MC01g0310 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0310
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Methyltransferase-related protein
Location	MC01: 9845185 .. 9845409 (-)
RNA-Seq Expression	MC01g0310
Synteny	MC01g0310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCCTCTCCGATTCATCCTCGTGTTCCTCTCCGCAGTTCTGGCCGGATACGTCGCCTGGAGATCCGCTTCTTCTTCTTCGATTTCGTCCTCCGATGTCGCTTCGGAGAAATCGCCGCCGTCCGACGAGAAGCGAGGAGTAGGGACGACAATTCAGAATGGATTCTGGATCTTCGTGGACATGGCGAGCGGGAGATACCTGTGGAGGAATTTGAACGGATCA

mRNA sequence

ATGTGTCCTCTCCGATTCATCCTCGTGTTCCTCTCCGCAGTTCTGGCCGGATACGTCGCCTGGAGATCCGCTTCTTCTTCTTCGATTTCGTCCTCCGATGTCGCTTCGGAGAAATCGCCGCCGTCCGACGAGAAGCGAGGAGTAGGGACGACAATTCAGAATGGATTCTGGATCTTCGTGGACATGGCGAGCGGGAGATACCTGTGGAGGAATTTGAACGGATCA

Coding sequence (CDS)

ATGTGTCCTCTCCGATTCATCCTCGTGTTCCTCTCCGCAGTTCTGGCCGGATACGTCGCCTGGAGATCCGCTTCTTCTTCTTCGATTTCGTCCTCCGATGTCGCTTCGGAGAAATCGCCGCCGTCCGACGAGAAGCGAGGAGTAGGGACGACAATTCAGAATGGATTCTGGATCTTCGTGGACATGGCGAGCGGGAGATACCTGTGGAGGAATTTGAACGGATCA

Protein sequence

MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVASEKSPPSDEKRGVGTTIQNGFWIFVDMASGRYLWRNLNGS

Homology

[Close]

BLAST of MC01g0310 vs. NCBI nr
Match: XP_022156242.1 (uncharacterized protein LOC111023174 [Momordica charantia])

HSP 1 Score: 147 bits (372), Expect = 1.75e-44
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVASEKSPPSDEKRGVGTTIQNGFWIFV 60
          MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVASEKSPPSDEKRGVGTTIQNGFWIFV
Sbjct: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVASEKSPPSDEKRGVGTTIQNGFWIFV 60

Query: 61 DMASGRYLWRNLNGS 75
          DMASGRYLWRNLNGS
Sbjct: 61 DMASGRYLWRNLNGS 75

[Close]

BLAST of MC01g0310 vs. NCBI nr
Match: KAG6595503.1 (hypothetical protein SDJN03_12056, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027489.1 hypothetical protein SDJN02_11502, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100 bits (250), Expect = 1.19e-25
Identity = 59/88 (67.05%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSD------VASEKSPPSDEKR-------G 60
          MCPLRFILVFLSA+LAGYVAWRSASSSS SSS       V SEKSP   E R       G
Sbjct: 1  MCPLRFILVFLSAILAGYVAWRSASSSSSSSSSSDLFPAVESEKSPLESENRRVEEDGFG 60

Query: 61 VGTTIQNGFWIFVDMASGRYLWRNLNGS 75
          +   IQ GFWIFVDMASGR+LWRNL+ S
Sbjct: 61 LKKMIQKGFWIFVDMASGRFLWRNLHSS 88

[Close]

BLAST of MC01g0310 vs. NCBI nr
Match: XP_038882347.1 (uncharacterized protein LOC120073608 [Benincasa hispida])

HSP 1 Score: 99.8 bits (247), Expect = 3.69e-25
Identity = 58/92 (63.04%), Postives = 63/92 (68.48%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVAS----------EKSPPSDEKR---- 60
          MCPLRFILVFLSA+LAGY AWRSASSSS SSS  +S          +KSP   E R    
Sbjct: 1  MCPLRFILVFLSAILAGYFAWRSASSSSSSSSSSSSSDIFQATEDSDKSPAETENRSVTE 60

Query: 61 ---GVGTTIQNGFWIFVDMASGRYLWRNLNGS 75
             G+  TIQNGFW FVDMASGR+LWRNLN S
Sbjct: 61 DGFGLKRTIQNGFWTFVDMASGRFLWRNLNAS 92

[Close]

BLAST of MC01g0310 vs. NCBI nr
Match: KAE8649374.1 (hypothetical protein Csa_021566 [Cucumis sativus])

HSP 1 Score: 99.0 bits (245), Expect = 2.58e-24
Identity = 56/86 (65.12%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDV-----ASEKSPPSDEKR-------GV 60
          MCPLRFIL+FLSA+LAGY AWRSASSSS SSSD+     AS+KS P +E R       GV
Sbjct: 1  MCPLRFILLFLSAILAGYFAWRSASSSS-SSSDIFQATEASDKSAPENENRSGTEDRLGV 60

Query: 61 GTTIQNGFWIFVDMASGRYLWRNLNG 74
             ++ GFW FVDMASGR+LWRNLNG
Sbjct: 61 NRMVEKGFWTFVDMASGRFLWRNLNG 85

[Close]

BLAST of MC01g0310 vs. NCBI nr
Match: XP_008441985.1 (PREDICTED: uncharacterized protein LOC103485982 [Cucumis melo] >KAA0060106.1 uncharacterized protein E6C27_scaffold39G00250 [Cucumis melo var. makuwa] >TYK08421.1 uncharacterized protein E5676_scaffold654G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 2.40e-23
Identity = 55/95 (57.89%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVAS-------------EKSPPSDEKR- 60
          MCPLRFILVFLSA+LAGY AWRSASSSS SSS  +S             +KS P +E R 
Sbjct: 1  MCPLRFILVFLSAILAGYFAWRSASSSSSSSSSSSSSSSSDIFQATEAPDKSAPQNENRS 60

Query: 61 ------GVGTTIQNGFWIFVDMASGRYLWRNLNGS 75
                GV   ++NGFW FVDMASGR+LWRN+N S
Sbjct: 61 VREDGFGVKRMVENGFWTFVDMASGRFLWRNMNES 95

[Close]

BLAST of MC01g0310 vs. ExPASy TrEMBL
Match: A0A6J1DRJ4 (uncharacterized protein LOC111023174 OS=Momordica charantia OX=3673 GN=LOC111023174 PE=4 SV=1)

HSP 1 Score: 147 bits (372), Expect = 8.49e-45
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVASEKSPPSDEKRGVGTTIQNGFWIFV 60
          MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVASEKSPPSDEKRGVGTTIQNGFWIFV
Sbjct: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVASEKSPPSDEKRGVGTTIQNGFWIFV 60

Query: 61 DMASGRYLWRNLNGS 75
          DMASGRYLWRNLNGS
Sbjct: 61 DMASGRYLWRNLNGS 75

[Close]

BLAST of MC01g0310 vs. ExPASy TrEMBL
Match: A0A0A0KWN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192100 PE=4 SV=1)

HSP 1 Score: 100 bits (250), Expect = 4.98e-26
Identity = 57/87 (65.52%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDV-----ASEKSPPSDEKR-------GV 60
          MCPLRFIL+FLSA+LAGY AWRSASSSS SSSD+     AS+KS P +E R       GV
Sbjct: 1  MCPLRFILLFLSAILAGYFAWRSASSSS-SSSDIFQATEASDKSAPENENRSGTEDRLGV 60

Query: 61 GTTIQNGFWIFVDMASGRYLWRNLNGS 75
             ++ GFW FVDMASGR+LWRNLNGS
Sbjct: 61 NRMVEKGFWTFVDMASGRFLWRNLNGS 86

[Close]

BLAST of MC01g0310 vs. ExPASy TrEMBL
Match: A0A5A7V0V1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00360 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.16e-23
Identity = 55/95 (57.89%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVAS-------------EKSPPSDEKR- 60
          MCPLRFILVFLSA+LAGY AWRSASSSS SSS  +S             +KS P +E R 
Sbjct: 1  MCPLRFILVFLSAILAGYFAWRSASSSSSSSSSSSSSSSSDIFQATEAPDKSAPQNENRS 60

Query: 61 ------GVGTTIQNGFWIFVDMASGRYLWRNLNGS 75
                GV   ++NGFW FVDMASGR+LWRN+N S
Sbjct: 61 VREDGFGVKRMVENGFWTFVDMASGRFLWRNMNES 95

[Close]

BLAST of MC01g0310 vs. ExPASy TrEMBL
Match: A0A1S3B5E4 (uncharacterized protein LOC103485982 OS=Cucumis melo OX=3656 GN=LOC103485982 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.16e-23
Identity = 55/95 (57.89%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVAS-------------EKSPPSDEKR- 60
          MCPLRFILVFLSA+LAGY AWRSASSSS SSS  +S             +KS P +E R 
Sbjct: 1  MCPLRFILVFLSAILAGYFAWRSASSSSSSSSSSSSSSSSDIFQATEAPDKSAPQNENRS 60

Query: 61 ------GVGTTIQNGFWIFVDMASGRYLWRNLNGS 75
                GV   ++NGFW FVDMASGR+LWRN+N S
Sbjct: 61 VREDGFGVKRMVENGFWTFVDMASGRFLWRNMNES 95

[Close]

BLAST of MC01g0310 vs. ExPASy TrEMBL
Match: A0A6A6KHE5 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_004873 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.27e-22
Identity = 50/77 (64.94%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSS----SISSSDVASEKSPPSDEKR-GVGTTIQNG 60
          MCPLRFILVF SAVLAGY AWR+  SS    SI+S D A E+ P +D++   V   IQNG
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEIESINSDDSAVERKPLNDKQEFNVNKMIQNG 60

Query: 61 FWIFVDMASGRYLWRNL 72
          FW+FVDMASG+YLWRNL
Sbjct: 61 FWVFVDMASGKYLWRNL 77

[Close]

BLAST of MC01g0310 vs. TAIR 10
Match: AT5G18150.1 (Methyltransferase-related protein )

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-16
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSS-SISSSDVASEKSPPSDEKRGVGTTIQNGFWIF 60
          MCP+RF+LVF SAVLAGY AW++ SSS    S D  +EK   + +K+     ++NGFW+F
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSSSPEFDSPDELNEKQELNLKKK-----MENGFWVF 60

Query: 61 VDMASGRYLWRNL 73
          VDMASGRYLWRNL
Sbjct: 61 VDMASGRYLWRNL 68

[Close]

BLAST of MC01g0310 vs. TAIR 10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Methyltransferase-related protein (TAIR:AT5G18150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-15
Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVASEKSPPSDEKRGVGTTIQNGFWIFV 60
          MCPLRF+LVF SAVLAGY+AWR+ +S+    SD   +      +       + NG W FV
Sbjct: 1  MCPLRFVLVFFSAVLAGYIAWRTVNSTPELFSDELLQAEAKEKQGLDFKRKMDNGLWTFV 60

Query: 61 DMASGRYLWRNL 73
          DMASGRYLWRNL
Sbjct: 61 DMASGRYLWRNL 72

[Close]

BLAST of MC01g0310 vs. TAIR 10
Match: AT5G58375.1 (Methyltransferase-related protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.8e-10
Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 1  MCPLRFILVFLSAVLAGYVAWRSASSSSISSSDVASEKSPPSDEK-----RGVGTTIQNG 60
          MCPLR IL+FLSA LAG+   +  +S+S    D +   +  +D+        VG  +++G
Sbjct: 1  MCPLRLILIFLSATLAGFFVLQKLNSTSDDPLDDSFTDAEHADDDSVSGFSKVGMAMKSG 60

Query: 61 FWIFVDMASGRYLWRNL 73
          FW  VDMASGRYLW NL
Sbjct: 61 FWTCVDMASGRYLWNNL 77

The following BLAST results are available for this feature:

BLAST of MC01g0310 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g0310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156242.1	1.75e-44	100.00	uncharacterized protein LOC111023174 [Momordica charantia]	[more]
KAG6595503.1	1.19e-25	67.05	hypothetical protein SDJN03_12056, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038882347.1	3.69e-25	63.04	uncharacterized protein LOC120073608 [Benincasa hispida]	[more]
KAE8649374.1	2.58e-24	65.12	hypothetical protein Csa_021566 [Cucumis sativus]	[more]
XP_008441985.1	2.40e-23	57.89	PREDICTED: uncharacterized protein LOC103485982 [Cucumis melo] >KAA0060106.1 unc...	[more]

BLAST of MC01g0310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DRJ4	8.49e-45	100.00	uncharacterized protein LOC111023174 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A0A0KWN3	4.98e-26	65.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192100 PE=4 SV=1	[more]
A0A5A7V0V1	1.16e-23	57.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B5E4	1.16e-23	57.89	uncharacterized protein LOC103485982 OS=Cucumis melo OX=3656 GN=LOC103485982 PE=...	[more]
A0A6A6KHE5	1.27e-22	64.94	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_004873 PE=4 SV=1	[more]

BLAST of MC01g0310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18150.1	1.7e-16	58.90	Methyltransferase-related protein	[more]
AT5G14602.1	3.2e-15	54.17	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G58375.1	1.8e-10	45.45	Methyltransferase-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..49
None	No IPR available	PANTHER	PTHR34132:SF2	EMB\|CAB87627.1-RELATED	coord: 1..73
None	No IPR available	PANTHER	PTHR34132	EMB\|CAB87627.1-RELATED	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0310.1	MC01g0310.1	mRNA