MC01g0654 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0654
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	MC01: 12824031 .. 12825319 (+)
RNA-Seq Expression	MC01g0654
Synteny	MC01g0654

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGATAATTATATTTTTGCAACAATGAATACATTACCGGCGACATTTTTATTTTTGTTTACTCTTCTTTAACCGAGCTCTTTAATTCACTGTGTGTCAACACACACAAAATTAAATGAGGTATTAAATAAAACCCACTTCCTGGGCTTATATATAATCCCCGTGCGAGCCCCCAATTCCCCTGCCCTGCACCCTGCACACCAAAAAAAAACTCTTCTTTTGATTCCTCTGTTTTCCCCTCTCCTCCATTAAATTTTCAGGTGAAGTAGAAATTCATCATCTGCCCAATAATTCTCGATTCGATTTCGATAATCAAATTTCAATTTTGTTGGTTTTTGCAGAAGAAGATCAAGATGAATCGGAGAACCAACGGACCCAAGCTGGAGCTGAAACTGAACCTGTCGCCCCCGCGGGCCAGGGGCGGAGTGGAATCGCCGAGCCGGGCCGCCACCGTGTCGCCGACGTCGTCGCCGCCGAGCTCGTGCGTGTCGTCGGAGGAGGGCGCGGCGGCGAGATACTCGAACAGCCCGGAGGCGACGTCGATGATGCTTGTGGGCTGCCCGCGGTGCCTGATGTACGTTATGCTGGCGGAGGAGGACCCCAAATGCCCCAAATGTAAGAGCACCGTCCTTCTCGACGTCCTCCACGACAACGCGACACTCTCCTCCAGAAAAACTTAGACCAAACCAAACCAAAAACAAAAAAGATGGAAAAATTATGGGAAGAGACCGCCACAGTTTAGACATCTACATCCATGATTAATTTGGGAGAATAGATTTTGAATCTTAATGCTGGCGGACTTTGTTCGATAACTTTTCGTGAGTGGATTTGTGTTTGTTTTTCTTATAATTTTATTTTATGGAGGTGAGATTGACCTGGAGGGAGAGATTTAGAAAGGAGAAGAAATTTGGAGTTTCTTTTTATTCTCTTTTATTTTTAGGGCTAAAGAAGAATGTCTAGGAGTCAGCTTTTCTCTCCCTTCTTTTGGCACAAAGACTATGTGACCAGTGGTTAACTGCAAGTGCCCAAATGTTGTATTTTTTTTTCCCTCTCTTTTTGTACTTGTACTAAAAAAAACTTATTTAGTTATGTAACTAAAGTTAATTTAAAATTTTAGGTGATTTGTAGAAATAATTAAAAAATATATATATATCTATACATTATGGGGATTCTAACTATATTAAACCTAAGATAGTAACTGTCTTTTTATTTAAAAAAGATTTAGATGTTAGTTTTAAAAAATAAGAACTTTGGACTAAAGAAAATTGGAAGTTGGGGATGAGAGTTGTG

