MC01g0733 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0733
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RNA-binding protein 39 isoform X1
Location	MC01: 13486544 .. 13494358 (-)
RNA-Seq Expression	MC01g0733
Synteny	MC01g0733

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTCTTAAGTGAACGCTAATTTTCAATTATAGAATCTGATCTGTTCCCATCCGTATAAAAAACCCCCTTAAGTCTTTCACTCGCGGCCGGATTATTGACAACTCCAAGCCAACCAATCGTTCTTCTCCTGGAAACCCCTTAAAAAACCCTAGAATTTTCAATTTTATCGAAATTTCGACCCTCCTGGCTCAGCTGATTCTGTTCCAATCCAAGTTCCGGCGAGATCTCAAGGTTCCATTTCGCGGGTCTTCAATCGGGCCGGTGAATTTCCGAAGATTCGATGGACTTCGACGAGTATGATTACTTGGAGAAAGCTGTGGAGGACCAGGACAATAGGGACTCCAAGAAGGCGAAGAAGAATGAGAGTGAGAGGAATGAGAAAAGCAGCAGAAAGAGAGAGGTAGACGAGGAAGATGGTTCCGGTGGCCGCGAGGATGAGGAGGTGAAGGTCAAGAGGTCGAGAAGCGAGCATGAAAATGGGAAGGAGGACAGGGATCAGTCGGGCCGAGGGAGGGATCGGCATCGGAGAGATAGAGAGGAAGAAACAGATGCGGGAAAAGAGAGGAACCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAGAGGGATAGAGACAGGAACAGAGAGGATAGAGATAGAGAGAGACACAAGGAGAAGGAGAGGGAGAGAGACAGGGACAGAAGGGATAAGGATAGAGATAGAGAGAGACACAAGGAGAAGGAGAGGGAGAGAGACAAGGATAGAAGGGACAAGGAGAGGGACAAGGATAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGAGAGAGAAAGGAGAGATAGGGAGAGGAGGGAGCGGGAAAGAGAAGAGGAGAGATCGCGGCGAAGCAGGAGTCGGTCTGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAGAACAGGTACCAGTTCGATCCTGTGTTCTTTGTTGACTGTGATCTTGAAAGCTATCCGTTGACTGTTGGGTGTTGCTTGTATAGATTTATTGGTTTGCTTGTTACTCGTTATTCTTGAAAAGTGTGGTGTGTAAACTTTGGTAATTGCTAGTTGATATCTTCTTTAAACTTGAAATTGTCATATTAAACAACGTGGCATTGTATCTAGTTAGATTAGAATCCGTTTTATGCTCTGGGATTTGAAACGGGTAAATATTAGAGCTAATTCCCAGGCCATTGGGCTGACATTGATAGGACTAGATATTTGATTGAAATTAGGTTCATTTTCAAACTTGGCAACGGCAGTAGATTATTATTATTTTTGTTTGCTTCGGTTGAAAAGAAATAAACATTAGGATTTTCATTGATAAACACGAGTTTTGTTGATTTTTGTGATTTTTGTGAGATTATACAGTGTACTGCATCAACTTGGAGTGCTCTACAGGCTACACAACACTTGTATAACTTCTCTGATTCCAATATCAACTTGTGTTTGGTTACCTCTTTTACGCAAGGGGATTCCTCATCTCCTAGGACATTAAGTTCTTTTTTCTCGTCTGGTGAAAGCTTCTGTTTCTTGATAATAATTTTGTTTGGAATGGGATAGATTTAAGGGAATAAAAAAATGTTTTAACTTTTAATGGGAATAAGAAAAGCCGAGTCGTTTTTAATTTCTTAAAGATTTTTTTGTTTAAATTGTTATGTTGTCTTTCATCTTTTCCCTGATGTTTTGGATGTGCCAATGGCAGGAGAATGAAGGAAAAGAAAGACATGGTGGAGCCTGAAGCTGATCCAGAGAGGGATCAAAGAACTGTATTTGCTTATCAGGTTGATGTCCTCTTCTGTAAATTTCCTCACCTTTTACGTATTATATTGTGCTGATTATTTTCGTTATCCTTTATATTCTTCGTACAGATGCCTTTGAAGGCCACTGAGAGAGATGTTTACGAATTCTTTTCAAAAGCAGGAAAGGTATTTGAAACTTATTACTGAAGAGAAGCATTTGAGTGTTTATTTTTAATTTTTGTTGAAATTTAACAATTAAAGATACGAGCAGTCATGCTTTCATCTATAACTTCTGTGTGCCATGCCCCCTGCACATGTTCACCTCTGTAACATGGAGCAGAATAGATACATTTTTGTTGCAATGTTATTGCTACAAACGTTATGATTGCATACATATTGAGATAGATTTGCTTCGTATTGCAGTTACTGTTCCTCTGCCTTCAGTTTCGAAACTATAATCAATTTCTTCTATCTCAACATTCTGTTTATATGGGGTGAGTGAAAATGTATATATGAGTTCTGTCGTGATCTCATTGATGGCCGGATGGTGCTTTGCCTCGAGTGTAAAGAATGGGAACCTTTATTGCTTTTTCTCTTTGCTGGCTTCCTAATAACCTGCACTTGTCGTTCTTTCTATTTTCAGGTGAGAGATGTACGGCTGATTATGGACAGGAATTCTAGACGGTCAAAAGGAGTTGGGTATGTGGTTTTGGGATGAGTAATTTTTGTATCCTATGCTTGTAATCTTGTTAATATGGTTTATTAACATAATAGTTTTCAAGTATCAAATTTAACTGTATTTTTAAATGAACTAGAACTAGCAATGCGATAATGATGAGGGATGGTGGGAATACAATGCAGTCATGTTTAATCAATTCATGCTGCTTGTTCAAGGTAGATAACATAAACCTGAGGTTTCCTTTGATGTTTTCCCCATCGTACTCCTAATTTTGCTCCTCTATGTTTTTGTGCAGATAAGAAACAGTCCTAACTCCTATGACTCTGTTATCTCTGGTCTTGGTTTTAGATTCATCTCACTCTACTATAAAATATCCTAGTTCAAATTAACTTTCTGACCTTGATTTGTGACGCTTTATTAAAATAATCATGCTTGGTCTTGTATCATCTTCAATCATTGCTTCTCTTCCCTATTTTCTTCTGTTTTTTCCTTGGAAGAATGCATCAAGGGCTCTTGCTTGTTTTTTCCTCTATCATCTTGCTTTTTTATAAAAATTAAAAAAAAGGGAAATTGGTCTTCTATGGTATTTAGACTTCCTCACAGTACTTATTGTCTGATGATTTTCAATAATGACTTTGTTTGGGGATTGATTTCGGTATGCAAATGTGCTCATTGAAAAGATTAGTAAGGTGGGTGAATAGTCACCGTATGATCCCCTCCCTCTTCTAGTTCTGGTCTACACTGGTCATCTGCCATTTGGCTCTGTGTTGCCTCTTTATTTGATGAACTGAACTGTTTGTCTAATCAGTCAGAAGAAACCCAGAGGTCTCTGCACTTTGTGTATTTTGTTTCTCTGAGGCTTTTTAAGTTTTGTTTCTTATCTTTATTGTCTCATTTTCTAATAAGTTTACTTTGAGGCGTTGGTGAAACTGCAGGTATGTTGAATTTTATGATGCAATGTCTGTGCCCATGGCTATCGCCCTCTCTGGTCAACTACTTCTTGGCCAACCTGTTATGGTTAAACCTTCAGAGGCTGAAAAGAATCTTGTTCAATCAAATACGTCAGGCGCCTCTGGTGCAGGGCCATATGGTGCAGTAGACAGGAAACTTTATGTTGGAAATTTACATTTCAACATGACTGAGACTCACCTTAGAGAGGTATTAAGGCCAACTAATCTATACAGTTTTATCTAAAGCCATTCACATTTGATTCCTCTCATATGGAGTTATTTTCTATACAAGTGAAAAATGTAGACCGTCATTGAACAAGAAACAATTTTATGCGCCAATATCAATTACGAAAGTATATGCAGTGAATATGGTTTTACTGTTGTAAAATTATAGTTAATGGATAATTGATGCCTTGTCTTTGGATTCAGAGTTGGTTTCTTCAATTTTAAATAATTATACCATAATATTTTTTTGATTATCACTTCTTTTTCTGATTAGATTTTTGAAGCATTTGGTCCTGTGGAACTTGTGCAACTACCTCTTGACCTTGAGTCTGGTCACTGCAAGGGTTTTGGATTTGTTCAAGTGGGTAGTTTATTTATGATCAACTTTTGCAAGCTTTTGATATGATATGCATCATAATTATCTGTACTAATTTTTGAGTCGTTTCCAGTTTGCTCATCTGGAACATGCTAAGTCAGCTCAAAGCTTGAATGGAAAATTAGAACTTGCTGGCCGAACCATCAAGGTTGTCTTCTACTAGAACCTTTAAGATTTTGATTTGTGTCTAGTACTTGTATCTGTTTGTTATTACTTATTATCACGTCTCTCGAAAATGATGACATTCTTGGTTTTGGGCATTTAAAAATAATACTGTTTGTGCAGGTTTCATCTGTAACAGATCATATTGGAGCACAAGAGAGTGTTGCTAAATCAAATGACCTTGATGATGATGAAGGGGGCGGTCTGGTTGGTGTATAATTTTCCTATATTATTAGGAAATAAATAACTATCTTGTTATAATTATTTTAGCATGTTTCTCTTCTCGGTTTTCTTATGCTAAGGCTCGAGTTGAGCTACCTTTTATTGATCGCTTAATCAATTGGACTTTTGCTTCAAATATCACCCAAGAACTTGGCTTTTACTATAGCTGATGTTTACAATAATTTAATGTGCCAGTCTGTCTCATGAATGATGATCATGTGTTTAAGTTTATTTTTCTTGATAAAATGACATAGAAAGTTGTGATTTCAATACATATCTGTGCTTTCAATTATGGCATGTGTGAGATTAGGTGAGTCTCTCTTGCCTGAGCACTCACCATGAGCGTGTGTTCATGGCAACATATGCAATTGCCTGTGGTTGGCCCCTCTTTAAATGAGTTGTGGGAGTAGTTAGGCGACCTTTATGGGATATATCAGGGTGCTGAGGCTATGTGGGGTGATTTCAACTTGGTTAGAAGTCCAAGGAGAAATTCTCAAGAGGAAACACAGCAAAAAGTATGTTATAATTTGACTTTTTTTTGATTAATGATCTCTCTTCATTTGATGTCTCAATGATAATGGAAGACATGCATGGCCAAATGAGGTTGAACCTTCTCCTTATAAAGATTGATTCTTAGCTACTGAAGATTGGATGGAGTCTTTTAGAAAATCCAGAGTTGGAGGCTACACACATTGAGTCCAGAGTTGGCAAAGTATTGAGCCTTTGAATAAGTTTGGAGTGTGTGATATAGAAATAATTGAATAGTTATAGAATTGAACAACATTCTCTAGAAGGCGCATTGGAAAATTGTAGATTCTTGTAGAATTCTTGCACATTCTTGGATTCTTCAGCGTCATGGGCTGACCTTGAAAACTAGAAAGATGGATGACTTCACATGCCAAAAAGTTGGAGAAAATTGAAACTGTTCACCTGTGAAGGAACCGATTGGGTAGCATATTGAATTGACATCCGCAAGTTGTAGATATAGCCATGATACATTGATTATTATCTTATTTTCTTGTACCTGATTACGACACATGGAAGGAATACATTGATATTGTCTGTTGATGACACACGTTGGTGTCACTAAGGGAGAATGATTCTTCCCTTGGGGTTGACCACCCCGAGTTTTTCAGACATATTGATTGCAAATTTCTGACACTTTGCTTAAGATTCTTCTTCCTCTCACATACATAGAGGAAAAAGGAGGATAAAAGAAAAGAAAATGAGACATATTGGTTGTGTCATATCATTCACTTGAGGACTGTTGAACTATGCTGGTTGCTACTTTTTCCTCTTTGATTACTACTAACTGGAATGCTTTTTGGTCACTCCTTAGCTATAGCTTTTGTATACTTCATATCATTCAATAAAATATTTGTTTATTATCAGAAAAAACGTCTGCTAATTGTATTGTCAAATTGCAGGCATTGAATGCTCAATCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCAACTAGGTTTGTCTCCCTTTGGTGTGATTAAATTGGCAGATGTGTTATCTTCCCTCTTTTCTACTGCCATCTTTTTAAATGGACTTTTGTTTCCTTAAGCAAGCGAGATCAGATCAATGTGAGTTAACTGCTGCATGGTTATTGCTTCATGGTTTCAGTATTGCAGGGTCTCTTGGAGCACCAGTGTTGAATGGGTCAGCCCCAAATCAGAGATCTTCCAGCTTGCCTCTAAATGGTCAAGCTGCAGTAGCTGCACCAGCAGTACTTCCAGCTAATTTTACTCCACCTGTTTTACAATCTGTTGGAAGCCCTAGTGAATGTCTACTACTGAAAAATATGTTTGATCCATCGACGGAGGTACTGGATACCTGTATTTCTGTTCTCATCTTTCAAGGTGGATTATTTATAAGATAAGTTATGTTGCAGACGGCACCGGACTTTGACATGGAAATCAAAGAAGACGTTGAAGAGGAGTGTTCCAAATATGGTCGCGTTAAACATATATATGTGGATAAGTGAGTACTTTCTTTTCCTTGGTCCCCATAATAAATCATATAAGCCATTTCAGGTCATATTGTCAAGTGATTTTTTTTAAAGATTTTTTTGGTTAAAATTTATATTTCTGCTTTCTTTTCAAGTCTTAGTCATACTTATGGCTATAACGTACAGGATGCTGTCTCCTGTTGACGTCTTTCTCAAATATGTTTCACTCCGTGTTGGGGCATTGACTTGGATCTTTGATCCTCATTTGCAGATACTTCCGGAATAGGGATGGAAAAAAATTACTAACTCCTTCGTGGCTCCATGGATGGGAGATTCTTGTTTTTTTTTTTTTTGGTTCCCCACTTTTATTTTAGGACGGTTACAGAAAGGAATTCCCTACCCTAACACTAGCCCTGAATTATTTTAGCAATATTATAAATTAATAACTATACTTGACTGACAACCTTTTCCATTTATGTGTGCAAATTAATTATTACTTTTGGGACTCTTGCTTTCTGCTGCCCCCGGGTGATCTTTGGGCCCCTTTTTAGTAATTTACCTCTTGTTCTTTCGTTATTCTGAAATCTGTATTAAAAGCAATTTCTGAATCTATGATAAGGATAATGACGATAGTAAACCTTACATGTCTCGTTTAATCTCTAATTACACAAAACCGTTGGAAGGTTTTCAACATCCAATGAGCATAGCCAAAACCATAGTGCCATTTCATTTTCCTATTTTCTTATAGGTAAGGGTAATGTTAACTCCACCTTATATCCGAGGATGAAACTTCAAAATTTGCATTATTATTATGTGATTCAATAGATGTTTATTTATGTAGAATTTGCCACTTTCTTCATCGTTTTCCAATTACTTTGCTCTGTGCAGAAATAGCGCAGGATGTGTGTATCTGCAATATGATGCTGTGGAAGCTGCTATAAATGCTCAACGTGCAATGCACCTGAGATGGTTTGCAGGCAGACAGATATCAGTCTTGTTCATGGTCTGTTATTTAACTTTTTATCCCTTTAGAAAGTCTTAACATTTCTCAGTTTCGACTTCTTCTCAATGTCATCTTGGTGTGTGTTGCAGCAATCGCAGGTATATGAAGCAAAGTTTAAAGGAGCTTGAGTAGTACCGTTCGTGGCTCTCACCATTGAGTAGCAATCAGAAGATTTCTGTAGCCATCCCTGCTTTGTCTCCCTCTTATGTGTAACAGGTGCTTATAGAAGTAGAGGTAAAAAGAGAGTCAAATATGTTACTAGCAAGAGTAAATGGTGTTCTTTGTGGTGGATGTTGGTTACCTATTTGTAGTTTCTGCGCTATAACATCAGTACCAGGCTCTTGGTGTCAACTTATGGAGCTGCTTTATTTTTAAAGATATTAGCATTCACACTTTGTAGATCAATGGGTTGCTTTCATTTCTCTTATAAGAATTTGATTTTCCTCCATTTACATTGCTGATGATAATAATATCCAGGTTTTCC

mRNA sequence

CAATTCTTAAGTGAACGCTAATTTTCAATTATAGAATCTGATCTGTTCCCATCCGTATAAAAAACCCCCTTAAGTCTTTCACTCGCGGCCGGATTATTGACAACTCCAAGCCAACCAATCGTTCTTCTCCTGGAAACCCCTTAAAAAACCCTAGAATTTTCAATTTTATCGAAATTTCGACCCTCCTGGCTCAGCTGATTCTGTTCCAATCCAAGTTCCGGCGAGATCTCAAGGTTCCATTTCGCGGGTCTTCAATCGGGCCGGTGAATTTCCGAAGATTCGATGGACTTCGACGAGTATGATTACTTGGAGAAAGCTGTGGAGGACCAGGACAATAGGGACTCCAAGAAGGCGAAGAAGAATGAGAGTGAGAGGAATGAGAAAAGCAGCAGAAAGAGAGAGGTAGACGAGGAAGATGGTTCCGGTGGCCGCGAGGATGAGGAGGTGAAGGTCAAGAGGTCGAGAAGCGAGCATGAAAATGGGAAGGAGGACAGGGATCAGTCGGGCCGAGGGAGGGATCGGCATCGGAGAGATAGAGAGGAAGAAACAGATGCGGGAAAAGAGAGGAACCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAGAGGGATAGAGACAGGAACAGAGAGGATAGAGATAGAGAGAGACACAAGGAGAAGGAGAGGGAGAGAGACAGGGACAGAAGGGATAAGGATAGAGATAGAGAGAGACACAAGGAGAAGGAGAGGGAGAGAGACAAGGATAGAAGGGACAAGGAGAGGGACAAGGATAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGAGAGAGAAAGGAGAGATAGGGAGAGGAGGGAGCGGGAAAGAGAAGAGGAGAGATCGCGGCGAAGCAGGAGTCGGTCTGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAGAACAGGAGAATGAAGGAAAAGAAAGACATGGTGGAGCCTGAAGCTGATCCAGAGAGGGATCAAAGAACTGTATTTGCTTATCAGATGCCTTTGAAGGCCACTGAGAGAGATGTTTACGAATTCTTTTCAAAAGCAGGAAAGGTGAGAGATGTACGGCTGATTATGGACAGGAATTCTAGACGGTCAAAAGGAGTTGGGTATGTTGAATTTTATGATGCAATGTCTGTGCCCATGGCTATCGCCCTCTCTGGTCAACTACTTCTTGGCCAACCTGTTATGGTTAAACCTTCAGAGGCTGAAAAGAATCTTGTTCAATCAAATACGTCAGGCGCCTCTGGTGCAGGGCCATATGGTGCAGTAGACAGGAAACTTTATGTTGGAAATTTACATTTCAACATGACTGAGACTCACCTTAGAGAGATTTTTGAAGCATTTGGTCCTGTGGAACTTGTGCAACTACCTCTTGACCTTGAGTCTGGTCACTGCAAGGGTTTTGGATTTGTTCAATTTGCTCATCTGGAACATGCTAAGTCAGCTCAAAGCTTGAATGGAAAATTAGAACTTGCTGGCCGAACCATCAAGGTTTCATCTGTAACAGATCATATTGGAGCACAAGAGAGTGTTGCTAAATCAAATGACCTTGATGATGATGAAGGGGGCGGTCTGGTTGGTGCATTGAATGCTCAATCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCAACTAGTATTGCAGGGTCTCTTGGAGCACCAGTGTTGAATGGGTCAGCCCCAAATCAGAGATCTTCCAGCTTGCCTCTAAATGGTCAAGCTGCAGTAGCTGCACCAGCAGTACTTCCAGCTAATTTTACTCCACCTGTTTTACAATCTGTTGGAAGCCCTAGTGAATGTCTACTACTGAAAAATATGTTTGATCCATCGACGGAGACGGCACCGGACTTTGACATGGAAATCAAAGAAGACGTTGAAGAGGAGTGTTCCAAATATGGTCGCGTTAAACATATATATGTGGATAAAAATAGCGCAGGATGTGTGTATCTGCAATATGATGCTGTGGAAGCTGCTATAAATGCTCAACGTGCAATGCACCTGAGATGGTTTGCAGGCAGACAGATATCAGTCTTGTTCATGCAATCGCAGGTATATGAAGCAAAGTTTAAAGGAGCTTGAGTAGTACCGTTCGTGGCTCTCACCATTGAGTAGCAATCAGAAGATTTCTGTAGCCATCCCTGCTTTGTCTCCCTCTTATGTGTAACAGGTGCTTATAGAAGTAGAGGTAAAAAGAGAGTCAAATATGTTACTAGCAAGAGTAAATGGTGTTCTTTGTGGTGGATGTTGGTTACCTATTTGTAGTTTCTGCGCTATAACATCAGTACCAGGCTCTTGGTGTCAACTTATGGAGCTGCTTTATTTTTAAAGATATTAGCATTCACACTTTGTAGATCAATGGGTTGCTTTCATTTCTCTTATAAGAATTTGATTTTCCTCCATTTACATTGCTGATGATAATAATATCCAGGTTTTCC

Coding sequence (CDS)

ATGGACTTCGACGAGTATGATTACTTGGAGAAAGCTGTGGAGGACCAGGACAATAGGGACTCCAAGAAGGCGAAGAAGAATGAGAGTGAGAGGAATGAGAAAAGCAGCAGAAAGAGAGAGGTAGACGAGGAAGATGGTTCCGGTGGCCGCGAGGATGAGGAGGTGAAGGTCAAGAGGTCGAGAAGCGAGCATGAAAATGGGAAGGAGGACAGGGATCAGTCGGGCCGAGGGAGGGATCGGCATCGGAGAGATAGAGAGGAAGAAACAGATGCGGGAAAAGAGAGGAACCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAGAGGGATAGAGACAGGAACAGAGAGGATAGAGATAGAGAGAGACACAAGGAGAAGGAGAGGGAGAGAGACAGGGACAGAAGGGATAAGGATAGAGATAGAGAGAGACACAAGGAGAAGGAGAGGGAGAGAGACAAGGATAGAAGGGACAAGGAGAGGGACAAGGATAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGAGAGAGAAAGGAGAGATAGGGAGAGGAGGGAGCGGGAAAGAGAAGAGGAGAGATCGCGGCGAAGCAGGAGTCGGTCTGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAGAACAGGAGAATGAAGGAAAAGAAAGACATGGTGGAGCCTGAAGCTGATCCAGAGAGGGATCAAAGAACTGTATTTGCTTATCAGATGCCTTTGAAGGCCACTGAGAGAGATGTTTACGAATTCTTTTCAAAAGCAGGAAAGGTGAGAGATGTACGGCTGATTATGGACAGGAATTCTAGACGGTCAAAAGGAGTTGGGTATGTTGAATTTTATGATGCAATGTCTGTGCCCATGGCTATCGCCCTCTCTGGTCAACTACTTCTTGGCCAACCTGTTATGGTTAAACCTTCAGAGGCTGAAAAGAATCTTGTTCAATCAAATACGTCAGGCGCCTCTGGTGCAGGGCCATATGGTGCAGTAGACAGGAAACTTTATGTTGGAAATTTACATTTCAACATGACTGAGACTCACCTTAGAGAGATTTTTGAAGCATTTGGTCCTGTGGAACTTGTGCAACTACCTCTTGACCTTGAGTCTGGTCACTGCAAGGGTTTTGGATTTGTTCAATTTGCTCATCTGGAACATGCTAAGTCAGCTCAAAGCTTGAATGGAAAATTAGAACTTGCTGGCCGAACCATCAAGGTTTCATCTGTAACAGATCATATTGGAGCACAAGAGAGTGTTGCTAAATCAAATGACCTTGATGATGATGAAGGGGGCGGTCTGGTTGGTGCATTGAATGCTCAATCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCAACTAGTATTGCAGGGTCTCTTGGAGCACCAGTGTTGAATGGGTCAGCCCCAAATCAGAGATCTTCCAGCTTGCCTCTAAATGGTCAAGCTGCAGTAGCTGCACCAGCAGTACTTCCAGCTAATTTTACTCCACCTGTTTTACAATCTGTTGGAAGCCCTAGTGAATGTCTACTACTGAAAAATATGTTTGATCCATCGACGGAGACGGCACCGGACTTTGACATGGAAATCAAAGAAGACGTTGAAGAGGAGTGTTCCAAATATGGTCGCGTTAAACATATATATGTGGATAAAAATAGCGCAGGATGTGTGTATCTGCAATATGATGCTGTGGAAGCTGCTATAAATGCTCAACGTGCAATGCACCTGAGATGGTTTGCAGGCAGACAGATATCAGTCTTGTTCATGCAATCGCAGGTATATGAAGCAAAGTTTAAAGGAGCTTGA

Protein sequence

MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRSRSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERRDRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSSLPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEAKFKGA

Homology

[Close]

BLAST of MC01g0733 vs. ExPASy Swiss-Prot
Match: Q5RC80 (RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.5e-56
Identity = 212/528 (40.15%), Postives = 285/528 (53.98%), Query Frame = 0


Query: 105 EKERDRDRNREDRDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKE 164
           E +       E+R ++R K K R R  +R+       R K KER+R    RD+ER K K 
Sbjct: 19  ENKLSSANGHEERSKKRKKSKSRSRSHERK-------RSKSKERKRS---RDRERKKSKS 78

Query: 165 KEKEKEKEKEKERER-RDRERREREREEE-----------RSRRSRSRSV-----RERER 224
           +E+++ + KE+ R R R R+RR R R              R +     S+     R R +
Sbjct: 79  RERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSK 138

Query: 225 EVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLI 284
               ++   ++E  D + PE   ERD RTVF  Q+  +   RD+ EFFS  GKVRDVR+I
Sbjct: 139 SPFRKDKSPVREPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMI 198

Query: 285 MDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSGAS 344
            DRNSRRSKG+ YVEF D  SVP+AI L+GQ +LG P++V+ S+AEKN     +N     
Sbjct: 199 SDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKG 258

Query: 345 GAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAH 404
            AGP      +LYVG+LHFN+TE  LR IFE FG +E +QL +D E+G  KG+GF+ F+ 
Sbjct: 259 SAGP-----MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD 318

Query: 405 LEHAKSA-QSLNGKLELAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLVGALNAQSR 464
            E AK A + LNG  ELAGR +KV  VT+   A  +   S+ LD DE       L    R
Sbjct: 319 SECAKKALEQLNG-FELAGRPMKVGHVTERTDASSA---SSFLDSDELERTGIDLGTTGR 378

Query: 465 ALLMQKL-DRTGI--------ATSIAGSLGAPVLNGSAPNQRSSSLPLNGQAAVAAPAVL 524
             LM +L + TG+        A  ++GSL        A  Q   S      A  AA +V 
Sbjct: 379 LQLMARLAEGTGLQIPPAAQQALQMSGSL---AFGAVADLQTRLSQQTEASALAAAASVQ 438

Query: 525 PANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDK 584
           P              ++C  L NMF+P TE    +D EIK+DV EEC+K+G V HIYVDK
Sbjct: 439 PL------------ATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 498

Query: 585 NSA-GCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEAKF 603
           NSA G VY++  ++ AAI A  A+H RWFAG+ I+  ++    Y   F
Sbjct: 499 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 509

[Close]

BLAST of MC01g0733 vs. ExPASy Swiss-Prot
Match: Q8VH51 (RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2)

HSP 1 Score: 216.9 bits (551), Expect = 6.5e-55
Identity = 211/531 (39.74%), Postives = 286/531 (53.86%), Query Frame = 0


Query: 105 EKERDRDRNREDRDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKE 164
           E + +     E+R ++R K K R R  +R+       R K KER+R    RD+ER K K 
Sbjct: 19  ENKLNSANGHEERSKKRKKSKSRSRSHERK-------RSKSKERKRS---RDRERKKSKS 78

Query: 165 KEKEKEKEKEKERER-RDRERREREREEE-----------RSRRSRSRSV-----RERER 224
           +E+++ + KE+ R R R R+RR R R              R +     S+     R R +
Sbjct: 79  RERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSK 138

Query: 225 EVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLI 284
               ++   ++E  D + PE   ERD RTVF  Q+  +   RD+ EFFS  GKVRDVR+I
Sbjct: 139 SPFRKDKSPVREPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMI 198

Query: 285 MDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSGAS 344
            DRNSRRSKG+ YVEF D  SVP+AI L+GQ +LG P++V+ S+AEKN     +N     
Sbjct: 199 SDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKG 258

Query: 345 GAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAH 404
            AGP      +LYVG+LHFN+TE  LR IFE FG +E +QL +D E+G  KG+GF+ F+ 
Sbjct: 259 SAGP-----MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD 318

Query: 405 LEHAKSA-QSLNGKLELAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLVGALNAQSR 464
            E AK A + LNG  ELAGR +KV  VT+   A  +   S+ LD DE       L    R
Sbjct: 319 SECAKKALEQLNG-FELAGRPMKVGHVTERTDASSA---SSFLDSDELERTGIDLGTTGR 378

Query: 465 ALLMQKL-DRTGI--------ATSIAGSL---GAPVLNGSAPNQRSSSLPLNGQAAVAAP 524
             LM +L + TG+        A  ++GSL        +     Q   S      A  AA 
Sbjct: 379 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAA 438

Query: 525 AVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIY 584
           +V P              ++C  L NMF+P TE    +D EIK+DV EEC+K+G V HIY
Sbjct: 439 SVQPL------------ATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIY 498

Query: 585 VDKNSA-GCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEAKF 603
           VDKNSA G VY++  ++ AAI A  A+H RWFAG+ I+  ++    Y   F
Sbjct: 499 VDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515

[Close]

BLAST of MC01g0733 vs. ExPASy Swiss-Prot
Match: Q14498 (RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 8.5e-55
Identity = 211/531 (39.74%), Postives = 285/531 (53.67%), Query Frame = 0


Query: 105 EKERDRDRNREDRDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKE 164
           E +       E+R ++R K K R R  +R+       R K KER+R    RD+ER K K 
Sbjct: 19  ENKLSSANGHEERSKKRKKSKSRSRSHERK-------RSKSKERKRS---RDRERKKSKS 78

Query: 165 KEKEKEKEKEKERER-RDRERREREREEE-----------RSRRSRSRSV-----RERER 224
           +E+++ + KE+ R R R R+RR R R              R +     S+     R R +
Sbjct: 79  RERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSK 138

Query: 225 EVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLI 284
               ++   ++E  D + PE   ERD RTVF  Q+  +   RD+ EFFS  GKVRDVR+I
Sbjct: 139 SPFRKDKSPVREPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMI 198

Query: 285 MDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSGAS 344
            DRNSRRSKG+ YVEF D  SVP+AI L+GQ +LG P++V+ S+AEKN     +N     
Sbjct: 199 SDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKG 258

Query: 345 GAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAH 404
            AGP      +LYVG+LHFN+TE  LR IFE FG +E +QL +D E+G  KG+GF+ F+ 
Sbjct: 259 SAGP-----MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD 318

Query: 405 LEHAKSA-QSLNGKLELAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLVGALNAQSR 464
            E AK A + LNG  ELAGR +KV  VT+   A  +   S+ LD DE       L    R
Sbjct: 319 SECAKKALEQLNG-FELAGRPMKVGHVTERTDASSA---SSFLDSDELERTGIDLGTTGR 378

Query: 465 ALLMQKL-DRTGI--------ATSIAGSL---GAPVLNGSAPNQRSSSLPLNGQAAVAAP 524
             LM +L + TG+        A  ++GSL        +     Q   S      A  AA 
Sbjct: 379 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAA 438

Query: 525 AVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIY 584
           +V P              ++C  L NMF+P TE    +D EIK+DV EEC+K+G V HIY
Sbjct: 439 SVQPL------------ATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIY 498

Query: 585 VDKNSA-GCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEAKF 603
           VDKNSA G VY++  ++ AAI A  A+H RWFAG+ I+  ++    Y   F
Sbjct: 499 VDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515

[Close]

BLAST of MC01g0733 vs. ExPASy Swiss-Prot
Match: O13845 (RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rsd1 PE=1 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 2.3e-36
Identity = 155/481 (32.22%), Postives = 241/481 (50.10%), Query Frame = 0


Query: 137 DRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERRDRERREREREEERSRR 196
           D  + R   + R+RD+  R         + + +  +  +      R  R R R EERS  
Sbjct: 138 DSHQSRSPVRSRDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRRRYEERS-- 197

Query: 197 SRSRSVREREREVDVRENRRMKEKK-------DMVEPEADPERDQRTVFAYQMPLKATER 256
           SRS    + + E D+R++ R  E+K       +     ++ ERD+RTVF  Q+  + T R
Sbjct: 198 SRSSRAHDYDYE-DLRDDDRSHERKRSRSRPRERSSKLSEEERDRRTVFVSQLANRLTSR 257

Query: 257 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKP 316
           ++Y+FF +AG VRD +++ D+ S RSKGV YVEF    SV  AIALSG+ LLG PV+V+ 
Sbjct: 258 ELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAIALSGKRLLGLPVIVQL 317

Query: 317 SEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLD 376
           +EAEKN      +  + A        +L V N+HFN+T+  ++ IFE FG +E V L  D
Sbjct: 318 TEAEKNRKAREAAELARAASAEIPFHRLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRD 377

Query: 377 LESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQESVAKSNDLDD 436
            +    KGFG++Q+ +   A++A       +LAGR ++V    D    + + +     D+
Sbjct: 378 -DQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRVCLGNDKFTTETTSSMLKRFDE 437

Query: 437 DEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVL---NGSAPNQRSSSL-PLNG 496
                    L  Q R+   Q+   +    S      AP+      S P  R   +  L  
Sbjct: 438 --------TLARQERSQPSQRNGGSSTYESQDYREAAPLSPTEEESRPITRDELMKKLAR 497

Query: 497 QAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEEC-SK 556
              ++  + L +   PP+       S C LL+NMF+P+ ET+P++  E+++DV+EEC  K
Sbjct: 498 SEDISDNSKLVSEPEPPI------RSRCALLENMFNPAEETSPNWVQELEQDVKEECDEK 557

Query: 557 YGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEAKFKG 606
           YG+V HI V  N  G ++++++  + A  A   +H RWF GR I    +    Y  KF  
Sbjct: 558 YGKVVHIAVVPNELGQIFVKFENADFAEKAITGLHQRWFGGRTIKASILPETDYYFKFPN 600

[Close]

BLAST of MC01g0733 vs. ExPASy Swiss-Prot
Match: Q86U06 (Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.0e-28
Identity = 161/467 (34.48%), Postives = 233/467 (49.89%), Query Frame = 0


Query: 68  KEDRDQSGR---GRDRHRRDREEETDAGKERNRTRERG-SSEKERDRDRNREDRDRERHK 127
           K++ D+  R    +D         +++G E + +   G +S+K+R R  N   + R+R +
Sbjct: 19  KKEEDEQQRKEVKKDYPSNTTSSTSNSGNETSGSSTIGETSKKKRSRSHN---KSRDRKR 78

Query: 128 EKERERDRDRRDKDRDRERHKE-KERERDKDRRDKERDKDKEKEKEKEKEKEKERERRDR 187
            + R+RDR RR   R R   ++ + R R  DRR                      E R R
Sbjct: 79  SRSRDRDRYRRRNSRSRSPGRQCRHRSRSWDRRHGS-------------------ESRSR 138

Query: 188 ERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM 247
           + R  +R   RS    +       +    RE   ++E  D + PE   ERD RTVF  Q+
Sbjct: 139 DHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPVDNLSPE---ERDARTVFCMQL 198

Query: 248 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 307
             +   RD+ +FFS  GKVRDVR+I DRNSRRSKG+ YVEF +  SVP+AI L+GQ LLG
Sbjct: 199 AARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLG 258

Query: 308 QPVMVKPSEAEKN--LVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 367
            P++V+ S+AEKN     +N       GP      +LYVG+LHFN+TE  LR IFE FG 
Sbjct: 259 VPIIVQASQAEKNRLAAMANNLQKGNGGP-----MRLYVGSLHFNITEDMLRGIFEPFGK 318

Query: 368 VELVQLPLDLESGHCKGFGFVQFAHLEHAKSA-QSLNGKLELAGRTIKVSSVTDHI-GAQ 427
           ++ + L  D ++G  KG+GF+ F+  E A+ A + LNG  ELAGR ++V  VT+ + G  
Sbjct: 319 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTERLDGGT 378

Query: 428 ESVAKSNDLDDDEGGGLVGALNAQSRALLMQKL-DRTGIATSIAGSLGAPVLNGSAPNQR 487
           +      D + D G       +A  R  LM KL +  GI      +  A     +A  Q 
Sbjct: 379 DITFPDGDQELDLG-------SAGGRFQLMAKLAEGAGIQLPSTAAAAAAAAAQAAALQL 438

Query: 488 SSSLPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPST 525
           + ++PL      A  A+ PA         +   S+C  L ++F P T
Sbjct: 439 NGAVPLGALNPAALTALSPA---------LNLASQCFQLSSLFTPQT 438

[Close]

BLAST of MC01g0733 vs. NCBI nr
Match: XP_022133415.1 (RNA-binding protein 39 isoform X1 [Momordica charantia])

HSP 1 Score: 1054 bits (2725), Expect = 0.0
Identity = 605/605 (100.00%), Postives = 605/605 (100.00%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE 120
           RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE
Sbjct: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE 120

Query: 121 RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR 180
           RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR
Sbjct: 121 RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR 180

Query: 181 DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY 240
           DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY
Sbjct: 181 DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY 240

Query: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300
           QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL
Sbjct: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300

Query: 301 LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360
           LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP
Sbjct: 301 LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360

Query: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES 420
           VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES
Sbjct: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES 420

Query: 421 VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS 480
           VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS
Sbjct: 421 VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS 480

Query: 481 LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE 540
           LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE
Sbjct: 481 LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE 540

Query: 541 ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA 600
           ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA
Sbjct: 541 ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA 600

Query: 601 KFKGA 605
           KFKGA
Sbjct: 601 KFKGA 605

[Close]

BLAST of MC01g0733 vs. NCBI nr
Match: XP_022133416.1 (RNA-binding protein 39 isoform X2 [Momordica charantia])

HSP 1 Score: 1045 bits (2703), Expect = 0.0
Identity = 603/605 (99.67%), Postives = 603/605 (99.67%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE 120
           RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE
Sbjct: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE 120

Query: 121 RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR 180
           RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR
Sbjct: 121 RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR 180

Query: 181 DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY 240
           DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY
Sbjct: 181 DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY 240

Query: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300
           QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL
Sbjct: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300

Query: 301 LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360
           LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP
Sbjct: 301 LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360

Query: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES 420
           VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES
Sbjct: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES 420

Query: 421 VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS 480
           VAKSNDLDDDEGGGL  ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS
Sbjct: 421 VAKSNDLDDDEGGGL--ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS 480

Query: 481 LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE 540
           LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE
Sbjct: 481 LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE 540

Query: 541 ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA 600
           ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA
Sbjct: 541 ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA 600

Query: 601 KFKGA 605
           KFKGA
Sbjct: 601 KFKGA 603

[Close]

BLAST of MC01g0733 vs. NCBI nr
Match: XP_008440991.1 (PREDICTED: RNA-binding protein 39 isoform X2 [Cucumis melo])

HSP 1 Score: 976 bits (2523), Expect = 0.0
Identity = 564/609 (92.61%), Postives = 585/609 (96.06%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVE+QD+R++KK K++ESERNEKS+RKREVDEE GSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKER----NRTRERGSSEKERDRDRNRED 120
           RSEHENGKEDRD SGR RDRHRRDREEETD GKER    NRTRERGSSEKERDRDR+RE+
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKE 180
           RDR+RHKEKERERD+DR+DK+RDRERHKEK+RERDKDRRDKE        KE+E+EKEKE
Sbjct: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKE--------KEREREKEKE 180

Query: 181 RERRDRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRT 240
           RERRDRERREREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRT
Sbjct: 181 RERRDRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRT 240

Query: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300
           VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS
Sbjct: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300

Query: 301 GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360
           GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE
Sbjct: 301 GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360

Query: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIG 420
           AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAK+AQSLNGKLE+AGRTIKVSSVTDHIG
Sbjct: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIG 420

Query: 421 AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480
           AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ
Sbjct: 421 AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480

Query: 481 RSSSLPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540
           RS+SLPLNGQAAVAAP VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE
Sbjct: 481 RSTSLPLNGQAAVAAP-VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540

Query: 541 DVEEECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQ 600
           DVEEECSKYG VKHIYVDKNSAGCVYLQYD VEAA+NAQRAMHLRWFAGRQISVLFMQ Q
Sbjct: 541 DVEEECSKYGHVKHIYVDKNSAGCVYLQYDTVEAAVNAQRAMHLRWFAGRQISVLFMQPQ 600

Query: 601 VYEAKFKGA 605
           VYEAKF GA
Sbjct: 601 VYEAKFIGA 600

[Close]

BLAST of MC01g0733 vs. NCBI nr
Match: XP_011657782.1 (RNA-binding protein 39 isoform X1 [Cucumis sativus])

HSP 1 Score: 975 bits (2520), Expect = 0.0
Identity = 563/609 (92.45%), Postives = 586/609 (96.22%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVE+QD+R++KK K+++SERNEKS+RKREVDEE GSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKER----NRTRERGSSEKERDRDRNRED 120
           RSEHENGKEDRD SGR RDRHRRDREEETD GKER    NRTRERGSSEKER+RDR+RE+
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120

Query: 121 RDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKE 180
           RDR+RHKEKERERD+DR+DK+RDRERHKEK+RERDKDRRDKER        E+EKEKEKE
Sbjct: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKER--------EREKEKEKE 180

Query: 181 RERRDRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRT 240
           RERRDRERREREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRT
Sbjct: 181 RERRDRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRT 240

Query: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300
           VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS
Sbjct: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300

Query: 301 GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360
           GQLLLGQPVMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE
Sbjct: 301 GQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360

Query: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIG 420
           AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAK+AQSLNGKLE+AGRTIKVSSVTDHIG
Sbjct: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIG 420

Query: 421 AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480
           AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ
Sbjct: 421 AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480

Query: 481 RSSSLPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540
           RS+SLP+NGQAAVAAP VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE
Sbjct: 481 RSTSLPVNGQAAVAAP-VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540

Query: 541 DVEEECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQ 600
           DVEEECSKYGRVKHIYVDKNSAGCVYLQYD VEAAINAQRAMHLRWFAGRQISVLFMQ Q
Sbjct: 541 DVEEECSKYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQ 600

Query: 601 VYEAKFKGA 605
           VYEAKF GA
Sbjct: 601 VYEAKFIGA 600

[Close]

BLAST of MC01g0733 vs. NCBI nr
Match: XP_038881757.1 (RNA-binding protein 39 isoform X2 [Benincasa hispida])

HSP 1 Score: 972 bits (2514), Expect = 0.0
Identity = 564/609 (92.61%), Postives = 583/609 (95.73%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVE+QD+R++KK KK+ESERNEKSSRKREVDEE GSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKKSESERNEKSSRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKER----NRTRERGSSEKERDRDRNRED 120
           RSEHENGKED+D SGRGRDRHRRDREEE D GKER    NRTRERGSSEKERDRDR+RE+
Sbjct: 61  RSEHENGKEDKDHSGRGRDRHRRDREEEADGGKERDRERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKE 180
           RDR+RHKEKERERD+DRRDKDRDRERHKEK+RERDKDRRD++R          E+EKEKE
Sbjct: 121 RDRDRHKEKERERDKDRRDKDRDRERHKEKDRERDKDRRDRDR----------EREKEKE 180

Query: 181 RERRDRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRT 240
           RERR+RE+REREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRT
Sbjct: 181 RERREREKREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRT 240

Query: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300
           VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS
Sbjct: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300

Query: 301 GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360
           GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE
Sbjct: 301 GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360

Query: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIG 420
           AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAK+AQSLNGKLE+AGRTIKVSSVTDHIG
Sbjct: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIG 420

Query: 421 AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480
           AQESVAKSNDLDDDEGGGL  ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ
Sbjct: 421 AQESVAKSNDLDDDEGGGL--ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480

Query: 481 RSSSLPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540
           RS+SLPLNGQ AVAAP VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE
Sbjct: 481 RSTSLPLNGQVAVAAP-VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540

Query: 541 DVEEECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQ 600
           DVEEECSKYGRVKHIYVDKNSAGCVYLQYD VEAAINAQRAMHLRWFAGRQISVLFMQ Q
Sbjct: 541 DVEEECSKYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQ 596

Query: 601 VYEAKFKGA 605
           VYEAKF GA
Sbjct: 601 VYEAKFIGA 596

[Close]

BLAST of MC01g0733 vs. ExPASy TrEMBL
Match: A0A6J1BV68 (RNA-binding protein 39 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005988 PE=4 SV=1)

HSP 1 Score: 1054 bits (2725), Expect = 0.0
Identity = 605/605 (100.00%), Postives = 605/605 (100.00%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE 120
           RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE
Sbjct: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE 120

Query: 121 RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR 180
           RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR
Sbjct: 121 RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR 180

Query: 181 DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY 240
           DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY
Sbjct: 181 DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY 240

Query: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300
           QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL
Sbjct: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300

Query: 301 LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360
           LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP
Sbjct: 301 LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360

Query: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES 420
           VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES
Sbjct: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES 420

Query: 421 VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS 480
           VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS
Sbjct: 421 VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS 480

Query: 481 LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE 540
           LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE
Sbjct: 481 LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE 540

Query: 541 ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA 600
           ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA
Sbjct: 541 ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA 600

Query: 601 KFKGA 605
           KFKGA
Sbjct: 601 KFKGA 605

[Close]

BLAST of MC01g0733 vs. ExPASy TrEMBL
Match: A0A6J1BV17 (RNA-binding protein 39 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005988 PE=4 SV=1)

HSP 1 Score: 1045 bits (2703), Expect = 0.0
Identity = 603/605 (99.67%), Postives = 603/605 (99.67%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE 120
           RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE
Sbjct: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE 120

Query: 121 RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR 180
           RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR
Sbjct: 121 RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR 180

Query: 181 DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY 240
           DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY
Sbjct: 181 DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY 240

Query: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300
           QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL
Sbjct: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300

Query: 301 LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360
           LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP
Sbjct: 301 LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360

Query: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES 420
           VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES
Sbjct: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIGAQES 420

Query: 421 VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS 480
           VAKSNDLDDDEGGGL  ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS
Sbjct: 421 VAKSNDLDDDEGGGL--ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSSS 480

Query: 481 LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE 540
           LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE
Sbjct: 481 LPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEE 540

Query: 541 ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA 600
           ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA
Sbjct: 541 ECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEA 600

Query: 601 KFKGA 605
           KFKGA
Sbjct: 601 KFKGA 603

[Close]

BLAST of MC01g0733 vs. ExPASy TrEMBL
Match: A0A1S3B1Y4 (RNA-binding protein 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 SV=1)

HSP 1 Score: 976 bits (2523), Expect = 0.0
Identity = 564/609 (92.61%), Postives = 585/609 (96.06%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVE+QD+R++KK K++ESERNEKS+RKREVDEE GSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKER----NRTRERGSSEKERDRDRNRED 120
           RSEHENGKEDRD SGR RDRHRRDREEETD GKER    NRTRERGSSEKERDRDR+RE+
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKE 180
           RDR+RHKEKERERD+DR+DK+RDRERHKEK+RERDKDRRDKE        KE+E+EKEKE
Sbjct: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKE--------KEREREKEKE 180

Query: 181 RERRDRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRT 240
           RERRDRERREREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRT
Sbjct: 181 RERRDRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRT 240

Query: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300
           VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS
Sbjct: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300

Query: 301 GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360
           GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE
Sbjct: 301 GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360

Query: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIG 420
           AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAK+AQSLNGKLE+AGRTIKVSSVTDHIG
Sbjct: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIG 420

Query: 421 AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480
           AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ
Sbjct: 421 AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480

Query: 481 RSSSLPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540
           RS+SLPLNGQAAVAAP VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE
Sbjct: 481 RSTSLPLNGQAAVAAP-VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540

Query: 541 DVEEECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQ 600
           DVEEECSKYG VKHIYVDKNSAGCVYLQYD VEAA+NAQRAMHLRWFAGRQISVLFMQ Q
Sbjct: 541 DVEEECSKYGHVKHIYVDKNSAGCVYLQYDTVEAAVNAQRAMHLRWFAGRQISVLFMQPQ 600

Query: 601 VYEAKFKGA 605
           VYEAKF GA
Sbjct: 601 VYEAKFIGA 600

[Close]

BLAST of MC01g0733 vs. ExPASy TrEMBL
Match: A0A1S3B2E3 (RNA-binding protein 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 SV=1)

HSP 1 Score: 967 bits (2501), Expect = 0.0
Identity = 562/609 (92.28%), Postives = 583/609 (95.73%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVE+QD+R++KK K++ESERNEKS+RKREVDEE GSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKER----NRTRERGSSEKERDRDRNRED 120
           RSEHENGKEDRD SGR RDRHRRDREEETD GKER    NRTRERGSSEKERDRDR+RE+
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKE 180
           RDR+RHKEKERERD+DR+DK+RDRERHKEK+RERDKDRRDKE        KE+E+EKEKE
Sbjct: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKE--------KEREREKEKE 180

Query: 181 RERRDRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRT 240
           RERRDRERREREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRT
Sbjct: 181 RERRDRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRT 240

Query: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300
           VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS
Sbjct: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300

Query: 301 GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360
           GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE
Sbjct: 301 GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360

Query: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIG 420
           AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAK+AQSLNGKLE+AGRTIKVSSVTDHIG
Sbjct: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIG 420

Query: 421 AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480
           AQESVAKSNDLDDDEGGGL  ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ
Sbjct: 421 AQESVAKSNDLDDDEGGGL--ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480

Query: 481 RSSSLPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540
           RS+SLPLNGQAAVAAP VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE
Sbjct: 481 RSTSLPLNGQAAVAAP-VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540

Query: 541 DVEEECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQ 600
           DVEEECSKYG VKHIYVDKNSAGCVYLQYD VEAA+NAQRAMHLRWFAGRQISVLFMQ Q
Sbjct: 541 DVEEECSKYGHVKHIYVDKNSAGCVYLQYDTVEAAVNAQRAMHLRWFAGRQISVLFMQPQ 598

Query: 601 VYEAKFKGA 605
           VYEAKF GA
Sbjct: 601 VYEAKFIGA 598

[Close]

BLAST of MC01g0733 vs. ExPASy TrEMBL
Match: A0A0A0KFB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486730 PE=4 SV=1)

HSP 1 Score: 966 bits (2498), Expect = 0.0
Identity = 561/609 (92.12%), Postives = 584/609 (95.89%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVE+QD+R++KK K+++SERNEKS+RKREVDEE GSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKER----NRTRERGSSEKERDRDRNRED 120
           RSEHENGKEDRD SGR RDRHRRDREEETD GKER    NRTRERGSSEKER+RDR+RE+
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120

Query: 121 RDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKE 180
           RDR+RHKEKERERD+DR+DK+RDRERHKEK+RERDKDRRDKER        E+EKEKEKE
Sbjct: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKER--------EREKEKEKE 180

Query: 181 RERRDRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRT 240
           RERRDRERREREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRT
Sbjct: 181 RERRDRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRT 240

Query: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300
           VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS
Sbjct: 241 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALS 300

Query: 301 GQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360
           GQLLLGQPVMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE
Sbjct: 301 GQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFE 360

Query: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIG 420
           AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAK+AQSLNGKLE+AGRTIKVSSVTDHIG
Sbjct: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIG 420

Query: 421 AQESVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480
           AQESVAKSNDLDDDEGGGL  ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ
Sbjct: 421 AQESVAKSNDLDDDEGGGL--ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ 480

Query: 481 RSSSLPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540
           RS+SLP+NGQAAVAAP VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE
Sbjct: 481 RSTSLPVNGQAAVAAP-VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKE 540

Query: 541 DVEEECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQ 600
           DVEEECSKYGRVKHIYVDKNSAGCVYLQYD VEAAINAQRAMHLRWFAGRQISVLFMQ Q
Sbjct: 541 DVEEECSKYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQ 598

Query: 601 VYEAKFKGA 605
           VYEAKF GA
Sbjct: 601 VYEAKFIGA 598

[Close]

BLAST of MC01g0733 vs. TAIR 10
Match: AT5G09880.1 (Splicing factor, CC1-like )

HSP 1 Score: 538.5 bits (1386), Expect = 6.9e-153
Identity = 361/605 (59.67%), Postives = 422/605 (69.75%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           M+FDEY+YLEK VE+     +KK +++ +ER+E+S RKRE  E  G  G E+E V    S
Sbjct: 1   MEFDEYEYLEKTVEEGAG-SNKKKEESGNERSERSYRKREGGERQGEEGGEEERVS---S 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE 120
           RS+                             K R    E G  +++R+R+R+R  RD++
Sbjct: 61  RSK-----------------------------KSRGDGEENGGGKRDRERERHRSSRDKD 120

Query: 121 RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR 180
           R ++K RE     RDK+ DRER     +ERD+  RDK RD                RERR
Sbjct: 121 RERDKVRE---GSRDKESDRER---SSKERDRSDRDKPRD----------------RERR 180

Query: 181 DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY 240
           +RE+    R   RSRR       E+E EV  R +RR ++KKD  EPEADPERDQRTVFAY
Sbjct: 181 EREK----RSSSRSRR------EEKEPEVVERGSRRHRDKKD--EPEADPERDQRTVFAY 240

Query: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300
           QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQL 
Sbjct: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLF 300

Query: 301 LGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360
           LGQPVMVKPSEAEKNL QSN++   G GP    DRKLYVGNLHFNM+E  LR+IFEAFGP
Sbjct: 301 LGQPVMVKPSEAEKNLAQSNSTTVGGTGP---ADRKLYVGNLHFNMSELQLRQIFEAFGP 360

Query: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQ-SLNGKLELAGRTIKVSSVTDHIGAQE 420
           VELVQLPLD E+G CKGFGF+QF  LEH+K+AQ +LNGKLE+AGRTIKVSSV+DHIG Q+
Sbjct: 361 VELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQD 420

Query: 421 SVAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSS 480
           S  KS D DDD+GGGL  ALNAQSRA+LMQKLDR+GIATSI GSLG P LNG+A NQ   
Sbjct: 421 SAPKSADFDDDDGGGL--ALNAQSRAMLMQKLDRSGIATSIVGSLGVPGLNGAAFNQ--- 480

Query: 481 SLPLNGQAAVAAPAVLPANFTPP-VLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDV 540
                G       +VLP    P  V + VG PSECLLLKNMFDP+TET P+FD+EI++DV
Sbjct: 481 ----PGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDV 526

Query: 541 EEECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVY 600
            +ECSKYG V HIYVDKNSAG VYL++ +VEAA  AQRAMH+RWFA + IS  FM    Y
Sbjct: 541 ADECSKYGPVNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEY 526

Query: 601 EAKFK 604
           EAK K
Sbjct: 601 EAKAK 526

[Close]

BLAST of MC01g0733 vs. TAIR 10
Match: AT2G16940.1 (Splicing factor, CC1-like )

HSP 1 Score: 463.0 bits (1190), Expect = 3.7e-130
Identity = 336/618 (54.37%), Postives = 413/618 (66.83%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVKVKRS 60
           MDFDEY+YLEK VE+                         ++ E G+GG  DE+VK    
Sbjct: 1   MDFDEYEYLEKTVENP-----------------------HLENEVGNGG-GDEKVK---- 60

Query: 61  RSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNREDRDRE 120
                 GKE R +S     RHR D+++E D  ++  R++   S  + R R     DR+R+
Sbjct: 61  ----SEGKE-RSRS----SRHRGDKKKERDEDEDGRRSKRSRSHHRSRSR-----DRERD 120

Query: 121 RHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEKERERR 180
           RH+     RDRD R+KD D+E    K+RERD   RDK+RD        K ++ EK+R RR
Sbjct: 121 RHRSSREHRDRD-REKDVDKEERNGKDRERD---RDKDRD-------SKGRDHEKDRSRR 180

Query: 181 DRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKK-DMVEPEADPERDQRTVFA 240
            R R ER R +ER  +S     +ERE +   R+ RR K+KK D VEPEADPERDQRTVFA
Sbjct: 181 SRSRSERHRSQER-EKSLEIEPKERETKDRDRDRRRHKDKKEDKVEPEADPERDQRTVFA 240

Query: 241 YQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQL 300
           YQ+ L+ATERDVYEFFS+AGKVRDVR+IMDR SRRS+G+GYVEFYD MSVPMAIALSGQ 
Sbjct: 241 YQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQP 300

Query: 301 LLGQPVMVKPSEAEKNLVQSNT--SGASG-AGPYGAVDRKLYVGNLHFNMTETHLREIFE 360
           LLGQPVMVKPSEAEKNLVQS T  +GA G  GPY    R+LYVGNLH NM+E  LR++FE
Sbjct: 301 LLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFE 360

Query: 361 AFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLNGKLELAGRTIKVSSVTDHIG 420
           +FG VELVQ+P D E+G CKGFGFVQFA LE A++A +LNG+LE+AGR IKVS+VTD   
Sbjct: 361 SFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTE 420

Query: 421 AQES--VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAP 480
             E+     + DLDDD+GGGL  +LNAQSRALLMQKLDR+G A+S  G   A   NG   
Sbjct: 421 VPEAGQTQTTGDLDDDDGGGL--SLNAQSRALLMQKLDRSGTASS-TGLTTAASFNGGVS 480

Query: 481 NQRSSSLPLNGQAAVAA----------PAVLPANFTPPVLQSVGSPSECLLLKNMFDPST 540
              S + P   Q +  A          P V+PA F P     +G PSECLLLKNMFDPST
Sbjct: 481 TISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDP-----IGVPSECLLLKNMFDPST 540

Query: 541 ETAPDFDMEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFA 600
           ET  DFD +IKEDV+EECSK+G++ HI+VDKNS G VYL+++  +AAI AQRA+H RWFA
Sbjct: 541 ETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFA 555

Query: 601 GRQISVLFMQSQVYEAKF 603
           G+ I+  +M ++ YEAKF
Sbjct: 601 GKMITATYMTTEAYEAKF 555

[Close]

BLAST of MC01g0733 vs. TAIR 10
Match: AT2G16940.3 (Splicing factor, CC1-like )

HSP 1 Score: 432.6 bits (1111), Expect = 5.3e-121
Identity = 332/638 (52.04%), Postives = 416/638 (65.20%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEEDGSGGREDEEVK---V 60
           MDFDEY+YLEK VE+                         ++ E G+GG  DE+VK    
Sbjct: 1   MDFDEYEYLEKTVENP-----------------------HLENEVGNGG-GDEKVKSEGK 60

Query: 61  KRSRSEHENG--KEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDRDRNRE 120
           +RSRS    G  K++RD+   GR R +R R       ++R R R R SS + RDRDR + 
Sbjct: 61  ERSRSSRHRGDKKKERDEDEDGR-RSKRSRSHHRSRSRDRERDRHR-SSREHRDRDREK- 120

Query: 121 DRDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKEK 180
           D D+E    K+RERD   RDKDRD    K ++ E+D+ RR + R    E+ + +E+EK  
Sbjct: 121 DVDKEERNGKDRERD---RDKDRD---SKGRDHEKDRSRRSRSR---SERHRSQEREKSL 180

Query: 181 ERERRDRERREREREEERSRRSRSRSVR---EREREVDVRE----NRRMKEKKDMVEPEA 240
           E E ++RE ++R+R+           V    + +  +  R+     R   +K+D VEPEA
Sbjct: 181 EIEPKERETKDRDRDRRFILMLLGPLVLPSVQLDGALPCRDFSCFIRHKDKKEDKVEPEA 240

Query: 241 DPERDQRTVFAYQMPLKATERDVYEFFSKAGK---------VRDVRLIMDRNSRRSKGVG 300
           DPERDQRTVFAYQ+ L+ATERDVYEFFS+AGK         VRDVR+IMDR SRRS+G+G
Sbjct: 241 DPERDQRTVFAYQIALRATERDVYEFFSRAGKVCPFLCRFHVRDVRIIMDRISRRSRGIG 300

Query: 301 YVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT--SGASG-AGPYGAVDRK 360
           YVEFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS T  +GA G  GPY    R+
Sbjct: 301 YVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARR 360

Query: 361 LYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSLN 420
           LYVGNLH NM+E  LR++FE+FG VELVQ+P D E+G CKGFGFVQFA LE A++A +LN
Sbjct: 361 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLN 420

Query: 421 GKLELAGRTIKVSSVTDHIGAQES--VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDRT 480
           G+LE+AGR IKVS+VTD     E+     + DLDDD+GGGL  +LNAQSRALLMQKLDR+
Sbjct: 421 GQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGL--SLNAQSRALLMQKLDRS 480

Query: 481 GIATSIAGSLGAPVLNGSAPNQRSSSLPLNGQAAVAA----------PAVLPANFTPPVL 540
           G A+S  G   A   NG      S + P   Q +  A          P V+PA F P   
Sbjct: 481 GTASS-TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDP--- 540

Query: 541 QSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQ 600
             +G PSECLLLKNMFDPSTET  DFD +IKEDV+EECSK+G++ HI+VDKNS G VYL+
Sbjct: 541 --IGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLR 593

Query: 601 YDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEAKF 603
           ++  +AAI AQRA+H RWFAG+ I+  +M ++ YEAKF
Sbjct: 601 FENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 593

[Close]

BLAST of MC01g0733 vs. TAIR 10
Match: AT2G16940.2 (Splicing factor, CC1-like )

HSP 1 Score: 425.2 bits (1092), Expect = 8.5e-119
Identity = 326/639 (51.02%), Postives = 411/639 (64.32%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVE------DQDNRDSKKAKKNESERNEKSSR----KREVDEEDGSGGR 60
           MDFDEY+YLEK VE      +  N    +  K+E +   +SSR    K++  +ED  G R
Sbjct: 1   MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDGRR 60

Query: 61  EDEEVKVKRSRSEHENGKEDRDQSGRGRDRHRRDREEETDAGKERNRTRERGSSEKERDR 120
                  KRSRS H +   DR++      R  RDR+ E D  KE     ER   ++ERDR
Sbjct: 61  S------KRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKE-----ERNGKDRERDR 120

Query: 121 DRNREDRDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERD-KDKEKEKEK 180
           D++R+ + R      + E+DR RR + R  ERH+ +ERE+  +   KER+ KD+++++  
Sbjct: 121 DKDRDSKGR------DHEKDRSRRSRSRS-ERHRSQEREKSLEIEPKERETKDRDRDRRY 180

Query: 181 EKEKEKE-----------RERRDRERREREREEERSRRSRSRSVREREREVDVRENRRMK 240
             E   +                    +     E + R+       R+R  D        
Sbjct: 181 TSELVIDFIIYVHWYCLLYNLMGHVPFKIIIVIEGTSRASCVYAYWRKRHKD-------- 240

Query: 241 EKKDMVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 300
           +K+D VEPEADPERDQRTVFAYQ+ L+ATERDVYEFFS+AGKVRDVR+IMDR SRRS+G+
Sbjct: 241 KKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGI 300

Query: 301 GYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT--SGASG-AGPYGAVDR 360
           GYVEFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS T  +GA G  GPY    R
Sbjct: 301 GYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGAR 360

Query: 361 KLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKSAQSL 420
           +LYVGNLH NM+E  LR++FE+FG VELVQ+P D E+G CKGFGFVQFA LE A++A +L
Sbjct: 361 RLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNL 420

Query: 421 NGKLELAGRTIKVSSVTDHIGAQES--VAKSNDLDDDEGGGLVGALNAQSRALLMQKLDR 480
           NG+LE+AGR IKVS+VTD     E+     + DLDDD+GGGL  +LNAQSRALLMQKLDR
Sbjct: 421 NGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGL--SLNAQSRALLMQKLDR 480

Query: 481 TGIATSIAGSLGAPVLNGSAPNQRSSSLPLNGQAAVAA----------PAVLPANFTPPV 540
           +G A+S  G   A   NG      S + P   Q +  A          P V+PA F P  
Sbjct: 481 SGTASS-TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDP-- 540

Query: 541 LQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDKNSAGCVYL 600
              +G PSECLLLKNMFDPSTET  DFD +IKEDV+EECSK+G++ HI+VDKNS G VYL
Sbjct: 541 ---IGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYL 600

Query: 601 QYDAVEAAINAQRAMHLRWFAGRQISVLFMQSQVYEAKF 603
           +++  +AAI AQRA+H RWFAG+ I+  +M ++ YEAKF
Sbjct: 601 RFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 604

The following BLAST results are available for this feature:

BLAST of MC01g0733 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RC80	4.5e-56	40.15	RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1	[more]
Q8VH51	6.5e-55	39.74	RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2	[more]
Q14498	8.5e-55	39.74	RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2	[more]
O13845	2.3e-36	32.22	RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
Q86U06	4.0e-28	34.48	Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1	[more]

BLAST of MC01g0733 vs. NCBI nr


Match Name	Identity	Description
XP_022133415.1	100.00	RNA-binding protein 39 isoform X1 [Momordica charantia]	[more]
XP_022133416.1	99.67	RNA-binding protein 39 isoform X2 [Momordica charantia]	[more]
XP_008440991.1	92.61	PREDICTED: RNA-binding protein 39 isoform X2 [Cucumis melo]	[more]
XP_011657782.1	92.45	RNA-binding protein 39 isoform X1 [Cucumis sativus]	[more]
XP_038881757.1	92.61	RNA-binding protein 39 isoform X2 [Benincasa hispida]	[more]

BLAST of MC01g0733 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1BV68	100.00	RNA-binding protein 39 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005988...	[more]
A0A6J1BV17	99.67	RNA-binding protein 39 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005988...	[more]
A0A1S3B1Y4	92.61	RNA-binding protein 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 S...	[more]
A0A1S3B2E3	92.28	RNA-binding protein 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 S...	[more]
A0A0A0KFB3	92.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486730 PE=4 SV=1	[more]

BLAST of MC01g0733 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09880.1	6.9e-153	59.67	Splicing factor, CC1-like	[more]
AT2G16940.1	3.7e-130	54.37	Splicing factor, CC1-like	[more]
AT2G16940.3	5.3e-121	52.04	Splicing factor, CC1-like	[more]
AT2G16940.2	8.5e-119	51.02	Splicing factor, CC1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 154..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..233
None	No IPR available	PANTHER	PTHR48036	SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED	coord: 1..115
None	No IPR available	PANTHER	PTHR48036	SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED	coord: 103..604
None	No IPR available	PANTHER	PTHR48036:SF5	CC1-LIKE SPLICING FACTOR	coord: 103..604 coord: 1..115
None	No IPR available	CDD	cd12283	RRM1_RBM39_like	coord: 236..308 e-value: 4.46785E-45 score: 152.375
None	No IPR available	CDD	cd12285	RRM3_RBM39_like	coord: 511..593 e-value: 5.68169E-38 score: 133.054
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 336..409 e-value: 5.8E-24 score: 95.6 coord: 236..308 e-value: 2.6E-17 score: 73.5 coord: 513..591 e-value: 1.2E-4 score: 31.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 242..304 e-value: 3.4E-11 score: 42.8 coord: 535..588 e-value: 1.9E-4 score: 21.2 coord: 337..407 e-value: 4.2E-18 score: 64.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 335..413 score: 17.915731
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 235..312 score: 15.562085
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 228..317 e-value: 5.5E-22 score: 79.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 318..414 e-value: 1.5E-23 score: 85.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 508..605 e-value: 9.3E-32 score: 111.3
IPR029123	Splicing factor RBM39, linker	PFAM	PF15519	RBM39linker	coord: 427..529 e-value: 1.9E-20 score: 73.7
IPR006509	Splicing factor, RBM39-like	TIGRFAM	TIGR01622	TIGR01622	coord: 114..602 e-value: 2.6E-169 score: 562.3
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 335..411
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 229..326
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 509..593

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0733.1	MC01g0733.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding