MC01g0173 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0173
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	40S ribosomal protein s2
Location	MC01: 7876583 .. 7878938 (+)
RNA-Seq Expression	MC01g0173
Synteny	MC01g0173

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGATACTAAATCGAAACTAAAACAAAAATCATATAGATCGTATTGAAATCACGTCCAAATCATAGGGATCAAATTCATAATTAAACCTAATTGCAATATTGGGACTCCAATAAAAATCCCATAGGATAGAATTGAATCATGGGCTTCAATTGGGCCGGAACATGGGCCGGACAGGATCAGATTCTTGAGACGGGCCCAAACAGAATTGGGCCAAAGGCGGGTCATGCTACTCCTATATCCAAGCAGCACCAAAAGCTGAATCCATGAAACCTAGAAACCCATATAAATTCCTTCTTTAGGGTTTCTTCTTCCTCATACTATCCCAAACTTCCATTTTCTCTCCCGTTCTCTCGTGCCGCATAACCTTTGAACCCTAAATCATGGCTGAAAGAGGAGGAGAACGCGGCGGCTTCGGCAGGGGATTTGGCGGCAGAGGCCGTGGTGGTGACCGTGGCCGCGGCCGCCGTCGTGCAGGCCGCCGCGACGAAGAGGAGAAGTGGGTTCCAGTCACTAAGCTCGGCCGTCTCGTGAAGGAAGGTAAGATTCAGTCATTGGAGCAGATTTACCTCCACTCACTCCCAATCAAGGAGCACCAGATCGTCGATACTCTCATCGGCCCCAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTGCAGAAGCAGACCCGTGCCGGTCAGAGAACTAGGTTTAAGGCCTTCGTGGTCGTCGGCGACGGCAATGGCCATGTCGGATTGGGAGTTAAGTGCAGCAAGGAGGTGGCGACTGCTATTCGCGGTTCGATCATATTGGCTAAGTTGTCGGTCATCCCTGTGAGGAGGGGTTACTGGGGGAACAAGATCGGAAAGCCTCATACTGTACCGTGCAAGGTCACCGGAAAGTGTGGCTCTGTCACCGTCCGTATGGTCCCTGCTCCTCGTGGAGCTGGGATTGTCGCCGCTAGGGTTCCCAAGAAGGTGCTGCAATTCGCTGGTATTGAGGATGTTTTTACCTCTTCGAGGGGTTCGACTAAGACTCTTGGTAACTTTGTGAAGGTATGTTATTTATGAATTGAGTTTTTTGTTGCGGCATTCAGTATTAAGAGTGGCATTTATACCTCACCCTTGTTTAGATTTTGAATCATGGTCTGTTTTAAAGTTATTTATGGATATGTTTGTGATTGTGGGCTGTTTGTGTTTTAATTTCTTCTCGTTGTTTGATTTCCTATTATGAAAATAGAGTTAAAATCTTTTTGTTTGGTATCTTTTATGTTATTTTGCTTTGAGATTGTGGAAGAGTGTCTTGTATAAAGGACATGGGTTTTCTAACCTACTGTATGATTGTTTTAATTGCTAGGTAGTTTAGCCCAGAATAGTGATGAGTAAAATAAATCATGTGGGTTTTCACAAATTAGTGAATACGCTTTTGGGAAGACTATTCTTTTATGAATCATAGTCTATTTGAGGTTGATTTTTTGGTGAATATGTTTTTTTGGTATCAAGAAGAGAAAATATGAAATTAGTTTATAGGTTTTGTAGGAGTTTTATGGTGATTTGGTGTGGGAATGCATCATGTGTAACTTTTCAAATTTTTTTATTGATGTTTCAAATTATAGTACTTGAAATAATTCTTGTGATTGAATGGCATGGAATCAATTGCTCTTGAAGTTGTTGTTTGCATATGGTGCACATGGATGCAAAGTTTCTTTTCGAAATTGCATGCTAGAGATATCACTCAAACAGATTATTCATATCCTGAACTTGAACTAGTGTCCGCAATCTGTTTTTTTTTTTTTATGTTCTGATTTGATTTCTTATTTAAGTGTGAACATTTCCATTATTTTCAGGCAACCTTTGATTGTCTATTGAAAACCTACGGTTTCCTCACACCCGAATTCTGGAGAGAGACTCGCTTCACCAAGTCTCCATTCCAAGAGCACACTGATCTGTTGGCCAAACCGACTGTGAAGGCATTGTTGTTGGATGATGCTGAGAGGGTTGCTGCTTAAGCCACATAGATTTGGTATGATTTCAAAAAGAGGAATGTTTTTGTTAGGAACTCCATAGTATATGCTTTCAGTTGAATTCATTTACTTTCAAGGATAGTGTGTTATCTATTTCCTATTGGTACTTGACTCTGTTTTTGTTTCTGAATCCAATGCCATAAAGCTTGATTTTGAATGCACTAATGTTTCTTATTATAAGAAAGATGCACCAATATTAAGTTGGATGTTACATTCTTCAGATTTGAATCCACAAAGCATAGCTCTAAAAAGAATTTTACAAGAGGCTTTAACATCATATCAGTGGTTTCTGCTGAAATTTTTCAAGTTTCATATGTTTATCTCAATGATAGAGTTAGTTTGCACTTTGCAGG

mRNA sequence

CAGATACTAAATCGAAACTAAAACAAAAATCATATAGATCGTATTGAAATCACGTCCAAATCATAGGGATCAAATTCATAATTAAACCTAATTGCAATATTGGGACTCCAATAAAAATCCCATAGGATAGAATTGAATCATGGGCTTCAATTGGGCCGGAACATGGGCCGGACAGGATCAGATTCTTGAGACGGGCCCAAACAGAATTGGGCCAAAGGCGGGTCATGCTACTCCTATATCCAAGCAGCACCAAAAGCTGAATCCATGAAACCTAGAAACCCATATAAATTCCTTCTTTAGGGTTTCTTCTTCCTCATACTATCCCAAACTTCCATTTTCTCTCCCGTTCTCTCGTGCCGCATAACCTTTGAACCCTAAATCATGGCTGAAAGAGGAGGAGAACGCGGCGGCTTCGGCAGGGGATTTGGCGGCAGAGGCCGTGGTGGTGACCGTGGCCGCGGCCGCCGTCGTGCAGGCCGCCGCGACGAAGAGGAGAAGTGGGTTCCAGTCACTAAGCTCGGCCGTCTCGTGAAGGAAGGTAAGATTCAGTCATTGGAGCAGATTTACCTCCACTCACTCCCAATCAAGGAGCACCAGATCGTCGATACTCTCATCGGCCCCAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTGCAGAAGCAGACCCGTGCCGGTCAGAGAACTAGGTTTAAGGCCTTCGTGGTCGTCGGCGACGGCAATGGCCATGTCGGATTGGGAGTTAAGTGCAGCAAGGAGGTGGCGACTGCTATTCGCGGTTCGATCATATTGGCTAAGTTGTCGGTCATCCCTGTGAGGAGGGGTTACTGGGGGAACAAGATCGGAAAGCCTCATACTGTACCGTGCAAGGTCACCGGAAAGTGTGGCTCTGTCACCGTCCGTATGGTCCCTGCTCCTCGTGGAGCTGGGATTGTCGCCGCTAGGGTTCCCAAGAAGGTGCTGCAATTCGCTGGTATTGAGGATGTTTTTACCTCTTCGAGGGGTTCGACTAAGACTCTTGGTAACTTTGTGAAGGCAACCTTTGATTGTCTATTGAAAACCTACGGTTTCCTCACACCCGAATTCTGGAGAGAGACTCGCTTCACCAAGTCTCCATTCCAAGAGCACACTGATCTGTTGGCCAAACCGACTGTGAAGGCATTGTTGTTGGATGATGCTGAGAGGGTTGCTGCTTAAGCCACATAGATTTGGTATGATTTCAAAAAGAGGAATGTTTTTGTTAGGAACTCCATAGTATATGCTTTCAGTTGAATTCATTTACTTTCAAGGATAGTGTGTTATCTATTTCCTATTGGTACTTGACTCTGTTTTTGTTTCTGAATCCAATGCCATAAAGCTTGATTTTGAATGCACTAATGTTTCTTATTATAAGAAAGATGCACCAATATTAAGTTGGATGTTACATTCTTCAGATTTGAATCCACAAAGCATAGCTCTAAAAAGAATTTTACAAGAGGCTTTAACATCATATCAGTGGTTTCTGCTGAAATTTTTCAAGTTTCATATGTTTATCTCAATGATAGAGTTAGTTTGCACTTTGCAGG

