MC01g0176 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0176
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein of unknown function (DUF1138)
Location	MC01: 7893694 .. 7894015 (+)
RNA-Seq Expression	MC01g0176
Synteny	MC01g0176

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACAAAATACATTTTAGCTTCTGTAATTGGAGCTAGTGCAATTGCGTATGTTTCAGACTATCTTATTGCTGACAAGAAAATATTTGGAGGTAATTATCGGGGGTTATCGCAGTTTCTTTGGTGTGCTACCATTGCTCTACTGTCTCAATTTTTTTTTAATAATTTCTTGTTCAGGATCAACCCCGTCTACTGTTTCGAACAAGGAGTGGTTGGAAGAAACCGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCTGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATCGTCAAGACTCGCTCTGAA

mRNA sequence

ATGGCAACAAAATACATTTTAGCTTCTGTAATTGGAGCTAGTGCAATTGCGTATGTTTCAGACTATCTTATTGCTGACAAGAAAATATTTGGAGGATCAACCCCGTCTACTGTTTCGAACAAGGAGTGGTTGGAAGAAACCGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCTGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATCGTCAAGACTCGCTCTGAA

Coding sequence (CDS)

ATGGCAACAAAATACATTTTAGCTTCTGTAATTGGAGCTAGTGCAATTGCGTATGTTTCAGACTATCTTATTGCTGACAAGAAAATATTTGGAGGATCAACCCCGTCTACTGTTTCGAACAAGGAGTGGTTGGAAGAAACCGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCTGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATCGTCAAGACTCGCTCTGAA

Protein sequence

MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGPPVVMNPISRQNFIVKTRSE

Homology

[Close]

BLAST of MC01g0176 vs. NCBI nr
Match: XP_022152252.1 (uncharacterized protein LOC111020022 [Momordica charantia])

HSP 1 Score: 159 bits (402), Expect = 4.86e-49
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60
          MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP
Sbjct: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSE 79
          PVVMNPISRQNFIVKTRSE
Sbjct: 61 PVVMNPISRQNFIVKTRSE 79

[Close]

BLAST of MC01g0176 vs. NCBI nr
Match: XP_038883759.1 (uncharacterized protein LOC120074644 [Benincasa hispida] >XP_038883760.1 uncharacterized protein LOC120074644 [Benincasa hispida])

HSP 1 Score: 142 bits (357), Expect = 3.59e-42
Identity = 66/79 (83.54%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60
          MA KYI+ S++GA+A+AY+SD+LIADKKIFGG+TPSTVSN+EW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIVGSLLGATALAYISDHLIADKKIFGGTTPSTVSNREWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSE 79
          PVVMNPISRQNFIVK RSE
Sbjct: 61 PVVMNPISRQNFIVKARSE 79

[Close]

BLAST of MC01g0176 vs. NCBI nr
Match: XP_022966506.1 (uncharacterized protein LOC111466138 [Cucurbita maxima])

HSP 1 Score: 141 bits (355), Expect = 7.24e-42
Identity = 65/79 (82.28%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60
          MA KY+ AS++G  AIAY++DYL++DKKIFGG+TPSTVSN EW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSE 79
          PVVMNPISRQNFIVKTRSE
Sbjct: 61 PVVMNPISRQNFIVKTRSE 79

[Close]

BLAST of MC01g0176 vs. NCBI nr
Match: XP_022925267.1 (uncharacterized protein LOC111432556 [Cucurbita moschata] >KAG7027625.1 hypothetical protein SDJN02_11640 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139 bits (351), Expect = 2.95e-41
Identity = 64/79 (81.01%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60
          MA+KY+ AS++G  AIAY++DYL++DKKIFGG+TPSTVSN EW EETDKKFQAWPRTAGP
Sbjct: 1  MASKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSE 79
          PVVMNPISRQNFIVKTR E
Sbjct: 61 PVVMNPISRQNFIVKTRPE 79

[Close]

BLAST of MC01g0176 vs. NCBI nr
Match: XP_023517179.1 (uncharacterized protein LOC111781016 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139 bits (350), Expect = 4.19e-41
Identity = 64/79 (81.01%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60
          MA KY+ AS++G  AIAY++DYL++DKKIFGG+TPSTVSN EW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYVTASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSE 79
          PVVMNPISRQNFIVKTR E
Sbjct: 61 PVVMNPISRQNFIVKTRPE 79

[Close]

BLAST of MC01g0176 vs. ExPASy TrEMBL
Match: A0A6J1DFP1 (uncharacterized protein LOC111020022 OS=Momordica charantia OX=3673 GN=LOC111020022 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 2.35e-49
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60
          MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP
Sbjct: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSE 79
          PVVMNPISRQNFIVKTRSE
Sbjct: 61 PVVMNPISRQNFIVKTRSE 79

[Close]

BLAST of MC01g0176 vs. ExPASy TrEMBL
Match: A0A6J1HPI7 (uncharacterized protein LOC111466138 OS=Cucurbita maxima OX=3661 GN=LOC111466138 PE=4 SV=1)

HSP 1 Score: 141 bits (355), Expect = 3.51e-42
Identity = 65/79 (82.28%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60
          MA KY+ AS++G  AIAY++DYL++DKKIFGG+TPSTVSN EW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSE 79
          PVVMNPISRQNFIVKTRSE
Sbjct: 61 PVVMNPISRQNFIVKTRSE 79

[Close]

BLAST of MC01g0176 vs. ExPASy TrEMBL
Match: A0A6J1EBA8 (uncharacterized protein LOC111432556 OS=Cucurbita moschata OX=3662 GN=LOC111432556 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 1.43e-41
Identity = 64/79 (81.01%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60
          MA+KY+ AS++G  AIAY++DYL++DKKIFGG+TPSTVSN EW EETDKKFQAWPRTAGP
Sbjct: 1  MASKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSE 79
          PVVMNPISRQNFIVKTR E
Sbjct: 61 PVVMNPISRQNFIVKTRPE 79

[Close]

BLAST of MC01g0176 vs. ExPASy TrEMBL
Match: A0A0A0KYC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166930 PE=4 SV=1)

HSP 1 Score: 138 bits (348), Expect = 4.10e-41
Identity = 64/79 (81.01%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60
          MA KYI+ S++GA  +AY+ D+LI+DKKIFGG+TPSTVSN EWLEETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSE 79
          PVVMNPISRQNFIVKTR E
Sbjct: 61 PVVMNPISRQNFIVKTRPE 79

[Close]

BLAST of MC01g0176 vs. ExPASy TrEMBL
Match: A0A061EWV8 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024708 PE=4 SV=1)

HSP 1 Score: 138 bits (347), Expect = 5.83e-41
Identity = 67/79 (84.81%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 1  MATKYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGP 60
          MATKYI+ +V+G+ AIAYV D LIADKKIFGG+TPSTVSNKEW EETDKKFQAWPRTAGP
Sbjct: 1  MATKYIIPAVLGSFAIAYVCDQLIADKKIFGGTTPSTVSNKEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSE 79
          PVVMNPISRQNFIVK  SE
Sbjct: 61 PVVMNPISRQNFIVKAGSE 79

[Close]

BLAST of MC01g0176 vs. TAIR 10
Match: AT1G01170.1 (Protein of unknown function (DUF1138) )

HSP 1 Score: 120.2 bits (300), Expect = 7.7e-28
Identity = 55/76 (72.37%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 4  KYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGPPVV 63
          KYI+ ++IG+  I+Y+ D +I+D KIFGG+TP TVSNKEW   TD+KFQAWPRTAGPPVV
Sbjct: 8  KYIIGALIGSFGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPPVV 67

Query: 64 MNPISRQNFIVKTRSE 80
          MNPISRQNFIVKTR E
Sbjct: 68 MNPISRQNFIVKTRPE 83

[Close]

BLAST of MC01g0176 vs. TAIR 10
Match: AT1G01170.2 (Protein of unknown function (DUF1138) )

HSP 1 Score: 120.2 bits (300), Expect = 7.7e-28
Identity = 55/76 (72.37%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 4  KYILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGPPVV 63
          KYI+ ++IG+  I+Y+ D +I+D KIFGG+TP TVSNKEW   TD+KFQAWPRTAGPPVV
Sbjct: 8  KYIIGALIGSFGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPPVV 67

Query: 64 MNPISRQNFIVKTRSE 80
          MNPISRQNFIVKTR E
Sbjct: 68 MNPISRQNFIVKTRPE 83

[Close]

BLAST of MC01g0176 vs. TAIR 10
Match: AT4G00860.1 (Protein of unknown function (DUF1138) )

HSP 1 Score: 106.7 bits (265), Expect = 8.8e-24
Identity = 46/75 (61.33%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 5  YILASVIGASAIAYVSDYLIADKKIFGGSTPSTVSNKEWLEETDKKFQAWPRTAGPPVVM 64
          YI+ ++ G++ +AYV D +I+D K+FGG+TP T++NKEW   T+++ QAWPR AGPPVVM
Sbjct: 6  YIIGALAGSAVVAYVCDKVISDDKLFGGTTPGTITNKEWGAATEERLQAWPRVAGPPVVM 65

Query: 65 NPISRQNFIVKTRSE 80
          NPISRQNFIVK+R E
Sbjct: 66 NPISRQNFIVKSRPE 80

The following BLAST results are available for this feature:

BLAST of MC01g0176 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g0176 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152252.1	4.86e-49	100.00	uncharacterized protein LOC111020022 [Momordica charantia]	[more]
XP_038883759.1	3.59e-42	83.54	uncharacterized protein LOC120074644 [Benincasa hispida] >XP_038883760.1 unchara...	[more]
XP_022966506.1	7.24e-42	82.28	uncharacterized protein LOC111466138 [Cucurbita maxima]	[more]
XP_022925267.1	2.95e-41	81.01	uncharacterized protein LOC111432556 [Cucurbita moschata] >KAG7027625.1 hypothet...	[more]
XP_023517179.1	4.19e-41	81.01	uncharacterized protein LOC111781016 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC01g0176 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DFP1	2.35e-49	100.00	uncharacterized protein LOC111020022 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1HPI7	3.51e-42	82.28	uncharacterized protein LOC111466138 OS=Cucurbita maxima OX=3661 GN=LOC111466138...	[more]
A0A6J1EBA8	1.43e-41	81.01	uncharacterized protein LOC111432556 OS=Cucurbita moschata OX=3662 GN=LOC1114325...	[more]
A0A0A0KYC7	4.10e-41	81.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166930 PE=4 SV=1	[more]
A0A061EWV8	5.83e-41	84.81	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024708 PE=4 SV=1	[more]

BLAST of MC01g0176 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01170.1	7.7e-28	72.37	Protein of unknown function (DUF1138)	[more]
AT1G01170.2	7.7e-28	72.37	Protein of unknown function (DUF1138)	[more]
AT4G00860.1	8.8e-24	61.33	Protein of unknown function (DUF1138)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009515	Protein of unknown function DUF1138	PFAM	PF06592	DUF1138	coord: 3..75 e-value: 1.4E-41 score: 140.4
IPR009515	Protein of unknown function DUF1138	PANTHER	PTHR34267	OS11G0161033 PROTEIN	coord: 1..78
None	No IPR available	PANTHER	PTHR34267:SF1	OS11G0161033 PROTEIN	coord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0176.1	MC01g0176.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane