MC01g0391 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0391
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RING-CH-type domain-containing protein
Location	MC01: 10607114 .. 10608377 (+)
RNA-Seq Expression	MC01g0391
Synteny	MC01g0391

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGAGACTGCAGGATTTGCCATTTGGGTTTGGAGAGCAGTAGCGATGAGTGTGGAATTGGAATTGAATTGGGATGTTCTTGTAAGAACGATTTGGGTGCTGCCCACAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGTGAGTCTCAAATCCCATTTACAAAATGCCCTTTTAAGAATTAATTAGTTTTGAGGGGTTTTCTTTTAAATCCTTTGTTGGGCAAAGGGTAAGAAAGAAATTAAGGGGAAATTAAGAATAATGTTATGTTGTCTCGGTCAAATTAAAAGGGAATGGAATACAATAGGGAATTGAGGAGTGAAGCATTGGAAAAAACTCTCTCTACCTTCAAATATTATTCTATTGCCTTTAATGGACATAGGAATCTCTTCTACCTTTCTTTTTGAAGCATAAAGCGGAGATTAATTAGACATCTCTACTCTATAGTGTCATGTTTGTTTATGTTCAATGGTATTATAAACTACGAAAATCTGAACATAGCTCCACTAGTTAAAATACCTAATCTCTAATTGAAATGTCGTGAATTTGAATCTTCAGACTCACATGTTGTGTTAAAAAAATAATATTATAATTTATGATTCTTAATGTATGTATATTATATACTTTCTATATAGTGTTAAAAGTGTTAAAGGAGCTCGTAAAAGATGAAATTTATCATAGTTCATGAGTTTAAATTTTTGGGCTAATTAGCAATTTAACACGGTATTATATTAGGAAGTCCTGCATTCAAACTCTTGTAATGTTATTTCATCTCCATTTAATATTGATTATCATCAACTGCGTCTTGTGCAAATTTTCAAACTCACAAGTGAGGGAGGGTGTTAAAGCTAATATATTGATCTGGTCAAAGAGTTCATGAGGAATCTCGAGTTATAAAAGACTTCAAACATTAAGTTCTAAGATAAAGATTGTCTTGCTGAACATAGACTTAAGAACAATTTTTTTTAATTATGTAAATTAGTCTAATTTGAATGTGGGTGGTTTTTGTTAGGACGTGTGAGATATGTCATTCAGTGGTAAGCAATGTCATTGGAGCACATGAAGTTGAACCAGTAGAGCAACTCAGTGAGTCGAACAATGCAACGGTATCGACAACCACCGTTGCGACGTCGGTGACCGGTGGTCCCAATGGTGGCCGGAGCTTTTGGCAAGTCCACCGTGTGCTGAATTTTCTTCTGGCTTGTATGGTATTTGCTTTTGTCATATCTTGGCTCTTCCATTTCAATGTGCCATCA

mRNA sequence

GAGAGAGACTGCAGGATTTGCCATTTGGGTTTGGAGAGCAGTAGCGATGAGTGTGGAATTGGAATTGAATTGGGATGTTCTTGTAAGAACGATTTGGGTGCTGCCCACAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACGTGTGAGATATGTCATTCAGTGGTAAGCAATGTCATTGGAGCACATGAAGTTGAACCAGTAGAGCAACTCAGTGAGTCGAACAATGCAACGGTATCGACAACCACCGTTGCGACGTCGGTGACCGGTGGTCCCAATGGTGGCCGGAGCTTTTGGCAAGTCCACCGTGTGCTGAATTTTCTTCTGGCTTGTATGGTATTTGCTTTTGTCATATCTTGGCTCTTCCATTTCAATGTGCCATCA

Coding sequence (CDS)

GAGAGAGACTGCAGGATTTGCCATTTGGGTTTGGAGAGCAGTAGCGATGAGTGTGGAATTGGAATTGAATTGGGATGTTCTTGTAAGAACGATTTGGGTGCTGCCCACAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACGTGTGAGATATGTCATTCAGTGGTAAGCAATGTCATTGGAGCACATGAAGTTGAACCAGTAGAGCAACTCAGTGAGTCGAACAATGCAACGGTATCGACAACCACCGTTGCGACGTCGGTGACCGGTGGTCCCAATGGTGGCCGGAGCTTTTGGCAAGTCCACCGTGTGCTGAATTTTCTTCTGGCTTGTATGGTATTTGCTTTTGTCATATCTTGGCTCTTCCATTTCAATGTGCCATCA

Protein sequence

ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVSNVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

Homology

[Close]

BLAST of MC01g0391 vs. NCBI nr
Match: XP_022151515.1 (uncharacterized protein LOC111019441, partial [Momordica charantia])

HSP 1 Score: 277 bits (708), Expect = 2.03e-93
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS
Sbjct: 46  ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 105

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV
Sbjct: 106 NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 165

Query: 121 ISWLFHFNVPS 131
           ISWLFHFNVPS
Sbjct: 166 ISWLFHFNVPS 176

[Close]

BLAST of MC01g0391 vs. NCBI nr
Match: KAG6595366.1 (hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226 bits (577), Expect = 1.21e-73
Identity = 106/131 (80.92%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           ERDCRICHLGLES+S ECG  IELGCSCKNDL AAHKHCAEAWFKIRGNKTCEICHS+V 
Sbjct: 34  ERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQ 93

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           NV G HE+E +EQL E NN T+STTTVA SV   P+GGR FWQVHRVLNFLLAC+VFAFV
Sbjct: 94  NV-GVHELEQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFV 153

Query: 121 ISWLFHFNVPS 131
           ISWLFHFN+ S
Sbjct: 154 ISWLFHFNMRS 163

[Close]

BLAST of MC01g0391 vs. NCBI nr
Match: KAG7027374.1 (hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226 bits (577), Expect = 1.21e-73
Identity = 106/131 (80.92%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           ERDCRICHLGLES+S ECG  IELGCSCKNDL AAHKHCAEAWFKIRGNKTCEICHS+V 
Sbjct: 34  ERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQ 93

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           NV G HE+E +EQL E NN T+STTTVA SV   P+GGR FWQVHRVLNFLLAC+VFAFV
Sbjct: 94  NV-GVHELEQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFV 153

Query: 121 ISWLFHFNVPS 131
           ISWLFHFN+ S
Sbjct: 154 ISWLFHFNMRS 163

[Close]

BLAST of MC01g0391 vs. NCBI nr
Match: XP_023517920.1 (uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225 bits (574), Expect = 3.48e-73
Identity = 106/131 (80.92%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           ERDCRICHLGLES+S ECG  IELGCSCKNDL AAHKHCAEAWFKIRGNKTCEICHS+V 
Sbjct: 34  ERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQ 93

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           NV G HE+E +EQL E NN T+STTTVA SV   P+GGR FWQVHRVLNFLLAC+VFAFV
Sbjct: 94  NVGGVHELEQMEQLHELNNGTLSTTTVAASV-AAPDGGRRFWQVHRVLNFLLACIVFAFV 153

Query: 121 ISWLFHFNVPS 131
           ISWLFHFN+ S
Sbjct: 154 ISWLFHFNMRS 163

[Close]

BLAST of MC01g0391 vs. NCBI nr
Match: XP_038883458.1 (uncharacterized protein LOC120074413 [Benincasa hispida])

HSP 1 Score: 224 bits (570), Expect = 1.56e-72
Identity = 105/131 (80.15%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           ERDCRICHLGL S+S+E G+GIELGC CKNDL  AHKHCAEAWFKIRGNKTCEICHS+V 
Sbjct: 36  ERDCRICHLGLVSNSNEFGVGIELGCCCKNDLSTAHKHCAEAWFKIRGNKTCEICHSIVR 95

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           NV+   E E  EQL ESNN TVST TVA SV   P+GGRSFW VHRVLNFLLACMVFAFV
Sbjct: 96  NVMVVREPEQTEQLHESNNGTVSTATVAASVAATPSGGRSFWHVHRVLNFLLACMVFAFV 155

Query: 121 ISWLFHFNVPS 131
           ISWLFHFNVPS
Sbjct: 156 ISWLFHFNVPS 166

[Close]

BLAST of MC01g0391 vs. ExPASy TrEMBL
Match: A0A6J1DBE4 (uncharacterized protein LOC111019441 OS=Momordica charantia OX=3673 GN=LOC111019441 PE=4 SV=1)

HSP 1 Score: 277 bits (708), Expect = 9.85e-94
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS
Sbjct: 46  ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 105

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV
Sbjct: 106 NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 165

Query: 121 ISWLFHFNVPS 131
           ISWLFHFNVPS
Sbjct: 166 ISWLFHFNVPS 176

[Close]

BLAST of MC01g0391 vs. ExPASy TrEMBL
Match: A0A6J1CWG7 (uncharacterized protein LOC111015024 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015024 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 2.90e-63
Identity = 97/131 (74.05%), Postives = 108/131 (82.44%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           ERDCRICHLGLES+S E GI IELGCSCK+DL AAHKHCAE WFKIRGNKTCEICHS+  
Sbjct: 104 ERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIAR 163

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           N++G HEVE  EQ +ESNNA+ ST  VA S+    +  +SFW+ HR LNFLLACMVFAFV
Sbjct: 164 NILGPHEVELTEQSTESNNAS-STAAVAASIPSSDS--QSFWRGHRFLNFLLACMVFAFV 223

Query: 121 ISWLFHFNVPS 131
           ISWLFHFNVPS
Sbjct: 224 ISWLFHFNVPS 231

[Close]

BLAST of MC01g0391 vs. ExPASy TrEMBL
Match: A0A1S3B5A7 (uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=4 SV=1)

HSP 1 Score: 201 bits (512), Expect = 4.11e-63
Identity = 97/131 (74.05%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           ERDCRICHLGLES+S E GI IELGCSCK+DL AAHKHCAE WFKI+GNKTCEICHS+  
Sbjct: 104 ERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIAR 163

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           N++G +EVE  EQ +ESNNA+ STTTVA S+    +   SFW+ HR LNFLLACMVFAFV
Sbjct: 164 NILGPNEVELTEQSNESNNAS-STTTVAASIPSSDS--HSFWRGHRFLNFLLACMVFAFV 223

Query: 121 ISWLFHFNVPS 131
           ISWLFHFNVPS
Sbjct: 224 ISWLFHFNVPS 231

[Close]

BLAST of MC01g0391 vs. ExPASy TrEMBL
Match: A0A0A0LAC9 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733180 PE=4 SV=1)

HSP 1 Score: 200 bits (509), Expect = 1.17e-62
Identity = 97/131 (74.05%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           ERDCRICHLGLES+S E GI IELGCSCK+DL AAHKHCAE WFKI+GNKTCEICHS+  
Sbjct: 104 ERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIAR 163

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           N++G +EVE  EQ +ESNNA+ STTTVA S+    +  +SFW  HR LNFLLACMVFAFV
Sbjct: 164 NILGPNEVELTEQSNESNNAS-STTTVAASIPSSDS--QSFWCGHRFLNFLLACMVFAFV 223

Query: 121 ISWLFHFNVPS 131
           ISWLFHFNVPS
Sbjct: 224 ISWLFHFNVPS 231

[Close]

BLAST of MC01g0391 vs. ExPASy TrEMBL
Match: A0A6J1I5G1 (uncharacterized protein LOC111470088 OS=Cucurbita maxima OX=3661 GN=LOC111470088 PE=4 SV=1)

HSP 1 Score: 200 bits (508), Expect = 1.72e-62
Identity = 97/131 (74.05%), Postives = 108/131 (82.44%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           ERDCRICHLGLES+S E GI IELGCSCK+DL AAHKHCAE WFKI+GNKTCEICHSV  
Sbjct: 105 ERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSVAR 164

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           N++G +EVE  EQ +ESNNA+ STT VA S+    +   SFW+ HR LNFLLACMVFAFV
Sbjct: 165 NILGPNEVESTEQSNESNNAS-STTAVAASIPSSDS--PSFWRGHRFLNFLLACMVFAFV 224

Query: 121 ISWLFHFNVPS 131
           ISWLFHFNVPS
Sbjct: 225 ISWLFHFNVPS 232

[Close]

BLAST of MC01g0391 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.5e-44
Identity = 87/133 (65.41%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           ERDCRICH+ L++++ E G+ IELGCSCK DL AAHKHCAE WFKI+GNK CE+C S+  
Sbjct: 76  ERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAG 135

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPN--GGRSFWQVHRVLNFLLACMVFA 120
           NV+G+ EVE  E  +E+N   V   T+ TS   GP    GRSFWQ HR LNFLLACMVFA
Sbjct: 136 NVVGSVEVESEESRNEANG--VENLTLRTS---GPRLVEGRSFWQGHRFLNFLLACMVFA 195

Query: 121 FVISWLFHFNVPS 132
           FVISWLFHFNVPS
Sbjct: 196 FVISWLFHFNVPS 203

[Close]

BLAST of MC01g0391 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 4.1e-34
Identity = 71/131 (54.20%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           E+DCRICHLGLESS  ECG  + LGCSCK+DLG  HK CA+ WFKI+GNKTCEIC S+  
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQ 134

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           N     + E  +   E+N   V      T V    +  R   + +R LNFLL CMV AFV
Sbjct: 135 NFFKV-DNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLTCMVCAFV 194

Query: 121 ISWLFHFNVPS 132
           ISW FHFN+PS
Sbjct: 195 ISWFFHFNLPS 204

[Close]

BLAST of MC01g0391 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 5.0e-32
Identity = 71/131 (54.20%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVS 60
           E+DCRICHLG+E+S    G  IELGCSCK+DL  AH+ CAE WFKI+G+KTCEIC SV  
Sbjct: 81  EKDCRICHLGVETSG---GGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVAR 140

Query: 61  NVIGAHEVEPVEQLSESNNATVSTTTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFV 120
           NV GA+E+  V    E         T A    GG     + WQ  RV+N +LACMVF F 
Sbjct: 141 NVGGANEM--VGSTMEERELRNGEET-AAGEGGGATVVENRWQPQRVVNLVLACMVFGFF 200

Query: 121 ISWLFHFNVPS 132
           ISW+FHF+V S
Sbjct: 201 ISWIFHFHVSS 205

[Close]

BLAST of MC01g0391 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 9.1e-26
Identity = 69/159 (43.40%), Postives = 80/159 (50.31%), Query Frame = 0


Query: 2   RDCRICHLGLE---------------SSSDE----------------CGIGIELGCSCKN 61
           RDCRICHL LE               S  DE                 G+ ++LGCSCK 
Sbjct: 79  RDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKG 138

Query: 62  DLGAAHKHCAEAWFKIRGNKTCEICHSVVSNVIGAHEVEPVEQLSESNNATVSTTTVATS 121
           DLG AH  CAE WFKI+GN TCEIC ++  NV G       +   ES  +T S      S
Sbjct: 139 DLGVAHSKCAETWFKIKGNMTCEICGAMALNVAGE------QSNPESTASTHSQAAAGQS 198

Query: 122 VTGGPNGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNV 130
           +T      R  W    V+NFLLA MVFAFV+SWLFHF V
Sbjct: 199 LT--QTEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of MC01g0391 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 1   ERDCRICHLGLESSSDECGIGIELGCSCKNDLGAAHKHCAEAWFKIRGNK 51
           E+DCRICHLGLESS  ECG  + LGCSCK+DLG  HK CA+ WFKI+GNK
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNK 124

The following BLAST results are available for this feature:

BLAST of MC01g0391 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g0391 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151515.1	2.03e-93	100.00	uncharacterized protein LOC111019441, partial [Momordica charantia]	[more]
KAG6595366.1	1.21e-73	80.92	hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7027374.1	1.21e-73	80.92	hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023517920.1	3.48e-73	80.92	uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038883458.1	1.56e-72	80.15	uncharacterized protein LOC120074413 [Benincasa hispida]	[more]

BLAST of MC01g0391 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBE4	9.85e-94	100.00	uncharacterized protein LOC111019441 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1CWG7	2.90e-63	74.05	uncharacterized protein LOC111015024 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3B5A7	4.11e-63	74.05	uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=...	[more]
A0A0A0LAC9	1.17e-62	74.05	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73318...	[more]
A0A6J1I5G1	1.72e-62	74.05	uncharacterized protein LOC111470088 OS=Cucurbita maxima OX=3661 GN=LOC111470088...	[more]

BLAST of MC01g0391 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	1.5e-44	65.41	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	4.1e-34	54.20	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	5.0e-32	54.20	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	9.1e-26	43.40	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.1	1.2e-17	72.00	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 3..56 e-value: 8.7E-14 score: 61.8
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 4..55 e-value: 2.3E-8 score: 34.0
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 1..62 score: 17.398464
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 1..65 e-value: 3.3E-13 score: 51.0
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 1..131
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 1..131
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 4..56 e-value: 3.45924E-11 score: 52.7148
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 2..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0391.1	MC01g0391.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding