MC01g0187 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0187
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Stress-response A/B barrel domain-containing protein
Location	MC01: 8091414 .. 8091620 (-)
RNA-Seq Expression	MC01g0187
Synteny	MC01g0187

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGGTAATTTCTAATATTAACTTTGTCAATTTCTTTGGGTGGGGACATGATGTGGAAGGTCAAGATATGTTAACACCAGGCTTCACACACGTCTTCTCAATGACATTTGATGACAAAGAAGGTATCAATTCGTCCTTCCCCATCCATTTTGAGTTCTGCCTCACCTTGAGTACAGCAATGTATAAGATTGTGGGGCTAGATTTT

mRNA sequence

AAGAAGGTAATTTCTAATATTAACTTTGTCAATTTCTTTGGGTGGGGACATGATGTGGAAGGTCAAGATATGTTAACACCAGGCTTCACACACGTCTTCTCAATGACATTTGATGACAAAGAAGGTATCAATTCGTCCTTCCCCATCCATTTTGAGTTCTGCCTCACCTTGAGTACAGCAATGTATAAGATTGTGGGGCTAGATTTT

Coding sequence (CDS)

AAGAAGGTAATTTCTAATATTAACTTTGTCAATTTCTTTGGGTGGGGACATGATGTGGAAGGTCAAGATATGTTAACACCAGGCTTCACACACGTCTTCTCAATGACATTTGATGACAAAGAAGGTATCAATTCGTCCTTCCCCATCCATTTTGAGTTCTGCCTCACCTTGAGTACAGCAATGTATAAGATTGTGGGGCTAGATTTT

Protein sequence

KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINSSFPIHFEFCLTLSTAMYKIVGLDF

Homology

[Close]

BLAST of MC01g0187 vs. ExPASy Swiss-Prot
Match: Q9FK81 (Stress-response A/B barrel domain-containing protein At5g22580 OS=Arabidopsis thaliana OX=3702 GN=At5g22580 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 5.5e-11
Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 1  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEG--INSSFPIHFEFCLTLS 60
          + ++S I+ V  F WG D E  DML  GFTH FSMTF++K+G    +S P+H EF    +
Sbjct: 28 ENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHVEFSAAFT 87

Query: 61 TAMYKIVGLDF 70
            + KIV LDF
Sbjct: 88 AVIDKIVLLDF 98

[Close]

BLAST of MC01g0187 vs. NCBI nr
Match: XP_008461858.1 (PREDICTED: stress-response A/B barrel domain-containing protein At5g22580-like [Cucumis melo])

HSP 1 Score: 97.4 bits (241), Expect = 7.93e-24
Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 1  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHFEFCLTLS 60
          +K++S+I+ V FF WGHDVEGQDMLT GFTHVFSMTFDDKE I S  + P H EFC T S
Sbjct: 26 EKMVSDIDSVKFFEWGHDVEGQDMLTQGFTHVFSMTFDDKEAITSFLTHPKHLEFCPTFS 85

Query: 61 TAMYKIVGLDF 69
           A+ +IV LDF
Sbjct: 86 AAIDQIVVLDF 96

[Close]

BLAST of MC01g0187 vs. NCBI nr
Match: KAA0040939.1 (stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa] >TYK20318.1 stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 3.75e-23
Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 1   KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHFEFCLTLS 60
           +K++S+I+ V FF WGHDVEGQDMLT GFTHVFSMTFDDKE I S  + P H EFC T S
Sbjct: 89  EKMVSDIDSVKFFEWGHDVEGQDMLTQGFTHVFSMTFDDKEAITSFLTHPKHLEFCPTFS 148

Query: 61  TAMYKIVGLDF 69
            A+ +IV LDF
Sbjct: 149 AAIDQIVVLDF 159

[Close]

BLAST of MC01g0187 vs. NCBI nr
Match: KAG7020786.1 (Stress-response A/B barrel domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 95.5 bits (236), Expect = 4.08e-23
Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 1  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHFEFCLTLS 60
          +K++S+I++V  F WGHDVEGQDM+T GFTHVFSMTFDDKE I S  + P H EFC T S
Sbjct: 26 EKMVSDIHYVKSFQWGHDVEGQDMVTQGFTHVFSMTFDDKEAIASFLTHPKHLEFCPTFS 85

Query: 61 TAMYKIVGLDF 69
           A+ KI+ LDF
Sbjct: 86 AAIDKIIVLDF 96

[Close]

BLAST of MC01g0187 vs. NCBI nr
Match: XP_022937510.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita moschata])

HSP 1 Score: 95.5 bits (236), Expect = 4.08e-23
Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 1  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHFEFCLTLS 60
          +K++S+I++V  F WGHDVEGQDM+T GFTHVFSMTFDDKE I S  + P H EFC T S
Sbjct: 26 EKMVSDIDYVKSFEWGHDVEGQDMVTQGFTHVFSMTFDDKEAIASFLTHPKHLEFCPTFS 85

Query: 61 TAMYKIVGLDF 69
           A+ KI+ LDF
Sbjct: 86 AAIDKIIVLDF 96

[Close]

BLAST of MC01g0187 vs. NCBI nr
Match: XP_022969554.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita maxima])

HSP 1 Score: 95.5 bits (236), Expect = 4.30e-23
Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 1  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHFEFCLTLS 60
          +K++S+I++V  F WGHDVEGQDM+T GFTHVFSMTFDDKE I S  + P H EFC T S
Sbjct: 26 EKMVSDIDYVKSFEWGHDVEGQDMVTQGFTHVFSMTFDDKEAIASFLTHPKHLEFCPTFS 85

Query: 61 TAMYKIVGLDF 69
           A+ KI+ LDF
Sbjct: 86 AAIDKIIVLDF 96

[Close]

BLAST of MC01g0187 vs. ExPASy TrEMBL
Match: A0A1S3CFK4 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucumis melo OX=3656 GN=LOC103500356 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.84e-24
Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 1  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHFEFCLTLS 60
          +K++S+I+ V FF WGHDVEGQDMLT GFTHVFSMTFDDKE I S  + P H EFC T S
Sbjct: 26 EKMVSDIDSVKFFEWGHDVEGQDMLTQGFTHVFSMTFDDKEAITSFLTHPKHLEFCPTFS 85

Query: 61 TAMYKIVGLDF 69
           A+ +IV LDF
Sbjct: 86 AAIDQIVVLDF 96

[Close]

BLAST of MC01g0187 vs. ExPASy TrEMBL
Match: A0A0A0LY53 (Stress-response A/B barrel domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G151000 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.55e-23
Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 1  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHFEFCLTLS 60
          +K++S+I+ V  F WGHDVEGQDMLT GFTHVFSMTFDDKE I S  + P H EFC T S
Sbjct: 26 EKMVSDIDSVKSFEWGHDVEGQDMLTQGFTHVFSMTFDDKEAITSFLTHPKHLEFCPTFS 85

Query: 61 TAMYKIVGLDF 69
           A+ KIV LDF
Sbjct: 86 AAIDKIVVLDF 96

[Close]

BLAST of MC01g0187 vs. ExPASy TrEMBL
Match: A0A5A7TI03 (Stress-response A/B barrel domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00480 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.81e-23
Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 1   KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHFEFCLTLS 60
           +K++S+I+ V FF WGHDVEGQDMLT GFTHVFSMTFDDKE I S  + P H EFC T S
Sbjct: 89  EKMVSDIDSVKFFEWGHDVEGQDMLTQGFTHVFSMTFDDKEAITSFLTHPKHLEFCPTFS 148

Query: 61  TAMYKIVGLDF 69
            A+ +IV LDF
Sbjct: 149 AAIDQIVVLDF 159

[Close]

BLAST of MC01g0187 vs. ExPASy TrEMBL
Match: A0A6J1FGY0 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucurbita moschata OX=3662 GN=LOC111443900 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.98e-23
Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 1  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHFEFCLTLS 60
          +K++S+I++V  F WGHDVEGQDM+T GFTHVFSMTFDDKE I S  + P H EFC T S
Sbjct: 26 EKMVSDIDYVKSFEWGHDVEGQDMVTQGFTHVFSMTFDDKEAIASFLTHPKHLEFCPTFS 85

Query: 61 TAMYKIVGLDF 69
           A+ KI+ LDF
Sbjct: 86 AAIDKIIVLDF 96

[Close]

BLAST of MC01g0187 vs. ExPASy TrEMBL
Match: A0A6J1I2Y7 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucurbita maxima OX=3661 GN=LOC111468537 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.08e-23
Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 1  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHFEFCLTLS 60
          +K++S+I++V  F WGHDVEGQDM+T GFTHVFSMTFDDKE I S  + P H EFC T S
Sbjct: 26 EKMVSDIDYVKSFEWGHDVEGQDMVTQGFTHVFSMTFDDKEAIASFLTHPKHLEFCPTFS 85

Query: 61 TAMYKIVGLDF 69
           A+ KI+ LDF
Sbjct: 86 AAIDKIIVLDF 96

[Close]

BLAST of MC01g0187 vs. TAIR 10
Match: AT5G22580.1 (Stress responsive A/B Barrel Domain )

HSP 1 Score: 67.8 bits (164), Expect = 3.9e-12
Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 1  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEG--INSSFPIHFEFCLTLS 60
          + ++S I+ V  F WG D E  DML  GFTH FSMTF++K+G    +S P+H EF    +
Sbjct: 28 ENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHVEFSAAFT 87

Query: 61 TAMYKIVGLDF 70
            + KIV LDF
Sbjct: 88 AVIDKIVLLDF 98

The following BLAST results are available for this feature:

BLAST of MC01g0187 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK81	5.5e-11	46.48	Stress-response A/B barrel domain-containing protein At5g22580 OS=Arabidopsis th...	[more]

BLAST of MC01g0187 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461858.1	7.93e-24	66.20	PREDICTED: stress-response A/B barrel domain-containing protein At5g22580-like [...	[more]
KAA0040939.1	3.75e-23	66.20	stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa] ...	[more]
KAG7020786.1	4.08e-23	63.38	Stress-response A/B barrel domain-containing protein [Cucurbita argyrosperma sub...	[more]
XP_022937510.1	4.08e-23	63.38	stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita m...	[more]
XP_022969554.1	4.30e-23	63.38	stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita m...	[more]

BLAST of MC01g0187 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CFK4	3.84e-24	66.20	stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucumis m...	[more]
A0A0A0LY53	1.55e-23	66.20	Stress-response A/B barrel domain-containing protein OS=Cucumis sativus OX=3659 ...	[more]
A0A5A7TI03	1.81e-23	66.20	Stress-response A/B barrel domain-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A6J1FGY0	1.98e-23	63.38	stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucurbita...	[more]
A0A6J1I2Y7	2.08e-23	63.38	stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucurbita...	[more]

BLAST of MC01g0187 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22580.1	3.9e-12	46.48	Stress responsive A/B Barrel Domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013097	Stress responsive alpha-beta barrel	PFAM	PF07876	Dabb	coord: 5..44 e-value: 1.2E-4 score: 22.7
None	No IPR available	PANTHER	PTHR33178:SF4	EXPRESSED PROTEIN	coord: 2..69
IPR044662	Stress-response A/B barrel domain-containing protein HS1/DABB1-like	PANTHER	PTHR33178	FAMILY NOT NAMED	coord: 2..69
IPR011008	Dimeric alpha-beta barrel	SUPERFAMILY	54909	Dimeric alpha+beta barrel	coord: 6..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0187.1	MC01g0187.1	mRNA