAATTCGAAGGCTGAAAGTTAGATTTGGGAGAAGATTGAAGAAGCTGAAGAAGAGTGCACTGGCAAGTATTTCCGCTGCCAAGATTGGTGTTTACAAGCAAGTCATTGGTCAGCTCAGAAATTGTAAGTCTTTGTTTGGCCGAAAAGAAGCGACCATTGCCAATCTTTCTCCTTTTTTATCATCC

Coding sequence (CDS)

ATGAGTTTTCTTCTCATTAGGAGGCCAAATGGCTACTCCAAGGTTGATAAAGAAGACCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAAAGTGTTGGAACGAGCAGAGTCCATGGGGAAACCTTCGTATCTGAGAATCAGAATTCGAAGGCTGAAAGTTAGATTTGGGAGAAGATTGAAGAAGCTGAAGAAGAGTGCACTGGCAAGTATTTCCGCTGCCAAGATTGGTGTTTACAAGCAAGTCATTGGTCAGCTCAGAAATTGTAAGTCTTTGTTTGGCCGAAAAGAAGCGACCATTGCCAATCTTTCTCCTTTTTTATCATCC

Protein sequence

MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFGRRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS

Homology

[Close]

BLAST of MC01g1335 vs. NCBI nr
Match: XP_022142336.1 (uncharacterized protein LOC111012478 [Momordica charantia])

HSP 1 Score: 211 bits (537), Expect = 1.30e-68
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60
           MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG
Sbjct: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112
           RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS
Sbjct: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112

[Close]

BLAST of MC01g1335 vs. NCBI nr
Match: XP_038883675.1 (uncharacterized protein LOC120074584 [Benincasa hispida])

HSP 1 Score: 180 bits (457), Expect = 2.07e-56
Identity = 95/112 (84.82%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60
           MSF+LIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFG
Sbjct: 1   MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112
           RRLKKLKKSA+ASIS  KIGVYKQVI Q+RNCKSLFG K+    N    LSS
Sbjct: 61  RRLKKLKKSAMASISTLKIGVYKQVISQIRNCKSLFGPKQTHFPNFPLLLSS 112

[Close]

BLAST of MC01g1335 vs. NCBI nr
Match: XP_023003962.1 (uncharacterized protein LOC111497408 [Cucurbita maxima])

HSP 1 Score: 174 bits (441), Expect = 5.69e-54
Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60
           MSF+L++  NGYSKVDKEDPEEIIHRRAQF+INKVLERA+SMGK SYLRIRIRRL+VRFG
Sbjct: 1   MSFVLVKSSNGYSKVDKEDPEEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60

Query: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112
           RRLKKLKKSA+ASI   KI VYKQ+I Q+RNCKSLFGRKE   ANL P LSS
Sbjct: 61  RRLKKLKKSAMASICNVKISVYKQIICQIRNCKSLFGRKETNFANLPPLLSS 112

[Close]

BLAST of MC01g1335 vs. NCBI nr
Match: KGN49119.1 (hypothetical protein Csa_003853 [Cucumis sativus])

HSP 1 Score: 172 bits (436), Expect = 3.29e-53
Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 0


Query: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60
           MS +L +R NGY KVDKEDPEEIIHRRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFG
Sbjct: 1   MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112
           RRLK+LKKSA+ SIS  KIGVYKQVI Q+RNCKSLFGRK+   AN    LSS
Sbjct: 61  RRLKRLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQTNFANFPVLLSS 112

[Close]

BLAST of MC01g1335 vs. NCBI nr
Match: XP_008439979.1 (PREDICTED: uncharacterized protein LOC103484604 [Cucumis melo] >TYK13053.1 uncharacterized protein E5676_scaffold255G006550 [Cucumis melo var. makuwa])

HSP 1 Score: 171 bits (433), Expect = 9.44e-53
Identity = 90/112 (80.36%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60
           MSF+L +RPNGY KVDKEDPEEII RRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFG
Sbjct: 1   MSFVLTKRPNGYCKVDKEDPEEIIRRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112
           +RLKKLKKSA+ASIS  K+GVYKQVI Q+RN KSLFGRK+   AN    LSS
Sbjct: 61  KRLKKLKKSAMASISTLKVGVYKQVITQIRNYKSLFGRKQTKFANFPVLLSS 112

[Close]

BLAST of MC01g1335 vs. ExPASy TrEMBL
Match: A0A6J1CLW2 (uncharacterized protein LOC111012478 OS=Momordica charantia OX=3673 GN=LOC111012478 PE=4 SV=1)

HSP 1 Score: 211 bits (537), Expect = 6.32e-69
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60
           MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG
Sbjct: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112
           RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS
Sbjct: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112

[Close]

BLAST of MC01g1335 vs. ExPASy TrEMBL
Match: A0A6J1KP23 (uncharacterized protein LOC111497408 OS=Cucurbita maxima OX=3661 GN=LOC111497408 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 2.76e-54
Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60
           MSF+L++  NGYSKVDKEDPEEIIHRRAQF+INKVLERA+SMGK SYLRIRIRRL+VRFG
Sbjct: 1   MSFVLVKSSNGYSKVDKEDPEEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60

Query: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112
           RRLKKLKKSA+ASI   KI VYKQ+I Q+RNCKSLFGRKE   ANL P LSS
Sbjct: 61  RRLKKLKKSAMASICNVKISVYKQIICQIRNCKSLFGRKETNFANLPPLLSS 112

[Close]

BLAST of MC01g1335 vs. ExPASy TrEMBL
Match: A0A0A0KJX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514800 PE=4 SV=1)

HSP 1 Score: 172 bits (436), Expect = 1.59e-53
Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 0


Query: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60
           MS +L +R NGY KVDKEDPEEIIHRRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFG
Sbjct: 1   MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112
           RRLK+LKKSA+ SIS  KIGVYKQVI Q+RNCKSLFGRK+   AN    LSS
Sbjct: 61  RRLKRLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQTNFANFPVLLSS 112

[Close]

BLAST of MC01g1335 vs. ExPASy TrEMBL
Match: A0A5D3CMA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006550 PE=4 SV=1)

HSP 1 Score: 171 bits (433), Expect = 4.57e-53
Identity = 90/112 (80.36%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60
           MSF+L +RPNGY KVDKEDPEEII RRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFG
Sbjct: 1   MSFVLTKRPNGYCKVDKEDPEEIIRRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112
           +RLKKLKKSA+ASIS  K+GVYKQVI Q+RN KSLFGRK+   AN    LSS
Sbjct: 61  KRLKKLKKSAMASISTLKVGVYKQVITQIRNYKSLFGRKQTKFANFPVLLSS 112

[Close]

BLAST of MC01g1335 vs. ExPASy TrEMBL
Match: A0A1S3B0N9 (uncharacterized protein LOC103484604 OS=Cucumis melo OX=3656 GN=LOC103484604 PE=4 SV=1)

HSP 1 Score: 171 bits (433), Expect = 4.57e-53
Identity = 90/112 (80.36%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60
           MSF+L +RPNGY KVDKEDPEEII RRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFG
Sbjct: 1   MSFVLTKRPNGYCKVDKEDPEEIIRRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFLSS 112
           +RLKKLKKSA+ASIS  K+GVYKQVI Q+RN KSLFGRK+   AN    LSS
Sbjct: 61  KRLKKLKKSAMASISTLKVGVYKQVITQIRNYKSLFGRKQTKFANFPVLLSS 112

[Close]

BLAST of MC01g1335 vs. TAIR 10
Match: AT1G11655.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 3.8e-12
Identity = 38/96 (39.58%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 5  LIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGK----PSYLRIRIRRLKVRFG 64
          L +RP  YSK+DKEDPEE++ RRA+FLI K L+ A+ + +     S++R+++  LKV+ G
Sbjct: 3  LFKRPCLYSKMDKEDPEEVLSRRAKFLIYKTLQEADLISRRDPHSSFIRLKLYLLKVKIG 62

Query: 65 RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLF 97
          +RL KL++S ++++     G+ K     +R  K +F
Sbjct: 63 KRLAKLRRSVVSAVRFG--GIRKHSHNGVRALKKMF 96

[Close]

BLAST of MC01g1335 vs. TAIR 10
Match: AT4G04745.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-11
Identity = 42/123 (34.15%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLR---------IR 60
           M+ ++   P  Y+K++KEDP+E+IHRRAQFLI KVLERA+S  +    R         IR
Sbjct: 26  MALMVKNSPYEYTKMEKEDPQELIHRRAQFLIQKVLERADSKTRQHQQRRRSSGPLIMIR 85

Query: 61  IRRLKVRFGRRLKKLKKSALA---SISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSP 112
           +  +++R G++L+KL+K+      ++    +  +K+ +     C S       TI++L P
Sbjct: 86  VVGIRMRIGKKLRKLRKTNTCICNNLITRFLKSFKRFL-----CSSSSSSSSRTISDLPP 143

[Close]

BLAST of MC01g1335 vs. TAIR 10
Match: AT4G21902.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04745.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 8.6e-09
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 5  LIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERA------ESMGKPSYLRI---RIRRL 64
          +++ PN Y+K++KED  EIIHRRAQFLI+K+L+RA      +   + + +++   R+  +
Sbjct: 3  MMKNPNQYTKIEKEDLNEIIHRRAQFLIHKILQRADIETLRQQQKRNTTIKLFSFRVVGI 62

Query: 65 KVRFGRRLKKLKKSAL 72
          +++ G++L+KL+KS +
Sbjct: 63 RMKIGKKLRKLRKSCV 78

The following BLAST results are available for this feature:

BLAST of MC01g1335 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g1335 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142336.1	1.30e-68	100.00	uncharacterized protein LOC111012478 [Momordica charantia]	[more]
XP_038883675.1	2.07e-56	84.82	uncharacterized protein LOC120074584 [Benincasa hispida]	[more]
XP_023003962.1	5.69e-54	80.36	uncharacterized protein LOC111497408 [Cucurbita maxima]	[more]
KGN49119.1	3.29e-53	80.36	hypothetical protein Csa_003853 [Cucumis sativus]	[more]
XP_008439979.1	9.44e-53	80.36	PREDICTED: uncharacterized protein LOC103484604 [Cucumis melo] >TYK13053.1 uncha...	[more]

BLAST of MC01g1335 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLW2	6.32e-69	100.00	uncharacterized protein LOC111012478 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1KP23	2.76e-54	80.36	uncharacterized protein LOC111497408 OS=Cucurbita maxima OX=3661 GN=LOC111497408...	[more]
A0A0A0KJX3	1.59e-53	80.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514800 PE=4 SV=1	[more]
A0A5D3CMA4	4.57e-53	80.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B0N9	4.57e-53	80.36	uncharacterized protein LOC103484604 OS=Cucumis melo OX=3656 GN=LOC103484604 PE=...	[more]

BLAST of MC01g1335 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11655.1	3.8e-12	39.58	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G04745.1	1.9e-11	34.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G21902.1	8.6e-09	38.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35687:SF1	OS07G0516700 PROTEIN	coord: 4..102
None	No IPR available	PANTHER	PTHR35687	OS07G0516700 PROTEIN	coord: 4..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1335.1	MC01g1335.1	mRNA