MC01g0178 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g0178
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC01: 7897340 .. 7897531 (+)
RNA-Seq ExpressionMC01g0178
SyntenyMC01g0178
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGTCAAGAAGTTTTGTACATTTTCCAATCTCATTAGGTATGTCTCCTTTAATTGAATTCTGTTCCAAAAGCAAGTACTGCAATCTTGATATATTGCAGATATCTGATGGAATAGTACCATTGAATCTATTGCTGCTTAAATCAAGCTTGTTAAGGTTCTTGCACCCGAGCATCGATCTCGGGATATCACCG

mRNA sequence

AGGTCAAGAAGTTTTGTACATTTTCCAATCTCATTAGGTATGTCTCCTTTAATTGAATTCTGTTCCAAAAGCAAGTACTGCAATCTTGATATATTGCAGATATCTGATGGAATAGTACCATTGAATCTATTGCTGCTTAAATCAAGCTTGTTAAGGTTCTTGCACCCGAGCATCGATCTCGGGATATCACCG

Coding sequence (CDS)

AGGTCAAGAAGTTTTGTACATTTTCCAATCTCATTAGGTATGTCTCCTTTAATTGAATTCTGTTCCAAAAGCAAGTACTGCAATCTTGATATATTGCAGATATCTGATGGAATAGTACCATTGAATCTATTGCTGCTTAAATCAAGCTTGTTAAGGTTCTTGCACCCGAGCATCGATCTCGGGATATCACCG

Protein sequence

RSRSFVHFPISLGMSPLIEFCSKSKYCNLDILQISDGIVPLNLLLLKSSLLRFLHPSIDLGISP
Homology
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BLAST of MC01g0178 vs. ExPASy TrEMBL
Match: A0A0A9P4S0 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.35e-05
Identity = 23/50 (46.00%), Postives = 30/50 (60.00%), Query Frame = 0 

Query: 4  SFVHFPISLGMSPLIEFCSKSKYCNLDILQISDGIVPLNLLLLKSSLLRF 53
          S+V FP   G+ P+ +FC K   C L +  IS GIVP+ LLL + S  RF
Sbjct: 14 SWVRFPKEEGIGPVRQFCPKCSICRLAMPPISTGIVPVKLLLRRDSCCRF 63

The following BLAST results are available for this feature:
BLAST of MC01g0178 vs.
Match NameE-valueIdentityDescription
BLAST of MC01g0178 vs.
Match NameE-valueIdentityDescription
BLAST of MC01g0178 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A9P4S05.35e-0546.00Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
BLAST of MC01g0178 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g0178.1MC01g0178.1mRNA