MC01g0219 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g0219
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC01: 8625093 .. 8625275 (+)
RNA-Seq ExpressionMC01g0219
SyntenyMC01g0219
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGACGAACACTTGCGGCAGCCTCGCCGGCCCCTTCCCGCCGAGCCTCGCCTCCAGCTCCTTCCTTAACGACGAGTCCATCGAAATGTCTCGCTCGTCCACCGGAACTCGGAATCCCCTGAAGATCGCTCGGACCATACAGCAATCCTCGTATGTCTTCCGGATTCCCCGGAGGCTGGTGAAG

mRNA sequence

CCGACGAACACTTGCGGCAGCCTCGCCGGCCCCTTCCCGCCGAGCCTCGCCTCCAGCTCCTTCCTTAACGACGAGTCCATCGAAATGTCTCGCTCGTCCACCGGAACTCGGAATCCCCTGAAGATCGCTCGGACCATACAGCAATCCTCGTATGTCTTCCGGATTCCCCGGAGGCTGGTGAAG

Coding sequence (CDS)

CCGACGAACACTTGCGGCAGCCTCGCCGGCCCCTTCCCGCCGAGCCTCGCCTCCAGCTCCTTCCTTAACGACGAGTCCATCGAAATGTCTCGCTCGTCCACCGGAACTCGGAATCCCCTGAAGATCGCTCGGACCATACAGCAATCCTCGTATGTCTTCCGGATTCCCCGGAGGCTGGTGAAG

Protein sequence

PTNTCGSLAGPFPPSLASSSFLNDESIEMSRSSTGTRNPLKIARTIQQSSYVFRIPRRLVK
Homology
[Close]
BLAST of MC01g0219 vs. NCBI nr
Match: KAF3789764.1 (hypothetical protein EJ110_NYTH14161 [Nymphaea thermarum])

HSP 1 Score: 55.8 bits (133), Expect = 4.08e-07
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 20  SFLNDESIEMSRSSTGTRNPLKIARTIQQSSYVFRIPRRLVK 61
           SF   ESIE SRSST TR+PL+I  T+QQSSYVF IPRRLVK
Sbjct: 169 SFRYAESIETSRSSTQTRSPLRIDLTVQQSSYVFLIPRRLVK 210

[Close]
BLAST of MC01g0219 vs. ExPASy TrEMBL
Match: A0A0A9DXE0 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 2.66e-04
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 3  NTCGSL-AGPFPPSLASSSFLNDESIEMSRSSTGTRNPLKIARTIQQSSYVFRIPR 57
          ++CGS  A P   S A SS  N  S++ SRSST TRNP ++ART +QS+ V R PR
Sbjct: 2  SSCGSAKARPREASRAWSSRRNAASMDTSRSSTATRNPRRMARTAEQSANVRRTPR 57

The following BLAST results are available for this feature:
BLAST of MC01g0219 vs.
Match NameE-valueIdentityDescription
BLAST of MC01g0219 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF3789764.14.08e-0773.81hypothetical protein EJ110_NYTH14161 [Nymphaea thermarum][more]
BLAST of MC01g0219 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A9DXE02.66e-0451.79Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
BLAST of MC01g0219 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g0219.1MC01g0219.1mRNA