Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCGGATTGACGATCTACCATATTCTAGGCCACAGAAGCAGAAAGCTTCACACCAGAAAGCTTCCACAGCATCTCATTTACAAGGGAAAGAAATCGATCGAGTAAAGGGGTCTTTTCCAGCACAAACAGTACAAAAATCCTCCAAAAGAAGTTTGAAGAATGAACCATCAGTAGCATTTCAGCAGCCAGAAAGATCAAATTCGGATTCTTTGCCAGATTCTTCTGCATCTGGGAACGAGTACCGAGCCTTGAGAAGAAAATATTTGCTCCTGGAGGAAGAGAGTTTTGCTTTGGGATCAGAACTGAAAGAAGTGGAAGATGAGGTAAAGACCCTTGAAGAAGAGAAGCTCGGTCTCTTGGATGAACTCCTTGTTTTAGAAGGACTGATCGATCGTTCAGAGTTGCAGCCGCCCACCCAGCCACATTTACCACAACTT
mRNA sequence
ATGTCTCGGATTGACGATCTACCATATTCTAGGCCACAGAAGCAGAAAGCTTCACACCAGAAAGCTTCCACAGCATCTCATTTACAAGGGAAAGAAATCGATCGAGTAAAGGGGTCTTTTCCAGCACAAACAGTACAAAAATCCTCCAAAAGAAGTTTGAAGAATGAACCATCAGTAGCATTTCAGCAGCCAGAAAGATCAAATTCGGATTCTTTGCCAGATTCTTCTGCATCTGGGAACGAGTACCGAGCCTTGAGAAGAAAATATTTGCTCCTGGAGGAAGAGAGTTTTGCTTTGGGATCAGAACTGAAAGAAGTGGAAGATGAGGTAAAGACCCTTGAAGAAGAGAAGCTCGGTCTCTTGGATGAACTCCTTGTTTTAGAAGGACTGATCGATCGTTCAGAGTTGCAGCCGCCCACCCAGCCACATTTACCACAACTT
Coding sequence (CDS)
ATGTCTCGGATTGACGATCTACCATATTCTAGGCCACAGAAGCAGAAAGCTTCACACCAGAAAGCTTCCACAGCATCTCATTTACAAGGGAAAGAAATCGATCGAGTAAAGGGGTCTTTTCCAGCACAAACAGTACAAAAATCCTCCAAAAGAAGTTTGAAGAATGAACCATCAGTAGCATTTCAGCAGCCAGAAAGATCAAATTCGGATTCTTTGCCAGATTCTTCTGCATCTGGGAACGAGTACCGAGCCTTGAGAAGAAAATATTTGCTCCTGGAGGAAGAGAGTTTTGCTTTGGGATCAGAACTGAAAGAAGTGGAAGATGAGGTAAAGACCCTTGAAGAAGAGAAGCTCGGTCTCTTGGATGAACTCCTTGTTTTAGAAGGACTGATCGATCGTTCAGAGTTGCAGCCGCCCACCCAGCCACATTTACCACAACTT
Protein sequence
MSRIDDLPYSRPQKQKASHQKASTASHLQGKEIDRVKGSFPAQTVQKSSKRSLKNEPSVAFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFALGSELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQPPTQPHLPQL
Homology
BLAST of MC01g1246 vs. NCBI nr
Match:
XP_023545100.1 (uncharacterized protein LOC111804503 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 225 bits (574), Expect = 4.03e-73
Identity = 127/139 (91.37%), Postives = 131/139 (94.24%), Query Frame = 0
Query: 1 MSRIDDLPYSRPQKQKASHQKASTASHLQGKEI-DRVKGSFPAQTVQKSSKRSLKNEPSV 60
MSRIDDLPYSRP KQKASHQKASTASHLQGK+ DR+KGSFPAQT QKSSKRSLKNEPSV
Sbjct: 1 MSRIDDLPYSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTPQKSSKRSLKNEPSV 60
Query: 61 AFQQPERSNSDSLPDSS-ASGNEYRALRRKYLLLEEESFALGSELKEVEDEVKTLEEEKL 120
A QQPERSNSDSLPDSS ASGNEYR LRRKYLLLEEESF+LG+ELKEVEDEVK LEEEKL
Sbjct: 61 ALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKL 120
Query: 121 GLLDELLVLEGLIDRSELQ 137
GLLDELLVLEGLIDRSELQ
Sbjct: 121 GLLDELLVLEGLIDRSELQ 139
BLAST of MC01g1246 vs. NCBI nr
Match:
XP_011658091.1 (uncharacterized protein LOC101212199 [Cucumis sativus] >KGN49006.1 hypothetical protein Csa_003830 [Cucumis sativus])
HSP 1 Score: 224 bits (572), Expect = 7.86e-73
Identity = 124/138 (89.86%), Postives = 130/138 (94.20%), Query Frame = 0
Query: 1 MSRIDDLPYSRPQKQKASHQKASTASHLQGKE-IDRVKGSFPAQTVQKSSKRSLKNEPSV 60
MSRIDDLPYSRP KQKA HQKASTASH+Q K+ DR+KGSFPAQT QK+SKRSLKNEPSV
Sbjct: 1 MSRIDDLPYSRPPKQKALHQKASTASHVQVKDPSDRIKGSFPAQTAQKASKRSLKNEPSV 60
Query: 61 AFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFALGSELKEVEDEVKTLEEEKLG 120
FQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESF+LG+ELK VEDEVKTLEEEKLG
Sbjct: 61 VFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFSLGAELKGVEDEVKTLEEEKLG 120
Query: 121 LLDELLVLEGLIDRSELQ 137
LLDELLVLEGLIDRSELQ
Sbjct: 121 LLDELLVLEGLIDRSELQ 138
BLAST of MC01g1246 vs. NCBI nr
Match:
XP_022950616.1 (uncharacterized protein LOC111453661 [Cucurbita moschata])
HSP 1 Score: 224 bits (572), Expect = 8.12e-73
Identity = 126/139 (90.65%), Postives = 131/139 (94.24%), Query Frame = 0
Query: 1 MSRIDDLPYSRPQKQKASHQKASTASHLQGKEI-DRVKGSFPAQTVQKSSKRSLKNEPSV 60
MSRIDDLP+SRP KQKASHQKASTASHLQGK+ DR+KGSFPAQT QKSSKRSLKNEPSV
Sbjct: 1 MSRIDDLPFSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTAQKSSKRSLKNEPSV 60
Query: 61 AFQQPERSNSDSLPDSS-ASGNEYRALRRKYLLLEEESFALGSELKEVEDEVKTLEEEKL 120
A QQPERSNSDSLPDSS ASGNEYR LRRKYLLLEEESF+LG+ELKEVEDEVK LEEEKL
Sbjct: 61 ALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKL 120
Query: 121 GLLDELLVLEGLIDRSELQ 137
GLLDELLVLEGLIDRSELQ
Sbjct: 121 GLLDELLVLEGLIDRSELQ 139
BLAST of MC01g1246 vs. NCBI nr
Match:
KAG7034032.1 (hypothetical protein SDJN02_03758, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 224 bits (571), Expect = 1.15e-72
Identity = 126/139 (90.65%), Postives = 130/139 (93.53%), Query Frame = 0
Query: 1 MSRIDDLPYSRPQKQKASHQKASTASHLQGKEI-DRVKGSFPAQTVQKSSKRSLKNEPSV 60
MSRIDDLPYSRP KQKASHQKASTASHLQGK+ DR+KGSFPAQT QKSSKRSL NEPSV
Sbjct: 1 MSRIDDLPYSRPSKQKASHQKASTASHLQGKDPNDRIKGSFPAQTTQKSSKRSLTNEPSV 60
Query: 61 AFQQPERSNSDSLPDSS-ASGNEYRALRRKYLLLEEESFALGSELKEVEDEVKTLEEEKL 120
A QQPERSNSDSLPDSS ASGNEYR LRRKYLLLEEESF+LG+ELKEVEDEVK LEEEKL
Sbjct: 61 ALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKL 120
Query: 121 GLLDELLVLEGLIDRSELQ 137
GLLDELLVLEGLIDRSELQ
Sbjct: 121 GLLDELLVLEGLIDRSELQ 139
BLAST of MC01g1246 vs. NCBI nr
Match:
XP_022978374.1 (uncharacterized protein LOC111478385 [Cucurbita maxima])
HSP 1 Score: 224 bits (570), Expect = 1.64e-72
Identity = 126/139 (90.65%), Postives = 130/139 (93.53%), Query Frame = 0
Query: 1 MSRIDDLPYSRPQKQKASHQKASTASHLQGKEI-DRVKGSFPAQTVQKSSKRSLKNEPSV 60
MSRIDDLPYSRP KQKASH KASTASHLQGK+ DR+KGSFPAQT QKSSKRSLKNEPSV
Sbjct: 1 MSRIDDLPYSRPPKQKASHPKASTASHLQGKDPNDRIKGSFPAQTTQKSSKRSLKNEPSV 60
Query: 61 AFQQPERSNSDSLPDSS-ASGNEYRALRRKYLLLEEESFALGSELKEVEDEVKTLEEEKL 120
A QQPERSNSDSLPDSS ASGNEYR LRRKYLLLEEESF+LG+ELKEVEDEVK LEEEKL
Sbjct: 61 ALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKL 120
Query: 121 GLLDELLVLEGLIDRSELQ 137
GLLDELLVLEGLIDRSELQ
Sbjct: 121 GLLDELLVLEGLIDRSELQ 139
BLAST of MC01g1246 vs. ExPASy TrEMBL
Match:
A0A0A0KMU4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510240 PE=4 SV=1)
HSP 1 Score: 224 bits (572), Expect = 3.80e-73
Identity = 124/138 (89.86%), Postives = 130/138 (94.20%), Query Frame = 0
Query: 1 MSRIDDLPYSRPQKQKASHQKASTASHLQGKE-IDRVKGSFPAQTVQKSSKRSLKNEPSV 60
MSRIDDLPYSRP KQKA HQKASTASH+Q K+ DR+KGSFPAQT QK+SKRSLKNEPSV
Sbjct: 1 MSRIDDLPYSRPPKQKALHQKASTASHVQVKDPSDRIKGSFPAQTAQKASKRSLKNEPSV 60
Query: 61 AFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFALGSELKEVEDEVKTLEEEKLG 120
FQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESF+LG+ELK VEDEVKTLEEEKLG
Sbjct: 61 VFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFSLGAELKGVEDEVKTLEEEKLG 120
Query: 121 LLDELLVLEGLIDRSELQ 137
LLDELLVLEGLIDRSELQ
Sbjct: 121 LLDELLVLEGLIDRSELQ 138
BLAST of MC01g1246 vs. ExPASy TrEMBL
Match:
A0A6J1GFB4 (uncharacterized protein LOC111453661 OS=Cucurbita moschata OX=3662 GN=LOC111453661 PE=4 SV=1)
HSP 1 Score: 224 bits (572), Expect = 3.93e-73
Identity = 126/139 (90.65%), Postives = 131/139 (94.24%), Query Frame = 0
Query: 1 MSRIDDLPYSRPQKQKASHQKASTASHLQGKEI-DRVKGSFPAQTVQKSSKRSLKNEPSV 60
MSRIDDLP+SRP KQKASHQKASTASHLQGK+ DR+KGSFPAQT QKSSKRSLKNEPSV
Sbjct: 1 MSRIDDLPFSRPPKQKASHQKASTASHLQGKDPNDRIKGSFPAQTAQKSSKRSLKNEPSV 60
Query: 61 AFQQPERSNSDSLPDSS-ASGNEYRALRRKYLLLEEESFALGSELKEVEDEVKTLEEEKL 120
A QQPERSNSDSLPDSS ASGNEYR LRRKYLLLEEESF+LG+ELKEVEDEVK LEEEKL
Sbjct: 61 ALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKL 120
Query: 121 GLLDELLVLEGLIDRSELQ 137
GLLDELLVLEGLIDRSELQ
Sbjct: 121 GLLDELLVLEGLIDRSELQ 139
BLAST of MC01g1246 vs. ExPASy TrEMBL
Match:
A0A6J1ITW9 (uncharacterized protein LOC111478385 OS=Cucurbita maxima OX=3661 GN=LOC111478385 PE=4 SV=1)
HSP 1 Score: 224 bits (570), Expect = 7.93e-73
Identity = 126/139 (90.65%), Postives = 130/139 (93.53%), Query Frame = 0
Query: 1 MSRIDDLPYSRPQKQKASHQKASTASHLQGKEI-DRVKGSFPAQTVQKSSKRSLKNEPSV 60
MSRIDDLPYSRP KQKASH KASTASHLQGK+ DR+KGSFPAQT QKSSKRSLKNEPSV
Sbjct: 1 MSRIDDLPYSRPPKQKASHPKASTASHLQGKDPNDRIKGSFPAQTTQKSSKRSLKNEPSV 60
Query: 61 AFQQPERSNSDSLPDSS-ASGNEYRALRRKYLLLEEESFALGSELKEVEDEVKTLEEEKL 120
A QQPERSNSDSLPDSS ASGNEYR LRRKYLLLEEESF+LG+ELKEVEDEVK LEEEKL
Sbjct: 61 ALQQPERSNSDSLPDSSSASGNEYRVLRRKYLLLEEESFSLGTELKEVEDEVKALEEEKL 120
Query: 121 GLLDELLVLEGLIDRSELQ 137
GLLDELLVLEGLIDRSELQ
Sbjct: 121 GLLDELLVLEGLIDRSELQ 139
BLAST of MC01g1246 vs. ExPASy TrEMBL
Match:
A0A5D3CLN1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00520 PE=4 SV=1)
HSP 1 Score: 221 bits (562), Expect = 1.31e-71
Identity = 124/139 (89.21%), Postives = 130/139 (93.53%), Query Frame = 0
Query: 1 MSRIDDLPYSRPQKQKASHQKASTASHLQGKE-IDRVKGSFPAQTVQKSSKRSLKNEPSV 60
MSRIDDLPYSRP KQKA HQKASTASHLQ K+ +R+KGSFPAQT QK+SKRSLKNEPS+
Sbjct: 1 MSRIDDLPYSRPPKQKALHQKASTASHLQLKDPSNRIKGSFPAQTAQKASKRSLKNEPSI 60
Query: 61 AFQQPERSNSDSLPDSS-ASGNEYRALRRKYLLLEEESFALGSELKEVEDEVKTLEEEKL 120
FQQPERSNSDSLPDSS ASGNEYRALRRKYLLLEEESF LG+ELKEVEDEVKTLEEEKL
Sbjct: 61 VFQQPERSNSDSLPDSSSASGNEYRALRRKYLLLEEESFTLGAELKEVEDEVKTLEEEKL 120
Query: 121 GLLDELLVLEGLIDRSELQ 137
GLLDELLVLEGLIDRSELQ
Sbjct: 121 GLLDELLVLEGLIDRSELQ 139
BLAST of MC01g1246 vs. ExPASy TrEMBL
Match:
A0A1S4DU11 (uncharacterized protein LOC103485204 OS=Cucumis melo OX=3656 GN=LOC103485204 PE=4 SV=1)
HSP 1 Score: 221 bits (562), Expect = 1.31e-71
Identity = 124/139 (89.21%), Postives = 130/139 (93.53%), Query Frame = 0
Query: 1 MSRIDDLPYSRPQKQKASHQKASTASHLQGKE-IDRVKGSFPAQTVQKSSKRSLKNEPSV 60
MSRIDDLPYSRP KQKA HQKASTASHLQ K+ +R+KGSFPAQT QK+SKRSLKNEPS+
Sbjct: 1 MSRIDDLPYSRPPKQKALHQKASTASHLQLKDPSNRIKGSFPAQTAQKASKRSLKNEPSI 60
Query: 61 AFQQPERSNSDSLPDSS-ASGNEYRALRRKYLLLEEESFALGSELKEVEDEVKTLEEEKL 120
FQQPERSNSDSLPDSS ASGNEYRALRRKYLLLEEESF LG+ELKEVEDEVKTLEEEKL
Sbjct: 61 VFQQPERSNSDSLPDSSSASGNEYRALRRKYLLLEEESFTLGAELKEVEDEVKTLEEEKL 120
Query: 121 GLLDELLVLEGLIDRSELQ 137
GLLDELLVLEGLIDRSELQ
Sbjct: 121 GLLDELLVLEGLIDRSELQ 139
BLAST of MC01g1246 vs. TAIR 10
Match:
AT3G51500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 89.7 bits (221), Expect = 2.1e-18
Identity = 57/93 (61.29%), Postives = 66/93 (70.97%), Query Frame = 0
Query: 41 PAQTVQKSSKRSLKNEPSVAFQQPERS-NSDSLPDSSASGNEYRALRRKYLLLEEESFAL 100
P + +K S RS N+ Q E S NSDS P GNEYRALRRKYLLLEE+SFAL
Sbjct: 28 PPRIGKKVSNRSKSNQVHAISHQLEMSPNSDSSP-----GNEYRALRRKYLLLEEDSFAL 87
Query: 101 GSELKEVEDEVKTLEEEKLGLLDELLVLEGLID 133
ELKE EDEVK LE+EKL LLD+L+V+EGL+D
Sbjct: 88 ERELKEAEDEVKALEDEKLELLDKLVVMEGLVD 115
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023545100.1 | 4.03e-73 | 91.37 | uncharacterized protein LOC111804503 [Cucurbita pepo subsp. pepo] | [more] |
XP_011658091.1 | 7.86e-73 | 89.86 | uncharacterized protein LOC101212199 [Cucumis sativus] >KGN49006.1 hypothetical ... | [more] |
XP_022950616.1 | 8.12e-73 | 90.65 | uncharacterized protein LOC111453661 [Cucurbita moschata] | [more] |
KAG7034032.1 | 1.15e-72 | 90.65 | hypothetical protein SDJN02_03758, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022978374.1 | 1.64e-72 | 90.65 | uncharacterized protein LOC111478385 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KMU4 | 3.80e-73 | 89.86 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510240 PE=4 SV=1 | [more] |
A0A6J1GFB4 | 3.93e-73 | 90.65 | uncharacterized protein LOC111453661 OS=Cucurbita moschata OX=3662 GN=LOC1114536... | [more] |
A0A6J1ITW9 | 7.93e-73 | 90.65 | uncharacterized protein LOC111478385 OS=Cucurbita maxima OX=3661 GN=LOC111478385... | [more] |
A0A5D3CLN1 | 1.31e-71 | 89.21 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S4DU11 | 1.31e-71 | 89.21 | uncharacterized protein LOC103485204 OS=Cucumis melo OX=3656 GN=LOC103485204 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT3G51500.1 | 2.1e-18 | 61.29 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |