MC01g0164 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0164
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	BnaC09g29120D protein
Location	MC01: 7597000 .. 7597394 (-)
RNA-Seq Expression	MC01g0164
Synteny	MC01g0164

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATCGAATGGATCGGATCATGTACAAACAAGGTTCAAGTCTAACGATCTGTTAGGATGTCTCAGCTGCATACATGACTGCACTCCCACTTGACACCTATCGTGATGATAAACGGTCCATCTCGCCGTGACATTCTCTTGAATTCTCAAAATTTCTGCCGCTTCATCCCCGCAGGGGCAGAGAACTCATCGCTGTCTTGGCTGTTCTACTGAAGGTGCTGGGGAAGTCCGAATAGGAGAGCACTCATCTTGAGATGGGCTTACTACTTAGATGCTTTCAGCAATTATCCGCTCCGCACTTGGCTATCCAAAGTTTACCATGGGACATGATAACTGGTACACTAAGAGGTGATAACTGGTACACTAGAGGTGCGTCCTTCCCTATCCTCTCGTAC

mRNA sequence

CTAATCGAATGGATCGGATCATGTACAAACAAGGTTCAAGTCTAACGATCTGTTAGGATGTCTCAGCTGCATACATGACTGCACTCCCACTTGACACCTATCGTGATGATAAACGGTCCATCTCGCCGTGACATTCTCTTGAATTCTCAAAATTTCTGCCGCTTCATCCCCGCAGGGGCAGAGAACTCATCGCTGTCTTGGCTGTTCTACTGAAGGTGCTGGGGAAGTCCGAATAGGAGAGCACTCATCTTGAGATGGGCTTACTACTTAGATGCTTTCAGCAATTATCCGCTCCGCACTTGGCTATCCAAAGTTTACCATGGGATAACTGGTACACTAAGAGGTGATAACTGGTACACTAGAGGTGCGTCCTTCCCTATCCTCTCGTAC

Coding sequence (CDS)

CTAATCGAATGGATCGGATCATGTACAAACAAGGTTCAAGTCTAACGATCTGTTAGGATGTCTCAGCTGCATACATGACTGCACTCCCACTTGACACCTATCGTGATGATAAACGGTCCATCTCGCCGTGACATTCTCTTGAATTCTCAAAATTTCTGCCGCTTCATCCCCGCAGGGGCAGAGAACTCATCGCTGTCTTGGCTGTTCTACTGAAGGTGCTGGGGAAGTCCGAATAGGAGAGCACTCATCTTGAGATGGGCTTACTACTTAGATGCTTTCAGCAATTATCCGCTCCGCACTTGGCTATCCAAAGTTTACCATGGGATAACTGGTACACTAAGAGGTGATAACTGGTACACTAGAGGTGCGTCCTTCCCTATCCTCTCGTAC

Protein sequence

LIEWIGSCTNKVQVURSVRMSQLHTULHSHLTPIVMINGPSRRDILLNSQNFCRFIPAGAENSSLSWLFYURCWGSPNRRALILRWAYYLDAFSNYPLRTWLSKVYHGITGTLRGDNWYTRGASFPILSY

Homology

[Close]

BLAST of MC01g0164 vs. NCBI nr
Match: CAB4269449.1 (unnamed protein product [Prunus armeniaca] >CAB4284031.1 unnamed protein product [Prunus armeniaca] >CAB4314312.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 207 bits (526), Expect = 2.40e-66
Identity = 102/130 (78.46%), Postives = 105/130 (80.77%), Query Frame = 0


Query: 1   LIEWIGSCTNKVQVXRSVRMSQLHTXLHSHLTPIVMINGPSRRDILLNSQNFCRFIPAGA 60
           LIE IGSC NKVQV RSVRM QLHT LH HLTPIVMING SRRD+LLNSQNFCR  PAGA
Sbjct: 8   LIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSTPAGA 67

Query: 61  ENSSLSWLFYXRCWGSPNRRALILRWAYYLDAFSNYPLRTWLSKVYHGITGTLRGDNWYT 120
           EN SLSWL Y R WGS NRRALIL WAYYLDAFS+YPLRTWL  VY G       DNWYT
Sbjct: 68  ENPSLSWLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRG------HDNWYT 127

Query: 121 RGASFPILSY 130
           RGASFP+LSY
Sbjct: 128 RGASFPVLSY 131

[Close]

BLAST of MC01g0164 vs. NCBI nr
Match: KAG6618057.1 (hypothetical protein I3842_Q128200 [Carya illinoinensis])

HSP 1 Score: 206 bits (523), Expect = 6.87e-66
Identity = 102/130 (78.46%), Postives = 105/130 (80.77%), Query Frame = 0


Query: 1   LIEWIGSCTNKVQVXRSVRMSQLHTXLHSHLTPIVMINGPSRRDILLNSQNFCRFIPAGA 60
           LIEWIGSC NKVQV RSVRM QLHT LH HLTPIVMING SRRD+LLNSQNFCR IPAGA
Sbjct: 8   LIEWIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGA 67

Query: 61  ENSSLSWLFYXRCWGSPNRRALILRWAYYLDAFSNYPLRTWLSKVYHGITGTLRGDNWYT 120
           EN SLS L Y   WGS NRRALIL WAYYLDAFS+YPLRTWL  VY G       DNWYT
Sbjct: 68  ENPSLSRLCYRGLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRG------HDNWYT 127

Query: 121 RGASFPILSY 130
           RGASFP+LSY
Sbjct: 128 RGASFPVLSY 131

[Close]

BLAST of MC01g0164 vs. NCBI nr
Match: KAF3952863.1 (hypothetical protein CMV_021630 [Castanea mollissima])

HSP 1 Score: 203 bits (517), Expect = 5.29e-65
Identity = 102/130 (78.46%), Postives = 105/130 (80.77%), Query Frame = 0


Query: 1   LIEWIGSCTNKVQVXRSVRMSQLHTXLHSHLTPIVMINGPSRRDILLNSQNFCRFIPAGA 60
           LIE IGSC NKVQV RSVRM QLHT LH HLTPIVMING SRRD+LLNSQNFCR IPAGA
Sbjct: 6   LIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGA 65

Query: 61  ENSSLSWLFYXRCWGSPNRRALILRWAYYLDAFSNYPLRTWLSKVYHGITGTLRGDNWYT 120
           EN SLS L Y R WGS NRRALIL WAYYLDAFS+YPLRTWL  VY G       DNWYT
Sbjct: 66  ENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRG------HDNWYT 125

Query: 121 RGASFPILSY 130
           RGASFP+LSY
Sbjct: 126 RGASFPVLSY 129

[Close]

BLAST of MC01g0164 vs. NCBI nr
Match: KAB1210637.1 (hypothetical protein CJ030_MR6G010321 [Morella rubra] >KAB1226196.1 hypothetical protein CJ030_MR1G029169 [Morella rubra])

HSP 1 Score: 203 bits (517), Expect = 5.64e-65
Identity = 102/130 (78.46%), Postives = 105/130 (80.77%), Query Frame = 0


Query: 1   LIEWIGSCTNKVQVXRSVRMSQLHTXLHSHLTPIVMINGPSRRDILLNSQNFCRFIPAGA 60
           LIE IGSC NKVQV RSVRM QLHT LH HLTPIVMING SRRD+LLNSQNFCR IPAGA
Sbjct: 8   LIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGA 67

Query: 61  ENSSLSWLFYXRCWGSPNRRALILRWAYYLDAFSNYPLRTWLSKVYHGITGTLRGDNWYT 120
           EN SLS L Y R WGS NRRALIL WAYYLDAFS+YPLRTWL  VY G       DNWYT
Sbjct: 68  ENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRG------HDNWYT 127

Query: 121 RGASFPILSY 130
           RGASFP+LSY
Sbjct: 128 RGASFPVLSY 131

[Close]

BLAST of MC01g0164 vs. NCBI nr
Match: PLY71578.1 (hypothetical protein LSAT_1X88180 [Lactuca sativa] >PLY72081.1 hypothetical protein LSAT_9X121741 [Lactuca sativa] >PLY94770.1 hypothetical protein LSAT_2X97121 [Lactuca sativa] >PWA75058.1 hypothetical protein CTI12_AA247900 [Artemisia annua])

HSP 1 Score: 202 bits (513), Expect = 2.30e-64
Identity = 101/129 (78.29%), Postives = 104/129 (80.62%), Query Frame = 0


Query: 2   IEWIGSCTNKVQVXRSVRMSQLHTXLHSHLTPIVMINGPSRRDILLNSQNFCRFIPAGAE 61
           IE IGSC NKVQV RSVRM QLHT LH HLTPIVMING SRRD+LLNSQNFCR IPAGAE
Sbjct: 9   IELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAE 68

Query: 62  NSSLSWLFYXRCWGSPNRRALILRWAYYLDAFSNYPLRTWLSKVYHGITGTLRGDNWYTR 121
           N SLS L Y R WGS NRRALIL WAYYLDAFS+YPLRTWL  VY G       DNWYTR
Sbjct: 69  NPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRG------HDNWYTR 128

Query: 122 GASFPILSY 130
           GASFP+LSY
Sbjct: 129 GASFPVLSY 131

[Close]

BLAST of MC01g0164 vs. ExPASy TrEMBL
Match: A0A6J5XQ66 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS15013 PE=4 SV=1)

HSP 1 Score: 207 bits (526), Expect = 1.16e-66
Identity = 102/130 (78.46%), Postives = 105/130 (80.77%), Query Frame = 0


Query: 1   LIEWIGSCTNKVQVXRSVRMSQLHTXLHSHLTPIVMINGPSRRDILLNSQNFCRFIPAGA 60
           LIE IGSC NKVQV RSVRM QLHT LH HLTPIVMING SRRD+LLNSQNFCR  PAGA
Sbjct: 8   LIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSTPAGA 67

Query: 61  ENSSLSWLFYXRCWGSPNRRALILRWAYYLDAFSNYPLRTWLSKVYHGITGTLRGDNWYT 120
           EN SLSWL Y R WGS NRRALIL WAYYLDAFS+YPLRTWL  VY G       DNWYT
Sbjct: 68  ENPSLSWLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRG------HDNWYT 127

Query: 121 RGASFPILSY 130
           RGASFP+LSY
Sbjct: 128 RGASFPVLSY 131

[Close]

BLAST of MC01g0164 vs. ExPASy TrEMBL
Match: A0A2N9HQ72 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40355 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 2.73e-65
Identity = 102/130 (78.46%), Postives = 105/130 (80.77%), Query Frame = 0


Query: 1   LIEWIGSCTNKVQVXRSVRMSQLHTXLHSHLTPIVMINGPSRRDILLNSQNFCRFIPAGA 60
           LIE IGSC NKVQV RSVRM QLHT LH HLTPIVMING SRRD+LLNSQNFCR IPAGA
Sbjct: 8   LIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGA 67

Query: 61  ENSSLSWLFYXRCWGSPNRRALILRWAYYLDAFSNYPLRTWLSKVYHGITGTLRGDNWYT 120
           EN SLS L Y R WGS NRRALIL WAYYLDAFS+YPLRTWL  VY G       DNWYT
Sbjct: 68  ENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRG------HDNWYT 127

Query: 121 RGASFPILSY 130
           RGASFP+LSY
Sbjct: 128 RGASFPVLSY 131

[Close]

BLAST of MC01g0164 vs. ExPASy TrEMBL
Match: A0A6A1VFM0 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR1G029169 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 2.73e-65
Identity = 102/130 (78.46%), Postives = 105/130 (80.77%), Query Frame = 0


Query: 1   LIEWIGSCTNKVQVXRSVRMSQLHTXLHSHLTPIVMINGPSRRDILLNSQNFCRFIPAGA 60
           LIE IGSC NKVQV RSVRM QLHT LH HLTPIVMING SRRD+LLNSQNFCR IPAGA
Sbjct: 8   LIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGA 67

Query: 61  ENSSLSWLFYXRCWGSPNRRALILRWAYYLDAFSNYPLRTWLSKVYHGITGTLRGDNWYT 120
           EN SLS L Y R WGS NRRALIL WAYYLDAFS+YPLRTWL  VY G       DNWYT
Sbjct: 68  ENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRG------HDNWYT 127

Query: 121 RGASFPILSY 130
           RGASFP+LSY
Sbjct: 128 RGASFPVLSY 131

[Close]

BLAST of MC01g0164 vs. ExPASy TrEMBL
Match: A0A7N2N6W3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 2.73e-65
Identity = 102/130 (78.46%), Postives = 105/130 (80.77%), Query Frame = 0


Query: 1   LIEWIGSCTNKVQVXRSVRMSQLHTXLHSHLTPIVMINGPSRRDILLNSQNFCRFIPAGA 60
           LIE IGSC NKVQV RSVRM QLHT LH HLTPIVMING SRRD+LLNSQNFCR IPAGA
Sbjct: 8   LIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGA 67

Query: 61  ENSSLSWLFYXRCWGSPNRRALILRWAYYLDAFSNYPLRTWLSKVYHGITGTLRGDNWYT 120
           EN SLS L Y R WGS NRRALIL WAYYLDAFS+YPLRTWL  VY G       DNWYT
Sbjct: 68  ENPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRG------HDNWYT 127

Query: 121 RGASFPILSY 130
           RGASFP+LSY
Sbjct: 128 RGASFPVLSY 131

[Close]

BLAST of MC01g0164 vs. ExPASy TrEMBL
Match: A0A2J6KAH1 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_1X88180 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 1.11e-64
Identity = 101/129 (78.29%), Postives = 104/129 (80.62%), Query Frame = 0


Query: 2   IEWIGSCTNKVQVXRSVRMSQLHTXLHSHLTPIVMINGPSRRDILLNSQNFCRFIPAGAE 61
           IE IGSC NKVQV RSVRM QLHT LH HLTPIVMING SRRD+LLNSQNFCR IPAGAE
Sbjct: 9   IELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAE 68

Query: 62  NSSLSWLFYXRCWGSPNRRALILRWAYYLDAFSNYPLRTWLSKVYHGITGTLRGDNWYTR 121
           N SLS L Y R WGS NRRALIL WAYYLDAFS+YPLRTWL  VY G       DNWYTR
Sbjct: 69  NPSLSRLCYRRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRG------HDNWYTR 128

Query: 122 GASFPILSY 130
           GASFP+LSY
Sbjct: 129 GASFPVLSY 131

The following BLAST results are available for this feature:

BLAST of MC01g0164 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g0164 vs. NCBI nr


Match Name	E-value	Identity	Description
CAB4269449.1	2.40e-66	78.46	unnamed protein product [Prunus armeniaca] >CAB4284031.1 unnamed protein product...	[more]
KAG6618057.1	6.87e-66	78.46	hypothetical protein I3842_Q128200 [Carya illinoinensis]	[more]
KAF3952863.1	5.29e-65	78.46	hypothetical protein CMV_021630 [Castanea mollissima]	[more]
KAB1210637.1	5.64e-65	78.46	hypothetical protein CJ030_MR6G010321 [Morella rubra] >KAB1226196.1 hypothetical...	[more]
PLY71578.1	2.30e-64	78.29	hypothetical protein LSAT_1X88180 [Lactuca sativa] >PLY72081.1 hypothetical prot...	[more]

BLAST of MC01g0164 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J5XQ66	1.16e-66	78.46	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS15013 PE=4 S...	[more]
A0A2N9HQ72	2.73e-65	78.46	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40355 PE=4 SV=1	[more]
A0A6A1VFM0	2.73e-65	78.46	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR1G029169 PE=4 SV=1	[more]
A0A7N2N6W3	2.73e-65	78.46	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2J6KAH1	1.11e-64	78.29	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_1X88180 PE=4 SV=1	[more]

BLAST of MC01g0164 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0164.1	MC01g0164.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion