MC01g0146 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0146
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Myb_DNA-bind_3 domain-containing protein
Location	MC01: 7138500 .. 7138804 (+)
RNA-Seq Expression	MC01g0146
Synteny	MC01g0146

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGGACTAAAGAAAATGATGAGAAGTTGGTTGAATGTCTATTGGAGTTAGCAAATTCAAACCAATGACATTGTGATAATGGAACATTTAGATCAGGTTATCTACAACAAGTAGAGAAAATGATAAGTCAAAGTTGCCTGAATGTTAATGTTGACCTCATATAGATCAAAAGTTGAAACTATTGAAGAAATAATATAACGCAATTGCAGAAATGTTAGGGCCAAATTGTAGTGATTTTGGTTGGAATGAACCAGAAAAGTGTATTGATTGTTTGAAAGATGTATTTAATGATTGGGTCAAGGTA

mRNA sequence

TTTTGGACTAAAGAAAATGATGAGAAGTTGGTTGAATGTCTATTGGAGTTAGCAAATTCAAACCAATGACATTGTGATAATGGAACATTTAGATCAGGTTATCTACAACAAGTAGAGAAAATGATAAGTCAAAGTTGCCTGAATGTTAATGTTCCTCATATAGATCAAAAGTTGAAACTATTGAAGAAATAATATAACGCAATTGCAGAAATGTTAGGGCCAAATTGTAGTGATTTTGGTTGGAATGAACCAGAAAAGTGTATTGATTGTTTGAAAGATGTATTTAATGATTGGGTCAAGGTA

Coding sequence (CDS)

TTTTGGACTAAAGAAAATGATGAGAAGTTGGTTGAATGTCTATTGGAGTTAGCAAATTCAAACCAATGACATTGTGATAATGGAACATTTAGATCAGGTTATCTACAACAAGTAGAGAAAATGATAAGTCAAAGTTGCCTGAATGTTAATGTTCCTCATATAGATCAAAAGTTGAAACTATTGAAGAAATAATATAACGCAATTGCAGAAATGTTAGGGCCAAATTGTAGTGATTTTGGTTGGAATGAACCAGAAAAGTGTATTGATTGTTTGAAAGATGTATTTAATGATTGGGTCAAGGTA

Protein sequence

FWTKENDEKLVECLLELANSNQUHCDNGTFRSGYLQQVEKMISQSCLNVNVPHIDQKLKLLKKUYNAIAEMLGPNCSDFGWNEPEKCIDCLKDVFNDWVKV

Homology

[Close]

BLAST of MC01g0146 vs. NCBI nr
Match: CAD1829438.1 (unnamed protein product [Ananas comosus var. bracteatus])

HSP 1 Score: 129 bits (324), Expect = 2.28e-35
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 2   WTKENDEKLVECLLELANSNQXHCDNGTFRSGYLQQVEKMISQS---CLNVNVPHIDQKL 61
           WTK  DEKL+ECLL+L+NS Q   DNGTFR+GYLQQ+E+ + +    C    VPHI+ + 
Sbjct: 39  WTKHEDEKLIECLLDLSNSGQWRVDNGTFRNGYLQQLERWMHEKIPDCELKGVPHIESRF 98

Query: 62  KLLKKXYNAIAEMLGPNCSDFGWNEPEKCIDCLKDVFNDWVK 100
           KL K+ YNAI EMLGP+ S FGW++  KC++C K+V+++WVK
Sbjct: 99  KLWKRQYNAIFEMLGPSASGFGWSDKNKCVECDKNVYDNWVK 140

[Close]

BLAST of MC01g0146 vs. NCBI nr
Match: CAD1822766.1 (unnamed protein product [Ananas comosus var. bracteatus])

HSP 1 Score: 129 bits (323), Expect = 3.71e-35
Identity = 56/102 (54.90%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 2   WTKENDEKLVECLLELANSNQXHCDNGTFRSGYLQQVEKMISQS---CLNVNVPHIDQKL 61
           WTK  DEKL+ECLL+L+NS Q   DNGTFR+GYLQQ+E+ + +    C    VPHI+ + 
Sbjct: 44  WTKHEDEKLIECLLDLSNSRQWRADNGTFRNGYLQQLERWMHEKIPDCELKGVPHIESRF 103

Query: 62  KLLKKXYNAIAEMLGPNCSDFGWNEPEKCIDCLKDVFNDWVK 100
           KL K  YNAI EMLGP+ S FGW++  KC++C K+V+++WVK
Sbjct: 104 KLWKSQYNAIFEMLGPSASGFGWSDKNKCVECDKNVYDNWVK 145

[Close]

BLAST of MC01g0146 vs. NCBI nr
Match: CAD1831704.1 (unnamed protein product [Ananas comosus var. bracteatus])

HSP 1 Score: 131 bits (329), Expect = 8.55e-35
Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 2   WTKENDEKLVECLLELANSNQXHCDNGTFRSGYLQQVEKMISQ---SCLNVNVPHIDQKL 61
           WTKE DEKL+ECLLEL  S     DNGTFR+GYLQQ+EK + +    C    VPHI+ + 
Sbjct: 21  WTKEEDEKLIECLLELTTSGNWKADNGTFRNGYLQQLEKWMHERLPGCQLKGVPHIESRF 80

Query: 62  KLLKKXYNAIAEMLGPNCSDFGWNEPEKCIDCLKDVFNDWVK 100
           KL K+ YNAI+EMLGP  S FGWN+ EKCI C K VF+ WVK
Sbjct: 81  KLWKRQYNAISEMLGPAASGFGWNDAEKCIICEKTVFDAWVK 122

[Close]

BLAST of MC01g0146 vs. NCBI nr
Match: XP_020101017.1 (uncharacterized protein LOC109718933 isoform X2 [Ananas comosus] >XP_020101018.1 uncharacterized protein LOC109718933 isoform X2 [Ananas comosus])

HSP 1 Score: 129 bits (325), Expect = 9.23e-35
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 2   WTKENDEKLVECLLELANSNQXHCDNGTFRSGYLQQVEKMISQS---CLNVNVPHIDQKL 61
           WTK  DEKL+ECLL+L+NS Q   DNGTFR+GYLQQ+E+ + +    C    VPHI+ + 
Sbjct: 21  WTKHEDEKLIECLLDLSNSGQWRADNGTFRNGYLQQLERWMHEKIPDCELKGVPHIESRF 80

Query: 62  KLLKKXYNAIAEMLGPNCSDFGWNEPEKCIDCLKDVFNDWVK 100
           KL K+ YNAI EMLGP+ S FGW++  KC++C K+V+++WVK
Sbjct: 81  KLWKRQYNAIFEMLGPSASGFGWSDKNKCVECDKNVYDNWVK 122

[Close]

BLAST of MC01g0146 vs. NCBI nr
Match: XP_020101014.1 (uncharacterized protein LOC109718933 isoform X1 [Ananas comosus] >XP_020101016.1 uncharacterized protein LOC109718933 isoform X1 [Ananas comosus])

HSP 1 Score: 129 bits (325), Expect = 1.57e-34
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 2   WTKENDEKLVECLLELANSNQXHCDNGTFRSGYLQQVEKMISQS---CLNVNVPHIDQKL 61
           WTK  DEKL+ECLL+L+NS Q   DNGTFR+GYLQQ+E+ + +    C    VPHI+ + 
Sbjct: 43  WTKHEDEKLIECLLDLSNSGQWRADNGTFRNGYLQQLERWMHEKIPDCELKGVPHIESRF 102

Query: 62  KLLKKXYNAIAEMLGPNCSDFGWNEPEKCIDCLKDVFNDWVK 100
           KL K+ YNAI EMLGP+ S FGW++  KC++C K+V+++WVK
Sbjct: 103 KLWKRQYNAIFEMLGPSASGFGWSDKNKCVECDKNVYDNWVK 144

[Close]

BLAST of MC01g0146 vs. ExPASy TrEMBL
Match: A0A6V7PFT9 (Myb_DNA-bind_3 domain-containing protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS12649 PE=4 SV=1)

HSP 1 Score: 129 bits (324), Expect = 1.10e-35
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 2   WTKENDEKLVECLLELANSNQXHCDNGTFRSGYLQQVEKMISQS---CLNVNVPHIDQKL 61
           WTK  DEKL+ECLL+L+NS Q   DNGTFR+GYLQQ+E+ + +    C    VPHI+ + 
Sbjct: 39  WTKHEDEKLIECLLDLSNSGQWRVDNGTFRNGYLQQLERWMHEKIPDCELKGVPHIESRF 98

Query: 62  KLLKKXYNAIAEMLGPNCSDFGWNEPEKCIDCLKDVFNDWVK 100
           KL K+ YNAI EMLGP+ S FGW++  KC++C K+V+++WVK
Sbjct: 99  KLWKRQYNAIFEMLGPSASGFGWSDKNKCVECDKNVYDNWVK 140

[Close]

BLAST of MC01g0146 vs. ExPASy TrEMBL
Match: A0A6V7NWK1 (Myb_DNA-bind_3 domain-containing protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS5977 PE=4 SV=1)

HSP 1 Score: 129 bits (323), Expect = 1.80e-35
Identity = 56/102 (54.90%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 2   WTKENDEKLVECLLELANSNQXHCDNGTFRSGYLQQVEKMISQS---CLNVNVPHIDQKL 61
           WTK  DEKL+ECLL+L+NS Q   DNGTFR+GYLQQ+E+ + +    C    VPHI+ + 
Sbjct: 44  WTKHEDEKLIECLLDLSNSRQWRADNGTFRNGYLQQLERWMHEKIPDCELKGVPHIESRF 103

Query: 62  KLLKKXYNAIAEMLGPNCSDFGWNEPEKCIDCLKDVFNDWVK 100
           KL K  YNAI EMLGP+ S FGW++  KC++C K+V+++WVK
Sbjct: 104 KLWKSQYNAIFEMLGPSASGFGWSDKNKCVECDKNVYDNWVK 145

[Close]

BLAST of MC01g0146 vs. ExPASy TrEMBL
Match: A0A6V7PLJ8 (Myb_DNA-bind_3 domain-containing protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS14915 PE=4 SV=1)

HSP 1 Score: 131 bits (329), Expect = 4.14e-35
Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 2   WTKENDEKLVECLLELANSNQXHCDNGTFRSGYLQQVEKMISQ---SCLNVNVPHIDQKL 61
           WTKE DEKL+ECLLEL  S     DNGTFR+GYLQQ+EK + +    C    VPHI+ + 
Sbjct: 21  WTKEEDEKLIECLLELTTSGNWKADNGTFRNGYLQQLEKWMHERLPGCQLKGVPHIESRF 80

Query: 62  KLLKKXYNAIAEMLGPNCSDFGWNEPEKCIDCLKDVFNDWVK 100
           KL K+ YNAI+EMLGP  S FGWN+ EKCI C K VF+ WVK
Sbjct: 81  KLWKRQYNAISEMLGPAASGFGWNDAEKCIICEKTVFDAWVK 122

[Close]

BLAST of MC01g0146 vs. ExPASy TrEMBL
Match: A0A6P5G5H8 (uncharacterized protein LOC109718933 isoform X2 OS=Ananas comosus OX=4615 GN=LOC109718933 PE=4 SV=1)

HSP 1 Score: 129 bits (325), Expect = 4.47e-35
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 2   WTKENDEKLVECLLELANSNQXHCDNGTFRSGYLQQVEKMISQS---CLNVNVPHIDQKL 61
           WTK  DEKL+ECLL+L+NS Q   DNGTFR+GYLQQ+E+ + +    C    VPHI+ + 
Sbjct: 21  WTKHEDEKLIECLLDLSNSGQWRADNGTFRNGYLQQLERWMHEKIPDCELKGVPHIESRF 80

Query: 62  KLLKKXYNAIAEMLGPNCSDFGWNEPEKCIDCLKDVFNDWVK 100
           KL K+ YNAI EMLGP+ S FGW++  KC++C K+V+++WVK
Sbjct: 81  KLWKRQYNAIFEMLGPSASGFGWSDKNKCVECDKNVYDNWVK 122

[Close]

BLAST of MC01g0146 vs. ExPASy TrEMBL
Match: A0A6P5FXE5 (uncharacterized protein LOC109718933 isoform X1 OS=Ananas comosus OX=4615 GN=LOC109718933 PE=4 SV=1)

HSP 1 Score: 129 bits (325), Expect = 7.60e-35
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 2   WTKENDEKLVECLLELANSNQXHCDNGTFRSGYLQQVEKMISQS---CLNVNVPHIDQKL 61
           WTK  DEKL+ECLL+L+NS Q   DNGTFR+GYLQQ+E+ + +    C    VPHI+ + 
Sbjct: 43  WTKHEDEKLIECLLDLSNSGQWRADNGTFRNGYLQQLERWMHEKIPDCELKGVPHIESRF 102

Query: 62  KLLKKXYNAIAEMLGPNCSDFGWNEPEKCIDCLKDVFNDWVK 100
           KL K+ YNAI EMLGP+ S FGW++  KC++C K+V+++WVK
Sbjct: 103 KLWKRQYNAIFEMLGPSASGFGWSDKNKCVECDKNVYDNWVK 144

The following BLAST results are available for this feature:

BLAST of MC01g0146 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g0146 vs. NCBI nr


Match Name	E-value	Identity	Description
CAD1829438.1	2.28e-35	54.90	unnamed protein product [Ananas comosus var. bracteatus]	[more]
CAD1822766.1	3.71e-35	54.90	unnamed protein product [Ananas comosus var. bracteatus]	[more]
CAD1831704.1	8.55e-35	59.80	unnamed protein product [Ananas comosus var. bracteatus]	[more]
XP_020101017.1	9.23e-35	54.90	uncharacterized protein LOC109718933 isoform X2 [Ananas comosus] >XP_020101018.1...	[more]
XP_020101014.1	1.57e-34	54.90	uncharacterized protein LOC109718933 isoform X1 [Ananas comosus] >XP_020101016.1...	[more]

BLAST of MC01g0146 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6V7PFT9	1.10e-35	54.90	Myb_DNA-bind_3 domain-containing protein OS=Ananas comosus var. bracteatus OX=29...	[more]
A0A6V7NWK1	1.80e-35	54.90	Myb_DNA-bind_3 domain-containing protein OS=Ananas comosus var. bracteatus OX=29...	[more]
A0A6V7PLJ8	4.14e-35	59.80	Myb_DNA-bind_3 domain-containing protein OS=Ananas comosus var. bracteatus OX=29...	[more]
A0A6P5G5H8	4.47e-35	54.90	uncharacterized protein LOC109718933 isoform X2 OS=Ananas comosus OX=4615 GN=LOC...	[more]
A0A6P5FXE5	7.60e-35	54.90	uncharacterized protein LOC109718933 isoform X1 OS=Ananas comosus OX=4615 GN=LOC...	[more]

BLAST of MC01g0146 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 2..93 e-value: 1.2E-7 score: 32.6
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 2..98
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 2..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0146.1	MC01g0146.1	mRNA