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MC01g0227 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGGCGGCGCCGGCGCCGGCACCGGCAACCCAGTTCTCGGCGGCGTCCGCCGGCGGCAGCCCACAAAGAAAAAGAAGCCTCCGGCCATGAAAAAACCCATCAAAGTAGTGTACATATCAAACCCCATGAAGATCCAGACCAGTGCTTCTGAATTCATGGCCTTGGTCCAAGAACTCACCGGCCAAGACGCCGACTTTCCCGATCCATCTAAATTTCCGGCCGTCGTCGGTGGCTGCGACGGCAGCGGCGCCCTCCACAAGACTCCTGCCAACATTGGCGGCGTCGATGATGGCGATAATAATCTCCCTACACTTGCCGTGGAGCTCCCGGCGGAGGATGTTACGGCGGCTGCAGCGGTGGCGGTGGCAGCCGCCGCGGCTGGTGAGTGCTCAGATGAGAGTTTTTATGATGCATTTGATGACCTGTTTCTTCCTCCGGTGATCGGAAACTTCTCCGGGCTGCTTCCGACGGCGGCGGTGCTCTATGAATCTTATGCAAGG ATGGACGGCGGCGCCGGCGCCGGCACCGGCAACCCAGTTCTCGGCGGCGTCCGCCGGCGGCAGCCCACAAAGAAAAAGAAGCCTCCGGCCATGAAAAAACCCATCAAAGTAGTGTACATATCAAACCCCATGAAGATCCAGACCAGTGCTTCTGAATTCATGGCCTTGGTCCAAGAACTCACCGGCCAAGACGCCGACTTTCCCGATCCATCTAAATTTCCGGCCGTCGTCGGTGGCTGCGACGGCAGCGGCGCCCTCCACAAGACTCCTGCCAACATTGGCGGCGTCGATGATGGCGATAATAATCTCCCTACACTTGCCGTGGAGCTCCCGGCGGAGGATGTTACGGCGGCTGCAGCGGTGGCGGTGGCAGCCGCCGCGGCTGGTGAGTGCTCAGATGAGAGTTTTTATGATGCATTTGATGACCTGTTTCTTCCTCCGGTGATCGGAAACTTCTCCGGGCTGCTTCCGACGGCGGCGGTGCTCTATGAATCTTATGCAAGG ATGGACGGCGGCGCCGGCGCCGGCACCGGCAACCCAGTTCTCGGCGGCGTCCGCCGGCGGCAGCCCACAAAGAAAAAGAAGCCTCCGGCCATGAAAAAACCCATCAAAGTAGTGTACATATCAAACCCCATGAAGATCCAGACCAGTGCTTCTGAATTCATGGCCTTGGTCCAAGAACTCACCGGCCAAGACGCCGACTTTCCCGATCCATCTAAATTTCCGGCCGTCGTCGGTGGCTGCGACGGCAGCGGCGCCCTCCACAAGACTCCTGCCAACATTGGCGGCGTCGATGATGGCGATAATAATCTCCCTACACTTGCCGTGGAGCTCCCGGCGGAGGATGTTACGGCGGCTGCAGCGGTGGCGGTGGCAGCCGCCGCGGCTGGTGAGTGCTCAGATGAGAGTTTTTATGATGCATTTGATGACCTGTTTCTTCCTCCGGTGATCGGAAACTTCTCCGGGCTGCTTCCGACGGCGGCGGTGCTCTATGAATCTTATGCAAGG MDGGAGAGTGNPVLGGVRRRQPTKKKKPPAMKKPIKVVYISNPMKIQTSASEFMALVQELTGQDADFPDPSKFPAVVGGCDGSGALHKTPANIGGVDDGDNNLPTLAVELPAEDVTAAAAVAVAAAAAGECSDESFYDAFDDLFLPPVIGNFSGLLPTAAVLYESYAR Homology
BLAST of MC01g0227 vs. ExPASy Swiss-Prot
Match: Q9LDH1 (Sigma factor binding protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIB1 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.3e-09 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of MC01g0227 vs. ExPASy Swiss-Prot
Match: O80669 (Sigma factor binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIB2 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 0
BLAST of MC01g0227 vs. NCBI nr
Match: XP_038882812.1 (sigma factor binding protein 2, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 158 bits (400), Expect = 4.12e-46 Identity = 102/178 (57.30%), Postives = 115/178 (64.61%), Query Frame = 0
BLAST of MC01g0227 vs. NCBI nr
Match: XP_022966643.1 (uncharacterized protein LOC111466266 [Cucurbita maxima]) HSP 1 Score: 149 bits (377), Expect = 1.38e-42 Identity = 106/184 (57.61%), Postives = 117/184 (63.59%), Query Frame = 0
BLAST of MC01g0227 vs. NCBI nr
Match: XP_022931925.1 (sigma factor binding protein 1, chloroplastic-like [Cucurbita moschata] >KAG6595416.1 Sigma factor binding protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 147 bits (372), Expect = 7.67e-42 Identity = 104/182 (57.14%), Postives = 117/182 (64.29%), Query Frame = 0
BLAST of MC01g0227 vs. NCBI nr
Match: XP_022932879.1 (sigma factor binding protein 2, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 147 bits (371), Expect = 9.34e-42 Identity = 98/175 (56.00%), Postives = 110/175 (62.86%), Query Frame = 0
BLAST of MC01g0227 vs. NCBI nr
Match: XP_011653858.1 (sigma factor binding protein 2, chloroplastic [Cucumis sativus]) HSP 1 Score: 147 bits (371), Expect = 1.09e-41 Identity = 101/181 (55.80%), Postives = 113/181 (62.43%), Query Frame = 0
BLAST of MC01g0227 vs. ExPASy TrEMBL
Match: A0A6J1HSP6 (uncharacterized protein LOC111466266 OS=Cucurbita maxima OX=3661 GN=LOC111466266 PE=4 SV=1) HSP 1 Score: 149 bits (377), Expect = 6.69e-43 Identity = 106/184 (57.61%), Postives = 117/184 (63.59%), Query Frame = 0
BLAST of MC01g0227 vs. ExPASy TrEMBL
Match: A0A6J1F0S9 (sigma factor binding protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111438200 PE=4 SV=1) HSP 1 Score: 147 bits (372), Expect = 3.71e-42 Identity = 104/182 (57.14%), Postives = 117/182 (64.29%), Query Frame = 0
BLAST of MC01g0227 vs. ExPASy TrEMBL
Match: A0A6J1EY87 (sigma factor binding protein 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439409 PE=4 SV=1) HSP 1 Score: 147 bits (371), Expect = 4.52e-42 Identity = 98/175 (56.00%), Postives = 110/175 (62.86%), Query Frame = 0
BLAST of MC01g0227 vs. ExPASy TrEMBL
Match: A0A0A0L3J8 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G431960 PE=4 SV=1) HSP 1 Score: 147 bits (371), Expect = 5.26e-42 Identity = 101/181 (55.80%), Postives = 113/181 (62.43%), Query Frame = 0
BLAST of MC01g0227 vs. ExPASy TrEMBL
Match: A0A5A7SJV9 (Sigma factor binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002890 PE=4 SV=1) HSP 1 Score: 142 bits (357), Expect = 6.94e-40 Identity = 99/181 (54.70%), Postives = 111/181 (61.33%), Query Frame = 0
BLAST of MC01g0227 vs. TAIR 10
Match: AT3G56710.1 (sigma factor binding protein 1 ) HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of MC01g0227 vs. TAIR 10
Match: AT2G41180.1 (VQ motif-containing protein ) HSP 1 Score: 58.2 bits (139), Expect = 7.6e-09 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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