MC01g1304 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1304
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	chaperonin-like RBCX protein 1, chloroplastic
Location	MC01: 17869188 .. 17870510 (-)
RNA-Seq Expression	MC01g1304
Synteny	MC01g1304

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTATTACCACGCGAAAGGCGAAACATAATAACATATTTAATCAAGTTAGTGAAAATAGAAAACGATGTGTCGTTTGAGCATACTTGGTGAGAATTACACGTGTCGTAGACACCACAAGGAGATTTTAACAGCCAAGATATTTCCAATTTTTACATGAAGGCATTAGAGTTAGAGGAAGAGCTCTCTTTCCCTGGTTTCAGTTTTCTTCTGAAGCAATTTGATAGAGCTTAAGATTATCCATGGAATCGTCTGCAAGGGTTCTCTCCCCGACTCAATTTCCTTCTCTTTTTCCATTACCCAATTTAAATAGAAGCAGAGTTTTCCCACTCTGGCCAACGAAGCCGAAAGCCTCTAAGTTTACTCGCTTACAGTTACAATGCCATAAGATGTATGTTCCCGGTGGGTTCTCTCTCTCTCTCTGTGTTTCTGTTTTGGTACAGAAATTTTTGTTCGTTTGTTCATTTATTTTCGAATTTAGGGTTTGGAGAAGCGTCACCAGAAGCGAAGGCGGCCAAAAATCTGCACAATTTCTTCACGTATGTTGCTGTTAGGATCGTAATTGCGCAGCTTGAGGTTTTTCTTCAATTGCCTTTTTAAGTTGCTCTGCCATGTTGTTGTGTGCGTTTCCATTGGTATTGACTCTGGTTCTGGTAGAGCAGAGCTATAATCCAGAGGCACACGTGGAGTTAATGGAGTTTCTTGATAGACATTCACTGAATGATGGGGACAAGTTCCTGGCCAGTTTGATGCGCGAATCGTCTAGGCATAAGAGTCTTGGTAAAGCCCAAATCACCTCTTTTTCTGTCGATTGCCATAAAAAATGGACTTATTAGGAACATGTATAAAATAGATTCTTAGGAGAATACAGAAAGAGGAACGAATTGCATAATCTTCATTCAGATGAAGAAAAATGAAGTTTATTGTTGATCGACTTTCATGTTTGTGTTTGACTCTCATGTCTTTGTTCGTGATCGAACTCTTTGCTGGGGCAGCATTGCGCATACTAGAGGTGAGTTCTGTACTGCACACTTGAAAGTTGATTATTAATGCTCCCTTCTGTGGAAAACACTCATAAGCAGGCAAATCATTGATTCCAGGTTCGATCTGCATACTGCAAAAACGATTTTGAGTGGGACAACCTCAAGCGATTAGCATCCAAAGTAAGAAAACTAGTCTCTTTCTCTAGTAGTATCCTTAACAGAACTATGGTTGGTTGTTTGCTACCCTTCTGAGATTCATTATTTTCAGATGGCGAGTGAATCCAACACGAGATTGATGAGGGAATATGTGACAGAGACGAGTCCATCGGAAACTGAGAAG

mRNA sequence

GTTTTATTACCACGCGAAAGGCGAAACATAATAACATATTTAATCAAGTTAGTGAAAATAGAAAACGATGTGTCGTTTGAGCATACTTGGTGAGAATTACACGTGTCGTAGACACCACAAGGAGATTTTAACAGCCAAGATATTTCCAATTTTTACATGAAGGCATTAGAGTTAGAGGAAGAGCTCTCTTTCCCTGGTTTCAGTTTTCTTCTGAAGCAATTTGATAGAGCTTAAGATTATCCATGGAATCGTCTGCAAGGGTTCTCTCCCCGACTCAATTTCCTTCTCTTTTTCCATTACCCAATTTAAATAGAAGCAGAGTTTTCCCACTCTGGCCAACGAAGCCGAAAGCCTCTAAGTTTACTCGCTTACAGTTACAATGCCATAAGATGTATGTTCCCGGGTTTGGAGAAGCGTCACCAGAAGCGAAGGCGGCCAAAAATCTGCACAATTTCTTCACGTATGTTGCTGTTAGGATCGTAATTGCGCAGCTTGAGAGCTATAATCCAGAGGCACACGTGGAGTTAATGGAGTTTCTTGATAGACATTCACTGAATGATGGGGACAAGTTCCTGGCCAGTTTGATGCGCGAATCGTCTAGGCATAAGAGTCTTGCATTGCGCATACTAGAGGTTCGATCTGCATACTGCAAAAACGATTTTGAGTGGGACAACCTCAAGCGATTAGCATCCAAAATGGCGAGTGAATCCAACACGAGATTGATGAGGGAATATGTGACAGAGACGAGTCCATCGGAAACTGAGAAG

Coding sequence (CDS)

ATGGAATCGTCTGCAAGGGTTCTCTCCCCGACTCAATTTCCTTCTCTTTTTCCATTACCCAATTTAAATAGAAGCAGAGTTTTCCCACTCTGGCCAACGAAGCCGAAAGCCTCTAAGTTTACTCGCTTACAGTTACAATGCCATAAGATGTATGTTCCCGGGTTTGGAGAAGCGTCACCAGAAGCGAAGGCGGCCAAAAATCTGCACAATTTCTTCACGTATGTTGCTGTTAGGATCGTAATTGCGCAGCTTGAGAGCTATAATCCAGAGGCACACGTGGAGTTAATGGAGTTTCTTGATAGACATTCACTGAATGATGGGGACAAGTTCCTGGCCAGTTTGATGCGCGAATCGTCTAGGCATAAGAGTCTTGCATTGCGCATACTAGAGGTTCGATCTGCATACTGCAAAAACGATTTTGAGTGGGACAACCTCAAGCGATTAGCATCCAAAATGGCGAGTGAATCCAACACGAGATTGATGAGGGAATATGTGACAGAGACGAGTCCATCGGAAACTGAGAAG

Protein sequence

MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETEK

Homology

[Close]

BLAST of MC01g1304 vs. ExPASy Swiss-Prot
Match: Q94AU9 (Chaperonin-like RBCX protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCX1 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.6e-52
Identity = 111/174 (63.79%), Postives = 132/174 (75.86%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           MESS+ +L  +    L P       R    +P    + K  + ++  +KMYVPGFGEASP
Sbjct: 1   MESSSSLLHHSYLSYLNPKFG---KRPLVSYPLMQSSRKCKQTRICSNKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           EAKAAK+LH+FFTYVAVRIV AQLESYNPEA++EL EFLD +S++DGDKF A+LMR SSR
Sbjct: 61  EAKAAKHLHDFFTYVAVRIVSAQLESYNPEAYMELREFLDTNSVSDGDKFCATLMRRSSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETE 175
           H +LALRILEVRSAYCKNDFEWDN+KRLA K   +SNTRLMREYV ETS  ET+
Sbjct: 121 HMNLALRILEVRSAYCKNDFEWDNMKRLAFKNVDDSNTRLMREYVLETSHVETD 171

[Close]

BLAST of MC01g1304 vs. ExPASy Swiss-Prot
Match: Q44177 (RuBisCO chaperone RbcX OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=rbcX PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.0e-05
Identity = 35/114 (30.70%), Postives = 59/114 (51.75%), Query Frame = 0


Query: 63  KAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSRHK 122
           + A  L ++ TY AVR++  QL   NP   + L EF  RH + + D +L ++M E   +K
Sbjct: 9   ETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMMLE---NK 68

Query: 123 SLALRILEVRSAYCKNDFEW-DNLKRLASKMASESNTRLMREYVTETSPSETEK 176
            L LRIL VR    +   E+   +     K ++ ++ R + E +T+   S T++
Sbjct: 69  ELVLRILTVRENLAEGVLEFLPEMVLSQIKQSNGNHRRSLLERLTQVDSSSTDQ 119

[Close]

BLAST of MC01g1304 vs. ExPASy Swiss-Prot
Match: Q8DIS6 (RuBisCO chaperone RbcX OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rbcX PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.0e-04
Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 63  KAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSRHK 122
           +  K L ++ TY AVR VI QL   +P   + L +F  + S+ DG+++L +L RE     
Sbjct: 9   QTTKTLISYLTYQAVRTVIGQLAETDPPRSLWLHQFTSQESIQDGERYLEALFRE---QP 68

Query: 123 SLALRILEVR 133
            L  RIL VR
Sbjct: 69  DLGFRILTVR 75

[Close]

BLAST of MC01g1304 vs. NCBI nr
Match: XP_022132911.1 (chaperonin-like RBCX protein 1, chloroplastic [Momordica charantia])

HSP 1 Score: 346 bits (887), Expect = 6.09e-120
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP
Sbjct: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR
Sbjct: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETEK 175
           HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETEK
Sbjct: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETEK 175

[Close]

BLAST of MC01g1304 vs. NCBI nr
Match: XP_038881664.1 (chaperonin-like RBCX protein 1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 301 bits (770), Expect = 3.91e-102
Identity = 154/175 (88.00%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           ME SAR+LS TQFPSLFPLPNLNRS VFP+WP KPKA+K  RL   C KMYVPGFGEASP
Sbjct: 1   MEPSARILSSTQFPSLFPLPNLNRSNVFPVWPKKPKATKSMRLH--CSKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           E+KAA+NLHNFFTYVAVRIV AQLESYNPEA+ ELMEFLDRHSLNDGDKFLASLMRESSR
Sbjct: 61  ESKAARNLHNFFTYVAVRIVTAQLESYNPEAYQELMEFLDRHSLNDGDKFLASLMRESSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETEK 175
           HKSLALRILEVRSAYCKNDFEWDNLKRLA KM SESNTRLMREYVTETSPS+TEK
Sbjct: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRLMREYVTETSPSDTEK 173

[Close]

BLAST of MC01g1304 vs. NCBI nr
Match: XP_023003335.1 (chaperonin-like RBCX protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 298 bits (763), Expect = 4.41e-101
Identity = 150/170 (88.24%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           MES AR+LSPT FPSLFPLPNLNRS   P+WP KP+ASK   L+L CHKMYVPGFGEASP
Sbjct: 1   MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASK--SLRLHCHKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           EAKAAKNLHNFFTYVAVRIV AQLESYNPEAH ELMEFLDRHSLNDGDKFL++LMRESSR
Sbjct: 61  EAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSP 170
           HKSLALRILEVRSAYCKNDFEWDNLKRLASKM  ESNTRLMREYVTETSP
Sbjct: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSP 168

[Close]

BLAST of MC01g1304 vs. NCBI nr
Match: XP_023518339.1 (chaperonin-like RBCX protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295 bits (755), Expect = 7.31e-100
Identity = 148/170 (87.06%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           MES AR+LSPT FPS+FPLPNLNR    P+WP KP+ASK   L+L CHKMYVPGFGEASP
Sbjct: 1   MESCARILSPTHFPSVFPLPNLNRRNFNPVWPRKPEASK--SLRLHCHKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           EAKAAKNLHNFFTYVAVRIV AQLESYNPEAH ELMEFLDRHSLNDGDKFL++LMRESSR
Sbjct: 61  EAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHAELMEFLDRHSLNDGDKFLSNLMRESSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSP 170
           HKSLALRILEVRSAYCKNDFEWDNLKRLASKM  ESNTRLMREYVTETSP
Sbjct: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSP 168

[Close]

BLAST of MC01g1304 vs. NCBI nr
Match: XP_022926897.1 (chaperonin-like RBCX protein 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 293 bits (749), Expect = 6.00e-99
Identity = 148/170 (87.06%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           MES AR+LSPT FPSLFP PNLNRS   P+WP K +ASK   L+L CHKMYVPGFGEASP
Sbjct: 1   MESCARILSPTHFPSLFPRPNLNRSNFNPVWPKKAEASK--SLRLHCHKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           EAKAAKNLHNFFTYVAVRIV AQLESYNPEAH ELMEFLDRHSLNDGDKFL++LMRESSR
Sbjct: 61  EAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHAELMEFLDRHSLNDGDKFLSNLMRESSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSP 170
           HKSLALRILEVRSAYCKNDFEWDNLKRLASKM  ESNTRLMREYVTETSP
Sbjct: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSP 168

[Close]

BLAST of MC01g1304 vs. ExPASy TrEMBL
Match: A0A6J1BTL5 (chaperonin-like RBCX protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005638 PE=4 SV=1)

HSP 1 Score: 346 bits (887), Expect = 2.95e-120
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP
Sbjct: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR
Sbjct: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETEK 175
           HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETEK
Sbjct: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETEK 175

[Close]

BLAST of MC01g1304 vs. ExPASy TrEMBL
Match: A0A6J1KRH1 (chaperonin-like RBCX protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111496972 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 2.14e-101
Identity = 150/170 (88.24%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           MES AR+LSPT FPSLFPLPNLNRS   P+WP KP+ASK   L+L CHKMYVPGFGEASP
Sbjct: 1   MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASK--SLRLHCHKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           EAKAAKNLHNFFTYVAVRIV AQLESYNPEAH ELMEFLDRHSLNDGDKFL++LMRESSR
Sbjct: 61  EAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSP 170
           HKSLALRILEVRSAYCKNDFEWDNLKRLASKM  ESNTRLMREYVTETSP
Sbjct: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSP 168

[Close]

BLAST of MC01g1304 vs. ExPASy TrEMBL
Match: A0A6J1EFL9 (chaperonin-like RBCX protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433874 PE=4 SV=1)

HSP 1 Score: 293 bits (749), Expect = 2.91e-99
Identity = 148/170 (87.06%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           MES AR+LSPT FPSLFP PNLNRS   P+WP K +ASK   L+L CHKMYVPGFGEASP
Sbjct: 1   MESCARILSPTHFPSLFPRPNLNRSNFNPVWPKKAEASK--SLRLHCHKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           EAKAAKNLHNFFTYVAVRIV AQLESYNPEAH ELMEFLDRHSLNDGDKFL++LMRESSR
Sbjct: 61  EAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHAELMEFLDRHSLNDGDKFLSNLMRESSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSP 170
           HKSLALRILEVRSAYCKNDFEWDNLKRLASKM  ESNTRLMREYVTETSP
Sbjct: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSP 168

[Close]

BLAST of MC01g1304 vs. ExPASy TrEMBL
Match: A0A5D3CNU4 (Chaperonin-like RBCX protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006230 PE=4 SV=1)

HSP 1 Score: 293 bits (749), Expect = 3.01e-99
Identity = 149/175 (85.14%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           MESSAR+LSPTQFPS+F LPNLNR  VFP+ P KP+ASK  RL   C KMYVPGFGEASP
Sbjct: 1   MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLH--CSKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           E+KAA+NLHNFFTYVAVRIV AQLESYNPEA++ELMEFLDRHSLNDGDKFLASLMRESSR
Sbjct: 61  ESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETEK 175
           HKSLALRILEVRSAYCKNDFEWDNLKRLA KM  ESNTR+MREY+TETSPS+TEK
Sbjct: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK 173

[Close]

BLAST of MC01g1304 vs. ExPASy TrEMBL
Match: A0A1S3B054 (uncharacterized protein LOC103484635 OS=Cucumis melo OX=3656 GN=LOC103484635 PE=4 SV=1)

HSP 1 Score: 293 bits (749), Expect = 3.01e-99
Identity = 149/175 (85.14%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           MESSAR+LSPTQFPS+F LPNLNR  VFP+ P KP+ASK  RL   C KMYVPGFGEASP
Sbjct: 1   MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLH--CSKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           E+KAA+NLHNFFTYVAVRIV AQLESYNPEA++ELMEFLDRHSLNDGDKFLASLMRESSR
Sbjct: 61  ESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETEK 175
           HKSLALRILEVRSAYCKNDFEWDNLKRLA KM  ESNTR+MREY+TETSPS+TEK
Sbjct: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK 173

[Close]

BLAST of MC01g1304 vs. TAIR 10
Match: AT4G04330.1 (Chaperonin-like RbcX protein )

HSP 1 Score: 205.3 bits (521), Expect = 4.0e-53
Identity = 111/174 (63.79%), Postives = 132/174 (75.86%), Query Frame = 0


Query: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60
           MESS+ +L  +    L P       R    +P    + K  + ++  +KMYVPGFGEASP
Sbjct: 1   MESSSSLLHHSYLSYLNPKFG---KRPLVSYPLMQSSRKCKQTRICSNKMYVPGFGEASP 60