mRNA sequence

GGGATAATTATATTTTTGCAACAATGAATACATTACCGGCGACATTTTTATTTTTGTTTACTCTTCTTTAACCGAGCTCTTTAATTCACTGTGTGTCAACACACACAAAATTAAATGAGGTATTAAATAAAACCCACTTCCTGGGCTTATATATAATCCCCGTGCGAGCCCCCAATTCCCCTGCCCTGCACCCTGCACACCAAAAAAAAACTCTTCTTTTGATTCCTCTGTTTTCCCCTCTCCTCCATTAAATTTTCAGAAGAAGATCAAGATGAATCGGAGAACCAACGGACCCAAGCTGGAGCTGAAACTGAACCTGTCGCCCCCGCGGGCCAGGGGCGGAGTGGAATCGCCGAGCCGGGCCGCCACCGTGTCGCCGACGTCGTCGCCGCCGAGCTCGTGCGTGTCGTCGGAGGAGGGCGCGGCGGCGAGATACTCGAACAGCCCGGAGGCGACGTCGATGATGCTTGTGGGCTGCCCGCGGTGCCTGATGTACGTTATGCTGGCGGAGGAGGACCCCAAATGCCCCAAATGTAAGAGCACCGTCCTTCTCGACGTCCTCCACGACAACGCGACACTCTCCTCCAGAAAAACTTAGACCAAACCAAACCAAAAACAAAAAAGATGGAAAAATTATGGGAAGAGACCGCCACAGTTTAGACATCTACATCCATGATTAATTTGGGAGAATAGATTTTGAATCTTAATGCTGGCGGACTTTGTTCGATAACTTTTCGTGAGTGGATTTGTGTTTGTTTTTCTTATAATTTTATTTTATGGAGGTGAGATTGACCTGGAGGGAGAGATTTAGAAAGGAGAAGAAATTTGGAGTTTCTTTTTATTCTCTTTTATTTTTAGGGCTAAAGAAGAATGTCTAGGAGTCAGCTTTTCTCTCCCTTCTTTTGGCACAAAGACTATGTGACCAGTGGTTAACTGCAAGTGCCCAAATGTTGTATTTTTTTTTCCCTCTCTTTTTGTACTTGTACTAAAAAAAACTTATTTAGTTATGTAACTAAAGTTAATTTAAAATTTTAGGTGATTTGTAGAAATAATTAAAAAATATATATATATCTATACATTATGGGGATTCTAACTATATTAAACCTAAGATAGTAACTGTCTTTTTATTTAAAAAAGATTTAGATGTTAGTTTTAAAAAATAAGAACTTTGGACTAAAGAAAATTGGAAGTTGGGGATGAGAGTTGTG

Coding sequence (CDS)

ATGAATCGGAGAACCAACGGACCCAAGCTGGAGCTGAAACTGAACCTGTCGCCCCCGCGGGCCAGGGGCGGAGTGGAATCGCCGAGCCGGGCCGCCACCGTGTCGCCGACGTCGTCGCCGCCGAGCTCGTGCGTGTCGTCGGAGGAGGGCGCGGCGGCGAGATACTCGAACAGCCCGGAGGCGACGTCGATGATGCTTGTGGGCTGCCCGCGGTGCCTGATGTACGTTATGCTGGCGGAGGAGGACCCCAAATGCCCCAAATGTAAGAGCACCGTCCTTCTCGACGTCCTCCACGACAACGCGACACTCTCCTCCAGAAAAACTTAG

Protein sequence

MNRRTNGPKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAARYSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT

Homology

[Close]

BLAST of MC01g0654 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-31
Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MNRRTNGPKLELKLNLSPPRA--RGGVESPSRAATVSPTSSPPSSCVSSE---EGAAARY 60
           M+RR+  PKLELKLNLSPP +  R  V SPSR+AT SPT SPPSSCVSSE   +  + RY
Sbjct: 1   MSRRS--PKLELKLNLSPPTSSQRRMVRSPSRSATTSPT-SPPSSCVSSEMNQDEPSVRY 60

Query: 61  SNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNAT 103
           S SPE TSM+LVGCPRCLMYVML+E+DPKCPKCKSTVLLD LH+NAT
Sbjct: 61  STSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENAT 104

[Close]

BLAST of MC01g0654 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.6e-23
Identity = 62/110 (56.36%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 3   RRTNGPKLELKLNLSPPRARGG----VESPSRAATVSPTSSPPSSCVSSEEGAAARYSNS 62
           R  NGPKLEL+LNLSPP ++      V SP+R+ T S     PSSCVSSE         +
Sbjct: 4   RNKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTS-----PSSCVSSE----TNQEEN 63

Query: 63  PEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT 109
              TSM+LVGCPRCLMYVML+++DPKCPKCKSTVLLD L +NA  ++  T
Sbjct: 64  ETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTAT 104

[Close]

BLAST of MC01g0654 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.0e-08
Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 10  LELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAARYSNSPEATSMMLVGC 69
           L+LKLN+          SPS  +++   SS  S C    EG         EA SM++VGC
Sbjct: 11  LDLKLNI----------SPSLDSSLLTESSSSSLCSEEAEGGGG------EAKSMVVVGC 70

Query: 70  PRCLMYVMLA-EEDPKCPKCKSTVLLDVLHDNATLSS 106
           P C+MY++ + E DP+CP+C S VLLD L  N +  S
Sbjct: 71  PNCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKS 91

[Close]

BLAST of MC01g0654 vs. NCBI nr
Match: XP_022133057.1 (uncharacterized protein LOC111005745 [Momordica charantia])

HSP 1 Score: 209 bits (531), Expect = 8.00e-68
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MNRRTNGPKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAARYSNSPE 60
           MNRRTNGPKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAARYSNSPE
Sbjct: 1   MNRRTNGPKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAARYSNSPE 60

Query: 61  ATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT 108
           ATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT
Sbjct: 61  ATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT 108

[Close]

BLAST of MC01g0654 vs. NCBI nr
Match: XP_004143338.1 (uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacterized protein E6C27_scaffold541G00770 [Cucumis melo var. makuwa] >KGN48289.1 hypothetical protein Csa_003966 [Cucumis sativus])

HSP 1 Score: 164 bits (415), Expect = 4.31e-50
Identity = 91/113 (80.53%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 1   MNRRTNG------PKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAAR 60
           MNRR +G      PKLELKLNLSPPRA  GVESPSR+ATVSPTS PPSSCVSSEE    R
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTS-PPSSCVSSEEEM--R 60

Query: 61  YSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRK 107
           YSNSPE TSMMLVGCPRCLMYVML+EEDPKCPKCKSTVLLDVLHDNA + +RK
Sbjct: 61  YSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRK 110

[Close]

BLAST of MC01g0654 vs. NCBI nr
Match: XP_008462606.1 (PREDICTED: uncharacterized protein LOC103500924, partial [Cucumis melo])

HSP 1 Score: 164 bits (414), Expect = 7.16e-50
Identity = 91/114 (79.82%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 1   MNRRTNG------PKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAAR 60
           MNRR +G      PKLELKLNLSPPRA  GVESPSR+ATVSPTS PPSSCVSSEE    R
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTS-PPSSCVSSEEEM--R 60

Query: 61  YSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT 108
           YSNSPE TSMMLVGCPRCLMYVML+EEDPKCPKCKSTVLLDVLHDNA + + KT
Sbjct: 61  YSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTEKT 111

[Close]

BLAST of MC01g0654 vs. NCBI nr
Match: XP_022925998.1 (uncharacterized protein LOC111433248 [Cucurbita moschata] >KAG6604328.1 Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034480.1 hypothetical protein SDJN02_04209, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159 bits (403), Expect = 3.62e-48
Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0


Query: 1   MNRRTNG--------PKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAA 60
           MNRR +G        PKLELKLNLSPPRA  GVESPSR+ATVSPTS PPSSCVSSEE   
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTS-PPSSCVSSEEEMT 60

Query: 61  A---RYSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRK 107
               RYS+SPEATSMMLVGCPRCLMYVML+EEDPKCPKCKSTVLLDVLHDN+ + +R+
Sbjct: 61  VGRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRR 117

[Close]

BLAST of MC01g0654 vs. NCBI nr
Match: XP_022979077.1 (uncharacterized protein LOC111478822 [Cucurbita maxima])

HSP 1 Score: 159 bits (403), Expect = 3.62e-48
Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0


Query: 1   MNRRTNG--------PKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAA 60
           MNRR +G        PKLELKLNLSPPRA  GVESPSR+ATVSPTS PPSSCVSSEE   
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTS-PPSSCVSSEEEMT 60

Query: 61  A---RYSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRK 107
               RYS+SPEATSMMLVGCPRCLMYVML+EEDPKCPKCKSTVLLDVLHDN+ + +R+
Sbjct: 61  VGRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKNRR 117

[Close]

BLAST of MC01g0654 vs. ExPASy TrEMBL
Match: A0A6J1BVJ7 (uncharacterized protein LOC111005745 OS=Momordica charantia OX=3673 GN=LOC111005745 PE=4 SV=1)

HSP 1 Score: 209 bits (531), Expect = 3.87e-68
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MNRRTNGPKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAARYSNSPE 60
           MNRRTNGPKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAARYSNSPE
Sbjct: 1   MNRRTNGPKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAARYSNSPE 60

Query: 61  ATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT 108
           ATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT
Sbjct: 61  ATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT 108

[Close]

BLAST of MC01g0654 vs. ExPASy TrEMBL
Match: A0A5A7SGG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00770 PE=4 SV=1)

HSP 1 Score: 164 bits (415), Expect = 2.09e-50
Identity = 91/113 (80.53%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 1   MNRRTNG------PKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAAR 60
           MNRR +G      PKLELKLNLSPPRA  GVESPSR+ATVSPTS PPSSCVSSEE    R
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTS-PPSSCVSSEEEM--R 60

Query: 61  YSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRK 107
           YSNSPE TSMMLVGCPRCLMYVML+EEDPKCPKCKSTVLLDVLHDNA + +RK
Sbjct: 61  YSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRK 110

[Close]

BLAST of MC01g0654 vs. ExPASy TrEMBL
Match: A0A0A0KHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1)

HSP 1 Score: 164 bits (415), Expect = 2.09e-50
Identity = 91/113 (80.53%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 1   MNRRTNG------PKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAAR 60
           MNRR +G      PKLELKLNLSPPRA  GVESPSR+ATVSPTS PPSSCVSSEE    R
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTS-PPSSCVSSEEEM--R 60

Query: 61  YSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRK 107
           YSNSPE TSMMLVGCPRCLMYVML+EEDPKCPKCKSTVLLDVLHDNA + +RK
Sbjct: 61  YSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRK 110

[Close]

BLAST of MC01g0654 vs. ExPASy TrEMBL
Match: A0A1S3CHA8 (uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 3.47e-50
Identity = 91/114 (79.82%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 1   MNRRTNG------PKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAAR 60
           MNRR +G      PKLELKLNLSPPRA  GVESPSR+ATVSPTS PPSSCVSSEE    R
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTS-PPSSCVSSEEEM--R 60

Query: 61  YSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT 108
           YSNSPE TSMMLVGCPRCLMYVML+EEDPKCPKCKSTVLLDVLHDNA + + KT
Sbjct: 61  YSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTEKT 111

[Close]

BLAST of MC01g0654 vs. ExPASy TrEMBL
Match: A0A6J1IMT5 (uncharacterized protein LOC111478822 OS=Cucurbita maxima OX=3661 GN=LOC111478822 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 1.75e-48
Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0


Query: 1   MNRRTNG--------PKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAA 60
           MNRR +G        PKLELKLNLSPPRA  GVESPSR+ATVSPTS PPSSCVSSEE   
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTS-PPSSCVSSEEEMT 60

Query: 61  A---RYSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRK 107
               RYS+SPEATSMMLVGCPRCLMYVML+EEDPKCPKCKSTVLLDVLHDN+ + +R+
Sbjct: 61  VGRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKNRR 117

[Close]

BLAST of MC01g0654 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 137.1 bits (344), Expect = 8.3e-33
Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MNRRTNGPKLELKLNLSPPRA--RGGVESPSRAATVSPTSSPPSSCVSSE---EGAAARY 60
           M+RR+  PKLELKLNLSPP +  R  V SPSR+AT SPT SPPSSCVSSE   +  + RY
Sbjct: 1   MSRRS--PKLELKLNLSPPTSSQRRMVRSPSRSATTSPT-SPPSSCVSSEMNQDEPSVRY 60

Query: 61  SNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNAT 103
           S SPE TSM+LVGCPRCLMYVML+E+DPKCPKCKSTVLLD LH+NAT
Sbjct: 61  STSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENAT 104

[Close]

BLAST of MC01g0654 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 5.4e-24
Identity = 62/110 (56.36%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 3   RRTNGPKLELKLNLSPPRARGG----VESPSRAATVSPTSSPPSSCVSSEEGAAARYSNS 62
           R  NGPKLEL+LNLSPP ++      V SP+R+ T S     PSSCVSSE         +
Sbjct: 4   RNKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTS-----PSSCVSSE----TNQEEN 63

Query: 63  PEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT 109
              TSM+LVGCPRCLMYVML+++DPKCPKCKSTVLLD L +NA  ++  T
Sbjct: 64  ETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTAT 104

[Close]

BLAST of MC01g0654 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 2.9e-09
Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 10  LELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAARYSNSPEATSMMLVGC 69
           L+LKLN+          SPS  +++   SS  S C    EG         EA SM++VGC
Sbjct: 11  LDLKLNI----------SPSLDSSLLTESSSSSLCSEEAEGGGG------EAKSMVVVGC 70

Query: 70  PRCLMYVMLA-EEDPKCPKCKSTVLLDVLHDNATLSS 106
           P C+MY++ + E DP+CP+C S VLLD L  N +  S
Sbjct: 71  PNCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKS 91

[Close]

BLAST of MC01g0654 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 3.0e-06
Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 35 SPTSSPPSSCVSS----EEGAAARYSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKS 94
          S TSS  +SC++     +E  A+ + +  EA  M+++GC  C+MYVM+ +E  +CPKCK 
Sbjct: 34 SDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCPKCKC 93

[Close]

BLAST of MC01g0654 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04
Identity = 19/50 (38.00%), Postives = 30/50 (60.00%), Query Frame = 0


Query: 48  EEGAAARYSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVL 98
           ++G     +++  A S +  GCP CL YV +A+ +PKCP+C S V L  +
Sbjct: 199 DDGVYDGTASATVAASQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPLPAM 248

The following BLAST results are available for this feature:

BLAST of MC01g0654 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	1.2e-31	72.90	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	7.6e-23	56.36	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FMS4	4.0e-08	40.21	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of MC01g0654 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133057.1	8.00e-68	100.00	uncharacterized protein LOC111005745 [Momordica charantia]	[more]
XP_004143338.1	4.31e-50	80.53	uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacter...	[more]
XP_008462606.1	7.16e-50	79.82	PREDICTED: uncharacterized protein LOC103500924, partial [Cucumis melo]	[more]
XP_022925998.1	3.62e-48	75.42	uncharacterized protein LOC111433248 [Cucurbita moschata] >KAG6604328.1 Protein ...	[more]
XP_022979077.1	3.62e-48	75.42	uncharacterized protein LOC111478822 [Cucurbita maxima]	[more]

BLAST of MC01g0654 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVJ7	3.87e-68	100.00	uncharacterized protein LOC111005745 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A5A7SGG8	2.09e-50	80.53	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KHJ4	2.09e-50	80.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1	[more]
A0A1S3CHA8	3.47e-50	79.82	uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=...	[more]
A0A6J1IMT5	1.75e-48	75.42	uncharacterized protein LOC111478822 OS=Cucurbita maxima OX=3661 GN=LOC111478822...	[more]

BLAST of MC01g0654 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	8.3e-33	72.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	5.4e-24	56.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	2.9e-09	40.21	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	3.0e-06	40.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G16500.1	1.2e-04	38.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..57
None	No IPR available	PANTHER	PTHR33177:SF40	SUBFAMILY NOT NAMED	coord: 1..107
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0654.1	MC01g0654.1	mRNA