MC01g1025 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g1025
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionE3 ubiquitin-protein ligase ATL6-like
LocationMC01: 15794239 .. 15794622 (-)
RNA-Seq ExpressionMC01g1025
SyntenyMC01g1025
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCATTGAGCCGCCCCGTAGCGGTGCTCATTGTGGTGCTTGTTTCTATTTTCTTCATCATGGTGTTTCTCTCCGTCTATCTCCGCCATTACCTGGAGTTACACGCCTCTACTCGGGCCACCGTCACCGCTGACGGCGTCAACCGCTTTGGAGCGTTACCAATGTGCGGTCTGGACCCGGCCGTCATTCGGACGTTTCCTGTGGTCGTCTACCACTCCGACTCCGCCGTCAAGGACCACATGGAATGCGCGGTCTGCCTCGCCGAATTCCAACACCACGAAACGCTGCGTTTGATTCCCAAATGCGGTCACGTTTTCCACCCTCATTGCATCGACGCCTGGCTGGGCTTCTGCGCCACGTGTCCTCTATGCAGAGCCGAGCTTGTC

mRNA sequence

GCATTGAGCCGCCCCGTAGCGGTGCTCATTGTGGTGCTTGTTTCTATTTTCTTCATCATGGTGTTTCTCTCCGTCTATCTCCGCCATTACCTGGAGTTACACGCCTCTACTCGGGCCACCGTCACCGCTGACGGCGTCAACCGCTTTGGAGCGTTACCAATGTGCGGTCTGGACCCGGCCGTCATTCGGACGTTTCCTGTGGTCGTCTACCACTCCGACTCCGCCGTCAAGGACCACATGGAATGCGCGGTCTGCCTCGCCGAATTCCAACACCACGAAACGCTGCGTTTGATTCCCAAATGCGGTCACGTTTTCCACCCTCATTGCATCGACGCCTGGCTGGGCTTCTGCGCCACGTGTCCTCTATGCAGAGCCGAGCTTGTC

Coding sequence (CDS)

GCATTGAGCCGCCCCGTAGCGGTGCTCATTGTGGTGCTTGTTTCTATTTTCTTCATCATGGTGTTTCTCTCCGTCTATCTCCGCCATTACCTGGAGTTACACGCCTCTACTCGGGCCACCGTCACCGCTGACGGCGTCAACCGCTTTGGAGCGTTACCAATGTGCGGTCTGGACCCGGCCGTCATTCGGACGTTTCCTGTGGTCGTCTACCACTCCGACTCCGCCGTCAAGGACCACATGGAATGCGCGGTCTGCCTCGCCGAATTCCAACACCACGAAACGCTGCGTTTGATTCCCAAATGCGGTCACGTTTTCCACCCTCATTGCATCGACGCCTGGCTGGGCTTCTGCGCCACGTGTCCTCTATGCAGAGCCGAGCTTGTC

Protein sequence

ALSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPAVIRTFPVVVYHSDSAVKDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGFCATCPLCRAELV
Homology
BLAST of MC01g1025 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-23
Identity = 62/138 (44.93%), Postives = 80/138 (57.97%), Query Frame = 0

Query: 2   LSRPVAVLIVVLVSIFFIMVFLSVYLRHYLEL---------HASTRATVTADGVNRFGAL 61
           LS  +AV++V+L++  F M F S+Y RH   +          A +RATV A         
Sbjct: 45  LSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNA--------- 104

Query: 62  PMCGLDPAVIRTFPVVVY---HSDSAVKDHMECAVCLAEFQHHETLRLIPKCGHVFHPHC 121
              GLD +V+ TFP  +Y    +    K  +ECA+CL EF+  ETLRL+PKC HVFHPHC
Sbjct: 105 AARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHC 164

Query: 122 IDAWLGFCATCPLCRAEL 128
           IDAWL    TCP+CRA L
Sbjct: 165 IDAWLEAHVTCPVCRANL 173

BLAST of MC01g1025 vs. ExPASy Swiss-Prot
Match: Q84W40 (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 9.0e-23
Identity = 61/128 (47.66%), Postives = 78/128 (60.94%), Query Frame = 0

Query: 6   VAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGA--LPMCGLDPAVIR 65
           +A+L++VLVS+FF + F SVY+R  LE           D  N          GLD ++I 
Sbjct: 63  MAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIE 122

Query: 66  TFPVVVYHSDSAV---KDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGFCATC 125
           TFP   Y +   +   K+ +EC+VCL EF+  ETLRLIPKC HVFHP CIDAWL    TC
Sbjct: 123 TFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTC 182

Query: 126 PLCRAELV 129
           PLCRA+L+
Sbjct: 183 PLCRADLI 190

BLAST of MC01g1025 vs. ExPASy Swiss-Prot
Match: Q8LGA5 (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-21
Identity = 60/132 (45.45%), Postives = 76/132 (57.58%), Query Frame = 0

Query: 1   ALSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNR--FGALPMCGLD 60
           +LS  +AV++VV+++  F M F +VY+RH     A   +   A G  R    A    GLD
Sbjct: 40  SLSPAMAVVVVVVIAALFFMGFFTVYIRHC--TGAVDGSVTPAGGARRRVTNATVARGLD 99

Query: 61  PAVIRTFPVVVY---HSDSAVKDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLG 120
              I TFP  VY    +    K  +ECA+CL EF+  ETLRL+PKC HVFHPHCI AWL 
Sbjct: 100 AETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQ 159

Query: 121 FCATCPLCRAEL 128
              TCP+CR  L
Sbjct: 160 GHVTCPVCRTNL 169

BLAST of MC01g1025 vs. ExPASy Swiss-Prot
Match: Q9SK92 (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.9e-21
Identity = 64/134 (47.76%), Postives = 83/134 (61.94%), Query Frame = 0

Query: 1   ALSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADG--VN-RFGALPMCGL 60
           + S   A++++VLVS+FF +  +SVY+R  L+ HA    +    G  +N R    P  GL
Sbjct: 34  SFSPTTAIIMIVLVSVFFALGCISVYMRRCLQ-HALGMDSGGGPGNWLNVRQTTEP--GL 93

Query: 61  DPAVIRTFPVVVYHSDSAV---KDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWL 120
           D +VI TFP   Y +   +   K+ +EC VCL EF+  ETLRLIP+C HVFHP CIDAWL
Sbjct: 94  DASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWL 153

Query: 121 GFCATCPLCRAELV 129
               TCPLCRA LV
Sbjct: 154 RSQTTCPLCRANLV 164

BLAST of MC01g1025 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.2e-20
Identity = 61/133 (45.86%), Postives = 74/133 (55.64%), Query Frame = 0

Query: 5   PVAVLIVVLVSIFFIMVFLSVYLRH------YLELHASTRATVTADGVNRFGALPMCGLD 64
           PV V+I VL  + F MVF S++ R          +  ST A   +  V R   L   GLD
Sbjct: 50  PVVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQ-VVRIRRLTARGLD 109

Query: 65  PAVIRTFPVVVYHSDSAV---KDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLG 124
              I TFP  +Y    AV   K  +ECAVCL EF+  ETLRL+P C HVFH  C+D WL 
Sbjct: 110 AEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLS 169

Query: 125 FCATCPLCRAELV 129
             +TCPLCRA+LV
Sbjct: 170 EHSTCPLCRADLV 181

BLAST of MC01g1025 vs. NCBI nr
Match: XP_022133016.1 (E3 ubiquitin-protein ligase ATL6-like [Momordica charantia])

HSP 1 Score: 263 bits (671), Expect = 3.36e-87
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0

Query: 1   ALSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPA 60
           ALSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPA
Sbjct: 45  ALSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPA 104

Query: 61  VIRTFPVVVYHSDSAVKDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGFCATC 120
           VIRTFPVVVYHSDSAVKDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGFCATC
Sbjct: 105 VIRTFPVVVYHSDSAVKDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGFCATC 164

Query: 121 PLCRAELV 128
           PLCRAELV
Sbjct: 165 PLCRAELV 172

BLAST of MC01g1025 vs. NCBI nr
Match: KGN48724.1 (hypothetical protein Csa_004396 [Cucumis sativus])

HSP 1 Score: 144 bits (364), Expect = 7.91e-41
Identity = 76/133 (57.14%), Postives = 101/133 (75.94%), Query Frame = 0

Query: 2   LSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTA-DGVNRFGALPMCGLDPA 61
           LSRP+ V +++L+ IFFI++F SVY+RH+LEL+A++ A + + + V+RFG  P  GL  A
Sbjct: 46  LSRPLTVTVLLLLFIFFIVLFFSVYIRHFLELNAASDAVLRSLERVDRFG--PSHGLKAA 105

Query: 62  VIRTFPVVVYHSDSAVKD------HMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWL 121
            I  FP+V +   SA+K+       +ECAVCLAEFQH+ETLRL+PKCGHVFHP CIDAWL
Sbjct: 106 EIGAFPLVAH---SAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWL 165

Query: 122 GFCATCPLCRAEL 127
             CATCP+CRA+L
Sbjct: 166 ASCATCPICRAQL 173

BLAST of MC01g1025 vs. NCBI nr
Match: RYR02272.1 (hypothetical protein Ahy_B06g081084 isoform A [Arachis hypogaea])

HSP 1 Score: 124 bits (311), Expect = 2.84e-31
Identity = 68/132 (51.52%), Postives = 85/132 (64.39%), Query Frame = 0

Query: 3   SRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPAVI 62
           S  +A+++V+LV+  F+M F S+Y+RH  +  + T    T  G +R GA    GLDPAVI
Sbjct: 45  SPSLAIIVVILVAALFLMGFFSIYIRHCADSPSGTVLPTTGGGRSRRGAR---GLDPAVI 104

Query: 63  RTFPVVVYHSDSAVKDH------MECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGF 122
            TFP++ Y   S VK H      +ECAVCL EF+  ETLRLIPKC HVFHP CID WL  
Sbjct: 105 ETFPILEY---SEVKIHKIGKEVLECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWLAS 164

Query: 123 CATCPLCRAELV 128
             TCP+CRA LV
Sbjct: 165 HTTCPVCRANLV 170

BLAST of MC01g1025 vs. NCBI nr
Match: XP_022999119.1 (E3 ubiquitin-protein ligase ATL6-like [Cucurbita maxima])

HSP 1 Score: 124 bits (312), Expect = 2.86e-31
Identity = 70/132 (53.03%), Postives = 87/132 (65.91%), Query Frame = 0

Query: 2   LSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPAV 61
           LS  +AV+IV+L++  F + F SVYLRH  +  +++   VTA   +R  A    GLDPAV
Sbjct: 38  LSGSMAVIIVILIAALFFVAFFSVYLRHCNDSQSNSVRPVTAAARSRRAAR---GLDPAV 97

Query: 62  IRTFPVVVYHSDSAVKDH------MECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLG 121
           I TFP ++Y   S VK+H      +ECAVCL EF+  ETLRLIPKC HVFHP CIDAWL 
Sbjct: 98  IETFPTLIY---SDVKEHKIGKSTLECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLA 157

Query: 122 FCATCPLCRAEL 127
              TCP+CRA L
Sbjct: 158 SHTTCPVCRANL 163

BLAST of MC01g1025 vs. NCBI nr
Match: RYR02271.1 (hypothetical protein Ahy_B06g081084 isoform D [Arachis hypogaea])

HSP 1 Score: 124 bits (311), Expect = 3.56e-31
Identity = 68/132 (51.52%), Postives = 85/132 (64.39%), Query Frame = 0

Query: 3   SRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPAVI 62
           S  +A+++V+LV+  F+M F S+Y+RH  +  + T    T  G +R GA    GLDPAVI
Sbjct: 45  SPSLAIIVVILVAALFLMGFFSIYIRHCADSPSGTVLPTTGGGRSRRGAR---GLDPAVI 104

Query: 63  RTFPVVVYHSDSAVKDH------MECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGF 122
            TFP++ Y   S VK H      +ECAVCL EF+  ETLRLIPKC HVFHP CID WL  
Sbjct: 105 ETFPILEY---SEVKIHKIGKEVLECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWLAS 164

Query: 123 CATCPLCRAELV 128
             TCP+CRA LV
Sbjct: 165 HTTCPVCRANLV 170

BLAST of MC01g1025 vs. ExPASy TrEMBL
Match: A0A6J1BTV2 (E3 ubiquitin-protein ligase ATL6-like OS=Momordica charantia OX=3673 GN=LOC111005711 PE=4 SV=1)

HSP 1 Score: 263 bits (671), Expect = 1.63e-87
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0

Query: 1   ALSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPA 60
           ALSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPA
Sbjct: 45  ALSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPA 104

Query: 61  VIRTFPVVVYHSDSAVKDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGFCATC 120
           VIRTFPVVVYHSDSAVKDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGFCATC
Sbjct: 105 VIRTFPVVVYHSDSAVKDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGFCATC 164

Query: 121 PLCRAELV 128
           PLCRAELV
Sbjct: 165 PLCRAELV 172

BLAST of MC01g1025 vs. ExPASy TrEMBL
Match: A0A0A0KIT7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499190 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 3.83e-41
Identity = 76/133 (57.14%), Postives = 101/133 (75.94%), Query Frame = 0

Query: 2   LSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTA-DGVNRFGALPMCGLDPA 61
           LSRP+ V +++L+ IFFI++F SVY+RH+LEL+A++ A + + + V+RFG  P  GL  A
Sbjct: 46  LSRPLTVTVLLLLFIFFIVLFFSVYIRHFLELNAASDAVLRSLERVDRFG--PSHGLKAA 105

Query: 62  VIRTFPVVVYHSDSAVKD------HMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWL 121
            I  FP+V +   SA+K+       +ECAVCLAEFQH+ETLRL+PKCGHVFHP CIDAWL
Sbjct: 106 EIGAFPLVAH---SAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWL 165

Query: 122 GFCATCPLCRAEL 127
             CATCP+CRA+L
Sbjct: 166 ASCATCPICRAQL 173

BLAST of MC01g1025 vs. ExPASy TrEMBL
Match: A0A444YK34 (RING-type domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B06g081084 PE=4 SV=1)

HSP 1 Score: 124 bits (311), Expect = 1.38e-31
Identity = 68/132 (51.52%), Postives = 85/132 (64.39%), Query Frame = 0

Query: 3   SRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPAVI 62
           S  +A+++V+LV+  F+M F S+Y+RH  +  + T    T  G +R GA    GLDPAVI
Sbjct: 45  SPSLAIIVVILVAALFLMGFFSIYIRHCADSPSGTVLPTTGGGRSRRGAR---GLDPAVI 104

Query: 63  RTFPVVVYHSDSAVKDH------MECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGF 122
            TFP++ Y   S VK H      +ECAVCL EF+  ETLRLIPKC HVFHP CID WL  
Sbjct: 105 ETFPILEY---SEVKIHKIGKEVLECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWLAS 164

Query: 123 CATCPLCRAELV 128
             TCP+CRA LV
Sbjct: 165 HTTCPVCRANLV 170

BLAST of MC01g1025 vs. ExPASy TrEMBL
Match: A0A6J1KG60 (E3 ubiquitin-protein ligase ATL6-like OS=Cucurbita maxima OX=3661 GN=LOC111493598 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 1.38e-31
Identity = 70/132 (53.03%), Postives = 87/132 (65.91%), Query Frame = 0

Query: 2   LSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPAV 61
           LS  +AV+IV+L++  F + F SVYLRH  +  +++   VTA   +R  A    GLDPAV
Sbjct: 38  LSGSMAVIIVILIAALFFVAFFSVYLRHCNDSQSNSVRPVTAAARSRRAAR---GLDPAV 97

Query: 62  IRTFPVVVYHSDSAVKDH------MECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLG 121
           I TFP ++Y   S VK+H      +ECAVCL EF+  ETLRLIPKC HVFHP CIDAWL 
Sbjct: 98  IETFPTLIY---SDVKEHKIGKSTLECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLA 157

Query: 122 FCATCPLCRAEL 127
              TCP+CRA L
Sbjct: 158 SHTTCPVCRANL 163

BLAST of MC01g1025 vs. ExPASy TrEMBL
Match: A0A444YK30 (RING-type domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B06g081084 PE=4 SV=1)

HSP 1 Score: 124 bits (311), Expect = 1.72e-31
Identity = 68/132 (51.52%), Postives = 85/132 (64.39%), Query Frame = 0

Query: 3   SRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGALPMCGLDPAVI 62
           S  +A+++V+LV+  F+M F S+Y+RH  +  + T    T  G +R GA    GLDPAVI
Sbjct: 45  SPSLAIIVVILVAALFLMGFFSIYIRHCADSPSGTVLPTTGGGRSRRGAR---GLDPAVI 104

Query: 63  RTFPVVVYHSDSAVKDH------MECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGF 122
            TFP++ Y   S VK H      +ECAVCL EF+  ETLRLIPKC HVFHP CID WL  
Sbjct: 105 ETFPILEY---SEVKIHKIGKEVLECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWLAS 164

Query: 123 CATCPLCRAELV 128
             TCP+CRA LV
Sbjct: 165 HTTCPVCRANLV 170

BLAST of MC01g1025 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 2.9e-24
Identity = 62/138 (44.93%), Postives = 80/138 (57.97%), Query Frame = 0

Query: 2   LSRPVAVLIVVLVSIFFIMVFLSVYLRHYLEL---------HASTRATVTADGVNRFGAL 61
           LS  +AV++V+L++  F M F S+Y RH   +          A +RATV A         
Sbjct: 45  LSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNA--------- 104

Query: 62  PMCGLDPAVIRTFPVVVY---HSDSAVKDHMECAVCLAEFQHHETLRLIPKCGHVFHPHC 121
              GLD +V+ TFP  +Y    +    K  +ECA+CL EF+  ETLRL+PKC HVFHPHC
Sbjct: 105 AARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHC 164

Query: 122 IDAWLGFCATCPLCRAEL 128
           IDAWL    TCP+CRA L
Sbjct: 165 IDAWLEAHVTCPVCRANL 173

BLAST of MC01g1025 vs. TAIR 10
Match: AT1G72200.1 (RING/U-box superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 6.4e-24
Identity = 61/128 (47.66%), Postives = 78/128 (60.94%), Query Frame = 0

Query: 6   VAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNRFGA--LPMCGLDPAVIR 65
           +A+L++VLVS+FF + F SVY+R  LE           D  N          GLD ++I 
Sbjct: 63  MAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIE 122

Query: 66  TFPVVVYHSDSAV---KDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLGFCATC 125
           TFP   Y +   +   K+ +EC+VCL EF+  ETLRLIPKC HVFHP CIDAWL    TC
Sbjct: 123 TFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTC 182

Query: 126 PLCRAELV 129
           PLCRA+L+
Sbjct: 183 PLCRADLI 190

BLAST of MC01g1025 vs. TAIR 10
Match: AT5G27420.1 (carbon/nitrogen insensitive 1 )

HSP 1 Score: 104.0 bits (258), Expect = 9.2e-23
Identity = 60/132 (45.45%), Postives = 76/132 (57.58%), Query Frame = 0

Query: 1   ALSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADGVNR--FGALPMCGLD 60
           +LS  +AV++VV+++  F M F +VY+RH     A   +   A G  R    A    GLD
Sbjct: 40  SLSPAMAVVVVVVIAALFFMGFFTVYIRHC--TGAVDGSVTPAGGARRRVTNATVARGLD 99

Query: 61  PAVIRTFPVVVY---HSDSAVKDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLG 120
              I TFP  VY    +    K  +ECA+CL EF+  ETLRL+PKC HVFHPHCI AWL 
Sbjct: 100 AETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQ 159

Query: 121 FCATCPLCRAEL 128
              TCP+CR  L
Sbjct: 160 GHVTCPVCRTNL 169

BLAST of MC01g1025 vs. TAIR 10
Match: AT1G22500.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 3.5e-22
Identity = 64/134 (47.76%), Postives = 83/134 (61.94%), Query Frame = 0

Query: 1   ALSRPVAVLIVVLVSIFFIMVFLSVYLRHYLELHASTRATVTADG--VN-RFGALPMCGL 60
           + S   A++++VLVS+FF +  +SVY+R  L+ HA    +    G  +N R    P  GL
Sbjct: 34  SFSPTTAIIMIVLVSVFFALGCISVYMRRCLQ-HALGMDSGGGPGNWLNVRQTTEP--GL 93

Query: 61  DPAVIRTFPVVVYHSDSAV---KDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWL 120
           D +VI TFP   Y +   +   K+ +EC VCL EF+  ETLRLIP+C HVFHP CIDAWL
Sbjct: 94  DASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWL 153

Query: 121 GFCATCPLCRAELV 129
               TCPLCRA LV
Sbjct: 154 RSQTTCPLCRANLV 164

BLAST of MC01g1025 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.3e-21
Identity = 61/133 (45.86%), Postives = 74/133 (55.64%), Query Frame = 0

Query: 5   PVAVLIVVLVSIFFIMVFLSVYLRH------YLELHASTRATVTADGVNRFGALPMCGLD 64
           PV V+I VL  + F MVF S++ R          +  ST A   +  V R   L   GLD
Sbjct: 50  PVVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQ-VVRIRRLTARGLD 109

Query: 65  PAVIRTFPVVVYHSDSAV---KDHMECAVCLAEFQHHETLRLIPKCGHVFHPHCIDAWLG 124
              I TFP  +Y    AV   K  +ECAVCL EF+  ETLRL+P C HVFH  C+D WL 
Sbjct: 110 AEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLS 169

Query: 125 FCATCPLCRAELV 129
             +TCPLCRA+LV
Sbjct: 170 EHSTCPLCRADLV 181

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8RXX94.0e-2344.93E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV... [more]
Q84W409.0e-2347.66RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2[more]
Q8LGA51.3e-2145.45E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 ... [more]
Q9SK924.9e-2147.76E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 ... [more]
O647633.2e-2045.86E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV... [more]
Match NameE-valueIdentityDescription
XP_022133016.13.36e-87100.00E3 ubiquitin-protein ligase ATL6-like [Momordica charantia][more]
KGN48724.17.91e-4157.14hypothetical protein Csa_004396 [Cucumis sativus][more]
RYR02272.12.84e-3151.52hypothetical protein Ahy_B06g081084 isoform A [Arachis hypogaea][more]
XP_022999119.12.86e-3153.03E3 ubiquitin-protein ligase ATL6-like [Cucurbita maxima][more]
RYR02271.13.56e-3151.52hypothetical protein Ahy_B06g081084 isoform D [Arachis hypogaea][more]
Match NameE-valueIdentityDescription
A0A6J1BTV21.63e-87100.00E3 ubiquitin-protein ligase ATL6-like OS=Momordica charantia OX=3673 GN=LOC11100... [more]
A0A0A0KIT73.83e-4157.14RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499190 P... [more]
A0A444YK341.38e-3151.52RING-type domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B06g08108... [more]
A0A6J1KG601.38e-3153.03E3 ubiquitin-protein ligase ATL6-like OS=Cucurbita maxima OX=3661 GN=LOC11149359... [more]
A0A444YK301.72e-3151.52RING-type domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B06g08108... [more]
Match NameE-valueIdentityDescription
AT3G05200.12.9e-2444.93RING/U-box superfamily protein [more]
AT1G72200.16.4e-2447.66RING/U-box superfamily protein [more]
AT5G27420.19.2e-2345.45carbon/nitrogen insensitive 1 [more]
AT1G22500.13.5e-2247.76RING/U-box superfamily protein [more]
AT2G35000.12.3e-2145.86RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 82..123
e-value: 3.4E-4
score: 29.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 81..124
e-value: 5.0E-12
score: 46.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 82..124
score: 12.149959
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 57..128
e-value: 1.6E-20
score: 74.1
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 4..127
NoneNo IPR availablePANTHERPTHR14155:SF263E3 UBIQUITIN-PROTEIN LIGASE ATL6coord: 4..127
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 61..127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g1025.1MC01g1025.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane