MC01g0306 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0306
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ethylene-responsive transcription factor RAP2-11-like
Location	MC01: 9817892 .. 9818587 (+)
RNA-Seq Expression	MC01g0306
Synteny	MC01g0306

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATCCACTTCCAGCCGCCGGAGACGAACGGCGGCAAGCCCAGCAAATTCCGGGGCAGAAGCAGAGGAAACAACGGCCATAAATTCGTCGGCGTCCGGCAGCGGCCGTCGGGGCGGTGGGTGGCGGAGATCAAAGACACGACGAAGAAAATCCGAATGTGGCTGGGAACTTTCGAGACCGCCGAGGAGGCGGCGCGTGCGTACGACGAAGCCGCATGCCTCCTCCGCGGCTCCAATACTCGCACCAATTTCATCCCCCAAATCTCCACAAATTCCCCAATCGCCTCCCGAATCCGCTCTCTCCTCAACACCAAAAAACCCCCAAAAACCCTAGAAATCGCCGCCCCCTCCGTTTCCGTTTCTTCTCCGGCGATTCCGGACGCCCGGCTGTTCGACGGCGCCTACAAGCCCGACATGAGCAGTTTCCGGCGAGAAACGGAAACGGAAACAGAAACAGAAACCGAGAGGGGTTCTCGTTCTGATTCTGATTGCTGTTCTGGAATTGGGATTTCGGGGTTTCCGGCGACGGATTCGGAGGATTTGGAATTGTGTGCTTTCGAGAGGATGAAAGTGGAGAGGCAGATTTCGGCTTCCTTGTACGCCATTAATGGAGTTCAGGAGTACATGGAGGCTGTTCATGAGCCATCTTCGGAGGCCATTTGGGATCTTCCACCACTCTGTTCCTTGTTCTGT

mRNA sequence

ATGGAAATCCACTTCCAGCCGCCGGAGACGAACGGCGGCAAGCCCAGCAAATTCCGGGGCAGAAGCAGAGGAAACAACGGCCATAAATTCGTCGGCGTCCGGCAGCGGCCGTCGGGGCGGTGGGTGGCGGAGATCAAAGACACGACGAAGAAAATCCGAATGTGGCTGGGAACTTTCGAGACCGCCGAGGAGGCGGCGCGTGCGTACGACGAAGCCGCATGCCTCCTCCGCGGCTCCAATACTCGCACCAATTTCATCCCCCAAATCTCCACAAATTCCCCAATCGCCTCCCGAATCCGCTCTCTCCTCAACACCAAAAAACCCCCAAAAACCCTAGAAATCGCCGCCCCCTCCGTTTCCGTTTCTTCTCCGGCGATTCCGGACGCCCGGCTGTTCGACGGCGCCTACAAGCCCGACATGAGCAGTTTCCGGCGAGAAACGGAAACGGAAACAGAAACAGAAACCGAGAGGGGTTCTCGTTCTGATTCTGATTGCTGTTCTGGAATTGGGATTTCGGGGTTTCCGGCGACGGATTCGGAGGATTTGGAATTGTGTGCTTTCGAGAGGATGAAAGTGGAGAGGCAGATTTCGGCTTCCTTGTACGCCATTAATGGAGTTCAGGAGTACATGGAGGCTGTTCATGAGCCATCTTCGGAGGCCATTTGGGATCTTCCACCACTCTGTTCCTTGTTCTGT

Coding sequence (CDS)

ATGGAAATCCACTTCCAGCCGCCGGAGACGAACGGCGGCAAGCCCAGCAAATTCCGGGGCAGAAGCAGAGGAAACAACGGCCATAAATTCGTCGGCGTCCGGCAGCGGCCGTCGGGGCGGTGGGTGGCGGAGATCAAAGACACGACGAAGAAAATCCGAATGTGGCTGGGAACTTTCGAGACCGCCGAGGAGGCGGCGCGTGCGTACGACGAAGCCGCATGCCTCCTCCGCGGCTCCAATACTCGCACCAATTTCATCCCCCAAATCTCCACAAATTCCCCAATCGCCTCCCGAATCCGCTCTCTCCTCAACACCAAAAAACCCCCAAAAACCCTAGAAATCGCCGCCCCCTCCGTTTCCGTTTCTTCTCCGGCGATTCCGGACGCCCGGCTGTTCGACGGCGCCTACAAGCCCGACATGAGCAGTTTCCGGCGAGAAACGGAAACGGAAACAGAAACAGAAACCGAGAGGGGTTCTCGTTCTGATTCTGATTGCTGTTCTGGAATTGGGATTTCGGGGTTTCCGGCGACGGATTCGGAGGATTTGGAATTGTGTGCTTTCGAGAGGATGAAAGTGGAGAGGCAGATTTCGGCTTCCTTGTACGCCATTAATGGAGTTCAGGAGTACATGGAGGCTGTTCATGAGCCATCTTCGGAGGCCATTTGGGATCTTCCACCACTCTGTTCCTTGTTCTGT

Protein sequence

MEIHFQPPETNGGKPSKFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPKTLEIAAPSVSVSSPAIPDARLFDGAYKPDMSSFRRETETETETETERGSRSDSDCCSGIGISGFPATDSEDLELCAFERMKVERQISASLYAINGVQEYMEAVHEPSSEAIWDLPPLCSLFC

Homology

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BLAST of MC01g0306 vs. ExPASy Swiss-Prot
Match: A0A1X9PY88 (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.5e-63
Identity = 147/270 (54.44%), Postives = 175/270 (64.81%), Query Frame = 0


Query: 1   MEIHFQPP-----ETNGGKPSKFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRMW 60
           MEI FQ P     +  G K  KF+GR+R +N +KFVGVRQRPSGRWVAEIKDTT+KIRMW
Sbjct: 1   MEIQFQQPNLQQHQKAGTKGGKFKGRNRNSNTNKFVGVRQRPSGRWVAEIKDTTQKIRMW 60

Query: 61  LGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPK----- 120
           LGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR+LLN KK  K     
Sbjct: 61  LGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNKKGNKKQEGV 120

Query: 121 -----TLEIAAPSV------------------SVSSPAIPDARLFDGAYKPDMSSFRRET 180
                 +++ APS                   S+SS  + +  LFD AYKPD+S+ + + 
Sbjct: 121 VDVGVDVDVPAPSASTTSTSSNTSNSDKNDHNSLSSGKVQNTMLFDDAYKPDLSNCKEDF 180

Query: 181 ET-ETETETERGSRSDSDCCSGIGISGFPAT----DSEDLELCAFERMKVERQISASLYA 233
           ++   ++    G     D      I   P T    D+  LEL  FERMKVERQISASLYA
Sbjct: 181 QSCPPQSNFSWGFGPVFDRFPIAQILDMPKTDGMIDAASLELSEFERMKVERQISASLYA 240

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BLAST of MC01g0306 vs. ExPASy Swiss-Prot
Match: A2Q5W1 (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.2e-63
Identity = 151/277 (54.51%), Postives = 174/277 (62.82%), Query Frame = 0


Query: 1   MEIHFQPPETNG--------GKPSKFRGRSR-GNNGHKFVGVRQRPSGRWVAEIKDTTKK 60
           MEI FQ P             K  KF+GR+R  NN +KFVGVRQRPSGRWVAEIKDTT+K
Sbjct: 1   MEIQFQQPNMQNQKAGISVTNKGGKFKGRNRNSNNTNKFVGVRQRPSGRWVAEIKDTTQK 60

Query: 61  IRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPKT 120
           IRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR+LLN +K  K 
Sbjct: 61  IRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGDKK 120

Query: 121 LE----IAAPSVS--------------------VSSPAIPDARLFDGAYKPDMSSFRRET 180
            E     +APS S                    +S+ A  +  LF+ AYKPD+S+ +   
Sbjct: 121 QEDGAVASAPSNSKTTISNTSTITSNDDNKESTLSTCATRNTELFEDAYKPDLSNCKEVF 180

Query: 181 ETETETETERGSRSDSDCCSGIGISGF------------PATDSEDLELCAFERMKVERQ 233
           E+        GS+S+  C  G     F              TD+  LEL  FERMKVERQ
Sbjct: 181 ES--------GSQSNISCGFGPFFDHFSFTQLLDMAKNDDITDASSLELSEFERMKVERQ 240

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BLAST of MC01g0306 vs. ExPASy Swiss-Prot
Match: A9Y0K8 (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 5.9e-41
Identity = 126/318 (39.62%), Postives = 159/318 (50.00%), Query Frame = 0


Query: 1   MEIHFQPPETN--GGKPSKFRGRS-RGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRMWLG 60
           MEI F  P+ +    K +KF+GR+ +     KFVGVRQRPSGR+VAEIKDTT+ IRMWLG
Sbjct: 1   MEIQFDEPKKSLRPKKVNKFKGRNKKSETRDKFVGVRQRPSGRYVAEIKDTTQNIRMWLG 60

Query: 61  TFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPKTLE---- 120
           TFETAEEAARAYDEAA LLRGS TRTNF+  +S +SP+ASRIR LLN +K     +    
Sbjct: 61  TFETAEEAARAYDEAATLLRGSKTRTNFVTHVSYDSPLASRIRHLLNNRKKGTKQQDMNG 120

Query: 121 -------------------------------------------------------IAAPS 180
                                                                  +A+ S
Sbjct: 121 ISSTTSHADTTNDTTSDGSTSSTTNCIGTASGAINSTSASGVTSTSTNISTSASGVASTS 180

Query: 181 VSV------------------SSPAIPDARLFDGAYKPDMSSFRRETET---ETETETER 229
             +                  SS  +    LF+ AY+PDMS+   E E+   ++    + 
Sbjct: 181 TDISTNSSNTNVNDKSESLLSSSTTMQKPNLFEDAYRPDMSNLTNEYESSSYKSNVSWDF 240

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BLAST of MC01g0306 vs. ExPASy Swiss-Prot
Match: Q6J9S1 (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-35
Identity = 111/252 (44.05%), Postives = 138/252 (54.76%), Query Frame = 0


Query: 17  KFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLL 76
           K + +S+GN   KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACLL
Sbjct: 10  KTKEKSKGNK-TKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLL 69

Query: 77  RGSNTRTNFIPQISTNSPIASRIRSLLNTK-----------KPPKTL------------E 136
           RGSNTRTNF      NS ++ +IR+LL+ K           KP  +L             
Sbjct: 70  RGSNTRTNFANHFPNNSQLSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYISTATS 129

Query: 137 IAAPSVSVSSPAIPDARLFDGAYKPDMSSFRRETETE-----TETETERGSRSDSDCCSG 196
           +   + + ++ AIP     +  Y+PD SS   + ETE            G          
Sbjct: 130 LTTTTTTTTTTAIP----LNNVYRPD-SSVIGQPETEGLQLPYSWPLVSGFNHQIPLAQA 189

Query: 197 IGISGFPATD--SEDLELCAFERMKVERQISASLYAINGVQEYME------AVHEPSSEA 233
            G +     D  S D  L   E   +ERQISASLYA+NG   Y +      A+ +P ++ 
Sbjct: 190 GGETHGHLNDHYSTDQHLGLAE---IERQISASLYAMNGANSYYDNMNAEYAIFDP-TDP 249

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BLAST of MC01g0306 vs. ExPASy Swiss-Prot
Match: A9Y0K9 (Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=ERN3 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-24
Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 26  NGHKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 85
           N  KFVGVRQR SG+W AEIKDT+K IRMWLGT++TAEEAARAYDEAA LLRG+NTRTNF
Sbjct: 21  NRSKFVGVRQRASGKWAAEIKDTSKNIRMWLGTYKTAEEAARAYDEAAFLLRGTNTRTNF 80

Query: 86  --IPQISTNSPIASRIRSLLNTK 107
                I TNSPI+ ++++LL+ K
Sbjct: 81  STTHSIPTNSPISLKLKNLLHRK 103

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BLAST of MC01g0306 vs. NCBI nr
Match: XP_038883288.1 (ethylene-responsive transcription factor ERN1-like [Benincasa hispida])

HSP 1 Score: 310 bits (795), Expect = 6.31e-104
Identity = 177/253 (69.96%), Postives = 190/253 (75.10%), Query Frame = 0


Query: 1   MEIHFQPPETNGG------KPSKFRGRSRGNN-GHKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ PET+GG      K SKF+GRSRGNN G+KFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPETHGGAAVSVIKTSKFKGRSRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKK------ 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKK      
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKS 120

Query: 121 ---PPKTLEIAAPSVSVSSPAIPDARLFDGAYKPDMSSFRRETETETETETERGSRSDSD 180
              P  T   AA + +V+ P+I D  LFDGAYKPDM++   E E             DS 
Sbjct: 121 LENPTTTSAAAAATSAVADPSIQDDGLFDGAYKPDMTNCLEEREV---------GYCDSS 180

Query: 181 CCSGIGISGFP-----ATDSEDLELCAFERMKVERQISASLYAINGVQEYMEAVHEPSSE 232
           C    G+ G P       +SE+LELCAFERMKVERQISASLYAINGVQEYMEAVHE +SE
Sbjct: 181 CSVSCGL-GVPLPENVTANSEELELCAFERMKVERQISASLYAINGVQEYMEAVHE-ASE 240

[Close]

BLAST of MC01g0306 vs. NCBI nr
Match: XP_023518070.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo] >XP_023521910.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307 bits (787), Expect = 1.92e-102
Identity = 175/261 (67.05%), Postives = 195/261 (74.71%), Query Frame = 0


Query: 1   MEIHFQPPETNGG------KPSKFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEIHFQ P T+GG      K SKF+GR+RGNN +KFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPKTLEI 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLN++K P    +
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNPILNPL 120

Query: 121 AAPSVSVSS-PAIPDARLFDGAYKPDMSSFRRETETETETETERGSRSDSD---CCSGIG 180
              S + ++ P I D RLFDGAYKPDM++   ETE  ++  ++    SDS      SG+G
Sbjct: 121 KNHSAAAAAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGVG 180

Query: 181 -ISG---------FPAT---------DSEDLELCAFERMKVERQISASLYAINGVQEYME 232
            + G         FP            SEDLEL AFERMKVERQISASLYA+NGVQEYME
Sbjct: 181 FVDGLSMVQESMKFPVNAAAFQAEGEHSEDLELSAFERMKVERQISASLYAMNGVQEYME 240

[Close]

BLAST of MC01g0306 vs. NCBI nr
Match: XP_022925003.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata] >KAG6595498.1 Ethylene-responsive transcription factor ERN1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027484.1 Ethylene-responsive transcription factor RAP2-11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 306 bits (783), Expect = 7.79e-102
Identity = 171/261 (65.52%), Postives = 191/261 (73.18%), Query Frame = 0


Query: 1   MEIHFQPPETNGG------KPSKFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEIHFQ P T+GG      K SKF+GR+RGNN +KFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPKTLEI 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLN++K      +
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNPL 120

Query: 121 AA-PSVSVSSPAIPDARLFDGAYKPDMSSFRRETETETETETERGSRSDSDCCSGIGISG 180
              P+ +V++P I D RLFDGAYKPDM++   ETE  ++  ++    SDS         G
Sbjct: 121 KNHPAAAVAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGGG 180

Query: 181 F----------------------PATDSEDLELCAFERMKVERQISASLYAINGVQEYME 232
           F                       +  SEDLEL AFERMKVERQISASLYA+NGVQEYME
Sbjct: 181 FVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNGVQEYME 240

[Close]

BLAST of MC01g0306 vs. NCBI nr
Match: XP_023545037.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303 bits (776), Expect = 2.82e-101
Identity = 166/238 (69.75%), Postives = 186/238 (78.15%), Query Frame = 0


Query: 1   MEIHFQPPETNGG------KPSKFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEI+FQ PET+GG      K SKF+G++RGNNG+KFVGVRQRPSGRWVAEIKDTT+KIRM
Sbjct: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNF-IPQISTNSPIASRIRSLLNTKKPPKTLE 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNF IPQISTNSPIASRIR+LLN+KKP +   
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLENPP 120

Query: 121 IAAPSVSVSSPAIPDARLFDGAYKPDMSSFRRETETETETETERGSRSDSDCCSGIGISG 180
            AA S +V +P I D R+FDG YKPDM        T    +TE GS   SD C  +   G
Sbjct: 121 AAAASAAVPAPTIQDGRMFDGDYKPDM--------TNCSEKTEMGSCCSSDSCRFV--DG 180

Query: 181 FPATDSEDLELCAFERMKVERQISASLYAINGVQEYMEAVHEPSSEAIWDLPPLCSLF 231
           F   +SEDLELC FERMK ERQIS  LYA+NGV EYMEAVHE +SE+IWD+PPLCSLF
Sbjct: 181 F--WNSEDLELCDFERMKFERQISGCLYAMNGVHEYMEAVHE-ASESIWDIPPLCSLF 225

[Close]

BLAST of MC01g0306 vs. NCBI nr
Match: XP_022966432.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima])

HSP 1 Score: 301 bits (770), Expect = 9.02e-100
Identity = 173/267 (64.79%), Postives = 194/267 (72.66%), Query Frame = 0


Query: 1   MEIHFQPPETNGG------KPSKFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEIHFQ P  +GG      K SKF+GR+RG+N +KF+GVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPGIHGGATASLGKSSKFKGRTRGSNANKFLGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPKTLEI 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLN +K P    +
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNGRKNPILSPL 120

Query: 121 -------AAPSVSVSSPAIPDARLFDGAYKPDMSSFRRETETETETETERGSRSDSD--- 180
                  AA + + ++P I D RLFDGAYKPDM++   ETE  ++  ++    SDS    
Sbjct: 121 RNHPPAAAAAAAAAAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLG 180

Query: 181 CCSGIG-ISG---------FPAT---------DSEDLELCAFERMKVERQISASLYAING 232
             SG G + G         FP            SEDLEL AFERMKVERQISASLYA+NG
Sbjct: 181 ASSGAGFVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNG 240

[Close]

BLAST of MC01g0306 vs. ExPASy TrEMBL
Match: A0A6J1EE15 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3662 GN=LOC111432381 PE=4 SV=1)

HSP 1 Score: 306 bits (783), Expect = 3.77e-102
Identity = 171/261 (65.52%), Postives = 191/261 (73.18%), Query Frame = 0


Query: 1   MEIHFQPPETNGG------KPSKFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEIHFQ P T+GG      K SKF+GR+RGNN +KFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPKTLEI 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLN++K      +
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNPL 120

Query: 121 AA-PSVSVSSPAIPDARLFDGAYKPDMSSFRRETETETETETERGSRSDSDCCSGIGISG 180
              P+ +V++P I D RLFDGAYKPDM++   ETE  ++  ++    SDS         G
Sbjct: 121 KNHPAAAVAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGGG 180

Query: 181 F----------------------PATDSEDLELCAFERMKVERQISASLYAINGVQEYME 232
           F                       +  SEDLEL AFERMKVERQISASLYA+NGVQEYME
Sbjct: 181 FVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNGVQEYME 240

[Close]

BLAST of MC01g0306 vs. ExPASy TrEMBL
Match: A0A6J1HMY7 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=3661 GN=LOC111466085 PE=4 SV=1)

HSP 1 Score: 301 bits (770), Expect = 4.37e-100
Identity = 173/267 (64.79%), Postives = 194/267 (72.66%), Query Frame = 0


Query: 1   MEIHFQPPETNGG------KPSKFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEIHFQ P  +GG      K SKF+GR+RG+N +KF+GVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPGIHGGATASLGKSSKFKGRTRGSNANKFLGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPKTLEI 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLN +K P    +
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNGRKNPILSPL 120

Query: 121 -------AAPSVSVSSPAIPDARLFDGAYKPDMSSFRRETETETETETERGSRSDSD--- 180
                  AA + + ++P I D RLFDGAYKPDM++   ETE  ++  ++    SDS    
Sbjct: 121 RNHPPAAAAAAAAAAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLG 180

Query: 181 CCSGIG-ISG---------FPAT---------DSEDLELCAFERMKVERQISASLYAING 232
             SG G + G         FP            SEDLEL AFERMKVERQISASLYA+NG
Sbjct: 181 ASSGAGFVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNG 240

[Close]

BLAST of MC01g0306 vs. ExPASy TrEMBL
Match: A0A5A7UZM7 (Ethylene-responsive transcription factor RAP2-11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00240 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 2.24e-99
Identity = 169/253 (66.80%), Postives = 188/253 (74.31%), Query Frame = 0


Query: 1   MEIHFQPPETNGG-------KPSKFRGRSRGNN-GHKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEI FQ  E +GG       K +KF+GR+R NN G+KFVGVRQRPSGRWVAEIKDTTKKI
Sbjct: 1   MEIDFQSSEIHGGATASSIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPKTL 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKK     
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRK 120

Query: 121 EIAAPSVSVSS--------PAIPDARLFDGAYKPDMSSFRRETETETETETERGSRSDSD 180
            +  P+ SV++        P+I D  LF+GAYKPDM++   E E          S  DS 
Sbjct: 121 PLETPTTSVAASAGSAVVGPSIKDDGLFEGAYKPDMTNCLEEREV---------SSCDS- 180

Query: 181 CCS-----GIGISGFPATDSEDLELCAFERMKVERQISASLYAINGVQEYMEAVHEPSSE 232
           CCS     G+ ++      SE+LELCAFERMKVERQISASLYAINGVQEYMEAVHE ++E
Sbjct: 181 CCSESCELGVSLAENGTVSSEELELCAFERMKVERQISASLYAINGVQEYMEAVHE-ANE 240

[Close]

BLAST of MC01g0306 vs. ExPASy TrEMBL
Match: A0A1S3B5E8 (ethylene-responsive transcription factor RAP2-11-like OS=Cucumis melo OX=3656 GN=LOC103485987 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 2.24e-99
Identity = 169/253 (66.80%), Postives = 188/253 (74.31%), Query Frame = 0


Query: 1   MEIHFQPPETNGG-------KPSKFRGRSRGNN-GHKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEI FQ  E +GG       K +KF+GR+R NN G+KFVGVRQRPSGRWVAEIKDTTKKI
Sbjct: 1   MEIDFQSSEIHGGATASSIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPKTL 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKK     
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRK 120

Query: 121 EIAAPSVSVSS--------PAIPDARLFDGAYKPDMSSFRRETETETETETERGSRSDSD 180
            +  P+ SV++        P+I D  LF+GAYKPDM++   E E          S  DS 
Sbjct: 121 PLETPTTSVAASAGSAVVGPSIKDDGLFEGAYKPDMTNCLEEREV---------SSCDS- 180

Query: 181 CCS-----GIGISGFPATDSEDLELCAFERMKVERQISASLYAINGVQEYMEAVHEPSSE 232
           CCS     G+ ++      SE+LELCAFERMKVERQISASLYAINGVQEYMEAVHE ++E
Sbjct: 181 CCSESCELGVSLAENGTVSSEELELCAFERMKVERQISASLYAINGVQEYMEAVHE-ANE 240

[Close]

BLAST of MC01g0306 vs. ExPASy TrEMBL
Match: A0A6J1ISK7 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=3661 GN=LOC111478312 PE=4 SV=1)

HSP 1 Score: 296 bits (757), Expect = 1.03e-98
Identity = 167/241 (69.29%), Postives = 186/241 (77.18%), Query Frame = 0


Query: 1   MEIHFQPPETNGG------KPSKFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEIHFQ PET+GG      K SKF+G++RGNNG+KFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNF-IPQISTNSPIASRIRSLLNTKKPPKTLE 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNF IPQISTNSPIASRIR+LLN+KK   +LE
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKK---SLE 120

Query: 121 --IAAPSVSVSSPAIPDARLFDGAYKPDMSSFRRETETETETETERGSRSDSDCCSGIGI 180
              AA + +V +P I D R+ DG YKPDM        T    +TE GS   SD C  +  
Sbjct: 121 NPAAASAAAVPAPTIQDGRMLDGDYKPDM--------TNCSEKTEMGSCCSSDSCRFV-- 180

Query: 181 SGFPATDSEDLELCAFERMKVERQISASLYAINGVQEYMEAVHEPSSEAIWDLPPLCSLF 232
            GF   +S+DLE C FERMKVERQIS  LYA+NGV EYMEAVHE +SE+IWDLPPL SLF
Sbjct: 181 DGF--WNSDDLEFCDFERMKVERQISGCLYAMNGVHEYMEAVHE-ASESIWDLPPLGSLF 225

[Close]

BLAST of MC01g0306 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 )

HSP 1 Score: 151.4 bits (381), Expect = 9.1e-37
Identity = 111/252 (44.05%), Postives = 138/252 (54.76%), Query Frame = 0


Query: 17  KFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLL 76
           K + +S+GN   KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACLL
Sbjct: 10  KTKEKSKGNK-TKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLL 69

Query: 77  RGSNTRTNFIPQISTNSPIASRIRSLLNTK-----------KPPKTL------------E 136
           RGSNTRTNF      NS ++ +IR+LL+ K           KP  +L             
Sbjct: 70  RGSNTRTNFANHFPNNSQLSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYISTATS 129

Query: 137 IAAPSVSVSSPAIPDARLFDGAYKPDMSSFRRETETE-----TETETERGSRSDSDCCSG 196
           +   + + ++ AIP     +  Y+PD SS   + ETE            G          
Sbjct: 130 LTTTTTTTTTTAIP----LNNVYRPD-SSVIGQPETEGLQLPYSWPLVSGFNHQIPLAQA 189

Query: 197 IGISGFPATD--SEDLELCAFERMKVERQISASLYAINGVQEYME------AVHEPSSEA 233
            G +     D  S D  L   E   +ERQISASLYA+NG   Y +      A+ +P ++ 
Sbjct: 190 GGETHGHLNDHYSTDQHLGLAE---IERQISASLYAMNGANSYYDNMNAEYAIFDP-TDP 249

[Close]

BLAST of MC01g0306 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-16
Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 16  SKFRGRSRGNNGHKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACL 75
           SK + +     G +F+GVR+RP GR+ AEI+D T K R WLGTF+TAEEAA AYD AA  
Sbjct: 6   SKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARS 65

Query: 76  LRGSNTRTNFIPQISTNSPIASRIRSLLNTKKPPKTLEIAAP 118
           +RG+  RTNF   + ++ P +S + S+++   PP      AP
Sbjct: 66  MRGTRARTNF---VYSDMPPSSSVTSIVSPDDPPPPPPPPAP 104

[Close]

BLAST of MC01g0306 vs. TAIR 10
Match: AT4G11140.1 (cytokinin response factor 1 )

HSP 1 Score: 82.0 bits (201), Expect = 6.8e-16
Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 29  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIP 88
           KF GVRQRP G+W AEI+D ++++R+WLGTF+TAEEAA  YD AA  LRG N   NF P
Sbjct: 86  KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

[Close]

BLAST of MC01g0306 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 60/155 (38.71%), Postives = 85/155 (54.84%), Query Frame = 0


Query: 29  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQ 88
           KF GVRQR  G WVAEI+    K R+WLGTFETAEEAARAYDEAA L+ G N +TNF P 
Sbjct: 6   KFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNF-PL 65

Query: 89  ISTNSPIASRIRSLLNTKKPPKTLEIAAPSVSVSSPAIPDARLFDGAYKPDMSSFRRETE 148
            + N+   S  ++ ++      T+  +  S S+SS      R    +  P ++  R +T 
Sbjct: 66  NNNNTGETSEGKTDISAS---STMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTA 125

Query: 149 TE--TETETERGSRSDSDCCSGIGISGFPATDSED 182
           +      +   GS+SDS     + +   PA+ S++
Sbjct: 126 SSHIGVWQKRAGSKSDSSWVMTVELG--PASSSQE 154

[Close]

BLAST of MC01g0306 vs. TAIR 10
Match: AT1G43160.1 (related to AP2 6 )

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15
Identity = 47/110 (42.73%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 29  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQ 88
           K+ GVRQRP G+W AEI+D  K  R+WLGTFETAE AARAYD AA   RGS  + NF   
Sbjct: 60  KYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPEN 119

Query: 89  ISTNSPIASRIRSLLNTKKPPKTLEIAAPSVSVSSPAIPDARLFDGAYKP 139
           + T + I      L N+ +P  T     P++   S  +   +   G  +P
Sbjct: 120 VGTQT-IQRNSHFLQNSMQPSLTYIDQCPTLLSYSRCMEQQQPLVGMLQP 168

The following BLAST results are available for this feature:

BLAST of MC01g0306 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A1X9PY88	2.5e-63	54.44	Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN...	[more]
A2Q5W1	3.2e-63	54.51	Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=...	[more]
A9Y0K8	5.9e-41	39.62	Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=...	[more]
Q6J9S1	1.3e-35	44.05	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702...	[more]
A9Y0K9	1.3e-24	69.88	Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=...	[more]

BLAST of MC01g0306 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883288.1	6.31e-104	69.96	ethylene-responsive transcription factor ERN1-like [Benincasa hispida]	[more]
XP_023518070.1	1.92e-102	67.05	ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pep...	[more]
XP_022925003.1	7.79e-102	65.52	ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata] >KAG6...	[more]
XP_023545037.1	2.82e-101	69.75	ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pep...	[more]
XP_022966432.1	9.02e-100	64.79	ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima]	[more]

BLAST of MC01g0306 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EE15	3.77e-102	65.52	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1HMY7	4.37e-100	64.79	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=366...	[more]
A0A5A7UZM7	2.24e-99	66.80	Ethylene-responsive transcription factor RAP2-11-like OS=Cucumis melo var. makuw...	[more]
A0A1S3B5E8	2.24e-99	66.80	ethylene-responsive transcription factor RAP2-11-like OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1ISK7	1.03e-98	69.29	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=366...	[more]

BLAST of MC01g0306 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19790.1	9.1e-37	44.05	related to AP2 11	[more]
AT5G13910.1	1.8e-16	46.08	Integrase-type DNA-binding superfamily protein	[more]
AT4G11140.1	6.8e-16	62.71	cytokinin response factor 1	[more]
AT1G15360.1	1.2e-15	38.71	Integrase-type DNA-binding superfamily protein	[more]
AT1G43160.1	2.0e-15	42.73	related to AP2 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..41 score: 52.27 coord: 52..68 score: 70.05
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 29..92 e-value: 1.3E-35 score: 134.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 29..78 e-value: 4.1E-14 score: 52.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 29..86 score: 19.756702
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 29..85 e-value: 5.61967E-33 score: 111.98
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 28..87 e-value: 2.5E-23 score: 84.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR31194:SF1	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2	coord: 133..219 coord: 14..110
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 133..219 coord: 14..110
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 29..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0306.1	MC01g0306.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity