MC01g0900 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0900
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	lysine-rich arabinogalactan protein 18-like
Location	MC01: 14811558 .. 14812208 (-)
RNA-Seq Expression	MC01g0900
Synteny	MC01g0900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACGGTAGAAATGGGACGACAGTCTTTGATCGCACTCGTTCTAATCTGCGCCGTCGTCGCCGGCGTCGGTGGCCAGTCCCCAGCTGCAGCTCCGACTACTACCCCGGCGGCTGCCGCACCAGCGGCAGCTAAATTCCCCCCTCCAGCCGCAGCACCTGTATCGCCACCGACTAATTCATCTCCCGCTGCAGCTCCCCTGAAGCCGGTTACTACAGCACCAGTCGCGACGCCGCCTGCATCGTCCTCACCATCGGTCGCTCCAGTGACGTCCCCGGCGGCCAGCTCACCACCGGCTGCTTCCGTTCCGGCTAGCTCTCCACCGGCTGCTTCCGTTCCAGCGAGCTCTCCTCCCGTTCCAGTTCCGGCGAGCTCTCCGCCGGTTCCAGCTCCAGTAAGCTCTCCACCATTGCCTACTCCAACGCAATCTCCTCCCGCTCCCACGCCTACAAGCACTCCCGAAAGTGCTCCTCTTGCTCCGGTCGCATCACCTCCGGCCGAGGTTCCATCGCCGGCGCCTAGCAAGAAGAAATCAAAGAAGCACAAAGCACCAGCTCCTTCTCCGGCGTTGCTTGGTCCACCTGCTCCTCCATCTGAAGCCCCTGGAGCAAGCGAGGAAGGTCCTTCGCCCAGTCCTTCACTCGATGACAAG

mRNA sequence

CACACGGTAGAAATGGGACGACAGTCTTTGATCGCACTCGTTCTAATCTGCGCCGTCGTCGCCGGCGTCGGTGGCCAGTCCCCAGCTGCAGCTCCGACTACTACCCCGGCGGCTGCCGCACCAGCGGCAGCTAAATTCCCCCCTCCAGCCGCAGCACCTGTATCGCCACCGACTAATTCATCTCCCGCTGCAGCTCCCCTGAAGCCGGTTACTACAGCACCAGTCGCGACGCCGCCTGCATCGTCCTCACCATCGGTCGCTCCAGTGACGTCCCCGGCGGCCAGCTCACCACCGGCTGCTTCCGTTCCGGCTAGCTCTCCACCGGCTGCTTCCGTTCCAGCGAGCTCTCCTCCCGTTCCAGTTCCGGCGAGCTCTCCGCCGGTTCCAGCTCCAGTAAGCTCTCCACCATTGCCTACTCCAACGCAATCTCCTCCCGCTCCCACGCCTACAAGCACTCCCGAAAGTGCTCCTCTTGCTCCGGTCGCATCACCTCCGGCCGAGGTTCCATCGCCGGCGCCTAGCAAGAAGAAATCAAAGAAGCACAAAGCACCAGCTCCTTCTCCGGCGTTGCTTGGTCCACCTGCTCCTCCATCTGAAGCCCCTGGAGCAAGCGAGGAAGGTCCTTCGCCCAGTCCTTCACTCGATGACAAG

Coding sequence (CDS)

CACACGGTAGAAATGGGACGACAGTCTTTGATCGCACTCGTTCTAATCTGCGCCGTCGTCGCCGGCGTCGGTGGCCAGTCCCCAGCTGCAGCTCCGACTACTACCCCGGCGGCTGCCGCACCAGCGGCAGCTAAATTCCCCCCTCCAGCCGCAGCACCTGTATCGCCACCGACTAATTCATCTCCCGCTGCAGCTCCCCTGAAGCCGGTTACTACAGCACCAGTCGCGACGCCGCCTGCATCGTCCTCACCATCGGTCGCTCCAGTGACGTCCCCGGCGGCCAGCTCACCACCGGCTGCTTCCGTTCCGGCTAGCTCTCCACCGGCTGCTTCCGTTCCAGCGAGCTCTCCTCCCGTTCCAGTTCCGGCGAGCTCTCCGCCGGTTCCAGCTCCAGTAAGCTCTCCACCATTGCCTACTCCAACGCAATCTCCTCCCGCTCCCACGCCTACAAGCACTCCCGAAAGTGCTCCTCTTGCTCCGGTCGCATCACCTCCGGCCGAGGTTCCATCGCCGGCGCCTAGCAAGAAGAAATCAAAGAAGCACAAAGCACCAGCTCCTTCTCCGGCGTTGCTTGGTCCACCTGCTCCTCCATCTGAAGCCCCTGGAGCAAGCGAGGAAGGTCCTTCGCCCAGTCCTTCACTCGATGACAAG

Protein sequence

HTVEMGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAAAPLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPASSPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPSKKKSKKHKAPAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK

Homology

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BLAST of MC01g0900 vs. ExPASy Swiss-Prot
Match: Q9FPR2 (Lysine-rich arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=AGP18 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-20
Identity = 104/219 (47.49%), Postives = 130/219 (59.36%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           M R  L+ + LIC VVAGVGGQSP ++PT           K P   +AP + PT S    
Sbjct: 1   MDRNFLLTVTLICIVVAGVGGQSPISSPT-----------KSPTTPSAPTTSPTKSPAVT 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPAS 124
           +P    TTAP  TP AS+S   +PV SP + +P + S P             PP PVP S
Sbjct: 61  SP----TTAPAKTPTASAS---SPVESPKSPAPVSESSP-------------PPTPVPES 120

Query: 125 SPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPSK-----KKSK 184
           SPPVPAP+ S    +P  SPP P P +    +P APVA+P A+VP+PAPSK     KKSK
Sbjct: 121 SPPVPAPMVS----SPVSSPPVPAPVA---DSPPAPVAAPVADVPAPAPSKHKKTTKKSK 180

Query: 185 KHK-APAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 218
           KH+ APAP+P LLGPPAPP+E+PG + +  SP PS DD+
Sbjct: 181 KHQAAPAPAPELLGPPAPPTESPGPNSDAFSPGPSADDQ 181

[Close]

BLAST of MC01g0900 vs. ExPASy Swiss-Prot
Match: Q9C5S0 (Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 94/212 (44.34%), Postives = 121/212 (57.08%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           M R   IA++ I  ++AGV GQ+P + PT TPA   P     PPPAA P  PP ++ P  
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATPAPPTPTT---PPPAATP--PPVSAPP-- 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPAS 124
               PVTT+P   PP +++P       P A+ PP    P SSPP AS P ++PP   P +
Sbjct: 61  ----PVTTSP---PPVTTAP-------PPANPPP----PVSSPPPASPPPATPP---PVA 120

Query: 125 SPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPSKKKSKKHKAP 184
           SP  P PV+SPP  TP   PP  TP       P AP+ASPPA+VP+PAP+ K      +P
Sbjct: 121 SP--PPPVASPPPATP---PPVATP-------PPAPLASPPAQVPAPAPTTKPD----SP 166

Query: 185 APSPALLGPPAPPSEAPGASEEGPSPSPSLDD 217
           +PSP+   PP P S+APG S +  SP+PS  D
Sbjct: 181 SPSPS-SSPPLPSSDAPGPSTDSISPAPSPTD 166

[Close]

BLAST of MC01g0900 vs. ExPASy Swiss-Prot
Match: Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06
Identity = 85/212 (40.09%), Postives = 109/212 (51.42%), Query Frame = 0


Query: 12  ALVLICAVVA--GVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSP----AAA 71
           +L+L  A+++   V  Q PAA+P T+   A P     PP  AAP  PPT ++P    A  
Sbjct: 9   SLLLASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAP--PPTTTTPPVSAAQP 68

Query: 72  PLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPASS 131
           P  PVT  P  TP +  +P VAPV SPA   P     P +S P  S P  SPP P P S 
Sbjct: 69  PASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPP-PAPTSP 128

Query: 132 PPVPA-PVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPSKKKSK---KH 191
           PP PA P  +P  P P  + P P P S P     +P++ PPA  P+P   K+K K    H
Sbjct: 129 PPTPASPPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHH 188

Query: 192 KAPAPSPALLGPPAPPSEAPGASEEGPSPSPS 214
            APAP+P    PP+PP       +  P+PSP+
Sbjct: 189 HAPAPAPIPPSPPSPP-VLTDPQDTAPAPSPN 216

[Close]

BLAST of MC01g0900 vs. ExPASy Swiss-Prot
Match: O22194 (Lysine-rich arabinogalactan protein 17 OS=Arabidopsis thaliana OX=3702 GN=AGP17 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-06
Identity = 86/220 (39.09%), Postives = 105/220 (47.73%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           M R  L+ + LIC V   VGGQSPA AP                            SP+ 
Sbjct: 1   MTRNILLTVTLICIVFITVGGQSPATAPI--------------------------HSPST 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPAS 124
           +P KP  T              +P  SPAA +P +   PA +P  A  P  +PP P PAS
Sbjct: 61  SPHKPKPT--------------SPAISPAAPTPESTEAPAKTPVEA--PVEAPPSPTPAS 120

Query: 125 SPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPA--PSKKKSKKHK 184
           +P +              SPPAP+P +     P AP  +P A+VP+PA    KKK+KKHK
Sbjct: 121 TPQI--------------SPPAPSPEA---DTPSAPEIAPSADVPAPALTKHKKKTKKHK 158

Query: 185 -APAPSPA--LLGPPAPPSEAPGASEEGPSP--SPSLDDK 218
            APAP PA  LL PPAPP EAPG    GPS   SP+ DD+
Sbjct: 181 TAPAPGPASELLSPPAPPGEAPG---PGPSDAFSPAADDQ 158

[Close]

BLAST of MC01g0900 vs. NCBI nr
Match: XP_023517454.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267 bits (683), Expect = 3.63e-87
Identity = 177/216 (81.94%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           MGRQS+IALVLICAVVAGVGGQSPAAAPTTTPA  AP AAK+PPPAA+PV PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKYPPPAASPVVPPTNSSPAA 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPAS 124
           AP KPVT APV+TPP      VAPV SP AS+PP ASVPASSPPAASVPASSPP  VPAS
Sbjct: 61  APQKPVTPAPVSTPPV-----VAPVASPPASTPPTASVPASSPPAASVPASSPPATVPAS 120

Query: 125 SPPVPAPVSSPPLPTPTQSPPAPTPTSTP---ESAPLAPVASPPAEVPSPAPSKKKSKKH 184
           SPPVP P SSPP+P P  SPP PTP  +P   E+AP APVASPPAEVPSPAPSKKKSKKH
Sbjct: 121 SPPVPVPASSPPVPVPESSPPVPTPIESPPAPETAPPAPVASPPAEVPSPAPSKKKSKKH 180

Query: 185 KAPAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 217
           KAPAPSPALLGPPAPPSEAPG SEEGPSP+PSLDDK
Sbjct: 181 KAPAPSPALLGPPAPPSEAPGGSEEGPSPAPSLDDK 211

[Close]

BLAST of MC01g0900 vs. NCBI nr
Match: XP_022963306.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita moschata])

HSP 1 Score: 265 bits (678), Expect = 2.08e-86
Identity = 177/216 (81.94%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           MGRQS+IALVLICAVVAGVGGQSPAAAPTTTPA  AP AAK PPPAA+PV PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKNPPPAASPVVPPTNSSPAA 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPAS 124
           AP KPVT APV+TPPA     VAPV SP AS+PP ASVPASSPPAASVPASSPP  VPAS
Sbjct: 61  APQKPVTPAPVSTPPA-----VAPVASPPASTPPTASVPASSPPAASVPASSPPATVPAS 120

Query: 125 SPPVPAPVSSPPLPTPTQSPPAPTPTSTP---ESAPLAPVASPPAEVPSPAPSKKKSKKH 184
           SPPVP P SSPP+P P  SPP PTP  +P   E+AP APVASPPAEVPSPAPSKKKSKKH
Sbjct: 121 SPPVPVPASSPPVPVPESSPPVPTPIESPPAPETAPPAPVASPPAEVPSPAPSKKKSKKH 180

Query: 185 KAPAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 217
           KAPAPSPALLGPPAPPSEAPG SEEGP+P+PSLDDK
Sbjct: 181 KAPAPSPALLGPPAPPSEAPGGSEEGPTPAPSLDDK 211

[Close]

BLAST of MC01g0900 vs. NCBI nr
Match: KAG6595001.1 (hypothetical protein SDJN03_11554, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265 bits (677), Expect = 2.96e-86
Identity = 176/216 (81.48%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           MGRQS+IALV+ICAVVAGVGGQSPAAAPTTTPA  AP AAK+P PAA+PV PPTNSSPAA
Sbjct: 1   MGRQSVIALVMICAVVAGVGGQSPAAAPTTTPATPAPVAAKYPSPAASPVVPPTNSSPAA 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPAS 124
           AP KPVT APV+TPPA     VAPV SP AS+PP ASVPASSPPAASVPASSPP  VPAS
Sbjct: 61  APQKPVTPAPVSTPPA-----VAPVASPPASTPPTASVPASSPPAASVPASSPPATVPAS 120

Query: 125 SPPVPAPVSSPPLPTPTQSPPAPTPTSTP---ESAPLAPVASPPAEVPSPAPSKKKSKKH 184
           SPPVP P SSPP+P P  SPP PTP  +P   E+AP APVASPPAEVPSPAPSKKKSKKH
Sbjct: 121 SPPVPVPASSPPVPVPESSPPVPTPIESPPAPETAPPAPVASPPAEVPSPAPSKKKSKKH 180

Query: 185 KAPAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 217
           KAPAPSPALLGPPAPPSEAPG SEEGPSP+PSLDDK
Sbjct: 181 KAPAPSPALLGPPAPPSEAPGGSEEGPSPAPSLDDK 211

[Close]

BLAST of MC01g0900 vs. NCBI nr
Match: XP_023003133.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita maxima])

HSP 1 Score: 265 bits (676), Expect = 5.85e-86
Identity = 181/226 (80.09%), Postives = 188/226 (83.19%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           MGRQS+IALVLICAVVAGVGGQSPAAAPTTTPA  AP AAK+PPPAA+PV PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKYPPPAASPVVPPTNSSPAA 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAAS----------SPPAASVPASSPPAASVPA 124
           AP KPVT APV+TPPA     VAPV SP AS          SPPAASVPASSPPAASVPA
Sbjct: 61  APQKPVTPAPVSTPPA-----VAPVASPPASTPPTASVPASSPPAASVPASSPPAASVPA 120

Query: 125 SSPPVPVPASSPPVPAPVSSPPLPTPTQSPPAPTPTSTP---ESAPLAPVASPPAEVPSP 184
           SSPP  VPASSPPVP P SSPP+P P  SPP PTP  +P   ESAP APVASPPAEVPSP
Sbjct: 121 SSPPATVPASSPPVPVPASSPPVPVPESSPPVPTPIESPPAPESAPPAPVASPPAEVPSP 180

Query: 185 APSKKKSKKHKAPAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 217
           APSKKKSKKHKAPAPSPALLGPPAPPSEAPG SEEGPSP+PSLDDK
Sbjct: 181 APSKKKSKKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPAPSLDDK 221

[Close]

BLAST of MC01g0900 vs. NCBI nr
Match: XP_008440341.2 (PREDICTED: lysine-rich arabinogalactan protein 18-like [Cucumis melo])

HSP 1 Score: 261 bits (667), Expect = 1.01e-84
Identity = 177/223 (79.37%), Postives = 190/223 (85.20%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           MGRQS+IALVLICAVVA VGGQSPAAAPTTTPAA  P AAK+PPPAA+PVSPPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAVVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVP----------A 124
           AP KP T APV+TPPAS+ P+VAPV SP AS+PP ASVPASSPPAASVP          A
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 125 SSPPVPVPASSPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPS 184
           SSPPVPVP SSPPVP PVSSPP+PTPT+SPPAP      ES+P APVASPPAEVP+PAPS
Sbjct: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAP------ESSPPAPVASPPAEVPAPAPS 180

Query: 185 KKKSKKHKAPAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 217
           KK SKKH+APAPSPALLGPPAPPSEAP  SEEGPSPSPSL+DK
Sbjct: 181 KK-SKKHRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDK 216

[Close]

BLAST of MC01g0900 vs. ExPASy TrEMBL
Match: A0A6J1HFT1 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111463555 PE=4 SV=1)

HSP 1 Score: 265 bits (678), Expect = 1.01e-86
Identity = 177/216 (81.94%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           MGRQS+IALVLICAVVAGVGGQSPAAAPTTTPA  AP AAK PPPAA+PV PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKNPPPAASPVVPPTNSSPAA 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPAS 124
           AP KPVT APV+TPPA     VAPV SP AS+PP ASVPASSPPAASVPASSPP  VPAS
Sbjct: 61  APQKPVTPAPVSTPPA-----VAPVASPPASTPPTASVPASSPPAASVPASSPPATVPAS 120

Query: 125 SPPVPAPVSSPPLPTPTQSPPAPTPTSTP---ESAPLAPVASPPAEVPSPAPSKKKSKKH 184
           SPPVP P SSPP+P P  SPP PTP  +P   E+AP APVASPPAEVPSPAPSKKKSKKH
Sbjct: 121 SPPVPVPASSPPVPVPESSPPVPTPIESPPAPETAPPAPVASPPAEVPSPAPSKKKSKKH 180

Query: 185 KAPAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 217
           KAPAPSPALLGPPAPPSEAPG SEEGP+P+PSLDDK
Sbjct: 181 KAPAPSPALLGPPAPPSEAPGGSEEGPTPAPSLDDK 211

[Close]

BLAST of MC01g0900 vs. ExPASy TrEMBL
Match: A0A6J1KVL2 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111496835 PE=4 SV=1)

HSP 1 Score: 265 bits (676), Expect = 2.83e-86
Identity = 181/226 (80.09%), Postives = 188/226 (83.19%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           MGRQS+IALVLICAVVAGVGGQSPAAAPTTTPA  AP AAK+PPPAA+PV PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKYPPPAASPVVPPTNSSPAA 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAAS----------SPPAASVPASSPPAASVPA 124
           AP KPVT APV+TPPA     VAPV SP AS          SPPAASVPASSPPAASVPA
Sbjct: 61  APQKPVTPAPVSTPPA-----VAPVASPPASTPPTASVPASSPPAASVPASSPPAASVPA 120

Query: 125 SSPPVPVPASSPPVPAPVSSPPLPTPTQSPPAPTPTSTP---ESAPLAPVASPPAEVPSP 184
           SSPP  VPASSPPVP P SSPP+P P  SPP PTP  +P   ESAP APVASPPAEVPSP
Sbjct: 121 SSPPATVPASSPPVPVPASSPPVPVPESSPPVPTPIESPPAPESAPPAPVASPPAEVPSP 180

Query: 185 APSKKKSKKHKAPAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 217
           APSKKKSKKHKAPAPSPALLGPPAPPSEAPG SEEGPSP+PSLDDK
Sbjct: 181 APSKKKSKKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPAPSLDDK 221

[Close]

BLAST of MC01g0900 vs. ExPASy TrEMBL
Match: A0A1S3B0X7 (lysine-rich arabinogalactan protein 18-like OS=Cucumis melo OX=3656 GN=LOC103484821 PE=4 SV=1)

HSP 1 Score: 261 bits (667), Expect = 4.89e-85
Identity = 177/223 (79.37%), Postives = 190/223 (85.20%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           MGRQS+IALVLICAVVA VGGQSPAAAPTTTPAA  P AAK+PPPAA+PVSPPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAVVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVP----------A 124
           AP KP T APV+TPPAS+ P+VAPV SP AS+PP ASVPASSPPAASVP          A
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 125 SSPPVPVPASSPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPS 184
           SSPPVPVP SSPPVP PVSSPP+PTPT+SPPAP      ES+P APVASPPAEVP+PAPS
Sbjct: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAP------ESSPPAPVASPPAEVPAPAPS 180

Query: 185 KKKSKKHKAPAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 217
           KK SKKH+APAPSPALLGPPAPPSEAP  SEEGPSPSPSL+DK
Sbjct: 181 KK-SKKHRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDK 216

[Close]

BLAST of MC01g0900 vs. ExPASy TrEMBL
Match: A0A5D3CP79 (Lysine-rich arabinogalactan protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004360 PE=4 SV=1)

HSP 1 Score: 261 bits (667), Expect = 6.80e-85
Identity = 177/223 (79.37%), Postives = 190/223 (85.20%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           MGRQS+IALVLICAVVA VGGQSPAAAPTTTPAA  P AAK+PPPAA+PVSPPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAVVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVP----------A 124
           AP KP T APV+TPPAS+ P+VAPV SP AS+PP ASVPASSPPAASVP          A
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 125 SSPPVPVPASSPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPS 184
           SSPPVPVP SSPPVP PVSSPP+PTPT+SPPAP      ES+P APVASPPAEVP+PAPS
Sbjct: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAP------ESSPPAPVASPPAEVPAPAPS 180

Query: 185 KKKSKKHKAPAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 217
           KK SKKH+APAPSPALLGPPAPPSEAP  SEEGPSPSPSL+DK
Sbjct: 181 KK-SKKHRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDK 216

[Close]

BLAST of MC01g0900 vs. ExPASy TrEMBL
Match: Q9XIV1 (Arabinogalactan protein OS=Cucumis sativus OX=3659 GN=Csa_6G493850 PE=2 SV=1)

HSP 1 Score: 258 bits (659), Expect = 8.29e-84
Identity = 173/223 (77.58%), Postives = 187/223 (83.86%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           MGRQS+IALVLICAVVAGVGGQSPAAAPTTTPAA  P AA +PPPAA+PVS PTN SPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAATYPPPAASPVSTPTNPSPAA 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVP----------A 124
           AP KP T APV+TPPAS+ P+VAPV SP AS+PP ASVPASSPPAASVP          A
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 125 SSPPVPVPASSPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPS 184
           SSPPVPVP SSPPV  PVSSPP+PTPT+SPPAP      ES+P APVASPP EVP+PAPS
Sbjct: 121 SSPPVPVPVSSPPVSVPVSSPPVPTPTESPPAP------ESSPPAPVASPPVEVPAPAPS 180

Query: 185 KKKSKKHKAPAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 217
           KKKSKKH+APAPSPALLGPPAPPSEAP  SEEGP+PSPSL+DK
Sbjct: 181 KKKSKKHRAPAPSPALLGPPAPPSEAPAGSEEGPAPSPSLEDK 217

[Close]

BLAST of MC01g0900 vs. TAIR 10
Match: AT4G37450.1 (arabinogalactan protein 18 )

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21
Identity = 104/219 (47.49%), Postives = 130/219 (59.36%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           M R  L+ + LIC VVAGVGGQSP ++PT           K P   +AP + PT S    
Sbjct: 1   MDRNFLLTVTLICIVVAGVGGQSPISSPT-----------KSPTTPSAPTTSPTKSPAVT 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPAS 124
           +P    TTAP  TP AS+S   +PV SP + +P + S P             PP PVP S
Sbjct: 61  SP----TTAPAKTPTASAS---SPVESPKSPAPVSESSP-------------PPTPVPES 120

Query: 125 SPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPSK-----KKSK 184
           SPPVPAP+ S    +P  SPP P P +    +P APVA+P A+VP+PAPSK     KKSK
Sbjct: 121 SPPVPAPMVS----SPVSSPPVPAPVA---DSPPAPVAAPVADVPAPAPSKHKKTTKKSK 180

Query: 185 KHK-APAPSPALLGPPAPPSEAPGASEEGPSPSPSLDDK 218
           KH+ APAP+P LLGPPAPP+E+PG + +  SP PS DD+
Sbjct: 181 KHQAAPAPAPELLGPPAPPTESPGPNSDAFSPGPSADDQ 181

[Close]

BLAST of MC01g0900 vs. TAIR 10
Match: AT2G14890.2 (arabinogalactan protein 9 )

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09
Identity = 94/212 (44.34%), Postives = 121/212 (57.08%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           M R   IA++ I  ++AGV GQ+P + PT TPA   P     PPPAA P  PP ++ P  
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATPAPPTPTT---PPPAATP--PPVSAPP-- 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPAS 124
               PVTT+P   PP +++P       P A+ PP    P SSPP AS P ++PP   P +
Sbjct: 61  ----PVTTSP---PPVTTAP-------PPANPPP----PVSSPPPASPPPATPP---PVA 120

Query: 125 SPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPSKKKSKKHKAP 184
           SP  P PV+SPP  TP   PP  TP       P AP+ASPPA+VP+PAP+ K      +P
Sbjct: 121 SP--PPPVASPPPATP---PPVATP-------PPAPLASPPAQVPAPAPTTKPD----SP 166

Query: 185 APSPALLGPPAPPSEAPGASEEGPSPSPSLDD 217
           +PSP+   PP P S+APG S +  SP+PS  D
Sbjct: 181 SPSPS-SSPPLPSSDAPGPSTDSISPAPSPTD 166

[Close]

BLAST of MC01g0900 vs. TAIR 10
Match: AT2G14890.1 (arabinogalactan protein 9 )

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09
Identity = 94/212 (44.34%), Postives = 121/212 (57.08%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           M R   IA++ I  ++AGV GQ+P + PT TPA   P     PPPAA P  PP ++ P  
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATPAPPTPTT---PPPAATP--PPVSAPP-- 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPAS 124
               PVTT+P   PP +++P       P A+ PP    P SSPP AS P ++PP   P +
Sbjct: 61  ----PVTTSP---PPVTTAP-------PPANPPP----PVSSPPPASPPPATPP---PVA 120

Query: 125 SPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPSKKKSKKHKAP 184
           SP  P PV+SPP  TP   PP  TP       P AP+ASPPA+VP+PAP+ K      +P
Sbjct: 121 SP--PPPVASPPPATP---PPVATP-------PPAPLASPPAQVPAPAPTTKPD----SP 166

Query: 185 APSPALLGPPAPPSEAPGASEEGPSPSPSLDD 217
           +PSP+   PP P S+APG S +  SP+PS  D
Sbjct: 181 SPSPS-SSPPLPSSDAPGPSTDSISPAPSPTD 166

[Close]

BLAST of MC01g0900 vs. TAIR 10
Match: AT1G68725.1 (arabinogalactan protein 19 )

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07
Identity = 85/212 (40.09%), Postives = 109/212 (51.42%), Query Frame = 0


Query: 12  ALVLICAVVA--GVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSP----AAA 71
           +L+L  A+++   V  Q PAA+P T+   A P     PP  AAP  PPT ++P    A  
Sbjct: 9   SLLLASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAP--PPTTTTPPVSAAQP 68

Query: 72  PLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPASS 131
           P  PVT  P  TP +  +P VAPV SPA   P     P +S P  S P  SPP P P S 
Sbjct: 69  PASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPP-PAPTSP 128

Query: 132 PPVPA-PVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPAPSKKKSK---KH 191
           PP PA P  +P  P P  + P P P S P     +P++ PPA  P+P   K+K K    H
Sbjct: 129 PPTPASPPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHH 188

Query: 192 KAPAPSPALLGPPAPPSEAPGASEEGPSPSPS 214
            APAP+P    PP+PP       +  P+PSP+
Sbjct: 189 HAPAPAPIPPSPPSPP-VLTDPQDTAPAPSPN 216

[Close]

BLAST of MC01g0900 vs. TAIR 10
Match: AT2G23130.2 (arabinogalactan protein 17 )

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07
Identity = 86/220 (39.09%), Postives = 105/220 (47.73%), Query Frame = 0


Query: 5   MGRQSLIALVLICAVVAGVGGQSPAAAPTTTPAAAAPAAAKFPPPAAAPVSPPTNSSPAA 64
           M R  L+ + LIC V   VGGQSPA AP                            SP+ 
Sbjct: 1   MTRNILLTVTLICIVFITVGGQSPATAPI--------------------------HSPST 60

Query: 65  APLKPVTTAPVATPPASSSPSVAPVTSPAASSPPAASVPASSPPAASVPASSPPVPVPAS 124
           +P KP  T              +P  SPAA +P +   PA +P  A  P  +PP P PAS
Sbjct: 61  SPHKPKPT--------------SPAISPAAPTPESTEAPAKTPVEA--PVEAPPSPTPAS 120

Query: 125 SPPVPAPVSSPPLPTPTQSPPAPTPTSTPESAPLAPVASPPAEVPSPA--PSKKKSKKHK 184
           +P +              SPPAP+P +     P AP  +P A+VP+PA    KKK+KKHK
Sbjct: 121 TPQI--------------SPPAPSPEA---DTPSAPEIAPSADVPAPALTKHKKKTKKHK 158

Query: 185 -APAPSPA--LLGPPAPPSEAPGASEEGPSP--SPSLDDK 218
            APAP PA  LL PPAPP EAPG    GPS   SP+ DD+
Sbjct: 181 TAPAPGPASELLSPPAPPGEAPG---PGPSDAFSPAADDQ 158

The following BLAST results are available for this feature:

BLAST of MC01g0900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPR2	2.4e-20	47.49	Lysine-rich arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=AGP18 ...	[more]
Q9C5S0	1.6e-08	44.34	Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1...	[more]
Q9S740	1.5e-06	40.09	Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ...	[more]
O22194	3.4e-06	39.09	Lysine-rich arabinogalactan protein 17 OS=Arabidopsis thaliana OX=3702 GN=AGP17 ...	[more]

BLAST of MC01g0900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517454.1	3.63e-87	81.94	lysine-rich arabinogalactan protein 18-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963306.1	2.08e-86	81.94	lysine-rich arabinogalactan protein 18-like [Cucurbita moschata]	[more]
KAG6595001.1	2.96e-86	81.48	hypothetical protein SDJN03_11554, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023003133.1	5.85e-86	80.09	lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]	[more]
XP_008440341.2	1.01e-84	79.37	PREDICTED: lysine-rich arabinogalactan protein 18-like [Cucumis melo]	[more]

BLAST of MC01g0900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFT1	1.01e-86	81.94	lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1KVL2	2.83e-86	80.09	lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A1S3B0X7	4.89e-85	79.37	lysine-rich arabinogalactan protein 18-like OS=Cucumis melo OX=3656 GN=LOC103484...	[more]
A0A5D3CP79	6.80e-85	79.37	Lysine-rich arabinogalactan protein 18-like OS=Cucumis melo var. makuwa OX=11946...	[more]
Q9XIV1	8.29e-84	77.58	Arabinogalactan protein OS=Cucumis sativus OX=3659 GN=Csa_6G493850 PE=2 SV=1	[more]

BLAST of MC01g0900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37450.1	1.7e-21	47.49	arabinogalactan protein 18	[more]
AT2G14890.2	1.2e-09	44.34	arabinogalactan protein 9	[more]
AT2G14890.1	1.2e-09	44.34	arabinogalactan protein 9	[more]
AT1G68725.1	1.1e-07	40.09	arabinogalactan protein 19	[more]
AT2G23130.2	2.4e-07	39.09	arabinogalactan protein 17	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..100
None	No IPR available	PANTHER	PTHR37209:SF3	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 5..126
None	No IPR available	PANTHER	PTHR37209:SF3	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 88..217
IPR044981	Lysine-rich arabinogalactan protein AGP9/17/18	PANTHER	PTHR37209	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 88..217
IPR044981	Lysine-rich arabinogalactan protein AGP9/17/18	PANTHER	PTHR37209	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 5..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0900.1	MC01g0900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane