Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: utr5CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTATACTATGAACAGAATAATGACGACATAAGATGTTCATTAATGTGATGGAATTAATTTTACCATTTACTTGAGCTCATAATTCCAATTCAGTTAAACGAAAAACATAAAAAAATAGTTCACGGTCAAAATTGTAAAAGTAAAAAATCTTCCTTAAAAAAAAAAAAGTTCAAGTTTTGTCTAAGGTACTGGGCCAAACCAGCCGGGCTGAGCTTTTAACAGTGAAAGTTTGGTCCAGATCCAATTAAGAGAGAAGCATGGTGCTTGCTGAAAATTTTTGGGGGCGAAAATCCGTCAGAAAATTTGAAACGAGGGTGAGCAGTGAGCTCCCTCTCTAGGGTTTTGGAAGAGGGTTCACCGTTTTCCACCCCCAAAATCAAGTATCTGAACCAGTACCTCAAGTGGTTTACCACTATCACGAAGCAATTGCAGAATCACAATGGCGTTTTCGCTGTTCTCAACTCCGCAACCACAGCAGTCATTTCAACCGCAGCCTCAATCACAACCGCAACTTTTTCAGCAGAGCAGCCCATTATTCTCCCAGCAGCAGCCTCAACAATTTCAACTGCAACAGCAGCAGCAGCAGCAACAACAACAACAGCTGCAGTTAATGCAGCAGCAGCAAAAGCAGCAGCAGTTGTTCATCTTTACCAACGATAACGCTCCTGCAAGTTATGGTACCAAGTGGGCGGATCTCCATCCCGATTCGCAGAAAATTCTCCTTCAGATCGAGTATGTGGTTTTGTACTCCCTTGAAAACTTGTTACGTTGTATTGTTTTTAGCTTAATTGTACAGGTAGAAGTTCAAAAGATGTTTGGGGGGGAGGGAGAAATAATGGTATGCTCAAATAAGTCTGTTTTGTCGAAGTTTAAAAAAATTCTGTGTGTAATATTCTTGGACGTTTTATTTATTATTAACCTTTCTCTTTTATGTATCGGCATCTTCTTGTTTACATCTAGGATTTGAACGCTTTGTAATTTTCCATATTATATGGCTATTTAGATACTGTGTCGCTACAGGGAACGAATCTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTATGATTCTTCAGTTTCTAGCGATGGATTTGAGCATGATGCCAGTCGAATTGTTCAGGTTACTTTTGACATTGATCAGCTTGCTTTTCATTTCCTTTCGACTTCACATTGAATAATTATAGGAAAGTTGAGCACACTGAAAATGTATATGTGGGTACTGATATGCATGTGAAAATGCATGCAGCATCGGTCTATTTTGCTCATTTATGACAACTAGAACGCCTTATGAGTAATTGACAGTTGGTATGGCTGTTTGGTGTATTAGGTTCGGATATGATATTCACAGTGATACTAAAGCTTGCTTCTTATTTATTTTCTTAACCTTTGGGTTCATATGGTTGATCTCTATTTTAGTTATCCATTTTATCTCAGAACTAAATATACAATACTTGCCTGAATAGGAAGTGAAACTTTTCCCGACTAGCAAATAGATTGGAAGTTGAATTTCTCAAAAATTGTTTTAAACTGATTTAGCCTCAACAAGTTTTGACATTAATAAGCGATATGTGAGTTGTTACTTGGAAGGAAGATGGTTATACACATATGGATGAACCCTAACAATCTTCCTCACTTCTTTTGTATGGATTTGGAAGGACTCGTACTCCAAAGAAAAAAAAACTATGGATGGGGAGATCCGTCTATCCTTTAATTTTCTGTTGGAAGAGGTGAAGGCACTTTTGTAGCTAGAGGGGGAAGGGCTTACATGACACCTGTTTACTACATGTATCTTAATGTACAATCTCAGCATCTCAGAATAATTATCTATTTTAGATTACTATAGCATCAAATTTCACATTCACCAAACCACAAGGATGCTATTTGCATTGTCCAAAGTTTGATACCTCCTTTTTGATTTCTTATACTCTAAAATTATTTGAAATATTAAGTGTGCCTTTTGCAGGAACTTGGGGGAATTAGTACCTCTACAGAACATCAAAAAGTTTTGCTTCAAGAGCTAATGACTGCTGCAAAAGGGATGCTTTGTAATACAGAAGTTGCTATTCGCTCTTTCATGATGATACGCCCAAGGTTCCTTCATCAGAGTGCAGGAGGTGCTTCAAATCCCACTGCACCATCACAGGTTCCTGGAGCACCATCACCATTAGGATCTAGTGGTCAACCAACATCTACATCAATTGTTCCAGTTTTTGACTTTTACAGTGGCCTCCCAAGAAAACCATCTCCATTTTTGGAGCAAACAGTTTCGAGATTTGAGAAGTATCTTGGTGAATGCCGACAGTGGATCGAAGAGATAGAGCAACTCCTTGTCCTAGATTCTAATCGAAGTGCTTCCAATTCTAGCTCATTGTTTCATTCGCTTCCTAAAATCATGTCAAATGTGCATGAATTCTTTGTTCATGTGGCTGCTAAGGTAGGAGAAATATTGTCCTTAATGAGCATTTATTTATAATCATTAGCGGGCTATTTCATAATGTTTGTCTATTAATTCATATATTTTCCTCTTAGGTTGTCTGATATGTCACTGATGCCGAAATACCCGGTTCTTATTATTGAAGGAATCTTGATTTCTGATAGGATTTTAATAGGTTCGTCTTTGAGGGTATAGTCACTGCTTAGTAAGTTGGTTAGAGGAGAGTGATTGCAATGTTGGTTAAGAGTGTTGGGGTTAGGGGAATATTGAGTGCTTATTCCAAATATATTACATTCCTATCATTTTCCTCCCCTTTCCCCCATTTGTAGAAACAAAAATTTGAGGTTGCTTGTTGGCATCGAGTTTGACTTAAATGATTATAGCATGCTGGGAAACAAAGTCTAGAATTGTTTAAAGTACTGGTCTTTAAGTTTGGGCAATTTCTCCCTCCTATTCTTTCAGAGAGCAAGAAAATCCTTCAACATATCTACATGTGCATGATCACAGAGGAGAGACCGTTGGATGCCACTTATGCAAATTTTTATAACTAATGGCACGTTAAAAATGATTCCTCAGGTTGAGAATATTCACCAGTACATCGAATCAATGAAAGCAGCTTATCTTGCTGATCAGCGTCGCAGAGGGGATGGAAATGATCCATTTCTTGAGGCTGATCGAAGGGAAACTGCACGCCAAGAAGCAGCAGCTAAGAGGGTACATCCAACTTTACATCTGCCTGCAAATTTACAACCATCTACTCAAGCTGCTGGATTGCTTGCAAGCTCAGGTAATCAAGGTGCATCAACAGTACCACAATCGTTTACAGTAGCTACACCAGCTTCTTCTGGGGGTGGATTGTCACTTTTTAGTACACCCTCTGCTCCATCTACTGCATCATCTTCTCTGTTCATGACACCAACCGCATCTGTTCAAACATCCTCTCTATTTAGTTCGTCTGGTGCAACAGCTCCCACAACACTTTTTGGCTCGTCATCAGCACCATTATTTAGTGCTTCTACTACTACTCCCTTTGGTAGTACTGCACCATCTTTTGGTCAATCTGCTTCTGCAGGAAGTTCCTTATTCTCAACACCCTTTGCCTCAGGT
mRNA sequence
TCTTATACTATGAACAGAATAATGACGACATAAGATGTTCATTAATGTGATGGAATTAATTTTACCATTTACTTGAGCTCATAATTCCAATTCAGTTAAACGAAAAACATAAAAAAATAGTTCACGGTCAAAATTGTAAAAGTAAAAAATCTTCCTTAAAAAAAAAAAAGTTCAAGTTTTGTCTAAGGTACTGGGCCAAACCAGCCGGGCTGAGCTTTTAACAGTGAAAGTTTGGTCCAGATCCAATTAAGAGAGAAGCATGGTGCTTGCTGAAAATTTTTGGGGGCGAAAATCCGTCAGAAAATTTGAAACGAGGGTGAGCAGTGAGCTCCCTCTCTAGGGTTTTGGAAGAGGGTTCACCGTTTTCCACCCCCAAAATCAAGTATCTGAACCAGTACCTCAAGTGGTTTACCACTATCACGAAGCAATTGCAGAATCACAATGGCGTTTTCGCTGTTCTCAACTCCGCAACCACAGCAGTCATTTCAACCGCAGCCTCAATCACAACCGCAACTTTTTCAGCAGAGCAGCCCATTATTCTCCCAGCAGCAGCCTCAACAATTTCAACTGCAACAGCAGCAGCAGCAGCAACAACAACAACAGCTGCAGTTAATGCAGCAGCAGCAAAAGCAGCAGCAGTTGTTCATCTTTACCAACGATAACGCTCCTGCAAGTTATGGTACCAAGTGGGCGGATCTCCATCCCGATTCGCAGAAAATTCTCCTTCAGATCGAGGAACGAATCTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTATGATTCTTCAGTTTCTAGCGATGGATTTGAGCATGATGCCAGTCGAATTGTTCAGGAACTTGGGGGAATTAGTACCTCTACAGAACATCAAAAAGTTTTGCTTCAAGAGCTAATGACTGCTGCAAAAGGGATGCTTTGTAATACAGAAGTTGCTATTCGCTCTTTCATGATGATACGCCCAAGGTTCCTTCATCAGAGTGCAGGAGGTGCTTCAAATCCCACTGCACCATCACAGGTTCCTGGAGCACCATCACCATTAGGATCTAGTGGTCAACCAACATCTACATCAATTGTTCCAGTTTTTGACTTTTACAGTGGCCTCCCAAGAAAACCATCTCCATTTTTGGAGCAAACAGTTTCGAGATTTGAGAAGTATCTTGGTGAATGCCGACAGTGGATCGAAGAGATAGAGCAACTCCTTGTCCTAGATTCTAATCGAAGTGCTTCCAATTCTAGCTCATTGTTTCATTCGCTTCCTAAAATCATGTCAAATGTGCATGAATTCTTTGTTCATGTGGCTGCTAAGGTTGAGAATATTCACCAGTACATCGAATCAATGAAAGCAGCTTATCTTGCTGATCAGCGTCGCAGAGGGGATGGAAATGATCCATTTCTTGAGGCTGATCGAAGGGAAACTGCACGCCAAGAAGCAGCAGCTAAGAGGGTACATCCAACTTTACATCTGCCTGCAAATTTACAACCATCTACTCAAGCTGCTGGATTGCTTGCAAGCTCAGGTAATCAAGGTGCATCAACAGTACCACAATCGTTTACAGTAGCTACACCAGCTTCTTCTGGGGGTGGATTGTCACTTTTTAGTACACCCTCTGCTCCATCTACTGCATCATCTTCTCTGTTCATGACACCAACCGCATCTGTTCAAACATCCTCTCTATTTAGTTCGTCTGGTGCAACAGCTCCCACAACACTTTTTGGCTCGTCATCAGCACCATTATTTAGTGCTTCTACTACTACTCCCTTTGGTAGTACTGCACCATCTTTTGGTCAATCTGCTTCTGCAGGAAGTTCCTTATTCTCAACACCCTTTGCCTCAGGT
Coding sequence (CDS)
ATGGCGTTTTCGCTGTTCTCAACTCCGCAACCACAGCAGTCATTTCAACCGCAGCCTCAATCACAACCGCAACTTTTTCAGCAGAGCAGCCCATTATTCTCCCAGCAGCAGCCTCAACAATTTCAACTGCAACAGCAGCAGCAGCAGCAACAACAACAACAGCTGCAGTTAATGCAGCAGCAGCAAAAGCAGCAGCAGTTGTTCATCTTTACCAACGATAACGCTCCTGCAAGTTATGGTACCAAGTGGGCGGATCTCCATCCCGATTCGCAGAAAATTCTCCTTCAGATCGAGGAACGAATCTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTATGATTCTTCAGTTTCTAGCGATGGATTTGAGCATGATGCCAGTCGAATTGTTCAGGAACTTGGGGGAATTAGTACCTCTACAGAACATCAAAAAGTTTTGCTTCAAGAGCTAATGACTGCTGCAAAAGGGATGCTTTGTAATACAGAAGTTGCTATTCGCTCTTTCATGATGATACGCCCAAGGTTCCTTCATCAGAGTGCAGGAGGTGCTTCAAATCCCACTGCACCATCACAGGTTCCTGGAGCACCATCACCATTAGGATCTAGTGGTCAACCAACATCTACATCAATTGTTCCAGTTTTTGACTTTTACAGTGGCCTCCCAAGAAAACCATCTCCATTTTTGGAGCAAACAGTTTCGAGATTTGAGAAGTATCTTGGTGAATGCCGACAGTGGATCGAAGAGATAGAGCAACTCCTTGTCCTAGATTCTAATCGAAGTGCTTCCAATTCTAGCTCATTGTTTCATTCGCTTCCTAAAATCATGTCAAATGTGCATGAATTCTTTGTTCATGTGGCTGCTAAGGTTGAGAATATTCACCAGTACATCGAATCAATGAAAGCAGCTTATCTTGCTGATCAGCGTCGCAGAGGGGATGGAAATGATCCATTTCTTGAGGCTGATCGAAGGGAAACTGCACGCCAAGAAGCAGCAGCTAAGAGGGTACATCCAACTTTACATCTGCCTGCAAATTTACAACCATCTACTCAAGCTGCTGGATTGCTTGCAAGCTCAGGTAATCAAGGTGCATCAACAGTACCACAATCGTTTACAGTAGCTACACCAGCTTCTTCTGGGGGTGGATTGTCACTTTTTAGTACACCCTCTGCTCCATCTACTGCATCATCTTCTCTGTTCATGACACCAACCGCATCTGTTCAAACATCCTCTCTATTTAGTTCGTCTGGTGCAACAGCTCCCACAACACTTTTTGGCTCGTCATCAGCACCATTATTTAGTGCTTCTACTACTACTCCCTTTGGTAGTACTGCACCATCTTTTGGTCAATCTGCTTCTGCAGGAAGTTCCTTATTCTCAACACCCTTTGCCTCAGGT
Protein sequence
MAFSLFSTPQPQQSFQPQPQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQLQLMQQQQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVAIRSFMMIRPRFLHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKPSPFLEQTVSRFEKYLGECRQWIEEIEQLLVLDSNRSASNSSSLFHSLPKIMSNVHEFFVHVAAKVENIHQYIESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPANLQPSTQAAGLLASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPTASVQTSSLFSSSGATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFASG
Homology
BLAST of MC01g0840 vs. ExPASy Swiss-Prot
Match:
Q8RWH9 (Nuclear pore complex protein NUP58 OS=Arabidopsis thaliana OX=3702 GN=NUP58 PE=1 SV=1)
HSP 1 Score: 454.5 bits (1168), Expect = 1.4e-126
Identity = 290/466 (62.23%), Postives = 341/466 (73.18%), Query Frame = 0
Query: 4 SLFSTPQPQQSFQPQPQSQPQLFQQSSPLFSQ-QQPQQFQL-QQQQQQQQQQQLQLMQQQ 63
S+FS QPQQ+ QSQP QQ++ +FSQ QQ QQ L Q QQ QQQQQQL QQQ
Sbjct: 31 SIFSQSQPQQTNSIFSQSQP---QQTNSIFSQPQQQQQTSLFQPQQFQQQQQQLNQQQQQ 90
Query: 64 QKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSS 123
Q QQQL++FTND APA+Y TKWADLHPDSQK+LLQIEE+ILE+R ESQRLDQCSRLYDSS
Sbjct: 91 QVQQQLYLFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEHRSESQRLDQCSRLYDSS 150
Query: 124 VSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVAIRSFMMIRPRFL 183
VSS+GFE DASRIVQELGGI+T+ + QK +L ELM AK ML N E+A+RSFMM++PRF
Sbjct: 151 VSSEGFEFDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLRNAEIAVRSFMMLQPRFP 210
Query: 184 HQSAGG--ASNPTAPSQVPGA-PSPLGSSGQPTSTSIVPVFDFYSGLPRKPSPFLEQTVS 243
H GG S + PSQ G P+P S Q T+ V V DFY G+P+KP+ FL QTV
Sbjct: 211 HWKQGGGVVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDFYRGIPKKPTAFLLQTVV 270
Query: 244 RFEKYLGECRQWIEEIEQLLVLDSNRSASNSSSLFHSLPKIMSNVHEFFVHVAAKVENIH 303
RFEKYL ECRQW+EE+EQLL LDS++ S +SL SLPK+MSNVH+FFVHVAAKVE+IH
Sbjct: 271 RFEKYLNECRQWVEELEQLLALDSDK-YSRHASLLESLPKVMSNVHDFFVHVAAKVESIH 330
Query: 304 QYIESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPA---NLQPSTQ 363
QYIESM+ +YLADQRRRG+ +DPFLEADRRETA+QEAAAKRVHPTLHLPA + QPSTQ
Sbjct: 331 QYIESMRTSYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPASTTSTQPSTQ 390
Query: 364 AAGLLASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPTASVQTSS 423
AGL+ASS G S PQ+ + SSG G S +TP+ S SSSLF TP+++ TSS
Sbjct: 391 VAGLIASSATPGGSNPPQTSVPTSNPSSGAGFSFLNTPA--SGPSSSLFATPSSTAPTSS 450
Query: 424 LFSSSGATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSS 462
LF S T LFGSS A F ST + FG T PS + G +
Sbjct: 451 LFGPSPTPTQTPLFGSSPASTF-GSTQSLFGQTTPSLTMPSQFGGA 489
BLAST of MC01g0840 vs. NCBI nr
Match:
XP_022132956.1 (nuclear pore complex protein NUP58 [Momordica charantia])
HSP 1 Score: 853 bits (2204), Expect = 2.39e-310
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0
Query: 1 MAFSLFSTPQPQQSFQPQPQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQLQLMQQ 60
MAFSLFSTPQPQQSFQPQPQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQLQLMQQ
Sbjct: 1 MAFSLFSTPQPQQSFQPQPQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQLQLMQQ 60
Query: 61 QQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDS 120
QQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDS
Sbjct: 61 QQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDS 120
Query: 121 SVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVAIRSFMMIRPRF 180
SVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVAIRSFMMIRPRF
Sbjct: 121 SVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVAIRSFMMIRPRF 180
Query: 181 LHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKPSPFLEQTVSRF 240
LHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKPSPFLEQTVSRF
Sbjct: 181 LHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKPSPFLEQTVSRF 240
Query: 241 EKYLGECRQWIEEIEQLLVLDSNRSASNSSSLFHSLPKIMSNVHEFFVHVAAKVENIHQY 300
EKYLGECRQWIEEIEQLLVLDSNRSASNSSSLFHSLPKIMSNVHEFFVHVAAKVENIHQY
Sbjct: 241 EKYLGECRQWIEEIEQLLVLDSNRSASNSSSLFHSLPKIMSNVHEFFVHVAAKVENIHQY 300
Query: 301 IESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPANLQPSTQAAGLL 360
IESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPANLQPSTQAAGLL
Sbjct: 301 IESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPANLQPSTQAAGLL 360
Query: 361 ASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPTASVQTSSLFSSS 420
ASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPTASVQTSSLFSSS
Sbjct: 361 ASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPTASVQTSSLFSSS 420
Query: 421 GATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFASG 470
GATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFASG
Sbjct: 421 GATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFASG 470
BLAST of MC01g0840 vs. NCBI nr
Match:
XP_038882193.1 (nuclear pore complex protein NUP58 [Benincasa hispida])
HSP 1 Score: 746 bits (1925), Expect = 7.84e-268
Identity = 431/477 (90.36%), Postives = 442/477 (92.66%), Query Frame = 0
Query: 1 MAFSLFSTPQPQQSFQPQP--QSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQLQLM 60
MAFSLFSTPQPQQ PQ QSQPQLFQQSSPLFSQQ PQQFQLQQQQQQQQQQQ Q
Sbjct: 1 MAFSLFSTPQPQQ---PQQLFQSQPQLFQQSSPLFSQQ-PQQFQLQQQQQQQQQQQQQQQ 60
Query: 61 QQQ----QKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQC 120
QQQ Q+QQQLFIFTND APASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQC
Sbjct: 61 QQQLMQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQC 120
Query: 121 SRLYDSSVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVAIRSFM 180
SRLYDSSVS+DGFE DASRIVQELGGIS STEHQK++LQELMTAAK ML NTEVAIRSFM
Sbjct: 121 SRLYDSSVSNDGFELDASRIVQELGGISASTEHQKIMLQELMTAAKEMLWNTEVAIRSFM 180
Query: 181 MIRPRFLHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKPSPFLE 240
MIRPRFLHQSAGGASNPTAPSQV GA SPLGSSGQPTSTSI PVFDFYSGLPRKPSPFL+
Sbjct: 181 MIRPRFLHQSAGGASNPTAPSQVTGATSPLGSSGQPTSTSITPVFDFYSGLPRKPSPFLQ 240
Query: 241 QTVSRFEKYLGECRQWIEEIEQLLVLDSNRSASNSS-SLFHSLPKIMSNVHEFFVHVAAK 300
QTVSRFEKYLGECRQWIE++EQLLVLDSNRSASNSS SLF SLPKIMSNVHEFFVHVAAK
Sbjct: 241 QTVSRFEKYLGECRQWIEDLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVAAK 300
Query: 301 VENIHQYIESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPANLQPS 360
VE+IHQYIESMK AYLADQRRRGDGN+PFLEADRRETARQEAAAKRVHPTLHLPAN QPS
Sbjct: 301 VESIHQYIESMKTAYLADQRRRGDGNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPS 360
Query: 361 TQAAGLLASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPTASVQT 420
TQAAGLL+SSGN GAST QS TVATPASSGGGLSLFSTPSAPST +SSLFMTPTASVQT
Sbjct: 361 TQAAGLLSSSGNHGASTAQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASVQT 420
Query: 421 SSLFSSSGATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFASG 470
SSLFSSSGA APTTLFGSSSAPLFS S TPFGSTAPSFGQSASAGSSLFSTPFASG
Sbjct: 421 SSLFSSSGAAAPTTLFGSSSAPLFS-SANTPFGSTAPSFGQSASAGSSLFSTPFASG 472
BLAST of MC01g0840 vs. NCBI nr
Match:
XP_023518567.1 (nuclear pore complex protein NUP58-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 741 bits (1913), Expect = 7.06e-266
Identity = 425/482 (88.17%), Postives = 441/482 (91.49%), Query Frame = 0
Query: 1 MAFSLFSTPQ---PQQSFQPQPQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQ-------- 60
MAFSLFSTPQ PQQ FQ QPQSQPQLFQQSS LFSQQ PQQFQLQQQQQQ
Sbjct: 1 MAFSLFSTPQSQQPQQLFQSQPQSQPQLFQQSSSLFSQQ-PQQFQLQQQQQQLQQQQQQQ 60
Query: 61 QQQQQLQLMQQQQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
QQQQQ QLMQQQQ+QQQLFIFTND APASYGTKWADLHPDSQKILLQIEERILEYRDESQ
Sbjct: 61 QQQQQQQLMQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
Query: 121 RLDQCSRLYDSSVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVA 180
RLDQCSRLYDSSVS+DGFE DASRIVQELGGISTSTEHQKVLLQELMT+ KGML NTEVA
Sbjct: 121 RLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTSVKGMLWNTEVA 180
Query: 181 IRSFMMIRPRFLHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKP 240
IRSFMMIRPRFLHQS GGA+NP AP+QVPG SPLGSS QPTSTSIVPVFDFYSGLP+KP
Sbjct: 181 IRSFMMIRPRFLHQSTGGATNPAAPTQVPGVTSPLGSSVQPTSTSIVPVFDFYSGLPKKP 240
Query: 241 SPFLEQTVSRFEKYLGECRQWIEEIEQLLVLDSNRSASNS-SSLFHSLPKIMSNVHEFFV 300
SPFL+QTVSRFEKYLGECRQWIEE+EQLLV +SNRSASNS SSLFHSLPKIMSNVHEFF+
Sbjct: 241 SPFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEFFI 300
Query: 301 HVAAKVENIHQYIESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPA 360
HVAAKVE+IHQYI+SMKAAYLADQRRRGD N+PFLEADRRETARQEA AKR HPTLHLPA
Sbjct: 301 HVAAKVESIHQYIDSMKAAYLADQRRRGDVNNPFLEADRRETARQEAVAKRAHPTLHLPA 360
Query: 361 NLQPSTQAAGLLASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPT 420
N QPSTQA G+LASSGN GAST PQS TVATPASS GGLSLFSTPSAP+TASSSLFMTPT
Sbjct: 361 NSQPSTQATGVLASSGNHGASTAPQSSTVATPASSAGGLSLFSTPSAPATASSSLFMTPT 420
Query: 421 ASVQTSSLFSSSGATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFA 470
ASVQTSSLFSSSGA APT+LFGSSSAPLFS S TPFGSTAPSFGQSASAG SLFSTPFA
Sbjct: 421 ASVQTSSLFSSSGAAAPTSLFGSSSAPLFS-SANTPFGSTAPSFGQSASAGGSLFSTPFA 480
BLAST of MC01g0840 vs. NCBI nr
Match:
KAG6595057.1 (Nuclear pore complex protein NUP58, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 741 bits (1912), Expect = 1.00e-265
Identity = 424/482 (87.97%), Postives = 441/482 (91.49%), Query Frame = 0
Query: 1 MAFSLFSTPQPQQS---FQPQPQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQ-------- 60
MAFSLFSTPQPQQ+ FQ QPQSQPQLFQQSS LFSQQ PQQFQLQQQQQQ
Sbjct: 1 MAFSLFSTPQPQQAQQLFQSQPQSQPQLFQQSSSLFSQQ-PQQFQLQQQQQQLQQQQQQQ 60
Query: 61 QQQQQLQLMQQQQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
QQQQQ QLMQQQQ+QQQLFIFTND APASYGTKWADLHPDSQKILLQIEERILEYRDESQ
Sbjct: 61 QQQQQQQLMQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
Query: 121 RLDQCSRLYDSSVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVA 180
RLDQCSRLYDSSVS+DGFE DASRIVQELGGISTSTEHQKVLLQELMT+ KGML NTEVA
Sbjct: 121 RLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTSVKGMLWNTEVA 180
Query: 181 IRSFMMIRPRFLHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKP 240
IRSFMMIRPRFLHQS GGA+NP AP+QVPG SPLGSS QPTSTSIVPVFDFYSGLP+KP
Sbjct: 181 IRSFMMIRPRFLHQSTGGATNPAAPTQVPGVTSPLGSSVQPTSTSIVPVFDFYSGLPKKP 240
Query: 241 SPFLEQTVSRFEKYLGECRQWIEEIEQLLVLDSNRSASNS-SSLFHSLPKIMSNVHEFFV 300
SPFL+QTVSRFEKYLGECRQWIEE+EQLLV +SNRSASNS SSLFHSLPKIMSNVHEFF+
Sbjct: 241 SPFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEFFI 300
Query: 301 HVAAKVENIHQYIESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPA 360
HVAAKVE+IHQYI+SMKAAYLADQRRRGD N+PFLEADRRETARQEA AKR HPTLHLPA
Sbjct: 301 HVAAKVESIHQYIDSMKAAYLADQRRRGDVNNPFLEADRRETARQEAVAKRAHPTLHLPA 360
Query: 361 NLQPSTQAAGLLASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPT 420
N QPSTQA G+LASSGN GAST PQS TV TPASS GGLSLFSTPSAP+TASSSLFMTPT
Sbjct: 361 NSQPSTQATGVLASSGNHGASTAPQSSTVVTPASSAGGLSLFSTPSAPATASSSLFMTPT 420
Query: 421 ASVQTSSLFSSSGATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFA 470
ASVQTSSLFSSSGA APT+LFGSSSAPLFS S TPFGSTAPSFGQSASAG SLFSTPFA
Sbjct: 421 ASVQTSSLFSSSGAAAPTSLFGSSSAPLFS-SANTPFGSTAPSFGQSASAGGSLFSTPFA 480
BLAST of MC01g0840 vs. NCBI nr
Match:
XP_004141933.1 (nuclear pore complex protein NUP58 [Cucumis sativus] >KGN48489.1 hypothetical protein Csa_004153 [Cucumis sativus])
HSP 1 Score: 739 bits (1908), Expect = 3.78e-265
Identity = 424/482 (87.97%), Postives = 440/482 (91.29%), Query Frame = 0
Query: 1 MAFSLFSTPQPQQSFQPQP--QSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQLQ-- 60
MAFSLFSTPQPQQ PQ QSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQ Q
Sbjct: 1 MAFSLFSTPQPQQ---PQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQ 60
Query: 61 -------LMQQQQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
+ QQQQ+QQQLFIFTND APASYGTKWADLHPDSQKILLQIEERILEYRDESQ
Sbjct: 61 QQQQQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
Query: 121 RLDQCSRLYDSSVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVA 180
RLDQCSRLYDSSVS+DGFE DASRIVQELGGIS STEHQKV+LQELM AAK ML NTEVA
Sbjct: 121 RLDQCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVA 180
Query: 181 IRSFMMIRPRFLHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKP 240
IRSFMMIRPRFLHQSAGGASNPTAPSQVPGA +PLGSSGQPTSTSI PVFDFYSGLPRKP
Sbjct: 181 IRSFMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKP 240
Query: 241 SPFLEQTVSRFEKYLGECRQWIEEIEQLLVLDSNRSASNSSS-LFHSLPKIMSNVHEFFV 300
SPFL+QTVSRFEKYL ECRQWIE++EQLLVLDSNRSASNSSS LF SLPKIMSNVHEFFV
Sbjct: 241 SPFLQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFV 300
Query: 301 HVAAKVENIHQYIESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPA 360
HVA+KVE+IHQYIESMK+AYLADQRRRGDGN+PFLEADRRETARQEAAAKR HPTLHLP
Sbjct: 301 HVASKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPT 360
Query: 361 NLQPSTQAAGLLASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPT 420
N QPSTQA GLLA+SGN GASTV QS TVATPASSGGGLSLFSTPSAPST +SSLFMTPT
Sbjct: 361 NSQPSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPT 420
Query: 421 ASVQTSSLFSSSGATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFA 470
ASVQTSSLF SS AP+TLFGSSSAPLFS S +TPFGSTAPSFGQSASAGSSLFSTPFA
Sbjct: 421 ASVQTSSLFGSSSVAAPSTLFGSSSAPLFS-SASTPFGSTAPSFGQSASAGSSLFSTPFA 478
BLAST of MC01g0840 vs. ExPASy TrEMBL
Match:
A0A6J1BTQ0 (nuclear pore complex protein NUP58 OS=Momordica charantia OX=3673 GN=LOC111005673 PE=4 SV=1)
HSP 1 Score: 853 bits (2204), Expect = 1.16e-310
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0
Query: 1 MAFSLFSTPQPQQSFQPQPQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQLQLMQQ 60
MAFSLFSTPQPQQSFQPQPQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQLQLMQQ
Sbjct: 1 MAFSLFSTPQPQQSFQPQPQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQLQLMQQ 60
Query: 61 QQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDS 120
QQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDS
Sbjct: 61 QQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDS 120
Query: 121 SVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVAIRSFMMIRPRF 180
SVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVAIRSFMMIRPRF
Sbjct: 121 SVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVAIRSFMMIRPRF 180
Query: 181 LHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKPSPFLEQTVSRF 240
LHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKPSPFLEQTVSRF
Sbjct: 181 LHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKPSPFLEQTVSRF 240
Query: 241 EKYLGECRQWIEEIEQLLVLDSNRSASNSSSLFHSLPKIMSNVHEFFVHVAAKVENIHQY 300
EKYLGECRQWIEEIEQLLVLDSNRSASNSSSLFHSLPKIMSNVHEFFVHVAAKVENIHQY
Sbjct: 241 EKYLGECRQWIEEIEQLLVLDSNRSASNSSSLFHSLPKIMSNVHEFFVHVAAKVENIHQY 300
Query: 301 IESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPANLQPSTQAAGLL 360
IESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPANLQPSTQAAGLL
Sbjct: 301 IESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPANLQPSTQAAGLL 360
Query: 361 ASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPTASVQTSSLFSSS 420
ASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPTASVQTSSLFSSS
Sbjct: 361 ASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPTASVQTSSLFSSS 420
Query: 421 GATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFASG 470
GATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFASG
Sbjct: 421 GATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFASG 470
BLAST of MC01g0840 vs. ExPASy TrEMBL
Match:
A0A0A0KI61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490040 PE=4 SV=1)
HSP 1 Score: 739 bits (1908), Expect = 1.83e-265
Identity = 424/482 (87.97%), Postives = 440/482 (91.29%), Query Frame = 0
Query: 1 MAFSLFSTPQPQQSFQPQP--QSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQLQ-- 60
MAFSLFSTPQPQQ PQ QSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQ Q
Sbjct: 1 MAFSLFSTPQPQQ---PQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQ 60
Query: 61 -------LMQQQQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
+ QQQQ+QQQLFIFTND APASYGTKWADLHPDSQKILLQIEERILEYRDESQ
Sbjct: 61 QQQQQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
Query: 121 RLDQCSRLYDSSVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVA 180
RLDQCSRLYDSSVS+DGFE DASRIVQELGGIS STEHQKV+LQELM AAK ML NTEVA
Sbjct: 121 RLDQCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVA 180
Query: 181 IRSFMMIRPRFLHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKP 240
IRSFMMIRPRFLHQSAGGASNPTAPSQVPGA +PLGSSGQPTSTSI PVFDFYSGLPRKP
Sbjct: 181 IRSFMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKP 240
Query: 241 SPFLEQTVSRFEKYLGECRQWIEEIEQLLVLDSNRSASNSSS-LFHSLPKIMSNVHEFFV 300
SPFL+QTVSRFEKYL ECRQWIE++EQLLVLDSNRSASNSSS LF SLPKIMSNVHEFFV
Sbjct: 241 SPFLQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFV 300
Query: 301 HVAAKVENIHQYIESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPA 360
HVA+KVE+IHQYIESMK+AYLADQRRRGDGN+PFLEADRRETARQEAAAKR HPTLHLP
Sbjct: 301 HVASKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPT 360
Query: 361 NLQPSTQAAGLLASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPT 420
N QPSTQA GLLA+SGN GASTV QS TVATPASSGGGLSLFSTPSAPST +SSLFMTPT
Sbjct: 361 NSQPSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPT 420
Query: 421 ASVQTSSLFSSSGATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFA 470
ASVQTSSLF SS AP+TLFGSSSAPLFS S +TPFGSTAPSFGQSASAGSSLFSTPFA
Sbjct: 421 ASVQTSSLFGSSSVAAPSTLFGSSSAPLFS-SASTPFGSTAPSFGQSASAGSSLFSTPFA 478
BLAST of MC01g0840 vs. ExPASy TrEMBL
Match:
A0A6J1HHG2 (nuclear pore complex protein NUP58-like OS=Cucurbita moschata OX=3662 GN=LOC111463519 PE=4 SV=1)
HSP 1 Score: 736 bits (1899), Expect = 4.62e-264
Identity = 422/482 (87.55%), Postives = 439/482 (91.08%), Query Frame = 0
Query: 1 MAFSLFSTPQPQQS---FQPQPQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQ------- 60
MAFSLFSTPQPQQ FQ QPQSQPQLFQQSS LFSQQ PQQFQLQQQQQQQ
Sbjct: 1 MAFSLFSTPQPQQPQQLFQSQPQSQPQLFQQSSSLFSQQ-PQQFQLQQQQQQQLQQQQQQ 60
Query: 61 -QQQQLQLMQQQQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
QQQQ QLMQQQQ+QQQLFIFTND APASYGTKWADLHPDSQKILLQIEERILEYRDESQ
Sbjct: 61 QQQQQQQLMQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
Query: 121 RLDQCSRLYDSSVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVA 180
RLDQCSRLYDSSVS+DGFE DASRIVQELGGISTSTEHQKVLLQELMT+ KGML NTEVA
Sbjct: 121 RLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTSVKGMLWNTEVA 180
Query: 181 IRSFMMIRPRFLHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKP 240
IRSFMMI PRFLHQS GGA+NP P+QVPG SPLGSS QPTSTSIVPVFDFYSGLP+KP
Sbjct: 181 IRSFMMICPRFLHQSTGGATNPAVPTQVPGVTSPLGSSVQPTSTSIVPVFDFYSGLPKKP 240
Query: 241 SPFLEQTVSRFEKYLGECRQWIEEIEQLLVLDSNRSASNS-SSLFHSLPKIMSNVHEFFV 300
SPFL+QTVSRFEKYLGECRQWIEE+EQLLV +SNRSASNS SSLFHSLPKIMSNVHEFF+
Sbjct: 241 SPFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEFFI 300
Query: 301 HVAAKVENIHQYIESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPA 360
HVAAKVE+IHQYI+SMKAAYLADQRRRGD N+PFLEADRRETARQEA AKR HPTLHLPA
Sbjct: 301 HVAAKVESIHQYIDSMKAAYLADQRRRGDVNNPFLEADRRETARQEAVAKRAHPTLHLPA 360
Query: 361 NLQPSTQAAGLLASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPT 420
N QPSTQA G+LASSGN GAST PQS T+ATPASS GGLSLFSTPSAP+TASSSLFMTPT
Sbjct: 361 NSQPSTQATGVLASSGNHGASTAPQSSTLATPASSAGGLSLFSTPSAPATASSSLFMTPT 420
Query: 421 ASVQTSSLFSSSGATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFA 470
ASVQTSSLFSSSGA APT+LFGSSSAPLFS S TPFGSTAPSFGQSASAG SLFSTPFA
Sbjct: 421 ASVQTSSLFSSSGAAAPTSLFGSSSAPLFS-SANTPFGSTAPSFGQSASAGGSLFSTPFA 480
BLAST of MC01g0840 vs. ExPASy TrEMBL
Match:
A0A6J1KTN6 (nuclear pore complex protein NUP58-like OS=Cucurbita maxima OX=3661 GN=LOC111497125 PE=4 SV=1)
HSP 1 Score: 734 bits (1896), Expect = 1.42e-263
Identity = 421/484 (86.98%), Postives = 437/484 (90.29%), Query Frame = 0
Query: 1 MAFSLFSTPQPQQS---FQPQPQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQ-------- 60
MAFSLFSTPQPQQ FQ QPQSQPQLFQQSS LFSQQ PQ FQLQQQQQQ
Sbjct: 1 MAFSLFSTPQPQQPQQLFQSQPQSQPQLFQQSSSLFSQQ-PQPFQLQQQQQQLQQQQQHQ 60
Query: 61 --QQQQQLQLMQQQQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDE 120
QQQQQ QLMQQQQ+ QQLFIFTND APASYGTKWADLHPDSQKILLQIEERILEYRDE
Sbjct: 61 QQQQQQQQQLMQQQQQPQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDE 120
Query: 121 SQRLDQCSRLYDSSVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTE 180
SQRLDQCSRLYDSSVS+DGFE DASRIVQELGGISTSTEHQKVLLQELM + KGML NTE
Sbjct: 121 SQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMISVKGMLWNTE 180
Query: 181 VAIRSFMMIRPRFLHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPR 240
VAIRSFMMIRPRF+HQS GGA+NP AP+QVPG SPLGSSGQPTSTSIVPVFDFYSGLP+
Sbjct: 181 VAIRSFMMIRPRFVHQSTGGATNPAAPTQVPGVTSPLGSSGQPTSTSIVPVFDFYSGLPK 240
Query: 241 KPSPFLEQTVSRFEKYLGECRQWIEEIEQLLVLDSNRSASNS-SSLFHSLPKIMSNVHEF 300
KPSPFL+QTVSRFEKYLGECRQWIEE+EQLLV +SNRSASNS SSLFHSLPKIMSNVHEF
Sbjct: 241 KPSPFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEF 300
Query: 301 FVHVAAKVENIHQYIESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHL 360
F+HVAAKVE+IHQYI+SMKAAYLADQRRRGD N+PFLEADRRETARQE AKR HPTLHL
Sbjct: 301 FIHVAAKVESIHQYIDSMKAAYLADQRRRGDVNNPFLEADRRETARQETVAKRAHPTLHL 360
Query: 361 PANLQPSTQAAGLLASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMT 420
PAN QPSTQA GLLASSGN GAST PQS TVATPASS GGLSLFSTPS P+TASSSLFMT
Sbjct: 361 PANSQPSTQATGLLASSGNHGASTAPQSSTVATPASSAGGLSLFSTPSGPATASSSLFMT 420
Query: 421 PTASVQTSSLFSSSGATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTP 470
PTASVQTSSLFSSSGATAPT+LFGSSSAPLFS S TPFGSTAPSFGQSAS G SLFSTP
Sbjct: 421 PTASVQTSSLFSSSGATAPTSLFGSSSAPLFS-SANTPFGSTAPSFGQSASTGGSLFSTP 480
BLAST of MC01g0840 vs. ExPASy TrEMBL
Match:
A0A1S3B190 (nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484746 PE=4 SV=1)
HSP 1 Score: 732 bits (1889), Expect = 1.06e-262
Identity = 422/475 (88.84%), Postives = 439/475 (92.42%), Query Frame = 0
Query: 1 MAFSLFSTPQPQQSFQPQP--QSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQ--LQ 60
MAFSLFSTPQPQQ PQ QSQPQLFQQSSPLFSQQQPQQFQLQQQQQ QQQQQ +Q
Sbjct: 1 MAFSLFSTPQPQQ---PQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQPQQQQQQLMQ 60
Query: 61 LMQQQQKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSR 120
QQQQ+QQQLFIFTND APASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSR
Sbjct: 61 QQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSR 120
Query: 121 LYDSSVSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVAIRSFMMI 180
LYDSSVS+DGFE DASRIVQELGGIS STEHQKV+LQELM AAK ML NTEVAIRSFMMI
Sbjct: 121 LYDSSVSNDGFELDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRSFMMI 180
Query: 181 RPRFLHQSAGGASNPTAPSQVPGAPSPLGSSGQPTSTSIVPVFDFYSGLPRKPSPFLEQT 240
RPRFLHQSA GASNPTAPSQV GA +PLG SGQPTSTSI PVFDFYSGLPRKPSPFL+QT
Sbjct: 181 RPRFLHQSARGASNPTAPSQVSGATTPLGPSGQPTSTSIAPVFDFYSGLPRKPSPFLQQT 240
Query: 241 VSRFEKYLGECRQWIEEIEQLLVLDSNRSASNSSS-LFHSLPKIMSNVHEFFVHVAAKVE 300
VSRFEKYLGECRQWIE++EQLL+LDSNRSASNSSS LF SLPKIMSNVHEFFVHVAAKVE
Sbjct: 241 VSRFEKYLGECRQWIEDLEQLLILDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVAAKVE 300
Query: 301 NIHQYIESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPANLQPSTQ 360
+IHQYIESMK+AYLADQRRRGDGN+PFLEADRRETARQEAAAKR HPTLHLPAN QPSTQ
Sbjct: 301 SIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPANSQPSTQ 360
Query: 361 AAGLLASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPTASVQTSS 420
AAGLLA+SGN GAST+ QS TVATPASSGGGLSLFSTPSAPST +SSLFMTPTASVQTSS
Sbjct: 361 AAGLLANSGNHGASTIQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASVQTSS 420
Query: 421 LFSSSGATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSSLFSTPFASG 470
LF SS A AP+ LFGSSSAPLFS S +TPFGSTAPSFGQSASAGSSLFSTPFASG
Sbjct: 421 LFGSSSAAAPS-LFGSSSAPLFS-SASTPFGSTAPSFGQSASAGSSLFSTPFASG 470
BLAST of MC01g0840 vs. TAIR 10
Match:
AT4G37130.1 (hydroxyproline-rich glycoprotein family protein )
HSP 1 Score: 454.5 bits (1168), Expect = 1.0e-127
Identity = 290/466 (62.23%), Postives = 341/466 (73.18%), Query Frame = 0
Query: 4 SLFSTPQPQQSFQPQPQSQPQLFQQSSPLFSQ-QQPQQFQL-QQQQQQQQQQQLQLMQQQ 63
S+FS QPQQ+ QSQP QQ++ +FSQ QQ QQ L Q QQ QQQQQQL QQQ
Sbjct: 31 SIFSQSQPQQTNSIFSQSQP---QQTNSIFSQPQQQQQTSLFQPQQFQQQQQQLNQQQQQ 90
Query: 64 QKQQQLFIFTNDNAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSS 123
Q QQQL++FTND APA+Y TKWADLHPDSQK+LLQIEE+ILE+R ESQRLDQCSRLYDSS
Sbjct: 91 QVQQQLYLFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEHRSESQRLDQCSRLYDSS 150
Query: 124 VSSDGFEHDASRIVQELGGISTSTEHQKVLLQELMTAAKGMLCNTEVAIRSFMMIRPRFL 183
VSS+GFE DASRIVQELGGI+T+ + QK +L ELM AK ML N E+A+RSFMM++PRF
Sbjct: 151 VSSEGFEFDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLRNAEIAVRSFMMLQPRFP 210
Query: 184 HQSAGG--ASNPTAPSQVPGA-PSPLGSSGQPTSTSIVPVFDFYSGLPRKPSPFLEQTVS 243
H GG S + PSQ G P+P S Q T+ V V DFY G+P+KP+ FL QTV
Sbjct: 211 HWKQGGGVVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDFYRGIPKKPTAFLLQTVV 270
Query: 244 RFEKYLGECRQWIEEIEQLLVLDSNRSASNSSSLFHSLPKIMSNVHEFFVHVAAKVENIH 303
RFEKYL ECRQW+EE+EQLL LDS++ S +SL SLPK+MSNVH+FFVHVAAKVE+IH
Sbjct: 271 RFEKYLNECRQWVEELEQLLALDSDK-YSRHASLLESLPKVMSNVHDFFVHVAAKVESIH 330
Query: 304 QYIESMKAAYLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLHLPA---NLQPSTQ 363
QYIESM+ +YLADQRRRG+ +DPFLEADRRETA+QEAAAKRVHPTLHLPA + QPSTQ
Sbjct: 331 QYIESMRTSYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPASTTSTQPSTQ 390
Query: 364 AAGLLASSGNQGASTVPQSFTVATPASSGGGLSLFSTPSAPSTASSSLFMTPTASVQTSS 423
AGL+ASS G S PQ+ + SSG G S +TP+ S SSSLF TP+++ TSS
Sbjct: 391 VAGLIASSATPGGSNPPQTSVPTSNPSSGAGFSFLNTPA--SGPSSSLFATPSSTAPTSS 450
Query: 424 LFSSSGATAPTTLFGSSSAPLFSASTTTPFGSTAPSFGQSASAGSS 462
LF S T LFGSS A F ST + FG T PS + G +
Sbjct: 451 LFGPSPTPTQTPLFGSSPASTF-GSTQSLFGQTTPSLTMPSQFGGA 489
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8RWH9 | 1.4e-126 | 62.23 | Nuclear pore complex protein NUP58 OS=Arabidopsis thaliana OX=3702 GN=NUP58 PE=1... | [more] |
Match Name | E-value | Identity | Description | |
XP_022132956.1 | 2.39e-310 | 100.00 | nuclear pore complex protein NUP58 [Momordica charantia] | [more] |
XP_038882193.1 | 7.84e-268 | 90.36 | nuclear pore complex protein NUP58 [Benincasa hispida] | [more] |
XP_023518567.1 | 7.06e-266 | 88.17 | nuclear pore complex protein NUP58-like [Cucurbita pepo subsp. pepo] | [more] |
KAG6595057.1 | 1.00e-265 | 87.97 | Nuclear pore complex protein NUP58, partial [Cucurbita argyrosperma subsp. soror... | [more] |
XP_004141933.1 | 3.78e-265 | 87.97 | nuclear pore complex protein NUP58 [Cucumis sativus] >KGN48489.1 hypothetical pr... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BTQ0 | 1.16e-310 | 100.00 | nuclear pore complex protein NUP58 OS=Momordica charantia OX=3673 GN=LOC11100567... | [more] |
A0A0A0KI61 | 1.83e-265 | 87.97 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490040 PE=4 SV=1 | [more] |
A0A6J1HHG2 | 4.62e-264 | 87.55 | nuclear pore complex protein NUP58-like OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
A0A6J1KTN6 | 1.42e-263 | 86.98 | nuclear pore complex protein NUP58-like OS=Cucurbita maxima OX=3661 GN=LOC111497... | [more] |
A0A1S3B190 | 1.06e-262 | 88.84 | nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034... | [more] |
Match Name | E-value | Identity | Description | |
AT4G37130.1 | 1.0e-127 | 62.23 | hydroxyproline-rich glycoprotein family protein | [more] |