MC01g0613 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTGATTGTTATGGTTTTGAGCTGCTGCTTATGCAAGAGCCAAGAGATGGAGATGGAGATGGAGATGGCGTGTGATGAGATATATGTGGTTCGTGAAGGAGAAACTTTGCACACAATCAGTGACAAATGTGGAGATCCTTTTATTCTCCAACACAATCCTCATATTAATGATTCTGATGATGTTTTTCCTGGTTTGGTCATCAAGATCACTCCTTTTCGCCATACTATTCATCCCAATTTTCTC GTGATTGTTATGGTTTTGAGCTGCTGCTTATGCAAGAGCCAAGAGATGGAGATGGAGATGGAGATGGCGTGTGATGAGATATATGTGGTTCGTGAAGGAGAAACTTTGCACACAATCAGTGACAAATGTGGAGATCCTTTTATTCTCCAACACAATCCTCATATTAATGATTCTGATGATGTTTTTCCTGGTTTGGTCATCAAGATCACTCCTTTTCGCCATACTATTCATCCCAATTTTCTC GTGATTGTTATGGTTTTGAGCTGCTGCTTATGCAAGAGCCAAGAGATGGAGATGGAGATGGAGATGGCGTGTGATGAGATATATGTGGTTCGTGAAGGAGAAACTTTGCACACAATCAGTGACAAATGTGGAGATCCTTTTATTCTCCAACACAATCCTCATATTAATGATTCTGATGATGTTTTTCCTGGTTTGGTCATCAAGATCACTCCTTTTCGCCATACTATTCATCCCAATTTTCTC VIVMVLSCCLCKSQEMEMEMEMACDEIYVVREGETLHTISDKCGDPFILQHNPHINDSDDVFPGLVIKITPFRHTIHPNFL Homology
BLAST of MC01g0613 vs. NCBI nr
Match: AES82004.1 (peptidoglycan-binding LysM domain protein [Medicago truncatula]) HSP 1 Score: 105 bits (263), Expect = 1.34e-27 Identity = 51/81 (62.96%), Postives = 64/81 (79.01%), Query Frame = 0
BLAST of MC01g0613 vs. NCBI nr
Match: RHN48654.1 (putative LysM domain-containing protein [Medicago truncatula]) HSP 1 Score: 105 bits (263), Expect = 1.73e-27 Identity = 51/81 (62.96%), Postives = 64/81 (79.01%), Query Frame = 0
BLAST of MC01g0613 vs. NCBI nr
Match: XP_019186406.1 (PREDICTED: uncharacterized protein LOC109181107 [Ipomoea nil]) HSP 1 Score: 105 bits (261), Expect = 4.26e-27 Identity = 52/85 (61.18%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of MC01g0613 vs. NCBI nr
Match: KAG6595189.1 (hypothetical protein SDJN03_11742, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027207.1 hypothetical protein SDJN02_11218, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 103 bits (257), Expect = 1.03e-26 Identity = 49/64 (76.56%), Postives = 53/64 (82.81%), Query Frame = 0
BLAST of MC01g0613 vs. NCBI nr
Match: CAA2970656.1 (Peptidoglycan-binding lysin domain-containing [Olea europaea subsp. europaea]) HSP 1 Score: 103 bits (258), Expect = 1.06e-26 Identity = 50/78 (64.10%), Postives = 61/78 (78.21%), Query Frame = 0
BLAST of MC01g0613 vs. ExPASy TrEMBL
Match: G7L607 (Peptidoglycan-binding LysM domain protein OS=Medicago truncatula OX=3880 GN=MTR_7g104250 PE=4 SV=1) HSP 1 Score: 105 bits (263), Expect = 6.47e-28 Identity = 51/81 (62.96%), Postives = 64/81 (79.01%), Query Frame = 0
BLAST of MC01g0613 vs. ExPASy TrEMBL
Match: A0A396HA20 (Putative LysM domain-containing protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr7g0266071 PE=4 SV=1) HSP 1 Score: 105 bits (263), Expect = 8.37e-28 Identity = 51/81 (62.96%), Postives = 64/81 (79.01%), Query Frame = 0
BLAST of MC01g0613 vs. ExPASy TrEMBL
Match: A0A5N6LJ20 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_42020 PE=4 SV=1) HSP 1 Score: 103 bits (258), Expect = 6.07e-27 Identity = 51/80 (63.75%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of MC01g0613 vs. ExPASy TrEMBL
Match: A0A2G2VUW0 (LysM domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_24433 PE=4 SV=1) HSP 1 Score: 103 bits (257), Expect = 6.66e-27 Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 0
BLAST of MC01g0613 vs. ExPASy TrEMBL
Match: A0A2G3BGH4 (LysM domain-containing protein OS=Capsicum chinense OX=80379 GN=BC332_26427 PE=4 SV=1) HSP 1 Score: 103 bits (257), Expect = 6.66e-27 Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 0
BLAST of MC01g0613 vs. TAIR 10
Match: AT5G62150.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 91.3 bits (225), Expect = 3.9e-19 Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MC01g0613 vs. TAIR 10
Match: AT3G52790.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 85.9 bits (211), Expect = 1.6e-17 Identity = 36/49 (73.47%), Postives = 45/49 (91.84%), Query Frame = 0
BLAST of MC01g0613 vs. TAIR 10
Match: AT4G25433.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 85.1 bits (209), Expect = 2.8e-17 Identity = 36/59 (61.02%), Postives = 48/59 (81.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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