Query: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120
           EAKAAK+LH+FFTYVAVRIV AQLESYNPEA++EL EFLD +S++DGDKF A+LMR SSR
Sbjct: 61  EAKAAKHLHDFFTYVAVRIVSAQLESYNPEAYMELREFLDTNSVSDGDKFCATLMRRSSR 120

Query: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKMASESNTRLMREYVTETSPSETE 175
           H +LALRILEVRSAYCKNDFEWDN+KRLA K   +SNTRLMREYV ETS  ET+
Sbjct: 121 HMNLALRILEVRSAYCKNDFEWDNMKRLAFKNVDDSNTRLMREYVLETSHVETD 171

[Close]

BLAST of MC01g1304 vs. TAIR 10
Match: AT5G19855.1 (Chaperonin-like RbcX protein )

HSP 1 Score: 42.0 bits (97), Expect = 5.9e-04
Identity = 36/104 (34.62%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 66  KNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSRHKSLA 125
           K + N+FTY AVR V+ QL   NP  +      +  +   DG +FL +L +ES   + LA
Sbjct: 94  KQIVNYFTYKAVRTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKES---QELA 153

Query: 126 LRILEVR-SAYCKNDFEWDNLKRLASKMASESNTRLMREYVTET 169
            R++  R   Y K   + D+ K    +  S+ N  LMRE + ET
Sbjct: 154 ERVMITRLHLYGKWIKKCDHGK--IYQEISDENLALMRERLMET 192

The following BLAST results are available for this feature:

BLAST of MC01g1304 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AU9	5.6e-52	63.79	Chaperonin-like RBCX protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q44177	4.0e-05	30.70	RuBisCO chaperone RbcX OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6...	[more]
Q8DIS6	2.0e-04	38.57	RuBisCO chaperone RbcX OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 ...	[more]

BLAST of MC01g1304 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132911.1	6.09e-120	100.00	chaperonin-like RBCX protein 1, chloroplastic [Momordica charantia]	[more]
XP_038881664.1	3.91e-102	88.00	chaperonin-like RBCX protein 1, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_023003335.1	4.41e-101	88.24	chaperonin-like RBCX protein 1, chloroplastic [Cucurbita maxima]	[more]
XP_023518339.1	7.31e-100	87.06	chaperonin-like RBCX protein 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022926897.1	6.00e-99	87.06	chaperonin-like RBCX protein 1, chloroplastic [Cucurbita moschata]	[more]

BLAST of MC01g1304 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BTL5	2.95e-120	100.00	chaperonin-like RBCX protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1KRH1	2.14e-101	88.24	chaperonin-like RBCX protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EFL9	2.91e-99	87.06	chaperonin-like RBCX protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3CNU4	3.01e-99	85.14	Chaperonin-like RBCX protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B054	3.01e-99	85.14	uncharacterized protein LOC103484635 OS=Cucumis melo OX=3656 GN=LOC103484635 PE=...	[more]

BLAST of MC01g1304 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04330.1	4.0e-53	63.79	Chaperonin-like RbcX protein	[more]
AT5G19855.1	5.9e-04	34.62	Chaperonin-like RbcX protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003435	Chaperonin-like RbcX	PFAM	PF02341	RcbX	coord: 63..168 e-value: 1.9E-32 score: 111.8
IPR003435	Chaperonin-like RbcX	PANTHER	PTHR33791	FAMILY NOT NAMED	coord: 1..175
IPR038052	Chaperonin-like RbcX superfamily	GENE3D	1.10.1200.210		coord: 50..175 e-value: 1.2E-54 score: 185.8
IPR038052	Chaperonin-like RbcX superfamily	SUPERFAMILY	158615	RbcX-like	coord: 57..173
None	No IPR available	PANTHER	PTHR33791:SF12	CHAPERONIN-LIKE RBCX PROTEIN 1, CHLOROPLASTIC	coord: 1..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1304.1	MC01g1304.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015977	carbon fixation
biological_process	GO:0061077	chaperone-mediated protein folding
biological_process	GO:0006270	DNA replication initiation
biological_process	GO:0033314	mitotic DNA replication checkpoint signaling
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009409	response to cold
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0110102	ribulose bisphosphate carboxylase complex assembly
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005664	nuclear origin of replication recognition complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003688	DNA replication origin binding
molecular_function	GO:0044183	protein folding chaperone