Coding sequence (CDS)

ATGGCTGAAAGAGGAGGAGAACGCGGCGGCTTCGGCAGGGGATTTGGCGGCAGAGGCCGTGGTGGTGACCGTGGCCGCGGCCGCCGTCGTGCAGGCCGCCGCGACGAAGAGGAGAAGTGGGTTCCAGTCACTAAGCTCGGCCGTCTCGTGAAGGAAGGTAAGATTCAGTCATTGGAGCAGATTTACCTCCACTCACTCCCAATCAAGGAGCACCAGATCGTCGATACTCTCATCGGCCCCAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTGCAGAAGCAGACCCGTGCCGGTCAGAGAACTAGGTTTAAGGCCTTCGTGGTCGTCGGCGACGGCAATGGCCATGTCGGATTGGGAGTTAAGTGCAGCAAGGAGGTGGCGACTGCTATTCGCGGTTCGATCATATTGGCTAAGTTGTCGGTCATCCCTGTGAGGAGGGGTTACTGGGGGAACAAGATCGGAAAGCCTCATACTGTACCGTGCAAGGTCACCGGAAAGTGTGGCTCTGTCACCGTCCGTATGGTCCCTGCTCCTCGTGGAGCTGGGATTGTCGCCGCTAGGGTTCCCAAGAAGGTGCTGCAATTCGCTGGTATTGAGGATGTTTTTACCTCTTCGAGGGGTTCGACTAAGACTCTTGGTAACTTTGTGAAGGCAACCTTTGATTGTCTATTGAAAACCTACGGTTTCCTCACACCCGAATTCTGGAGAGAGACTCGCTTCACCAAGTCTCCATTCCAAGAGCACACTGATCTGTTGGCCAAACCGACTGTGAAGGCATTGTTGTTGGATGATGCTGAGAGGGTTGCTGCTTAA

Protein sequence

MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA

Homology

[Close]

BLAST of MC01g0173 vs. ExPASy Swiss-Prot
Match: Q9SCM3 (40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.7e-124
Identity = 229/260 (88.08%), Postives = 244/260 (93.85%), Query Frame = 0


Query: 3   ERGGERGGFGRGFGGR--GRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           ERGG+RG FGRGFGGR  GRGG RGRG RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQ
Sbjct: 7   ERGGDRGDFGRGFGGRGGGRGGPRGRG-RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQ 66

Query: 63  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QI+D L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD NGHVGLG
Sbjct: 67  IYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLG 126

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 127 VKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 186

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 187 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 246

Query: 243 FTKSPFQEHTD-LLAKPTVK 260
           F+KSP+QEHTD LL  P VK
Sbjct: 247 FSKSPYQEHTDFLLIPPGVK 265

[Close]

BLAST of MC01g0173 vs. ExPASy Swiss-Prot
Match: P49688 (40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2)

HSP 1 Score: 440.7 bits (1132), Expect = 1.2e-122
Identity = 224/258 (86.82%), Postives = 238/258 (92.25%), Query Frame = 0


Query: 3   ERGGERGGFGRGFGGRGRGGDR------GRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQ 62
           ERGGERG FGRGFGGRG  GDR      GRG RR GR  EEEKWVPVTKLGRLV  G I+
Sbjct: 11  ERGGERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIK 70

Query: 63  SLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGH 122
            +EQIYLHSLP+KE+QI+D LIGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGH
Sbjct: 71  QIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGH 130

Query: 123 VGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 182
           VGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV
Sbjct: 131 VGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 190

Query: 183 PAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW 242
           PAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW
Sbjct: 191 PAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFW 250

Query: 243 RETRFTKSPFQEHTDLLA 255
           +ETRF++SP+QEHTD LA
Sbjct: 251 KETRFSRSPYQEHTDFLA 268

[Close]

BLAST of MC01g0173 vs. ExPASy Swiss-Prot
Match: Q8L8Y0 (40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2)

HSP 1 Score: 437.2 bits (1123), Expect = 1.4e-121
Identity = 224/265 (84.53%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 2   AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKI 61
           AERGG+RG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI
Sbjct: 10  AERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKI 69

Query: 62  QSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 121
             LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG
Sbjct: 70  TKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 129

Query: 122 HVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 181
           HVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM
Sbjct: 130 HVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 189

Query: 182 VPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEF 241
           VPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEF
Sbjct: 190 VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEF 249

Query: 242 WRETRFTKSPFQEHTDLLAKPTVKA 261
           W+ETRF++SP+QEHTD L+   V A
Sbjct: 250 WKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of MC01g0173 vs. ExPASy Swiss-Prot
Match: Q93VB8 (40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.4e-121
Identity = 224/265 (84.53%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 2   AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKI 61
           AERGG+RG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI
Sbjct: 10  AERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKI 69

Query: 62  QSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 121
             LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG
Sbjct: 70  TKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 129

Query: 122 HVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 181
           HVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM
Sbjct: 130 HVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 189

Query: 182 VPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEF 241
           VPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEF
Sbjct: 190 VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEF 249

Query: 242 WRETRFTKSPFQEHTDLLAKPTVKA 261
           W+ETRF++SP+QEHTD L+   V A
Sbjct: 250 WKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of MC01g0173 vs. ExPASy Swiss-Prot
Match: P15880 (40S ribosomal protein S2 OS=Homo sapiens OX=9606 GN=RPS2 PE=1 SV=2)

HSP 1 Score: 373.2 bits (957), Expect = 2.4e-102
Identity = 189/257 (73.54%), Postives = 218/257 (84.82%), Query Frame = 0


Query: 1   MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGR--RDEEEKWVPVTKLGRLVKEGKIQSL 60
           M  RGG RGGFG G  GRGRG  RGRGR R  R  + E+++W+PVTKLGRLVK+ KI+SL
Sbjct: 19  MGNRGGFRGGFGSGIRGRGRGRGRGRGRGRGARGGKAEDKEWMPVTKLGRLVKDMKIKSL 78

Query: 61  EQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVG 120
           E+IYL SLPIKE +I+D  +G SLKDEV+KIMPVQKQTRAGQRTRFKAFV +GD NGHVG
Sbjct: 79  EEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVG 138

Query: 121 LGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPA 180
           LGVKCSKEVATAIRG+IILAKLS++PVRRGYWGNKIGKPHTVPCKVTG+CGSV VR++PA
Sbjct: 139 LGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPA 198

Query: 181 PRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRE 240
           PRG GIV+A VPKK+L  AGI+D +TS+RG T TLGNF KATFD + KTY +LTP+ W+E
Sbjct: 199 PRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKE 258

Query: 241 TRFTKSPFQEHTDLLAK 256
           T FTKSP+QE TD L K
Sbjct: 259 TVFTKSPYQEFTDHLVK 275

[Close]

BLAST of MC01g0173 vs. NCBI nr
Match: XP_008460763.1 (PREDICTED: 40S ribosomal protein S2-4-like [Cucumis melo] >KAA0056140.1 40S ribosomal protein S2-4-like [Cucumis melo var. makuwa] >TYK14145.1 40S ribosomal protein S2-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 526 bits (1354), Expect = 6.05e-188
Identity = 269/271 (99.26%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120
           IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240

Query: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVAA 271
           FTKSPFQEHTDLLAKPTVKALLL+DAERVAA
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLEDAERVAA 271

[Close]

