MC01g0228 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0228
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Adenylate kinase
Location	MC01: 8845077 .. 8845199 (+)
RNA-Seq Expression	MC01g0228
Synteny	MC01g0228

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACATCGAACCCGACCTATGACTGCACTTCTTGTATTTACTGGTCTCAATGTTGTGCTGGTATCAACCATCACTCCAGTCTATGATTTTGTATGCTTTCATCCATATTGGGAAAGAAGG

mRNA sequence

ATGCCACATCGAACCCGACCTATGACTGCACTTCTTGTATTTACTGGTCTCAATGTTGTGCTGGTATCAACCATCACTCCAGTCTATGATTTTGTATGCTTTCATCCATATTGGGAAAGAAGG

Coding sequence (CDS)

ATGCCACATCGAACCCGACCTATGACTGCACTTCTTGTATTTACTGGTCTCAATGTTGTGCTGGTATCAACCATCACTCCAGTCTATGATTTTGTATGCTTTCATCCATATTGGGAAAGAAGG

Protein sequence

MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR

Homology

[Close]

BLAST of MC01g0228 vs. NCBI nr
Match: XP_022966645.1 (uncharacterized protein LOC111466268 [Cucurbita maxima] >XP_022966646.1 uncharacterized protein LOC111466268 [Cucurbita maxima])

HSP 1 Score: 89.4 bits (220), Expect = 3.03e-22
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of MC01g0228 vs. NCBI nr
Match: XP_022931821.1 (uncharacterized protein LOC111438118 [Cucurbita moschata] >XP_022931822.1 uncharacterized protein LOC111438118 [Cucurbita moschata] >XP_023517396.1 uncharacterized protein LOC111781173 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 89.4 bits (220), Expect = 3.03e-22
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of MC01g0228 vs. NCBI nr
Match: XP_022153946.1 (uncharacterized protein LOC111021335 [Momordica charantia])

HSP 1 Score: 89.4 bits (220), Expect = 3.10e-22
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of MC01g0228 vs. NCBI nr
Match: XP_028766636.1 (uncharacterized protein LOC114724455 [Prosopis alba] >XP_028766637.1 uncharacterized protein LOC114724455 [Prosopis alba])

HSP 1 Score: 89.4 bits (220), Expect = 3.34e-22
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of MC01g0228 vs. NCBI nr
Match: XP_031740521.1 (uncharacterized protein LOC101220293 [Cucumis sativus] >XP_031740522.1 uncharacterized protein LOC101220293 [Cucumis sativus] >KAE8649679.1 hypothetical protein Csa_012121 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 3.43e-22
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of MC01g0228 vs. ExPASy TrEMBL
Match: A0A6J1HS71 (uncharacterized protein LOC111466268 OS=Cucurbita maxima OX=3661 GN=LOC111466268 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.46e-22
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of MC01g0228 vs. ExPASy TrEMBL
Match: A0A6J1EUP9 (uncharacterized protein LOC111438118 OS=Cucurbita moschata OX=3662 GN=LOC111438118 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.46e-22
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of MC01g0228 vs. ExPASy TrEMBL
Match: A0A6J1DM83 (uncharacterized protein LOC111021335 OS=Momordica charantia OX=3673 GN=LOC111021335 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.50e-22
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of MC01g0228 vs. ExPASy TrEMBL
Match: A0A6P3YS46 (uncharacterized protein LOC107403960 OS=Ziziphus jujuba OX=326968 GN=LOC107403960 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.30e-22
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41
          MPHRTRPMTALLVFTGLNV+LVSTITPVYDFVCFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVILVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of MC01g0228 vs. ExPASy TrEMBL
Match: A0A1S3C1N0 (uncharacterized protein LOC103495817 OS=Cucumis melo OX=3656 GN=LOC103495817 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 9.62e-22
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41
          MPHRTRPM ALLVFTGLNVVLVSTITPVYDFVCFHPYWERR
Sbjct: 1  MPHRTRPMAALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]

BLAST of MC01g0228 vs. TAIR 10
Match: AT5G09225.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 6.6e-15
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 0


Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 42
          MPHRTRP+  LL+FTG+N VLV TITPVYDFVCF PYWERR
Sbjct: 1  MPHRTRPLKGLLLFTGINFVLVQTITPVYDFVCFLPYWERR 41

The following BLAST results are available for this feature:

BLAST of MC01g0228 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g0228 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966645.1	3.03e-22	100.00	uncharacterized protein LOC111466268 [Cucurbita maxima] >XP_022966646.1 uncharac...	[more]
XP_022931821.1	3.03e-22	100.00	uncharacterized protein LOC111438118 [Cucurbita moschata] >XP_022931822.1 unchar...	[more]
XP_022153946.1	3.10e-22	100.00	uncharacterized protein LOC111021335 [Momordica charantia]	[more]
XP_028766636.1	3.34e-22	100.00	uncharacterized protein LOC114724455 [Prosopis alba] >XP_028766637.1 uncharacter...	[more]
XP_031740521.1	3.43e-22	100.00	uncharacterized protein LOC101220293 [Cucumis sativus] >XP_031740522.1 uncharact...	[more]

BLAST of MC01g0228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HS71	1.46e-22	100.00	uncharacterized protein LOC111466268 OS=Cucurbita maxima OX=3661 GN=LOC111466268...	[more]
A0A6J1EUP9	1.46e-22	100.00	uncharacterized protein LOC111438118 OS=Cucurbita moschata OX=3662 GN=LOC1114381...	[more]
A0A6J1DM83	1.50e-22	100.00	uncharacterized protein LOC111021335 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6P3YS46	2.30e-22	97.56	uncharacterized protein LOC107403960 OS=Ziziphus jujuba OX=326968 GN=LOC10740396...	[more]
A0A1S3C1N0	9.62e-22	97.56	uncharacterized protein LOC103495817 OS=Cucumis melo OX=3656 GN=LOC103495817 PE=...	[more]

BLAST of MC01g0228 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09225.1	6.6e-15	80.49	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36392	TRANSMEMBRANE PROTEIN	coord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0228.1	MC01g0228.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane