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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CCGACGAACACTTGCGGCAGCCTCGCCGGCCCCTTCCCGCCGAGCCTCGCCTCCAGCTCCTTCCTTAACGACGAGTCCATCGAAATGTCTCGCTCGTCCACCGGAACTCGGAATCCCCTGAAGATCGCTCGGACCATACAGCAATCCTCGTATGTCTTCCGGATTCCCCGGAGGCTGGTGAAG mRNA sequence CCGACGAACACTTGCGGCAGCCTCGCCGGCCCCTTCCCGCCGAGCCTCGCCTCCAGCTCCTTCCTTAACGACGAGTCCATCGAAATGTCTCGCTCGTCCACCGGAACTCGGAATCCCCTGAAGATCGCTCGGACCATACAGCAATCCTCGTATGTCTTCCGGATTCCCCGGAGGCTGGTGAAG Coding sequence (CDS) CCGACGAACACTTGCGGCAGCCTCGCCGGCCCCTTCCCGCCGAGCCTCGCCTCCAGCTCCTTCCTTAACGACGAGTCCATCGAAATGTCTCGCTCGTCCACCGGAACTCGGAATCCCCTGAAGATCGCTCGGACCATACAGCAATCCTCGTATGTCTTCCGGATTCCCCGGAGGCTGGTGAAG Protein sequence PTNTCGSLAGPFPPSLASSSFLNDESIEMSRSSTGTRNPLKIARTIQQSSYVFRIPRRLVK
Homology
BLAST of MC01g0219 vs. NCBI nr
Match: KAF3789764.1 (hypothetical protein EJ110_NYTH14161 [Nymphaea thermarum]) HSP 1 Score: 55.8 bits (133), Expect = 4.08e-07 Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 0 Query: 20 SFLNDESIEMSRSSTGTRNPLKIARTIQQSSYVFRIPRRLVK 61 SF ESIE SRSST TR+PL+I T+QQSSYVF IPRRLVK Sbjct: 169 SFRYAESIETSRSSTQTRSPLRIDLTVQQSSYVFLIPRRLVK 210
BLAST of MC01g0219 vs. ExPASy TrEMBL
Match: A0A0A9DXE0 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 2.66e-04 Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 0 Query: 3 NTCGSL-AGPFPPSLASSSFLNDESIEMSRSSTGTRNPLKIARTIQQSSYVFRIPR 57 ++CGS A P S A SS N S++ SRSST TRNP ++ART +QS+ V R PR Sbjct: 2 SSCGSAKARPREASRAWSSRRNAASMDTSRSSTATRNPRRMARTAEQSANVRRTPR 57
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAF3789764.1 | 4.08e-07 | 73.81 | hypothetical protein EJ110_NYTH14161 [Nymphaea thermarum] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A9DXE0 | 2.66e-04 | 51.79 | Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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