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MC01g1195 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTACAGGAAGATAATCTCCTCCTTTTATAACTTCGTTGTCCTCAAACTGTATCCAGGAATCAAGGATGCATTATTCTGTGGGGATGTTATTGAATCACATGTTAAGCAGAGGGCCAAGAAGGAAGGTTGTGAAGCTCTGGCACATCCTACCTTGTATGATGCTGTGGGCAGGGAATGGTGTTCGGTGTGTTTGTCGAAAGTAATGGAGGGAGAGGAATCACGAGTTCTTCGTCTTCCTTGCCTACATGAGTTTCATAAGATATGCATCAAGAGGTGGTTCCATGAATGCCAGAAAACCTGTCCAATCTGCCAGTTCTGGTTGAGAGATGATGATGGTCAAACAACAGAAGTGCTTACCGAGGAGATGGTAATATGGTTCACTTCCTTTCATGTTGTTGGTTAC ATGGTGTACAGGAAGATAATCTCCTCCTTTTATAACTTCGTTGTCCTCAAACTGTATCCAGGAATCAAGGATGCATTATTCTGTGGGGATGTTATTGAATCACATGTTAAGCAGAGGGCCAAGAAGGAAGGTTGTGAAGCTCTGGCACATCCTACCTTGTATGATGCTGTGGGCAGGGAATGGTGTTCGGTGTGTTTGTCGAAAGTAATGGAGGGAGAGGAATCACGAGTTCTTCGTCTTCCTTGCCTACATGAGTTTCATAAGATATGCATCAAGAGGTGGTTCCATGAATGCCAGAAAACCTGTCCAATCTGCCAGTTCTGGTTGAGAGATGATGATGGTCAAACAACAGAAGTGCTTACCGAGGAGATGGTAATATGGTTCACTTCCTTTCATGTTGTTGGTTAC ATGGTGTACAGGAAGATAATCTCCTCCTTTTATAACTTCGTTGTCCTCAAACTGTATCCAGGAATCAAGGATGCATTATTCTGTGGGGATGTTATTGAATCACATGTTAAGCAGAGGGCCAAGAAGGAAGGTTGTGAAGCTCTGGCACATCCTACCTTGTATGATGCTGTGGGCAGGGAATGGTGTTCGGTGTGTTTGTCGAAAGTAATGGAGGGAGAGGAATCACGAGTTCTTCGTCTTCCTTGCCTACATGAGTTTCATAAGATATGCATCAAGAGGTGGTTCCATGAATGCCAGAAAACCTGTCCAATCTGCCAGTTCTGGTTGAGAGATGATGATGGTCAAACAACAGAAGTGCTTACCGAGGAGATGGTAATATGGTTCACTTCCTTTCATGTTGTTGGTTAC MVYRKIISSFYNFVVLKLYPGIKDALFCGDVIESHVKQRAKKEGCEALAHPTLYDAVGREWCSVCLSKVMEGEESRVLRLPCLHEFHKICIKRWFHECQKTCPICQFWLRDDDGQTTEVLTEEMVIWFTSFHVVGY Homology
BLAST of MC01g1195 vs. ExPASy Swiss-Prot
Match: Q68DV7 (E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens OX=9606 GN=RNF43 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-08 Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of MC01g1195 vs. ExPASy Swiss-Prot
Match: Q6NRV8 (E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis OX=8355 GN=rnf111-b PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 6.6e-08 Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of MC01g1195 vs. ExPASy Swiss-Prot
Match: Q0V9R0 (E3 ubiquitin-protein ligase arkadia OS=Xenopus tropicalis OX=8364 GN=rnf111 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 6.6e-08 Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of MC01g1195 vs. ExPASy Swiss-Prot
Match: Q90ZT7 (E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis OX=8355 GN=rnf111-a PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07 Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of MC01g1195 vs. ExPASy Swiss-Prot
Match: Q66J97 (E3 ubiquitin-protein ligase arkadia-C OS=Xenopus laevis OX=8355 GN=rnf111-c PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07 Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of MC01g1195 vs. NCBI nr
Match: XP_022132660.1 (E3 ubiquitin-protein ligase RNF181 homolog [Momordica charantia]) HSP 1 Score: 292 bits (748), Expect = 5.04e-100 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of MC01g1195 vs. NCBI nr
Match: XP_038883680.1 (E3 ubiquitin-protein ligase znrf3-like [Benincasa hispida]) HSP 1 Score: 181 bits (459), Expect = 3.42e-55 Identity = 89/134 (66.42%), Postives = 105/134 (78.36%), Query Frame = 0
BLAST of MC01g1195 vs. NCBI nr
Match: KAG6603894.1 (hypothetical protein SDJN03_04503, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 168 bits (425), Expect = 4.97e-50 Identity = 81/119 (68.07%), Postives = 95/119 (79.83%), Query Frame = 0
BLAST of MC01g1195 vs. NCBI nr
Match: XP_022977421.1 (uncharacterized protein LOC111477769 isoform X1 [Cucurbita maxima]) HSP 1 Score: 163 bits (412), Expect = 2.30e-48 Identity = 78/121 (64.46%), Postives = 93/121 (76.86%), Query Frame = 0
BLAST of MC01g1195 vs. NCBI nr
Match: XP_031276738.1 (E3 ubiquitin-protein ligase At1g12760 [Pistacia vera]) HSP 1 Score: 120 bits (301), Expect = 5.96e-32 Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 0
BLAST of MC01g1195 vs. ExPASy TrEMBL
Match: A0A6J1BT35 (E3 ubiquitin-protein ligase RNF181 homolog OS=Momordica charantia OX=3673 GN=LOC111005465 PE=4 SV=1) HSP 1 Score: 292 bits (748), Expect = 2.44e-100 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of MC01g1195 vs. ExPASy TrEMBL
Match: A0A6J1IJV3 (uncharacterized protein LOC111477769 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477769 PE=4 SV=1) HSP 1 Score: 163 bits (412), Expect = 1.12e-48 Identity = 78/121 (64.46%), Postives = 93/121 (76.86%), Query Frame = 0
BLAST of MC01g1195 vs. ExPASy TrEMBL
Match: A0A5B6YSP6 (Putative E3 ubiquitin-protein ligase RHA2A (Fragment) OS=Davidia involucrata OX=16924 GN=Din_004126 PE=4 SV=1) HSP 1 Score: 118 bits (295), Expect = 2.95e-31 Identity = 63/138 (45.65%), Postives = 91/138 (65.94%), Query Frame = 0
BLAST of MC01g1195 vs. ExPASy TrEMBL
Match: W9SMW3 (E3 ubiquitin-protein ligase Arkadia OS=Morus notabilis OX=981085 GN=L484_026635 PE=4 SV=1) HSP 1 Score: 113 bits (282), Expect = 2.00e-29 Identity = 64/137 (46.72%), Postives = 89/137 (64.96%), Query Frame = 0
BLAST of MC01g1195 vs. ExPASy TrEMBL
Match: A0A061DGH2 (Nucleic acid binding protein, putative OS=Theobroma cacao OX=3641 GN=TCM_000153 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 3.00e-29 Identity = 53/137 (38.69%), Postives = 85/137 (62.04%), Query Frame = 0
BLAST of MC01g1195 vs. TAIR 10
Match: AT3G51325.1 (RING/U-box superfamily protein ) HSP 1 Score: 75.1 bits (183), Expect = 4.9e-14 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of MC01g1195 vs. TAIR 10
Match: AT1G15100.1 (RING-H2 finger A2A ) HSP 1 Score: 61.2 bits (147), Expect = 7.3e-10 Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 0
BLAST of MC01g1195 vs. TAIR 10
Match: AT3G55530.1 (RING/U-box superfamily protein ) HSP 1 Score: 55.1 bits (131), Expect = 5.2e-08 Identity = 27/57 (47.37%), Postives = 33/57 (57.89%), Query Frame = 0
BLAST of MC01g1195 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein ) HSP 1 Score: 52.0 bits (123), Expect = 4.4e-07 Identity = 19/45 (42.22%), Postives = 27/45 (60.00%), Query Frame = 0
BLAST of MC01g1195 vs. TAIR 10
Match: AT4G18110.1 (RING/U-box superfamily protein ) HSP 1 Score: 51.2 bits (121), Expect = 7.5e-07 Identity = 26/65 (40.00%), Postives = 36/65 (55.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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