MC01g1236 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1236
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	heterogeneous nuclear ribonucleoprotein H2 isoform X1
Location	MC01: 17414706 .. 17415476 (-)
RNA-Seq Expression	MC01g1236
Synteny	MC01g1236

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCCTGCCTTTCCTGTGGTTCGCCTTAGAGGACTTCCCTTTAACTGCACCGACATCGACATTTTCAAGTTCTTTGCTGGACTGGATATTGTGGATGTGTTGCTGGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGGTCCATGCAGGTTGAGTTCGCACTGCAGCGGGATCGACAGAATATGGGGCGTAGGTACGTAGAAGTCTTCAGGTGCAAAAGGCAGGATTATTATAATGCTGTTGCTGCTGAAGTAAATTATGAGGGCATCTATGATAATGACTACCATGGAAGCCCTCCTCCTCGGCAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACTGAGATACTGAAGCTGCGTGGTCTCCCCTTCTCTGTAACGAAATCCAACATCACTGAATTTTTTGGAGAGTTTGACCTCACAGAAGATAGGGTACATATTGCAAGTCGTCCAGATGGGAAGGCAACTGGTGAGGCATACGTGGAGTTTGCTTCAGCAGAGGAGGCAAAGAGAGCAATGAGCAAGGACAAGATGATGATTGGATCAAGATATGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCTAGAAGAGCTGAGTCAAGGTCAAGACAG

mRNA sequence

GCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCCTGCCTTTCCTGTGGTTCGCCTTAGAGGACTTCCCTTTAACTGCACCGACATCGACATTTTCAAGTTCTTTGCTGGACTGGATATTGTGGATGTGTTGCTGGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGGTCCATGCAGGTTGAGTTCGCACTGCAGCGGGATCGACAGAATATGGGGCGTAGGTACGTAGAAGTCTTCAGGTGCAAAAGGCAGGATTATTATAATGCTGTTGCTGCTGAAGTAAATTATGAGGGCATCTATGATAATGACTACCATGGAAGCCCTCCTCCTCGGCAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACTGAGATACTGAAGCTGCGTGGTCTCCCCTTCTCTGTAACGAAATCCAACATCACTGAATTTTTTGGAGAGTTTGACCTCACAGAAGATAGGGTACATATTGCAAGTCGTCCAGATGGGAAGGCAACTGGTGAGGCATACGTGGAGTTTGCTTCAGCAGAGGAGGCAAAGAGAGCAATGAGCAAGGACAAGATGATGATTGGATCAAGATATGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCTAGAAGAGCTGAGTCAAGGTCAAGACAG

Coding sequence (CDS)

GCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCCTGCCTTTCCTGTGGTTCGCCTTAGAGGACTTCCCTTTAACTGCACCGACATCGACATTTTCAAGTTCTTTGCTGGACTGGATATTGTGGATGTGTTGCTGGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGGTCCATGCAGGTTGAGTTCGCACTGCAGCGGGATCGACAGAATATGGGGCGTAGGTACGTAGAAGTCTTCAGGTGCAAAAGGCAGGATTATTATAATGCTGTTGCTGCTGAAGTAAATTATGAGGGCATCTATGATAATGACTACCATGGAAGCCCTCCTCCTCGGCAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACTGAGATACTGAAGCTGCGTGGTCTCCCCTTCTCTGTAACGAAATCCAACATCACTGAATTTTTTGGAGAGTTTGACCTCACAGAAGATAGGGTACATATTGCAAGTCGTCCAGATGGGAAGGCAACTGGTGAGGCATACGTGGAGTTTGCTTCAGCAGAGGAGGCAAAGAGAGCAATGAGCAAGGACAAGATGATGATTGGATCAAGATATGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCTAGAAGAGCTGAGTCAAGGTCAAGACAG

Protein sequence

AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

Homology

[Close]

BLAST of MC01g1236 vs. ExPASy Swiss-Prot
Match: Q3US41 (Epithelial splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Esrp1 PE=1 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25
Identity = 74/208 (35.58%), Postives = 110/208 (52.88%), Query Frame = 0


Query: 53  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSMQVEFALQR 112
           VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR
Sbjct: 225 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQR 284

Query: 113 DRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEI 172
            + +MG RY+EV++   +D+        N                  +F  K   E   I
Sbjct: 285 HKHHMGTRYIEVYKATGEDFLKIAGGTSN---------------EVAQFLSK---ENQVI 344

Query: 173 LKLRGLPFSVTKSNITEFFGEF-DLT--EDRVHIASRPDGKATGEAYVEFASAEEAKRAM 232
           +++RGLPF+ T   +  FFG+   +T  ++ +   + PDG+ TG+A+V FA  E A+ A+
Sbjct: 345 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 404

Query: 233 SKDKMMIGSRYVELFPSTPNEARRAESR 255
            K K ++G RY+ELF ST  E ++  +R
Sbjct: 405 RKHKELLGKRYIELFRSTAAEVQQVLNR 414

[Close]

BLAST of MC01g1236 vs. ExPASy Swiss-Prot
Match: Q6NXG1 (Epithelial splicing regulatory protein 1 OS=Homo sapiens OX=9606 GN=ESRP1 PE=1 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 74/208 (35.58%), Postives = 110/208 (52.88%), Query Frame = 0


Query: 53  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSMQVEFALQR 112
           VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR
Sbjct: 226 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQR 285

Query: 113 DRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEI 172
            + +MG RY+EV++   +D+        N                  +F  K   E   I
Sbjct: 286 HKHHMGTRYIEVYKATGEDFLKIAGGTSN---------------EVAQFLSK---ENQVI 345

Query: 173 LKLRGLPFSVTKSNITEFFGEF-DLT--EDRVHIASRPDGKATGEAYVEFASAEEAKRAM 232
           +++RGLPF+ T   +  FFG+   +T  ++ +   + PDG+ TG+A+V FA  E A+ A+
Sbjct: 346 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 405

Query: 233 SKDKMMIGSRYVELFPSTPNEARRAESR 255
            K K ++G RY+ELF ST  E ++  +R
Sbjct: 406 RKHKDLLGKRYIELFRSTAAEVQQVLNR 415

[Close]

BLAST of MC01g1236 vs. ExPASy Swiss-Prot
Match: B2RYD2 (Epithelial splicing regulatory protein 1 OS=Rattus norvegicus OX=10116 GN=Esrp1 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 74/208 (35.58%), Postives = 110/208 (52.88%), Query Frame = 0


Query: 53  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSMQVEFALQR 112
           VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR
Sbjct: 226 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQR 285

Query: 113 DRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEI 172
            + +MG RY+EV++   +D+        N                  +F  K   E   I
Sbjct: 286 HKHHMGTRYIEVYKATGEDFLKIAGGTSN---------------EVAQFLSK---ENQVI 345

Query: 173 LKLRGLPFSVTKSNITEFFGEF-DLT--EDRVHIASRPDGKATGEAYVEFASAEEAKRAM 232
           +++RGLPF+ T   +  FFG+   +T  ++ +   + PDG+ TG+A+V FA  E A+ A+
Sbjct: 346 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 405

Query: 233 SKDKMMIGSRYVELFPSTPNEARRAESR 255
            K K ++G RY+ELF ST  E ++  +R
Sbjct: 406 RKHKDLLGKRYIELFRSTAAEVQQVLNR 415

[Close]

BLAST of MC01g1236 vs. ExPASy Swiss-Prot
Match: P52597 (Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens OX=9606 GN=HNRNPF PE=1 SV=3)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 53  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSMQVEFAL 112
           VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL
Sbjct: 12  VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71

Query: 113 QRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 172
           ++DR++MG RY+EVF+  R +               D     S P      +D       
Sbjct: 72  KKDRESMGHRYIEVFKSHRTE--------------MDWVLKHSGPNSADSAND------- 131

Query: 173 EILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMS 232
             ++LRGLPF  TK  I +FF   ++  + + +   P+GK TGEA+V+FAS E A++A+ 
Sbjct: 132 GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191

Query: 233 KDKMMIGSRYVELFPSTPNEAR 250
           K K  IG RY+E+F S+  E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192

[Close]

BLAST of MC01g1236 vs. ExPASy Swiss-Prot
Match: Q60HC3 (Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis OX=9541 GN=HNRNPF PE=2 SV=3)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 53  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSMQVEFAL 112
           VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL
Sbjct: 12  VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71

Query: 113 QRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 172
           ++DR++MG RY+EVF+  R +               D     S P      +D       
Sbjct: 72  KKDRESMGHRYIEVFKSHRTE--------------MDWVLKHSGPNSADSAND------- 131

Query: 173 EILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMS 232
             ++LRGLPF  TK  I +FF   ++  + + +   P+GK TGEA+V+FAS E A++A+ 
Sbjct: 132 GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191

Query: 233 KDKMMIGSRYVELFPSTPNEAR 250
           K K  IG RY+E+F S+  E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192

[Close]

BLAST of MC01g1236 vs. NCBI nr
Match: XP_022133202.1 (heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Momordica charantia] >XP_022133203.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Momordica charantia])

HSP 1 Score: 520 bits (1338), Expect = 7.02e-186
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 60
           AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 66

Query: 61  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 120
           FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 126

Query: 121 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 180
           VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT
Sbjct: 127 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 186

Query: 181 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 240
           KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL
Sbjct: 187 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 246

Query: 241 FPSTPNEARRAESRSRQ 257
           FPSTPNEARRAESRSRQ
Sbjct: 247 FPSTPNEARRAESRSRQ 263

[Close]

BLAST of MC01g1236 vs. NCBI nr
Match: XP_004134826.1 (heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus] >XP_011658072.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus] >KGN48994.1 hypothetical protein Csa_003171 [Cucumis sativus])

HSP 1 Score: 508 bits (1307), Expect = 3.74e-181
Identity = 251/257 (97.67%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 60
           AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 66

Query: 61  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 120
           FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 126

Query: 121 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 180
           VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT
Sbjct: 127 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 186

Query: 181 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 240
           KSNI EFFGEFDL EDR+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVEL
Sbjct: 187 KSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVEL 246

Query: 241 FPSTPNEARRAESRSRQ 257
           FPSTPNEARRAESRSRQ
Sbjct: 247 FPSTPNEARRAESRSRQ 263

[Close]

BLAST of MC01g1236 vs. NCBI nr
Match: XP_008440908.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo] >XP_016899253.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo])

HSP 1 Score: 507 bits (1306), Expect = 5.31e-181
Identity = 250/257 (97.28%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 60
           AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 66

Query: 61  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 120
           FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 126

Query: 121 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 180
           VFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT
Sbjct: 127 VFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 186

Query: 181 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 240
           KSNI EFFGEFDL EDR+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVEL
Sbjct: 187 KSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVEL 246

Query: 241 FPSTPNEARRAESRSRQ 257
           FPSTPNEARRAESRSRQ
Sbjct: 247 FPSTPNEARRAESRSRQ 263

[Close]

BLAST of MC01g1236 vs. NCBI nr
Match: XP_038882740.1 (heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Benincasa hispida])

HSP 1 Score: 506 bits (1304), Expect = 1.07e-180
Identity = 250/257 (97.28%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 60
           AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 66

Query: 61  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 120
           FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 126

Query: 121 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 180
           VFRCKRQDYYNAVA+EVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT
Sbjct: 127 VFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 186

Query: 181 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 240
           KSNI EFFGEFDL EDR+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVEL
Sbjct: 187 KSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVEL 246

Query: 241 FPSTPNEARRAESRSRQ 257
           FPSTPNEARRAESRSRQ
Sbjct: 247 FPSTPNEARRAESRSRQ 263

[Close]

BLAST of MC01g1236 vs. NCBI nr
Match: XP_023544122.1 (heterogeneous nuclear ribonucleoprotein H-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023544123.1 heterogeneous nuclear ribonucleoprotein H-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496 bits (1278), Expect = 9.85e-177
Identity = 245/257 (95.33%), Postives = 250/257 (97.28%), Query Frame = 0


Query: 1   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 60
           AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 66

Query: 61  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 120
           FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVE 126

Query: 121 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 180
           VF CKRQDYYNAVAAEVNYEGIYDNDY+GSPPPRQKR SDKDQMEYTEILKLRGLPFSVT
Sbjct: 127 VFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVT 186

Query: 181 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 240
           KSNI EFFGEFDL E+R+HIASRPDGKATGEAYVEFAS E+AKRAMSKDKM IGSRYVEL
Sbjct: 187 KSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASVEDAKRAMSKDKMTIGSRYVEL 246

Query: 241 FPSTPNEARRAESRSRQ 257
           FPSTPNEARRAESRSRQ
Sbjct: 247 FPSTPNEARRAESRSRQ 263

[Close]

BLAST of MC01g1236 vs. ExPASy TrEMBL
Match: A0A6J1BYF3 (heterogeneous nuclear ribonucleoprotein H2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005858 PE=4 SV=1)

HSP 1 Score: 520 bits (1338), Expect = 3.40e-186
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 60
           AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 66

Query: 61  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 120
           FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 126

Query: 121 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 180
           VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT
Sbjct: 127 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 186

Query: 181 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 240
           KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL
Sbjct: 187 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 246

Query: 241 FPSTPNEARRAESRSRQ 257
           FPSTPNEARRAESRSRQ
Sbjct: 247 FPSTPNEARRAESRSRQ 263

[Close]

BLAST of MC01g1236 vs. ExPASy TrEMBL
Match: A0A0A0KJN7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509630 PE=4 SV=1)

HSP 1 Score: 508 bits (1307), Expect = 1.81e-181
Identity = 251/257 (97.67%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 60
           AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 66

Query: 61  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 120
           FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 126

Query: 121 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 180
           VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT
Sbjct: 127 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 186

Query: 181 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 240
           KSNI EFFGEFDL EDR+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVEL
Sbjct: 187 KSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVEL 246

Query: 241 FPSTPNEARRAESRSRQ 257
           FPSTPNEARRAESRSRQ
Sbjct: 247 FPSTPNEARRAESRSRQ 263

[Close]

BLAST of MC01g1236 vs. ExPASy TrEMBL
Match: A0A1S4DTH1 (heterogeneous nuclear ribonucleoprotein H2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485191 PE=4 SV=1)

HSP 1 Score: 507 bits (1306), Expect = 2.57e-181
Identity = 250/257 (97.28%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 60
           AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 66

Query: 61  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 120
           FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 126

Query: 121 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 180
           VFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT
Sbjct: 127 VFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 186

Query: 181 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 240
           KSNI EFFGEFDL EDR+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVEL
Sbjct: 187 KSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVEL 246

Query: 241 FPSTPNEARRAESRSRQ 257
           FPSTPNEARRAESRSRQ
Sbjct: 247 FPSTPNEARRAESRSRQ 263

[Close]

BLAST of MC01g1236 vs. ExPASy TrEMBL
Match: A0A6J1IJJ3 (heterogeneous nuclear ribonucleoprotein H-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477672 PE=4 SV=1)

HSP 1 Score: 496 bits (1276), Expect = 9.63e-177
Identity = 245/257 (95.33%), Postives = 251/257 (97.67%), Query Frame = 0


Query: 1   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 60
           AMLGSGGVSDGY+VGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYKVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 66

Query: 61  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 120
           FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVE 126

Query: 121 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 180
           VF CKRQDYYNAVAAEVNYEGIY+NDY+GSPPPRQKR SDKDQMEYTEILKLRGLPFSVT
Sbjct: 127 VFSCKRQDYYNAVAAEVNYEGIYNNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVT 186

Query: 181 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 240
           KSNI EFFGEFDL E+R+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVEL
Sbjct: 187 KSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVEL 246

Query: 241 FPSTPNEARRAESRSRQ 257
           FPSTPNEARRAESRSRQ
Sbjct: 247 FPSTPNEARRAESRSRQ 263

[Close]

BLAST of MC01g1236 vs. ExPASy TrEMBL
Match: A0A6J1EFC5 (heterogeneous nuclear ribonucleoprotein H2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433681 PE=4 SV=1)

HSP 1 Score: 495 bits (1274), Expect = 1.94e-176
Identity = 244/257 (94.94%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 60
           AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSST GFQPYGYGSFPPT AFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTVGFQPYGYGSFPPTHAFPVVRLRGLP 66

Query: 61  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 120
           FNC+DIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Sbjct: 67  FNCSDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 126

Query: 121 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 180
           VFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSV 
Sbjct: 127 VFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVK 186

Query: 181 KSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVEL 240
           KS+I EFFGEFDL EDR+HIASRPDGKATGEAYVEFAS EEAKRAMSKDKM IGSRYVEL
Sbjct: 187 KSDIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASEEEAKRAMSKDKMTIGSRYVEL 246

Query: 241 FPSTPNEARRAESRSRQ 257
           FPST NEARRAESRSRQ
Sbjct: 247 FPSTSNEARRAESRSRQ 263

[Close]

BLAST of MC01g1236 vs. TAIR 10
Match: AT5G66010.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 344.4 bits (882), Expect = 8.1e-95
Identity = 177/261 (67.82%), Postives = 204/261 (78.16%), Query Frame = 0


Query: 1   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLP 60
           AM GSG    GYEVGSKRQRMM+ NPY AV +    F P+GY        FPVVRLRGLP
Sbjct: 7   AMFGSG----GYEVGSKRQRMMQSNPYLAVGTGPTSFPPFGYAG-----GFPVVRLRGLP 66

Query: 61  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 120
           FNC DIDIF+FFAGL+IVDVLLV+KNG+F GEAFVVFAG MQVE ALQRDR NMGRRYVE
Sbjct: 67  FNCADIDIFEFFAGLNIVDVLLVSKNGKFSGEAFVVFAGPMQVEIALQRDRHNMGRRYVE 126

Query: 121 VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLP 180
           VFRC +QDYYNAVAAE   EG Y+ +   SPPP    R KRFS+K+++EYTE+LK+RGLP
Sbjct: 127 VFRCSKQDYYNAVAAE---EGAYEYEVRASPPPTGPSRAKRFSEKEKLEYTEVLKMRGLP 186

Query: 181 FSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSR 240
           +SV K  I EFF  + + + RV +  RPDGKATGEA+VEF + EEA+RAM+KDKM IGSR
Sbjct: 187 YSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFETGEEARRAMAKDKMSIGSR 246

Query: 241 YVELFPSTPNEARRAESRSRQ 258
           YVELFP+T  EARRAE+RSRQ
Sbjct: 247 YVELFPTTREEARRAEARSRQ 255

[Close]

BLAST of MC01g1236 vs. TAIR 10
Match: AT3G20890.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 235.7 bits (600), Expect = 4.1e-62
Identity = 132/288 (45.83%), Postives = 180/288 (62.50%), Query Frame = 0


Query: 4   GSGGVSDGYEVGSKRQRMME---PNPYFAV-SSSTAGFQPYGYGSFPPTPAFPVVRLRGL 63
           G G   DG E+G KRQRM++   P P++    SS   + PYG+ + PP P FP VRLRGL
Sbjct: 5   GYGDGPDGREMGPKRQRMIDQGPPGPFYGPHPSSGFMYNPYGFVAPPPPPPFPAVRLRGL 64

Query: 64  PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYV 123
           PF+C ++D+ +FF GLD+VDVL V++N +  GEAF V    +QV+FALQ++RQNMGRRYV
Sbjct: 65  PFDCAELDVVEFFHGLDVVDVLFVHRNNKVTGEAFCVLGYPLQVDFALQKNRQNMGRRYV 124

Query: 124 EVFRCKRQDYYNAVAAEVNYEGIY--------------------------DNDYHGSPPP 183
           EVFR  +Q+YY A+A EV    ++                               GS P 
Sbjct: 125 EVFRSTKQEYYKAIANEVAESRVHGMASGGGGGLGGGNGSGGGGGGGGGGGRISGGSSPR 184

Query: 184 R---QKRFSD--KDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKA 243
           R   + R SD  K+ +E+T IL+LRGLPFS  K +I +FF +F+L+ED VH+    +G+ 
Sbjct: 185 RHVQRARSSDDGKEDIEHTGILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNGEGRP 244

Query: 244 TGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSR 257
           TGEA+VEF +AE+++ AM KD+  +GSRY+ELFPS+  E   A SR R
Sbjct: 245 TGEAFVEFRNAEDSRAAMVKDRKTLGSRYIELFPSSVEELEEALSRGR 292

[Close]

BLAST of MC01g1236 vs. TAIR 10
Match: AT5G66010.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 213.0 bits (541), Expect = 2.8e-55
Identity = 108/161 (67.08%), Postives = 128/161 (79.50%), Query Frame = 0


Query: 101 MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQK 160
           MQVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ +   SPPP    R K
Sbjct: 1   MQVEIALQRDRHNMGRRYVEVFRCSKQDYYNAVAAE---EGAYEYEVRASPPPTGPSRAK 60

Query: 161 RFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEF 220
           RFS+K+++EYTE+LK+RGLP+SV K  I EFF  + + + RV +  RPDGKATGEA+VEF
Sbjct: 61  RFSEKEKLEYTEVLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEF 120

Query: 221 ASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ 258
            + EEA+RAM+KDKM IGSRYVELFP+T  EARRAE+RSRQ
Sbjct: 121 ETGEEARRAMAKDKMSIGSRYVELFPTTREEARRAEARSRQ 158

[Close]

BLAST of MC01g1236 vs. TAIR 10
Match: AT4G36960.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 52.4 bits (124), Expect = 6.4e-07
Identity = 27/85 (31.76%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 170 LKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKD 229
           L + G+P+ +    + ++  +F   ED + +  R  G++ G  YV FASAE+AK A+ K 
Sbjct: 5   LVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNAL-KG 64

Query: 230 KMMIGSRYVELFPSTPNEARRAESR 255
           +  +G+R +E+  +TP E  R  ++
Sbjct: 65  EHFLGNRILEVKVATPKEEMRQPAK 88

[Close]

BLAST of MC01g1236 vs. TAIR 10
Match: AT4G36960.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 52.4 bits (124), Expect = 6.4e-07
Identity = 27/85 (31.76%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 170 LKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKD 229
           L + G+P+ +    + ++  +F   ED + +  R  G++ G  YV FASAE+AK A+ K 
Sbjct: 5   LVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNAL-KG 64

Query: 230 KMMIGSRYVELFPSTPNEARRAESR 255
           +  +G+R +E+  +TP E  R  ++
Sbjct: 65  EHFLGNRILEVKVATPKEEMRQPAK 88

The following BLAST results are available for this feature:

BLAST of MC01g1236 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3US41	1.3e-25	35.58	Epithelial splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Esrp1 PE=1 ...	[more]
Q6NXG1	1.7e-25	35.58	Epithelial splicing regulatory protein 1 OS=Homo sapiens OX=9606 GN=ESRP1 PE=1 S...	[more]
B2RYD2	1.7e-25	35.58	Epithelial splicing regulatory protein 1 OS=Rattus norvegicus OX=10116 GN=Esrp1 ...	[more]
P52597	1.7e-25	35.64	Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens OX=9606 GN=HNRNPF PE=1...	[more]
Q60HC3	1.7e-25	35.64	Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis OX=9541 GN=HNRN...	[more]

BLAST of MC01g1236 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133202.1	7.02e-186	100.00	heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Momordica charantia] >XP_...	[more]
XP_004134826.1	3.74e-181	97.67	heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus] >XP_0116...	[more]
XP_008440908.1	5.31e-181	97.28	PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo] ...	[more]
XP_038882740.1	1.07e-180	97.28	heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Benincasa hispida]	[more]
XP_023544122.1	9.85e-177	95.33	heterogeneous nuclear ribonucleoprotein H-like isoform X1 [Cucurbita pepo subsp....	[more]

BLAST of MC01g1236 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYF3	3.40e-186	100.00	heterogeneous nuclear ribonucleoprotein H2 isoform X1 OS=Momordica charantia OX=...	[more]
A0A0A0KJN7	1.81e-181	97.67	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509630 PE=4 SV...	[more]
A0A1S4DTH1	2.57e-181	97.28	heterogeneous nuclear ribonucleoprotein H2 isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1IJJ3	9.63e-177	95.33	heterogeneous nuclear ribonucleoprotein H-like isoform X1 OS=Cucurbita maxima OX...	[more]
A0A6J1EFC5	1.94e-176	94.94	heterogeneous nuclear ribonucleoprotein H2-like isoform X1 OS=Cucurbita moschata...	[more]

BLAST of MC01g1236 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66010.1	8.1e-95	67.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G20890.1	4.1e-62	45.83	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G66010.2	2.8e-55	67.08	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G36960.1	6.4e-07	31.76	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G36960.2	6.4e-07	31.76	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 169..241 e-value: 2.9E-9 score: 46.8 coord: 53..122 e-value: 1.6E-5 score: 34.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 55..117 e-value: 2.2E-6 score: 27.4 coord: 172..238 e-value: 4.6E-9 score: 36.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 168..245 score: 10.445465
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 51..135 e-value: 1.9E-23 score: 84.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 153..257 e-value: 2.4E-29 score: 103.4
None	No IPR available	PANTHER	PTHR13976	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED	coord: 3..257
None	No IPR available	PANTHER	PTHR13976:SF71	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 3..257
None	No IPR available	CDD	cd12254	RRM_hnRNPH_ESRPs_RBM12_like	coord: 53..122 e-value: 1.33865E-24 score: 91.4647
None	No IPR available	CDD	cd12254	RRM_hnRNPH_ESRPs_RBM12_like	coord: 169..241 e-value: 5.7572E-29 score: 102.635
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 46..131
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 167..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1236.1	MC01g1236.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding