MC01g0249 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g0249
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC01: 9203927 .. 9204436 (-)
RNA-Seq ExpressionMC01g0249
SyntenyMC01g0249
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGCCTCAAACTCGCGAAAATTTGGCCCAAAATCCACTCTCCCGCTCCCCCTTCGCCGCCGATCTGGACACCGGCGACCGTCTCCCGGCACCACCGGCCGTCACCGCCGATTCCGACGACGTAGGCGTCGGAGATCCCGATTTGATTCGAGAACCTAAACGCCGGAAGCACTGCCCGATGGCGCTCGAGAACCTCGACGAGTTGACGTCGGCGTCGAATTCGAGCTTCGGCTTCACCTTCGACACGAAATTCTGCGGGTTCGCGGCGGCCGAGGTCACTCCGAAATTCGGATCGTTCAACTCGATCGCGCCGGAAATCGAGAGGAAGAAGAAAGAACAGAGCTCGGTTCTGGATTCGGCGAGCGAAGTGAGAGGAGACGAAGAAGACAAAGGAGAAGCCGTACAGCAAGAAGAAGATGAAGAGGAAGAAGAAGAAATCGAAGCCGGCGACGCGTTGCGGGAAGCAATTGGAGAAGGAGGAGGAAATCTGGAATCAGTAGCGGAT

mRNA sequence

ATGGCGGAGCCTCAAACTCGCGAAAATTTGGCCCAAAATCCACTCTCCCGCTCCCCCTTCGCCGCCGATCTGGACACCGGCGACCGTCTCCCGGCACCACCGGCCGTCACCGCCGATTCCGACGACGTAGGCGTCGGAGATCCCGATTTGATTCGAGAACCTAAACGCCGGAAGCACTGCCCGATGGCGCTCGAGAACCTCGACGAGTTGACGTCGGCGTCGAATTCGAGCTTCGGCTTCACCTTCGACACGAAATTCTGCGGGTTCGCGGCGGCCGAGGTCACTCCGAAATTCGGATCGTTCAACTCGATCGCGCCGGAAATCGAGAGGAAGAAGAAAGAACAGAGCTCGGTTCTGGATTCGGCGAGCGAAGTGAGAGGAGACGAAGAAGACAAAGGAGAAGCCGTACAGCAAGAAGAAGATGAAGAGGAAGAAGAAGAAATCGAAGCCGGCGACGCGTTGCGGGAAGCAATTGGAGAAGGAGGAGGAAATCTGGAATCAGTAGCGGAT

Coding sequence (CDS)

ATGGCGGAGCCTCAAACTCGCGAAAATTTGGCCCAAAATCCACTCTCCCGCTCCCCCTTCGCCGCCGATCTGGACACCGGCGACCGTCTCCCGGCACCACCGGCCGTCACCGCCGATTCCGACGACGTAGGCGTCGGAGATCCCGATTTGATTCGAGAACCTAAACGCCGGAAGCACTGCCCGATGGCGCTCGAGAACCTCGACGAGTTGACGTCGGCGTCGAATTCGAGCTTCGGCTTCACCTTCGACACGAAATTCTGCGGGTTCGCGGCGGCCGAGGTCACTCCGAAATTCGGATCGTTCAACTCGATCGCGCCGGAAATCGAGAGGAAGAAGAAAGAACAGAGCTCGGTTCTGGATTCGGCGAGCGAAGTGAGAGGAGACGAAGAAGACAAAGGAGAAGCCGTACAGCAAGAAGAAGATGAAGAGGAAGAAGAAGAAATCGAAGCCGGCGACGCGTTGCGGGAAGCAATTGGAGAAGGAGGAGGAAATCTGGAATCAGTAGCGGAT

Protein sequence

MAEPQTRENLAQNPLSRSPFAADLDTGDRLPAPPAVTADSDDVGVGDPDLIREPKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKKEQSSVLDSASEVRGDEEDKGEAVQQEEDEEEEEEIEAGDALREAIGEGGGNLESVAD
Homology
BLAST of MC01g0249 vs. NCBI nr
Match: KAG6595438.1 (hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027436.1 hypothetical protein SDJN02_11449, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193 bits (490), Expect = 1.76e-59
Identity = 126/185 (68.11%), Postives = 139/185 (75.14%), Query Frame = 0

Query: 1   MAEPQTRENLAQNP----LSRSPF-AADLDTGDRLPAPPAVT------ADSDDVGVGDPD 60
           MAEPQTRE  AQNP    LSRS F AAD D  D   APPAV       +DS DV + DPD
Sbjct: 1   MAEPQTRETFAQNPSLSILSRSSFVAADSDPADHPLAPPAVAVTVTAASDSSDVAIEDPD 60

Query: 61  LIREPKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIE 120
           L+REPKRRKHCP ALENLDELTSASNSSF FTFDTKFCGF+A E+TPKFGSFNSIA E E
Sbjct: 61  LLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSA-EITPKFGSFNSIAHETE 120

Query: 121 ---RKKKEQSSVLDSASEVRGDEED-KGEAVQQEEDEEEEEEIEAGDALREAIGEGGGNL 170
              +KKKEQ SVLD AS VRGDEE+ K ++VQ+E+DE+E   I+  DAL EAIGEG   L
Sbjct: 121 TKKKKKKEQRSVLDLASGVRGDEEEEKLDSVQREQDEQE---IKVTDALLEAIGEGREGL 180

BLAST of MC01g0249 vs. NCBI nr
Match: KAG6604296.1 (hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034454.1 hypothetical protein SDJN02_04183, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 190 bits (482), Expect = 3.08e-58
Identity = 129/187 (68.98%), Postives = 145/187 (77.54%), Query Frame = 0

Query: 1   MAEPQTRENLAQNP----LSRSPF-AADLDTGDR--LPAPPAVTADSD--DVGVGDPDLI 60
           MAEPQTREN AQNP    LSRS F AAD D G+R  +P   AV+A +D  DVG+ DPDLI
Sbjct: 1   MAEPQTRENFAQNPSLSPLSRSSFSAADPDPGERSLVPTTLAVSAAADFSDVGIEDPDLI 60

Query: 61  REPKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIE-- 120
           REPKRRKHCP ALENLDELTSASNSSFGFTFDTKFCG  +AE+TPKFGSFNSI  E+E  
Sbjct: 61  REPKRRKHCPSALENLDELTSASNSSFGFTFDTKFCG-VSAEITPKFGSFNSIVSEMEST 120

Query: 121 -RKKKEQSSVLDSASEVRGDEEDKGEAV-----QQEEDEEEEEEIEAGDALREAIGEGGG 170
            ++KKEQ  VLDSAS+ RGDEE + E+V     ++EE+EEEEEE E  DAL EAI EGGG
Sbjct: 121 KKEKKEQRLVLDSASKTRGDEE-REESVNRGTEEEEEEEEEEEEKEVADALLEAI-EGGG 180

BLAST of MC01g0249 vs. NCBI nr
Match: KGN54677.1 (hypothetical protein Csa_012626 [Cucumis sativus])

HSP 1 Score: 158 bits (399), Expect = 5.06e-46
Identity = 106/167 (63.47%), Postives = 117/167 (70.06%), Query Frame = 0

Query: 1   MAEPQTRENLAQN----PLSRSPF---AADLDTGDRLPAPPAVTADSDDVGVGDPDLIRE 60
           MAEPQTRENLAQN    PLSRS F   A D D  D   +PPAV        + DPDLIRE
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPAAVDPDPVDPPLSPPAVAV------LEDPDLIRE 60

Query: 61  PKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKK 120
           PKRRKHCP ALENLDELTSASNSSF FTFDTKFCGF+A E+TPKFGSFNSIAPE+ER +K
Sbjct: 61  PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSA-EITPKFGSFNSIAPEMERNQK 120

Query: 121 EQSSVLDSASEVRGDEEDKGEAVQQEEDEEEEEEIEAGDALREAIGE 160
           +      +  EVR +EE+    V+    EEEEEEI   DAL EAI E
Sbjct: 121 K------AEREVRVEEEESVHKVE----EEEEEEIGIADALLEAINE 150

BLAST of MC01g0249 vs. NCBI nr
Match: KAA0025819.1 (uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa] >TYK09637.1 uncharacterized protein E5676_scaffold447G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (376), Expect = 6.98e-43
Identity = 89/126 (70.63%), Postives = 96/126 (76.19%), Query Frame = 0

Query: 1   MAEPQTRENLAQN----PLSRSPF---AADLDTGDRLPAPPAVTADSDDVGVGDPDLIRE 60
           MAEPQTRENLAQN    PLSRS F   A D D  D   +PPAV        + DPDLIRE
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPPAVDPDPVDPPLSPPAVAP------LQDPDLIRE 60

Query: 61  PKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIER-KK 118
           PKRRKHCP ALENLDELTSASNSSF FTFDTKFCGF+A E+TPKFGSFNSIAPE+ER +K
Sbjct: 61  PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSA-EITPKFGSFNSIAPEMERNQK 119

BLAST of MC01g0249 vs. NCBI nr
Match: KAG5583307.1 (hypothetical protein H5410_053934 [Solanum commersonii])

HSP 1 Score: 89.7 bits (221), Expect = 3.37e-19
Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 0

Query: 1   MAEPQTRENLAQNPLSRSPFAADLDTGDRLPAPPAVTAD--SDDVGVGDPDLIREPKRRK 60
           M  P++ +  A+N     P  ++ ++GD  P+PP  TA+   +   + DPD++R+PKRRK
Sbjct: 1   MENPKSDQAPAEN--CSDPVPSNSNSGDD-PSPPT-TAEIWEEKPEIEDPDILRQPKRRK 60

Query: 61  HCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKKEQSSV 120
           +CP AL+  D L S SN  F F+FD+KF G +  EVTPKFGSFN + P   +  K + +V
Sbjct: 61  NCPSALDKFDSLNSGSNFGFSFSFDSKFSGCSTPEVTPKFGSFNRVKPGSTKDPKSEETV 120

Query: 121 LDSASE 124
           L+   E
Sbjct: 121 LEEEDE 122

BLAST of MC01g0249 vs. ExPASy TrEMBL
Match: A0A0A0L245 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420180 PE=4 SV=1)

HSP 1 Score: 158 bits (399), Expect = 2.45e-46
Identity = 106/167 (63.47%), Postives = 117/167 (70.06%), Query Frame = 0

Query: 1   MAEPQTRENLAQN----PLSRSPF---AADLDTGDRLPAPPAVTADSDDVGVGDPDLIRE 60
           MAEPQTRENLAQN    PLSRS F   A D D  D   +PPAV        + DPDLIRE
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPAAVDPDPVDPPLSPPAVAV------LEDPDLIRE 60

Query: 61  PKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKK 120
           PKRRKHCP ALENLDELTSASNSSF FTFDTKFCGF+A E+TPKFGSFNSIAPE+ER +K
Sbjct: 61  PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSA-EITPKFGSFNSIAPEMERNQK 120

Query: 121 EQSSVLDSASEVRGDEEDKGEAVQQEEDEEEEEEIEAGDALREAIGE 160
           +      +  EVR +EE+    V+    EEEEEEI   DAL EAI E
Sbjct: 121 K------AEREVRVEEEESVHKVE----EEEEEEIGIADALLEAINE 150

BLAST of MC01g0249 vs. ExPASy TrEMBL
Match: A0A5D3CCB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00340 PE=4 SV=1)

HSP 1 Score: 149 bits (376), Expect = 3.38e-43
Identity = 89/126 (70.63%), Postives = 96/126 (76.19%), Query Frame = 0

Query: 1   MAEPQTRENLAQN----PLSRSPF---AADLDTGDRLPAPPAVTADSDDVGVGDPDLIRE 60
           MAEPQTRENLAQN    PLSRS F   A D D  D   +PPAV        + DPDLIRE
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPPAVDPDPVDPPLSPPAVAP------LQDPDLIRE 60

Query: 61  PKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIER-KK 118
           PKRRKHCP ALENLDELTSASNSSF FTFDTKFCGF+A E+TPKFGSFNSIAPE+ER +K
Sbjct: 61  PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSA-EITPKFGSFNSIAPEMERNQK 119

BLAST of MC01g0249 vs. ExPASy TrEMBL
Match: A0A0V0HAK9 (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.67e-19
Identity = 52/126 (41.27%), Postives = 78/126 (61.90%), Query Frame = 0

Query: 1   MAEPQTRENLAQNPLSRSPFAADLDTGDRLPAPPAVTADS--DDVGVGDPDLIREPKRRK 60
           M  P++ +  A+N     P  ++ ++GD  P+PP  TA+S  +   + DPD++R+PKRRK
Sbjct: 1   MENPKSDQAPAEN--CSDPAPSNSNSGDD-PSPPT-TAESWEEKPEIEDPDILRQPKRRK 60

Query: 61  HCPMALENLDELTSASNSSFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKKEQSSV 120
           +CP AL+  D + S SN  F F+FD+KF G +  EVTPKFGSFN + P   +  K + +V
Sbjct: 61  NCPSALDKFDSVNSGSNFGFSFSFDSKFSGCSTPEVTPKFGSFNRVKPGSTKDPKSEETV 120

Query: 121 LDSASE 124
           L+   E
Sbjct: 121 LEEEDE 122

BLAST of MC01g0249 vs. ExPASy TrEMBL
Match: M1CPV9 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.85e-18
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 0

Query: 34  PAVTADS--DDVGVGDPDLIREPKRRKHCPMALENLDELTSASNSSFGFTFDTKFCGFAA 93
           P+ TA+S  +   + DPD++R+PKRRK+CP AL+  D + S SN  F F+FD+KF G + 
Sbjct: 30  PSTTAESWEEKPEIEDPDILRQPKRRKNCPSALDKFDSVNSGSNFGFSFSFDSKFSGCST 89

Query: 94  AEVTPKFGSFNSIAPEIERKKKEQSSVLDSASE 124
            EVTPKFGSFN + P   +  K + +VL+   E
Sbjct: 90  PEVTPKFGSFNRVKPGSTKDPKSEETVLEEEDE 122

BLAST of MC01g0249 vs. ExPASy TrEMBL
Match: A0A3Q7JFM8 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101250353 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.36e-18
Identity = 53/120 (44.17%), Postives = 76/120 (63.33%), Query Frame = 0

Query: 19  PFAADLDTGDRLPAPPAVTADS--DDVGVGDPDLIREPKRRKHCPMALENLDELTSASNS 78
           P  ++ ++GD  P+PP  TA+S  +   + DPD+IR+ KRRK+CP AL+  D + S SN 
Sbjct: 17  PAPSNSNSGDD-PSPPT-TAESWEEKPEIEDPDIIRQAKRRKNCPSALDKFDSVNSGSNF 76

Query: 79  SFGFTFDTKFCGFAAAEVTPKFGSFNSIAPEIERKKKEQSSVLDSASEVRGDEEDKGEAV 136
            F F+FD+KF G +  EVTPKFGSFN + P   +  K + +VL+   E   DEE+K + V
Sbjct: 77  GFSFSFDSKFSGCSTPEVTPKFGSFNRVKPGSTKDPKSEETVLEVEDE---DEEEKPDVV 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6595438.11.76e-5968.11hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6604296.13.08e-5868.98hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN54677.15.06e-4663.47hypothetical protein Csa_012626 [Cucumis sativus][more]
KAA0025819.16.98e-4370.63uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa] >TYK09... [more]
KAG5583307.13.37e-1941.27hypothetical protein H5410_053934 [Solanum commersonii][more]
Match NameE-valueIdentityDescription
A0A0A0L2452.45e-4663.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420180 PE=4 SV=1[more]
A0A5D3CCB23.38e-4370.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0V0HAK91.67e-1941.27Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1[more]
M1CPV91.85e-1846.24Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1[more]
A0A3Q7JFM82.36e-1844.17Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101250353 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g0249.1MC01g0249.1mRNA