MC01g0658 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g0658
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC01: 12849675 .. 12849983 (+)
RNA-Seq ExpressionMC01g0658
SyntenyMC01g0658
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGTGAGAAGGCGCGTTCAAGTGGATGAAGCAGTGGAGAAGCTGTCGCAGGTCCTGCTTCGAGTAAATCTCGTTCTCCAGAATCATCTGGACCATCGAATGCCGGAAATCCAGGTACGGATCGTCGGAGTCTTTCTCGACGGCCACGCTCTCGCCGCCGCTTCTGCCGATGCCTCGGAAGGTGAGGGAGGTTCTCGTCTCGGAGTCGGAGTCGGAGACGGAGAACGGCGGCGATTCGGAATCGGAGGAGTCGGAGAAGTGATGGTGGTTTGGGGATTTGGCCGATGGCTTTGGTTTGAGGTGGAAGAG

mRNA sequence

GTGGTGAGAAGGCGCGTTCAAGTGGATGAAGCAGTGGAGAAGCTGTCGCAGGTCCTGCTTCGAGTAAATCTCGTTCTCCAGAATCATCTGGACCATCGAATGCCGGAAATCCAGGTACGGATCGTCGGAGTCTTTCTCGACGGCCACGCTCTCGCCGCCGCTTCTGCCGATGCCTCGGAAGGTGAGGGAGGTTCTCGTCTCGGAGTCGGAGTCGGAGACGGAGAACGGCGGCGATTCGGAATCGGAGGAGTCGGAGAAGTGATGGTGGTTTGGGGATTTGGCCGATGGCTTTGGTTTGAGGTGGAAGAG

Coding sequence (CDS)

GTGGTGAGAAGGCGCGTTCAAGTGGATGAAGCAGTGGAGAAGCTGTCGCAGGTCCTGCTTCGAGTAAATCTCGTTCTCCAGAATCATCTGGACCATCGAATGCCGGAAATCCAGGTACGGATCGTCGGAGTCTTTCTCGACGGCCACGCTCTCGCCGCCGCTTCTGCCGATGCCTCGGAAGGTGAGGGAGGTTCTCGTCTCGGAGTCGGAGTCGGAGACGGAGAACGGCGGCGATTCGGAATCGGAGGAGTCGGAGAAGTGATGGTGGTTTGGGGATTTGGCCGATGGCTTTGGTTTGAGGTGGAAGAG

Protein sequence

VVRRRVQVDEAVEKLSQVLLRVNLVLQNHLDHRMPEIQVRIVGVFLDGHALAAASADASEGEGGSRLGVGVGDGERRRFGIGGVGEVMVVWGFGRWLWFEVEE
Homology
BLAST of MC01g0658 vs. NCBI nr
Match: TYK07438.1 (hypothetical protein E5676_scaffold202G001680 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 1.79e-20
Identity = 59/104 (56.73%), Postives = 69/104 (66.35%), Query Frame = 0

Query: 2   VRRRVQVDEAVEKLSQVLLRVNLVLQNHLDHRMPEIQVRIVGVFLDGHALAAASADASEG 61
           VRRR+Q+ E  +K SQ+ L VNLVLQNHL+HRM EIQVRIVG+ L    L  A A+ASE 
Sbjct: 2   VRRRIQLQETPKKPSQIFLGVNLVLQNHLNHRMSEIQVRIVGILLHRDTLPPAPAEASER 61

Query: 62  EGGSRLGVGVGDGERRRFGIGGVG-EVMV-VWGFGRWLWFEVEE 103
           +GGS LG+G        FG+GG G E MV V GF   LW EV E
Sbjct: 62  DGGSGLGLG--------FGVGGSGGEAMVMVGGFEGGLWLEVVE 97

BLAST of MC01g0658 vs. NCBI nr
Match: PON70071.1 (hypothetical protein PanWU01x14_082460 [Parasponia andersonii])

HSP 1 Score: 69.7 bits (169), Expect = 1.29e-12
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0

Query: 5   RVQVDEAVEKLSQVLLRVNLVLQNHLDHRMPEIQVRIVGVFLDGHALAAASADASEGEGG 64
           RVQ++EAVE+L++V+L VNLVLQ HL HR+PE+QVRIV + L  H ++A S +   G   
Sbjct: 41  RVQLEEAVEELAEVVLGVNLVLQYHLQHRLPEVQVRIVRLLLHRHPISADSPEPPHGGSR 100

Query: 65  SRLGVGVGDGERRRFGIGGVGEVMVV 90
            RL V VG+    R G GG G V+VV
Sbjct: 101 RRLVV-VGEYGGGRGGGGGGGSVVVV 125

BLAST of MC01g0658 vs. NCBI nr
Match: KZV48972.1 (hypothetical protein F511_09568, partial [Dorcoceras hygrometricum])

HSP 1 Score: 68.9 bits (167), Expect = 2.95e-12
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 0

Query: 1  VVRRRVQVDEAVEKLSQVLLRVNLVLQNHLDHRMPEIQVRIVGVFLDGHALAAASADASE 60
          V+ R V++ EA+EKL Q+   VNL+LQ+HL H + EI++ +VG+FL GHALAA   +A  
Sbjct: 17 VIVRGVELQEAIEKLFQIFFGVNLLLQDHLQHGVAEIEIWVVGIFLHGHALAADPTEALN 76

Query: 61 GEGGSRLGVGVGDGERRRFGIGGVG 85
          G      G GVG G  R F  GG G
Sbjct: 77 G-----FGFGVGGGGPRGFEDGGEG 96

BLAST of MC01g0658 vs. NCBI nr
Match: XP_019102017.1 (PREDICTED: uncharacterized protein LOC109133395 [Camelina sativa])

HSP 1 Score: 66.2 bits (160), Expect = 8.04e-11
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 0

Query: 1   VVRRRVQVDEAVEKLSQVLLRVNLVLQNHLDHRMPEIQVRIVGVFLDGHALAAASADASE 60
           VV R V+ ++AVEKLS+V+  VNLVL+NHL HR+ EI+VRIVGVFLDG            
Sbjct: 35  VVVRLVEGEKAVEKLSEVVFGVNLVLENHLKHRLAEIKVRIVGVFLDGDGSGGGCGGGGR 94

Query: 61  GEGGSRLGVGVGDGERRRFGIGGVG 85
           G G   +G G   G R   G+G VG
Sbjct: 95  GVG-EPVGGGWNGGGRGGRGVGRVG 118

BLAST of MC01g0658 vs. NCBI nr
Match: KAB2034827.1 (hypothetical protein ES319_D04G110800v1 [Gossypium barbadense])

HSP 1 Score: 59.3 bits (142), Expect = 4.58e-09
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 0

Query: 4  RRVQVDEAVEKLSQVLLRVNLVLQNHLDHRMPEIQVRIVGVFL 46
          RR+Q+ E VEKLSQ++ R+ L LQ HL H +PE+Q+R+VGVFL
Sbjct: 35 RRIQLQETVEKLSQIIFRIYLFLQYHLQHGVPEVQIRVVGVFL 77

BLAST of MC01g0658 vs. ExPASy TrEMBL
Match: A0A0A0KIS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454390 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.90e-24
Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 0

Query: 2   VRRRVQVDEAVEKLSQVLLRVNLVLQNHLDHRMPEIQVRIVGVFLDGHALAAASADASEG 61
           VRRR+Q+ E  +K SQ+ LRV LVLQNHL+HR+ EIQVRIV + L+ + L  A  +ASE 
Sbjct: 2   VRRRIQLQETPKKPSQIFLRVYLVLQNHLNHRVSEIQVRIVRILLNSNTLPPAPTEASER 61

Query: 62  EGGSRLGVGVGDGERRRFGIGGVGE---VMVVWGFGRWLWFEVEE 103
           + GS LGVGVG+G  R FG+GG G    +M+V GFG  LWFEV E
Sbjct: 62  DRGSGLGVGVGEG--RGFGVGGSGGEAMMMMVGGFGGGLWFEVVE 104

BLAST of MC01g0658 vs. ExPASy TrEMBL
Match: A0A5D3C8E6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001680 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 8.68e-21
Identity = 59/104 (56.73%), Postives = 69/104 (66.35%), Query Frame = 0

Query: 2   VRRRVQVDEAVEKLSQVLLRVNLVLQNHLDHRMPEIQVRIVGVFLDGHALAAASADASEG 61
           VRRR+Q+ E  +K SQ+ L VNLVLQNHL+HRM EIQVRIVG+ L    L  A A+ASE 
Sbjct: 2   VRRRIQLQETPKKPSQIFLGVNLVLQNHLNHRMSEIQVRIVGILLHRDTLPPAPAEASER 61

Query: 62  EGGSRLGVGVGDGERRRFGIGGVG-EVMV-VWGFGRWLWFEVEE 103
           +GGS LG+G        FG+GG G E MV V GF   LW EV E
Sbjct: 62  DGGSGLGLG--------FGVGGSGGEAMVMVGGFEGGLWLEVVE 97

BLAST of MC01g0658 vs. ExPASy TrEMBL
Match: A0A2P5D9V0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_082460 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.23e-13
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0

Query: 5   RVQVDEAVEKLSQVLLRVNLVLQNHLDHRMPEIQVRIVGVFLDGHALAAASADASEGEGG 64
           RVQ++EAVE+L++V+L VNLVLQ HL HR+PE+QVRIV + L  H ++A S +   G   
Sbjct: 41  RVQLEEAVEELAEVVLGVNLVLQYHLQHRLPEVQVRIVRLLLHRHPISADSPEPPHGGSR 100

Query: 65  SRLGVGVGDGERRRFGIGGVGEVMVV 90
            RL V VG+    R G GG G V+VV
Sbjct: 101 RRLVV-VGEYGGGRGGGGGGGSVVVV 125

BLAST of MC01g0658 vs. ExPASy TrEMBL
Match: A0A2Z7CPF6 (Uncharacterized protein (Fragment) OS=Dorcoceras hygrometricum OX=472368 GN=F511_09568 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.43e-12
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 0

Query: 1  VVRRRVQVDEAVEKLSQVLLRVNLVLQNHLDHRMPEIQVRIVGVFLDGHALAAASADASE 60
          V+ R V++ EA+EKL Q+   VNL+LQ+HL H + EI++ +VG+FL GHALAA   +A  
Sbjct: 17 VIVRGVELQEAIEKLFQIFFGVNLLLQDHLQHGVAEIEIWVVGIFLHGHALAADPTEALN 76

Query: 61 GEGGSRLGVGVGDGERRRFGIGGVG 85
          G      G GVG G  R F  GG G
Sbjct: 77 G-----FGFGVGGGGPRGFEDGGEG 96

BLAST of MC01g0658 vs. ExPASy TrEMBL
Match: A0A5J5RUT1 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D04G110800v1 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.22e-09
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 0

Query: 4  RRVQVDEAVEKLSQVLLRVNLVLQNHLDHRMPEIQVRIVGVFL 46
          RR+Q+ E VEKLSQ++ R+ L LQ HL H +PE+Q+R+VGVFL
Sbjct: 35 RRIQLQETVEKLSQIIFRIYLFLQYHLQHGVPEVQIRVVGVFL 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
TYK07438.11.79e-2056.73hypothetical protein E5676_scaffold202G001680 [Cucumis melo var. makuwa][more]
PON70071.11.29e-1252.33hypothetical protein PanWU01x14_082460 [Parasponia andersonii][more]
KZV48972.12.95e-1248.24hypothetical protein F511_09568, partial [Dorcoceras hygrometricum][more]
XP_019102017.18.04e-1150.59PREDICTED: uncharacterized protein LOC109133395 [Camelina sativa][more]
KAB2034827.14.58e-0960.47hypothetical protein ES319_D04G110800v1 [Gossypium barbadense][more]
Match NameE-valueIdentityDescription
A0A0A0KIS54.90e-2457.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454390 PE=4 SV=1[more]
A0A5D3C8E68.68e-2156.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A2P5D9V06.23e-1352.33Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_082460 PE... [more]
A0A2Z7CPF61.43e-1248.24Uncharacterized protein (Fragment) OS=Dorcoceras hygrometricum OX=472368 GN=F511... [more]
A0A5J5RUT12.22e-0960.47Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D04G110800v1 PE... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g0658.1MC01g0658.1mRNA