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MC01g1034 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5CDSpolypeptideutr3 Hold the cursor over a type above to highlight its positions in the sequence below.CAAATGTACAAATTTGATCCCTAGACAAGCTTTTTATGGATCTTTGCTAAACTAAAGTATGTAATTAGCTAGGTAAAATTTTACTGGTAGTTGGTGGAGTGGGTCGAAGATTGGCTGAGCCCAGACATGAGATCTAGTGGGCCGGCCCATGTGATTAACCCGAGTACATAGGCCCAGCACAGGCCTGAACCTCGTGATCGCACCGCCTCATCCAAATTGATCACGAAAACGCAGTTGTAGGGTGAAAGCGCTGTCTCATCAGTCATCAGACTGAAATAATTCTGCTATTCGGGTCGAAGTATTTGGGCTTCAGAGAGGGAGTCCTCTGCTGGACTTCGGTTGACACGCGTTGGGATCCGAACGACTACGTGTGAAATGAGTCCTTCTCTGATTCACTGTTGTATATAAAATGGTCCACGCTTCAGATTTCCGGATTACCCTATATCGTGTTGCGACTTGCGACGCTGGTTCAGGCACAGGCTGAGGTAGGTAGCAAGTGAAGAACAGTAATGGAGGAAGAGGAGCACGAGGTTTACGGCGGAGAGATTCCGGTAGAGGAGGCGGATGTTGACATGTCTGCCGCCGATGACGACGCCATCAAGGTCCCCACATCACTCTCTCACAAGCAAATAGATCGATGATCGATGATCGATGTGGTTGTGTAATAAGTAGTTTGTTTTTGTGGTATCTCTGAATTTATGGTGGATGCTGCAGGAGCTGGACGAGATGAAGAAGCGGTTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTTGAAAAGGAAATGGGCGCTGTTCAAGGTTTAACCTCGTCTTGGAGTACCTTGGACCATACGATTTGAAATGAAATTTCATATAAAGCTACTCTAGCACCCGCCAGTGTGCCTAATGTCAATAATTTTTTACAGATCCTGCGGGTGCTGCTGTAAGCCAAGAAAACAAGGAGGAGACAGATTCACGATCCGTGTTTGTTGGCAACGTGAGATGAGAACTATGGTCTTGATATAAATTTTTTACATTATTCTTCACATGCTGCACTTTTCAATTGATCAAATTAACTAACTTGTTGATCTTGATCATATTTGTGTTGCGGCCTGATAAATACACCTATAGTACTAGCTATATTGTTTTATTGTTAATTTATGTTGGTGAGCATATCCTAGGCGAAGATTGGGTATATTTAGGTGTAAGTTAATTCTGCATAACTGCTGCTACGTTTTATTTTTACCTTTTATGCATCTCAAAAGTAAATCTGTTTAGTGATTGATAAAGTGATTTAGATTCCTCTTCCTTTCTATCGGTATTGGAAGTTCCATTCCAACTCAAGTCAAAGATATTGCAAACACATATTATTTAAGGCTTATTAGTGAAAACTTTAAGTACAGTTTTAACAAGTGTATTGTTGATGTATCCATTTTACTGGAAATCTTGTCCTGTATTTGTCTTTTTTCTTTATTCCACTGTTGTGTGTGGATGCGATGTGCATCTTCACATTGTCAGAGTAGATTTTTAACTTATCTGTCTCCCTATGATCGCAGGGTCATTCATTTTACCTGAAGTTCTCAGTATTTGCGCTCTGTTAGGCAATATTACTTATTGTGTCGTTAGGATTGTGTTCAAGCTGTAAAAGAAAAATATTCTGTATGTTTGAAACAAATTGAAGGAAAAAGTTTCAAAAAGAATGAAAAGAAGTATCCCAAATGTTTACAAAAAAGAAATATTCCAAAAAAGAACAAGATGAAAAAAAAAGAAAAGAAAAACCCTATGTATAAAAGGAAACTGAATGGCAAGAAAAAAAACAAAAAAAAAGAAGGAAAAGGAATGTGAAGATTGGGAAAATGACAAGGGTTGATGTAGTTCATTTGGTGCAAAAAAAGTATGTGAAAGTATGAACTTAGGTAGGGATGGATGGGAATGTGAATTAAAGATGCTTCAACTTCGTTTCGTGAGAGCATGATCACATCTATGGAGACAGATCATTTGCATGCAATGTTAGTTGCAGAGCATTGTTGCTGCTGGGAATGATGGTAACTTGTGCTTCAGAAATGAGGGCTATTTAACTGACCTTGATGAGGGTACATAATTTTGCTTTTCTCGTGGCTTTGATATCGATATTCTTGATTTTATTTATCTCTCTGTCAGGTATTGCTTACTGGAAAGTTTTTGCTGGCAATTAACGATCCTTAGTGGATCAGTTTCTGCCCCTCGGGTAGCTTTACCATCACTTTACTTTCTCTTCTTTGATTCTTATATTGCAAGGTTACGACTTCTGAGTGCCTTGTAATATGAGAGCGGATGCATTTCTTGCTTCTGACTTTGCTTCAAATTAAATAGCATATGTATGCAGAAGAGATATCGAGTTGCCATATATATAAGTATAAGTAGCCCTCTACAAGAATTGGGAATTTTGGCAGTTAGTGCTAATTAGATTATGACTTGAGGTGGAGAGTTTTAAGTGGAGATAGTACTAGGATTTATAGAGATGGGGAATGAGAATTGCCCATGTAGTTTGAACATTTTGGAAGGAGATATACTTGGTGGACGTGGACGAGTTGACAGTGCTTGAGGTGAGGTGCAAAGTACCACTCATGCACTAAAATTAACTCTCAGAACAGCACTATGAGTTCATAGATGAGAAACAAGTCCCAAACAGATGTTAGATTGTTGCTTGCTTAAATTGTTTTAGTTGGCTGACTTGCCTTCTCTTGACGTCATTAAATAATAGAGTTGAGCGTATATTCATTTGATAATTTACATGTCTGGAACTAAGTATACAAAATTAAAAGAGCCTTTTGTGGTTGGCACGAGCCATGATGCTTACAGAAATTAACTAAAAATATCCTTTGAAGAAATATGGTCAGTGGTTACTGATGTTGAAGGGAGTAAACATCGTATACTATTCACTAATGTTTTACTGATATTGGTTGGTTCATCTTATTTTCTAGTTTTAAGGCTAAGGATCACGTCACGTGATCCTTTGATCAATTTAAAGAAGAATCAATCTTTAGCTATTTATTACCTTTGAGTGTAATGGAATATGCATAATTTTCGGGATGGTACTCTTTGGGGTATTACACTTTATTTTATTTGTTTATTTTTCCAAAGCTTCTCTTAGGATGTACTTTCTGTTTTATGGCAAATTCCGTCTTCGATTAAAAAAATTCTTTGGGATGGAACTGGAATTGCAGGTTGATTATGCATGTACACCTGAAGAAGTGCAGCAGCACTTCCAATCATGTGGTACTGTCAACAGGGTGACTATTCTTACAGATAAATTTGGCCATCCGAAGGGCTTTGCATATGTCGAGTTCCTCGAAGCTGAAGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTTGCATGGAAGACAATTAAAGGTAGCTACTTGGAGAAGAATTTGTGCTTCTGTGAAGTTTTGGACATTGCCATACTAATTATACATTGTATAACTAGCACAGTTGTCCATAGCGTGATTCAAAGTTCTAATAATTCTAATATCATTCTATTAATCTCAGGTTCAACAAAAGCGGACTAACGTCCCTGGGATGAAGCAGTATTTTCCTCAGCGTTACAATCCTTACATGGGTTATCGGTCCCGGAGGCCTTATGTGCCGCCTTATTTTTACTCACCATATGGATATGGGTGAGTTCTCCTACAGAACATGTTTGTTCAAATTTATTGCCGGTTAGATATTCATAGATTATTTTCCTTGTCCTGCTGCAGGAAGGCACCCCGTTTCCGAAGGTCTATGCAATACATGCCATACTACTAGGAGGGTTTTGCCCATAATTTGAATATCATGTGAAACAATATATATAGATGACTTTACCCTGATTTAGAATGGATAGAACTATGGATTTGATTATCTTCAGCCTTGCCTGTTGCAATTGCATAATGATCTAATGTATGAGATATGATAGATAGTTCGTCAGGTCAGGAACCTATTTCTTTACCATGCTTCTGCTGTATGATGTTTTGGAAATGGGATTTCAAACTTTTTAGCAGTTTAAAGCCTTATGGGTAGTAGTTTTGCTGGAACTTCGATTTGCTATTTGCTGCTGTCTTCTGTAACTTTTGTACAGGTACTTCCGAGGAGAGATGCTAATGGTTTATGATGTCAAATTTAATTTTACTGACGAGAGATAAGTTAAAATTAGGAACCACAAAGCAACTACCTAGACATATAAGGGTGCAAGTAAAAAG CAAATGTACAAATTTGATCCCTAGACAAGCTTTTTATGGATCTTTGCTAAACTAAAGTATGTAATTAGCTAGGTAAAATTTTACTGGTAGTTGGTGGAGTGGGTCGAAGATTGGCTGAGCCCAGACATGAGATCTAGTGGGCCGGCCCATGTGATTAACCCGAGTACATAGGCCCAGCACAGGCCTGAACCTCGTGATCGCACCGCCTCATCCAAATTGATCACGAAAACGCAGTTGTAGGGTGAAAGCGCTGTCTCATCAGTCATCAGACTGAAATAATTCTGCTATTCGGGTCGAAGTATTTGGGCTTCAGAGAGGGAGTCCTCTGCTGGACTTCGGTTGACACGCGTTGGGATCCGAACGACTACGTGTGAAATGAGTCCTTCTCTGATTCACTGTTGTATATAAAATGGTCCACGCTTCAGATTTCCGGATTACCCTATATCGTGTTGCGACTTGCGACGCTGGTTCAGGCACAGGCTGAGGTAGGTAGCAAGTGAAGAACAGTAATGGAGGAAGAGGAGCACGAGGTTTACGGCGGAGAGATTCCGGTAGAGGAGGCGGATGTTGACATGTCTGCCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAAGAAGCGGTTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTTGAAAAGGAAATGGGCGCTGTTCAAGATCCTGCGGGTGCTGCTGTAAGCCAAGAAAACAAGGAGGAGACAGATTCACGATCCGTGTTTGTTGGCAACGTTGATTATGCATGTACACCTGAAGAAGTGCAGCAGCACTTCCAATCATGTGGTACTGTCAACAGGGTGACTATTCTTACAGATAAATTTGGCCATCCGAAGGGCTTTGCATATGTCGAGTTCCTCGAAGCTGAAGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTTGCATGGAAGACAATTAAAGGTTCAACAAAAGCGGACTAACGTCCCTGGGATGAAGCAGTATTTTCCTCAGCGTTACAATCCTTACATGGGTTATCGGTCCCGGAGGCCTTATGTGCCGCCTTATTTTTACTCACCATATGGATATGGGAAGGCACCCCGTTTCCGAAGGTCTATGCAATACATGCCATACTACTAGGAGGGTTTTGCCCATAATTTGAATATCATGTGAAACAATATATATAGATGACTTTACCCTGATTTAGAATGGATAGAACTATGGATTTGATTATCTTCAGCCTTGCCTGTTGCAATTGCATAATGATCTAATGTATGAGATATGATAGATAGTTCGTCAGGTCAGGAACCTATTTCTTTACCATGCTTCTGCTGTATGATGTTTTGGAAATGGGATTTCAAACTTTTTAGCAGTTTAAAGCCTTATGGGTAGTAGTTTTGCTGGAACTTCGATTTGCTATTTGCTGCTGTCTTCTGTAACTTTTGTACAGGTACTTCCGAGGAGAGATGCTAATGGTTTATGATGTCAAATTTAATTTTACTGACGAGAGATAAGTTAAAATTAGGAACCACAAAGCAACTACCTAGACATATAAGGGTGCAAGTAAAAAG ATGGAGGAAGAGGAGCACGAGGTTTACGGCGGAGAGATTCCGGTAGAGGAGGCGGATGTTGACATGTCTGCCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAAGAAGCGGTTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTTGAAAAGGAAATGGGCGCTGTTCAAGATCCTGCGGGTGCTGCTGTAAGCCAAGAAAACAAGGAGGAGACAGATTCACGATCCGTGTTTGTTGGCAACGTTGATTATGCATGTACACCTGAAGAAGTGCAGCAGCACTTCCAATCATGTGGTACTGTCAACAGGGTGACTATTCTTACAGATAAATTTGGCCATCCGAAGGGCTTTGCATATGTCGAGTTCCTCGAAGCTGAAGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTTGCATGGAAGACAATTAAAGGTTCAACAAAAGCGGACTAACGTCCCTGGGATGAAGCAGTATTTTCCTCAGCGTTACAATCCTTACATGGGTTATCGGTCCCGGAGGCCTTATGTGCCGCCTTATTTTTACTCACCATATGGATATGGGAAGGCACCCCGTTTCCGAAGGTCTATGCAATACATGCCATACTACTAG MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPRFRRSMQYMPYY Homology
BLAST of MC01g1034 vs. ExPASy Swiss-Prot
Match: Q9LX90 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 5.2e-92 Identity = 175/216 (81.02%), Postives = 188/216 (87.04%), Query Frame = 0
BLAST of MC01g1034 vs. ExPASy Swiss-Prot
Match: Q9FJN9 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 4.1e-89 Identity = 173/220 (78.64%), Postives = 189/220 (85.91%), Query Frame = 0
BLAST of MC01g1034 vs. ExPASy Swiss-Prot
Match: Q93VI4 (Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 8.8e-68 Identity = 146/227 (64.32%), Postives = 171/227 (75.33%), Query Frame = 0
BLAST of MC01g1034 vs. ExPASy Swiss-Prot
Match: O14327 (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pab2 PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.4e-33 Identity = 92/174 (52.87%), Postives = 112/174 (64.37%), Query Frame = 0
BLAST of MC01g1034 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.1e-32 Identity = 97/219 (44.29%), Postives = 128/219 (58.45%), Query Frame = 0
BLAST of MC01g1034 vs. NCBI nr
Match: XP_022132734.1 (polyadenylate-binding protein 3-like isoform X1 [Momordica charantia]) HSP 1 Score: 412 bits (1058), Expect = 8.00e-145 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of MC01g1034 vs. NCBI nr
Match: KAG7026854.1 (Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 395 bits (1014), Expect = 4.09e-138 Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of MC01g1034 vs. NCBI nr
Match: XP_022962974.1 (polyadenylate-binding protein 3-like [Cucurbita moschata] >XP_023518371.1 polyadenylate-binding protein 3-like [Cucurbita pepo subsp. pepo] >XP_023522686.1 polyadenylate-binding protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 395 bits (1014), Expect = 4.09e-138 Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of MC01g1034 vs. NCBI nr
Match: XP_023003098.1 (polyadenylate-binding protein 3-like [Cucurbita maxima]) HSP 1 Score: 394 bits (1013), Expect = 5.81e-138 Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of MC01g1034 vs. NCBI nr
Match: KAG6594888.1 (Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 395 bits (1014), Expect = 8.66e-138 Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of MC01g1034 vs. ExPASy TrEMBL
Match: A0A6J1BTY4 (polyadenylate-binding protein 3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005528 PE=4 SV=1) HSP 1 Score: 412 bits (1058), Expect = 3.87e-145 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of MC01g1034 vs. ExPASy TrEMBL
Match: A0A6J1HIK8 (polyadenylate-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463324 PE=4 SV=1) HSP 1 Score: 395 bits (1014), Expect = 1.98e-138 Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of MC01g1034 vs. ExPASy TrEMBL
Match: A0A6J1KVH8 (polyadenylate-binding protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111496810 PE=4 SV=1) HSP 1 Score: 394 bits (1013), Expect = 2.81e-138 Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of MC01g1034 vs. ExPASy TrEMBL
Match: A0A5A7T2C2 (Polyadenylate-binding protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002980 PE=4 SV=1) HSP 1 Score: 393 bits (1009), Expect = 1.19e-137 Identity = 201/212 (94.81%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of MC01g1034 vs. ExPASy TrEMBL
Match: A0A0A0KG83 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499790 PE=4 SV=1) HSP 1 Score: 391 bits (1004), Expect = 6.86e-137 Identity = 199/212 (93.87%), Postives = 206/212 (97.17%), Query Frame = 0
BLAST of MC01g1034 vs. TAIR 10
Match: AT5G10350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 338.6 bits (867), Expect = 3.7e-93 Identity = 175/216 (81.02%), Postives = 188/216 (87.04%), Query Frame = 0
BLAST of MC01g1034 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 328.9 bits (842), Expect = 2.9e-90 Identity = 173/220 (78.64%), Postives = 189/220 (85.91%), Query Frame = 0
BLAST of MC01g1034 vs. TAIR 10
Match: AT5G10350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 313.2 bits (801), Expect = 1.6e-85 Identity = 163/202 (80.69%), Postives = 175/202 (86.63%), Query Frame = 0
BLAST of MC01g1034 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 ) HSP 1 Score: 258.1 bits (658), Expect = 6.3e-69 Identity = 146/227 (64.32%), Postives = 171/227 (75.33%), Query Frame = 0
BLAST of MC01g1034 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 ) HSP 1 Score: 235.7 bits (600), Expect = 3.3e-62 Identity = 143/264 (54.17%), Postives = 169/264 (64.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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