MC01g1078 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g1078
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC01: 16166262 .. 16166504 (-)
RNA-Seq ExpressionMC01g1078
SyntenyMC01g1078
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGATATCGCGATTCTGGTTGCAGAGGAATACGAGAGGAGGATGAAGAATCCAGGGCTGCAGGCCAAGCAAAAGCAAGAAATTGATGGTTTTGCTTCTGGGGTTTCCATTTCTGCAACTGCGACTACTGGTAGGATGAAGCAGATGCTGCAATTGGGGAAACCAAATGCAGATTTCAAGTGGGTTTCGGAGCCCAAGTCCCAAATTGGCCGGGCCGCATCCGCCGGCTTCTTCTCTGCC

mRNA sequence

ATGGCTGATATCGCGATTCTGGTTGCAGAGGAATACGAGAGGAGGATGAAGAATCCAGGGCTGCAGGCCAAGCAAAAGCAAGAAATTGATGGTTTTGCTTCTGGGGTTTCCATTTCTGCAACTGCGACTACTGGTAGGATGAAGCAGATGCTGCAATTGGGGAAACCAAATGCAGATTTCAAGTGGGTTTCGGAGCCCAAGTCCCAAATTGGCCGGGCCGCATCCGCCGGCTTCTTCTCTGCC

Coding sequence (CDS)

ATGGCTGATATCGCGATTCTGGTTGCAGAGGAATACGAGAGGAGGATGAAGAATCCAGGGCTGCAGGCCAAGCAAAAGCAAGAAATTGATGGTTTTGCTTCTGGGGTTTCCATTTCTGCAACTGCGACTACTGGTAGGATGAAGCAGATGCTGCAATTGGGGAAACCAAATGCAGATTTCAAGTGGGTTTCGGAGCCCAAGTCCCAAATTGGCCGGGCCGCATCCGCCGGCTTCTTCTCTGCC

Protein sequence

MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPNADFKWVSEPKSQIGRAASAGFFSA
Homology
BLAST of MC01g1078 vs. NCBI nr
Match: XP_022133051.1 (uncharacterized protein LOC111005739 [Momordica charantia])

HSP 1 Score: 160 bits (405), Expect = 1.90e-49
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPNADF 60
          MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPNADF
Sbjct: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPNADF 60

Query: 61 KWVSEPKSQIGRAASAGFFSA 81
          KWVSEPKSQIGRAASAGFFSA
Sbjct: 61 KWVSEPKSQIGRAASAGFFSA 81

BLAST of MC01g1078 vs. NCBI nr
Match: XP_038882836.1 (uncharacterized protein LOC120073972 [Benincasa hispida])

HSP 1 Score: 112 bits (280), Expect = 2.36e-30
Identity = 60/84 (71.43%), Postives = 70/84 (83.33%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPNA-- 60
          MADIAILVAEEYERRMKNP  Q ++KQE+   ASGVSISATAT+ RMK+M+++ K N+  
Sbjct: 1  MADIAILVAEEYERRMKNP-TQVQEKQELQDLASGVSISATATSIRMKKMMEMAKQNSQI 60

Query: 61 -DFKWVSEPKSQIGRAASAGFFSA 81
           +FKWV EPKSQIGRAAS GFFSA
Sbjct: 61 SEFKWVFEPKSQIGRAASTGFFSA 83

BLAST of MC01g1078 vs. NCBI nr
Match: KAG6604012.1 (hypothetical protein SDJN03_04621, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034176.1 hypothetical protein SDJN02_03903, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105 bits (262), Expect = 1.31e-27
Identity = 57/84 (67.86%), Postives = 69/84 (82.14%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPNAD- 60
          MADIAILVAEEYERRMKNP  QA++ Q+++  +SGVSISATA+  RMK+M+++   NA+ 
Sbjct: 1  MADIAILVAEEYERRMKNPR-QAQETQKLEDLSSGVSISATASAIRMKKMMEIAIQNAEM 60

Query: 61 --FKWVSEPKSQIGRAASAGFFSA 81
            FKWV EPKSQIGRAAS GFFSA
Sbjct: 61 TEFKWVFEPKSQIGRAASTGFFSA 83

BLAST of MC01g1078 vs. NCBI nr
Match: XP_022962826.1 (uncharacterized protein LOC111463202 [Cucurbita moschata])

HSP 1 Score: 99.8 bits (247), Expect = 2.46e-25
Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQM----LQLGKP 60
          MADIAILVAEEYERRMKNP  + K   E+    SGVSISATA+  R+K+M    L+L +P
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATAS--RVKKMMELELELAQP 60

Query: 61 NADFKWVSEPKSQIGRAASAGFFSA 81
          N +FKWV EPKSQIGRAAS GFFSA
Sbjct: 61 N-EFKWVFEPKSQIGRAASTGFFSA 82

BLAST of MC01g1078 vs. NCBI nr
Match: KAG6594853.1 (hypothetical protein SDJN03_11406, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.4 bits (241), Expect = 2.02e-24
Identity = 56/85 (65.88%), Postives = 64/85 (75.29%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQM----LQLGKP 60
          MADIAILVAEEYERR KNP  + K   E+    SGVSISATA+  R+K+M    L+L +P
Sbjct: 1  MADIAILVAEEYERRTKNPRQEQKAAAEVQDLVSGVSISATAS--RVKKMMELELELAQP 60

Query: 61 NADFKWVSEPKSQIGRAASAGFFSA 81
          N +FKWV EPKSQIGRAAS GFFSA
Sbjct: 61 N-EFKWVFEPKSQIGRAASTGFFSA 82

BLAST of MC01g1078 vs. ExPASy TrEMBL
Match: A0A6J1BTY3 (uncharacterized protein LOC111005739 OS=Momordica charantia OX=3673 GN=LOC111005739 PE=4 SV=1)

HSP 1 Score: 160 bits (405), Expect = 9.19e-50
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPNADF 60
          MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPNADF
Sbjct: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPNADF 60

Query: 61 KWVSEPKSQIGRAASAGFFSA 81
          KWVSEPKSQIGRAASAGFFSA
Sbjct: 61 KWVSEPKSQIGRAASAGFFSA 81

BLAST of MC01g1078 vs. ExPASy TrEMBL
Match: A0A6J1HEA8 (uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC111463202 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.19e-25
Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQM----LQLGKP 60
          MADIAILVAEEYERRMKNP  + K   E+    SGVSISATA+  R+K+M    L+L +P
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATAS--RVKKMMELELELAQP 60

Query: 61 NADFKWVSEPKSQIGRAASAGFFSA 81
          N +FKWV EPKSQIGRAAS GFFSA
Sbjct: 61 N-EFKWVFEPKSQIGRAASTGFFSA 82

BLAST of MC01g1078 vs. ExPASy TrEMBL
Match: A0A6J1KS29 (uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.39e-24
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPGLQAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPNAD- 60
          MADIAILVAEEYERRMKNP  + K   E+    SGVSISATA+  R+K+M++L    A+ 
Sbjct: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATAS--RVKKMMELELELAER 60

Query: 61 --FKWVSEPKSQIGRAASAGFFSA 81
            FKWV EPKSQIGRAAS GFFSA
Sbjct: 61 NEFKWVFEPKSQIGRAASTGFFSA 82

BLAST of MC01g1078 vs. ExPASy TrEMBL
Match: A0A0A0KK75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.96e-23
Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPGL-QAKQKQEIDGF-ASGVSISATATTGRMKQMLQLGKPN- 60
          MADIAILVAEEYERR KNP   Q   +QE+    +SGVSISATAT+ RMK+M+++ K + 
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 -----ADFKWVSEPKSQIGRAASAGFFSA 81
               ++F WV EPKSQIGRAAS GFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

BLAST of MC01g1078 vs. ExPASy TrEMBL
Match: A0A5A7T3Y6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002530 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 6.36e-22
Identity = 53/88 (60.23%), Postives = 63/88 (71.59%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPGL-QAKQKQEIDGFASGVSISATATTGRMKQMLQLGKPN-- 60
          MADIAILVAEEYERR K+P   Q   +QE+    SGVSISATAT+  MK+M+++ K N  
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 ----ADFKWVSEPKSQIGRAASAGFFSA 81
              ++F  V EPKSQIGRAAS GFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

BLAST of MC01g1078 vs. TAIR 10
Match: AT5G65207.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 2.1e-04
Identity = 35/82 (42.68%), Postives = 43/82 (52.44%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPGLQAKQKQ-EIDGFASGVSISATATTGRMKQMLQLGKPNAD 60
          MADIAILVAEEYERRMK+  + ++    E D +     I A  T    K  ++  K N  
Sbjct: 1  MADIAILVAEEYERRMKHTTVGSRSSPVEFDWWK---IIPAKMTIAFDKMKIESLKKN-- 60

Query: 61 FKWVSEPKSQIGRAASAGFFSA 82
               E KS+   A S GFFSA
Sbjct: 61 ----FEAKSEFALAISHGFFSA 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022133051.11.90e-49100.00uncharacterized protein LOC111005739 [Momordica charantia][more]
XP_038882836.12.36e-3071.43uncharacterized protein LOC120073972 [Benincasa hispida][more]
KAG6604012.11.31e-2767.86hypothetical protein SDJN03_04621, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022962826.12.46e-2567.06uncharacterized protein LOC111463202 [Cucurbita moschata][more]
KAG6594853.12.02e-2465.88hypothetical protein SDJN03_11406, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1BTY39.19e-50100.00uncharacterized protein LOC111005739 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1HEA81.19e-2567.06uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC1114632... [more]
A0A6J1KS291.39e-2465.48uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122... [more]
A0A0A0KK753.96e-2361.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1[more]
A0A5A7T3Y66.36e-2260.23Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT5G65207.12.1e-0442.68unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36067EXPRESSED PROTEINcoord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g1078.1MC01g1078.1mRNA