BLAST of MC01g0173 vs. NCBI nr
Match: XP_022928633.1 (40S ribosomal protein S2-4-like [Cucurbita moschata] >XP_022967881.1 40S ribosomal protein S2-4-like [Cucurbita maxima] >XP_023518394.1 40S ribosomal protein S2-4-like [Cucurbita pepo subsp. pepo] >XP_023544834.1 40S ribosomal protein S2-4-like [Cucurbita pepo subsp. pepo] >KAG6603223.1 40S ribosomal protein S2-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033531.1 40S ribosomal protein S2-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523 bits (1346), Expect = 1.00e-186
Identity = 267/271 (98.52%), Postives = 270/271 (99.63%), Query Frame = 0


Query: 1   MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120
           IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETR 240

Query: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVAA 271
           FTKSPFQEHTDLLAKPTVKALLLDDAERV A
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVNA 271

[Close]

BLAST of MC01g0173 vs. NCBI nr
Match: XP_004149390.2 (40S ribosomal protein S2-4 [Cucumis sativus] >KGN53852.1 hypothetical protein Csa_019128 [Cucumis sativus])

HSP 1 Score: 521 bits (1343), Expect = 2.87e-186
Identity = 267/271 (98.52%), Postives = 270/271 (99.63%), Query Frame = 0


Query: 1   MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRR+EEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRREEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120
           IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240

Query: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVAA 271
           FTKSPFQEHTDLLAKPTVKALLL+DAER AA
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLEDAERGAA 271

[Close]

BLAST of MC01g0173 vs. NCBI nr
Match: XP_038882736.1 (40S ribosomal protein S2-4-like [Benincasa hispida])

HSP 1 Score: 520 bits (1340), Expect = 8.24e-186
Identity = 265/269 (98.51%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120
           IYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240

Query: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERV 269
           FTKSPFQEHTDLLAKPTVKALLL+D ERV
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLEDPERV 269

[Close]

BLAST of MC01g0173 vs. NCBI nr
Match: XP_038883184.1 (40S ribosomal protein S2-4 [Benincasa hispida])

HSP 1 Score: 518 bits (1334), Expect = 6.77e-185
Identity = 264/269 (98.14%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120
           IYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240

Query: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERV 269
           FTKSPFQEHTDLLAKPTVKALLL+D E V
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLEDPESV 269

[Close]

BLAST of MC01g0173 vs. ExPASy TrEMBL
Match: A0A5A7ULX0 (40S ribosomal protein S2-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold513G00150 PE=3 SV=1)

HSP 1 Score: 526 bits (1354), Expect = 2.93e-188
Identity = 269/271 (99.26%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120
           IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240

Query: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVAA 271
           FTKSPFQEHTDLLAKPTVKALLL+DAERVAA
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLEDAERVAA 271

[Close]

BLAST of MC01g0173 vs. ExPASy TrEMBL
Match: A0A1S3CCQ1 (40S ribosomal protein S2-4-like OS=Cucumis melo OX=3656 GN=LOC103499519 PE=3 SV=1)

HSP 1 Score: 526 bits (1354), Expect = 2.93e-188
Identity = 269/271 (99.26%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120
           IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240

Query: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVAA 271
           FTKSPFQEHTDLLAKPTVKALLL+DAERVAA
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLEDAERVAA 271

[Close]

BLAST of MC01g0173 vs. ExPASy TrEMBL
Match: A0A6J1HTA3 (40S ribosomal protein S2-4-like OS=Cucurbita maxima OX=3661 GN=LOC111467257 PE=3 SV=1)

HSP 1 Score: 523 bits (1346), Expect = 4.86e-187
Identity = 267/271 (98.52%), Postives = 270/271 (99.63%), Query Frame = 0


Query: 1   MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120
           IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETR 240

Query: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVAA 271
           FTKSPFQEHTDLLAKPTVKALLLDDAERV A
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVNA 271

[Close]

BLAST of MC01g0173 vs. ExPASy TrEMBL
Match: A0A6J1EPL6 (40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111435482 PE=3 SV=1)

HSP 1 Score: 523 bits (1346), Expect = 4.86e-187
Identity = 267/271 (98.52%), Postives = 270/271 (99.63%), Query Frame = 0


Query: 1   MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120
           IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETR 240

Query: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVAA 271
           FTKSPFQEHTDLLAKPTVKALLLDDAERV A
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVNA 271

[Close]

BLAST of MC01g0173 vs. ExPASy TrEMBL
Match: A0A0A0KZQ4 (S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G166960 PE=3 SV=1)

HSP 1 Score: 521 bits (1343), Expect = 1.39e-186
Identity = 267/271 (98.52%), Postives = 270/271 (99.63%), Query Frame = 0


Query: 1   MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 60
           MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRR+EEEKWVPVTKLGRLVKEGKIQSLEQ
Sbjct: 1   MAERGGDRGGFGRGFGGRGRGGDRGRGRRRAGRREEEEKWVPVTKLGRLVKEGKIQSLEQ 60

Query: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120
           IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 61  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 120

Query: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180
           VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 121 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 180

Query: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240
           GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR
Sbjct: 181 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 240

Query: 241 FTKSPFQEHTDLLAKPTVKALLLDDAERVAA 271
           FTKSPFQEHTDLLAKPTVKALLL+DAER AA
Sbjct: 241 FTKSPFQEHTDLLAKPTVKALLLEDAERGAA 271

[Close]

BLAST of MC01g0173 vs. TAIR 10
Match: AT3G57490.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 446.8 bits (1148), Expect = 1.2e-125
Identity = 229/260 (88.08%), Postives = 244/260 (93.85%), Query Frame = 0


Query: 3   ERGGERGGFGRGFGGR--GRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           ERGG+RG FGRGFGGR  GRGG RGRG RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQ
Sbjct: 7   ERGGDRGDFGRGFGGRGGGRGGPRGRG-RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQ 66

Query: 63  IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QI+D L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD NGHVGLG
Sbjct: 67  IYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLG 126

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 127 VKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 186

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 187 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 246

Query: 243 FTKSPFQEHTD-LLAKPTVK 260
           F+KSP+QEHTD LL  P VK
Sbjct: 247 FSKSPYQEHTDFLLIPPGVK 265

[Close]

BLAST of MC01g0173 vs. TAIR 10
Match: AT2G41840.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 440.7 bits (1132), Expect = 8.8e-124
Identity = 224/258 (86.82%), Postives = 238/258 (92.25%), Query Frame = 0


Query: 3   ERGGERGGFGRGFGGRGRGGDR------GRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQ 62
           ERGGERG FGRGFGGRG  GDR      GRG RR GR  EEEKWVPVTKLGRLV  G I+
Sbjct: 11  ERGGERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIK 70

Query: 63  SLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGH 122
            +EQIYLHSLP+KE+QI+D LIGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGH
Sbjct: 71  QIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGH 130

Query: 123 VGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 182
           VGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV
Sbjct: 131 VGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 190

Query: 183 PAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW 242
           PAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW
Sbjct: 191 PAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFW 250

Query: 243 RETRFTKSPFQEHTDLLA 255
           +ETRF++SP+QEHTD LA
Sbjct: 251 KETRFSRSPYQEHTDFLA 268

[Close]

BLAST of MC01g0173 vs. TAIR 10
Match: AT1G58983.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 437.2 bits (1123), Expect = 9.7e-123
Identity = 224/265 (84.53%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 2   AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKI 61
           AERGG+RG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI
Sbjct: 10  AERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKI 69

Query: 62  QSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 121
             LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG
Sbjct: 70  TKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 129

Query: 122 HVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 181
           HVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM
Sbjct: 130 HVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 189

Query: 182 VPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEF 241
           VPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEF
Sbjct: 190 VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEF 249

Query: 242 WRETRFTKSPFQEHTDLLAKPTVKA 261
           W+ETRF++SP+QEHTD L+   V A
Sbjct: 250 WKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of MC01g0173 vs. TAIR 10
Match: AT1G59359.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 437.2 bits (1123), Expect = 9.7e-123
Identity = 224/265 (84.53%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 2   AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKI 61
           AERGG+RG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI
Sbjct: 10  AERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKI 69

Query: 62  QSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 121
             LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG
Sbjct: 70  TKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 129

Query: 122 HVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 181
           HVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM
Sbjct: 130 HVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 189

Query: 182 VPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEF 241
           VPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEF
Sbjct: 190 VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEF 249

Query: 242 WRETRFTKSPFQEHTDLLAKPTVKA 261
           W+ETRF++SP+QEHTD L+   V A
Sbjct: 250 WKETRFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of MC01g0173 vs. TAIR 10
Match: AT1G58380.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 437.2 bits (1123), Expect = 9.7e-123
Identity = 224/265 (84.53%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 2   AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKI 61
           AERGG+RG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI
Sbjct: 10  AERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKI 69

Query: 62  QSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 121
             LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG
Sbjct: 70  TKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 129

Query: 122 HVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 181
           HVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM
Sbjct: 130 HVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRM 189

Query: 182 VPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEF 241
           VPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEF
Sbjct: 190 VPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEF 249

Query: 242 WRETRFTKSPFQEHTDLLAKPTVKA 261
           W+ETRF++SP+QEHTD L+   V A
Sbjct: 250 WKETRFSRSPYQEHTDFLSTKAVSA 273

The following BLAST results are available for this feature:

BLAST of MC01g0173 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCM3	1.7e-124	88.08	40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1	[more]
P49688	1.2e-122	86.82	40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2	[more]
Q8L8Y0	1.4e-121	84.53	40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2	[more]
Q93VB8	1.4e-121	84.53	40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1	[more]
P15880	2.4e-102	73.54	40S ribosomal protein S2 OS=Homo sapiens OX=9606 GN=RPS2 PE=1 SV=2	[more]

BLAST of MC01g0173 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460763.1	6.05e-188	99.26	PREDICTED: 40S ribosomal protein S2-4-like [Cucumis melo] >KAA0056140.1 40S ribo...	[more]
XP_022928633.1	1.00e-186	98.52	40S ribosomal protein S2-4-like [Cucurbita moschata] >XP_022967881.1 40S ribosom...	[more]
XP_004149390.2	2.87e-186	98.52	40S ribosomal protein S2-4 [Cucumis sativus] >KGN53852.1 hypothetical protein Cs...	[more]
XP_038882736.1	8.24e-186	98.51	40S ribosomal protein S2-4-like [Benincasa hispida]	[more]
XP_038883184.1	6.77e-185	98.14	40S ribosomal protein S2-4 [Benincasa hispida]	[more]

BLAST of MC01g0173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ULX0	2.93e-188	99.26	40S ribosomal protein S2-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CCQ1	2.93e-188	99.26	40S ribosomal protein S2-4-like OS=Cucumis melo OX=3656 GN=LOC103499519 PE=3 SV=...	[more]
A0A6J1HTA3	4.86e-187	98.52	40S ribosomal protein S2-4-like OS=Cucurbita maxima OX=3661 GN=LOC111467257 PE=3...	[more]
A0A6J1EPL6	4.86e-187	98.52	40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111435482 PE...	[more]
A0A0A0KZQ4	1.39e-186	98.52	S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G166960 PE=...	[more]

BLAST of MC01g0173 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57490.1	1.2e-125	88.08	Ribosomal protein S5 family protein	[more]
AT2G41840.1	8.8e-124	86.82	Ribosomal protein S5 family protein	[more]
AT1G58983.1	9.7e-123	84.53	Ribosomal protein S5 family protein	[more]
AT1G59359.1	9.7e-123	84.53	Ribosomal protein S5 family protein	[more]
AT1G58380.1	9.7e-123	84.53	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 82..146 e-value: 7.0E-30 score: 102.8
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 82..145 score: 22.755819
None	No IPR available	GENE3D	3.30.160.20		coord: 39..144 e-value: 1.0E-55 score: 188.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR13718:SF101	40S RIBOSOMAL PROTEIN S2-1-RELATED	coord: 1..268
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 78..147
IPR005711	Ribosomal protein S5, eukaryotic/archaeal	TIGRFAM	TIGR01020	TIGR01020	coord: 35..242 e-value: 6.9E-94 score: 311.2
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 165..231 e-value: 8.8E-24 score: 82.8
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 145..238 e-value: 9.6E-51 score: 171.9
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 1..268
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 99..131
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 158..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0173.1	MC01g0173.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding