MC01g0159 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGTCGGAGAACTGCGTTTCGGAGATTCTGTCACTAACAACACCGTCGGACGCCTAAAGATTGGCCGCGGCGTTCCAGTCAGCGCCGGTATCCGACGACGTTTGTGGGAGATTCTTGTCCATAAACTACGTCTGGCCGCCTCTGAAATCTCCGACGAGACCCACATTTTCTTTGAGGAGAGAAATTTTCTTTCAATTCGGCTCTCCGCCCCTCCTTGACGGTGGTAAAAAGGTAATAATTAATAAAATCAACTCCATAAACAAATAAATTTGGATTTCTTTGAGTGATCAAATATTTAATAAATATATATAAACAATCTTGGGCAGAACCTTCGAGTTGGAAAAATTTTCTGGAAAGTTTTGTTACGTTTTGTCTACAACAGCACTGTCCATAAGTTGG TTGTCGGAGAACTGCGTTTCGGAGATTCTGTCACTAACAACACCGTCGGACGCCTAAAGATTGGCCGCGGCGTTCCAGTCAGCGCCGGTATCCGACGACGTTTGTGGGAGATTCTTGTCCATAAACTACGTCTGGCCGCCTCTGAAATCTCCGACGAGACCCACATTTTCTTTGAGGAGAGAAATTTTCTTTCAATTCGGCTCTCCGCCCCTCCTTGACGGTGGTAAAACCTTCGAGTTGGAAAAATTTTCTGGAAAGTTTTGTTACGTTTTGTCTACAACAGCACTGTCCATAAGTTGG TTGTCGGAGAACTGCGTTTCGGAGATTCTGTCACTAACAACACCGTCGGACGCCTAAAGATTGGCCGCGGCGTTCCAGTCAGCGCCGGTATCCGACGACGTTTGTGGGAGATTCTTGTCCATAAACTACGTCTGGCCGCCTCTGAAATCTCCGACGAGACCCACATTTTCTTTGAGGAGAGAAATTTTCTTTCAATTCGGCTCTCCGCCCCTCCTTGACGGTGGTAAAACCTTCGAGTTGGAAAAATTTTCTGGAAAGTTTTGTTACGTTTTGTCTACAACAGCACTGTCCATAAGTTGG LSENCVSEILSLTTPSDAURLAAAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGKTFELEKFSGKFCYVLSTTALSISW Homology
BLAST of MC01g0159 vs. ExPASy Swiss-Prot
Match: Q949S5 (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.8e-11 Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 0
BLAST of MC01g0159 vs. ExPASy Swiss-Prot
Match: Q9FV02 (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 3.6e-11 Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of MC01g0159 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 1.0e-10 Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of MC01g0159 vs. ExPASy Swiss-Prot
Match: Q570N1 (F-box protein PP2-B3 OS=Arabidopsis thaliana OX=3702 GN=PP2B3 PE=2 SV=2) HSP 1 Score: 66.2 bits (160), Expect = 2.3e-10 Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = 0
BLAST of MC01g0159 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.2e-10 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = 0
BLAST of MC01g0159 vs. NCBI nr
Match: XP_022156417.1 (F-box protein VBF-like [Momordica charantia]) HSP 1 Score: 97.4 bits (241), Expect = 6.52e-22 Identity = 61/105 (58.10%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of MC01g0159 vs. NCBI nr
Match: XP_022156423.1 (F-box protein VBF-like [Momordica charantia]) HSP 1 Score: 93.6 bits (231), Expect = 1.89e-20 Identity = 58/106 (54.72%), Postives = 66/106 (62.26%), Query Frame = 0
BLAST of MC01g0159 vs. NCBI nr
Match: KAG7021074.1 (F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 91.7 bits (226), Expect = 1.00e-19 Identity = 54/106 (50.94%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of MC01g0159 vs. NCBI nr
Match: XP_022937763.1 (F-box protein PP2-B15-like [Cucurbita moschata] >KAG6586239.1 F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 91.7 bits (226), Expect = 1.02e-19 Identity = 54/106 (50.94%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of MC01g0159 vs. NCBI nr
Match: XP_023537654.1 (F-box protein PP2-B15-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 89.4 bits (220), Expect = 7.27e-19 Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = 0
BLAST of MC01g0159 vs. ExPASy TrEMBL
Match: A0A6J1DS06 (F-box protein VBF-like OS=Momordica charantia OX=3673 GN=LOC111023312 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.16e-22 Identity = 61/105 (58.10%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of MC01g0159 vs. ExPASy TrEMBL
Match: A0A6J1DQK9 (F-box protein VBF-like OS=Momordica charantia OX=3673 GN=LOC111023316 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 9.17e-21 Identity = 58/106 (54.72%), Postives = 66/106 (62.26%), Query Frame = 0
BLAST of MC01g0159 vs. ExPASy TrEMBL
Match: A0A6J1FGV3 (F-box protein PP2-B15-like OS=Cucurbita moschata OX=3662 GN=LOC111444065 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 4.92e-20 Identity = 54/106 (50.94%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of MC01g0159 vs. ExPASy TrEMBL
Match: A0A6J1KF36 (F-box protein PP2-B15-like OS=Cucurbita maxima OX=3661 GN=LOC111493739 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 9.62e-19 Identity = 53/106 (50.00%), Postives = 67/106 (63.21%), Query Frame = 0
BLAST of MC01g0159 vs. ExPASy TrEMBL
Match: A0A6J1G464 (F-box protein PP2-B15-like OS=Cucurbita moschata OX=3662 GN=LOC111450586 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.34e-18 Identity = 54/106 (50.94%), Postives = 67/106 (63.21%), Query Frame = 0
BLAST of MC01g0159 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 ) HSP 1 Score: 69.3 bits (168), Expect = 2.0e-12 Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 0
BLAST of MC01g0159 vs. TAIR 10
Match: AT2G02250.1 (phloem protein 2-B2 ) HSP 1 Score: 67.4 bits (163), Expect = 7.5e-12 Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of MC01g0159 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein ) HSP 1 Score: 65.1 bits (157), Expect = 3.7e-11 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = 0
BLAST of MC01g0159 vs. TAIR 10
Match: AT1G09155.1 (phloem protein 2-B15 ) HSP 1 Score: 62.0 bits (149), Expect = 3.1e-10 Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 0
BLAST of MC01g0159 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 ) HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08 Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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