MC01g0031 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g0031
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	thioredoxin-like 3-1, chloroplastic
Location	MC01: 2163265 .. 2166936 (-)
RNA-Seq Expression	MC01g0031
Synteny	MC01g0031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTAGAATTTTCAATATTTAGATCACAAAATTTAAAAAAATATATATATAAAAATAAAAAATAAAAAACAAATGTGCGTTAAAATGAGTATAATAAAATGCTGGGTCCGCAGTCACCTCCATTCCCACGTGTGGCCCACACGTGCTCGGCCTTCCTTCCAATCCCCATCTCTCAGTCTCACCTTCCGGATAAGCCCTTAAAAAACTCTCCTCTCCCATCCAAAACTCGGAAGCCCCAACAAAAAAAAAAAAAGAAAAAACAAAGAAAATAGAAAATGATTCCCTGAAATCTAGAGAGAGAAAAAATAGAGAAGAGGAGAGAGAAATGTCTATTTTGGCGGCCAGTTCTCAGATTGTGTACCGAGAAGTTCACCACAGAGATCCGCAGCAAATTGCGAGCACTGGGAGTGGGAACTGCTGTTTCGTGAACACAAATTGTGGGTCCCCATTATTCCATCGGAGAATTCAAGATCGCCGGAGAGAGTTGAGGGCGGAGGCCGGATTCTGGCCGGACTTGTCCCGCCCCGCGGCGGAGGAGATGGCGCCCATCCACGATTCCGACCACCTCGATCGGATTTTGCTGCAGGCGCGGGACCAATCTCAACCCGTACTTATCGATTGGTTCGTATTTTCTGCCCATCTCTAATTTCTTCTATTTTATTTTTTTATAATTCTTTTTGGCATTAATTATCGATTCGATTAAAATGTGGCTGTGGTCAATTCAGTTCCGCTGGATAGGGTTGCTGAAAAGAGTTCGATTAATTCTCTTTCTAACTTTTTTCTCTCCCAGTCGGGGTTTTTTAAAAAAAATAAAAAAATAAAAATTCGAATAAGTACTTTTCTTAAAGTAGTAGGCTCAAACTATGTGAGATGCATCTTCAGCTAAAATCATAATATAATTATTTAATATTTTTATCTAATAGAAAACATGAGTTTGGCTCAGCAAATATCTCTATCTTGTACTAAAAAAAATGTCAGGATGATTTATGAAATTTTACTAAATAATATGGATCAAATTAAAGTTTTTTGTGACCACCACCAGTGACGGTGAAATTTGACGGAGAAGAGGAAAAGTGTGGGAGTCCAATTAAGAAAGAAGTATTATTAAATTAATATATTTGTCAAGTAAGTAATATACTGTCATATTTTTATACTATTGGTCATCAACAAATGGTCAAAGAAGTTCAAGAACAGTTTAGAACAATTTTTATAAATTTGAAGGATTAAAGTACCTTTTTTGAAACATCATATAGAAAATAGACGTGAACTACTCTAAATCTGAAACATAAAAGTATATTTTTCCTTGTATAATTTAAAATTTAGGACATAAATAACATTTTACATATTGGATGGATTAAATTTAGTTTATTTTTTATCCATTAATGTAAATCTAAATTCCCAATAACAGTAATAATAACCTAATCTATTTTTCTTTGCCTCGACTTAGGGATATTTTGTTCATTTTCTTTATTTTTAATTAAAAATAAAAACAATGAATTCTACTGGCACATCAAATTCATGTTTCACTTTTATAAACTGGTTTTCGAGATAATTTTAAAAATTATTATTTCCAAGACATCTCTTTAAGGTAATTCCTTTAAGTCCTCTTTGAAAACATAATTTTCATTCTTTTTTATCAACAATTCTTAACCTCATTTTGGTTCCAAACTTTTTAGACTTTCAACTTTGGAAAATATTTATTTCAGTTCCTAAACTTCTAGATTTTTAGATTTTTTTTAGACTGATAAACGTGTAAAATACTTTTGCTAGAATTACTTTAGTTTTAGTTCTTAAATTTTAAAAAGTATCTATTTTTAACATTGTCATTAATTTAAAGGAACGAATGGCATGCATTTTTACCTAAGGCACAAATTGCAGCTATATTTATGGGTTGAGACTAAAAACAAAAATAATATATTTTTTTAATGTTTATAACTAAAATAAATATTTAATTATATTTTATTTATTTATTTATTTATTTATTTTGGGACAATAGGATGGCAACTTGGTGCAGGAAATGCATCTACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTACGTAGCCAAGTAACCTCTCTCTTCTACTCATTCCTAGAAATTAAATCTCTTCTTTAATTAGTTCATCCCTACAATTTTTTATCAACCTTTCATTTATTTATAATAATTAATGTTAGATTGCAAATTTAGTATGGTAACGAAGAAGGAAGGAGGAGCAATTGCACGTGCTTTTTTTTTTTTTTTAGTATAACACGACATGTGACGTGATTTAAATCCACGACCTTTTGGTTGGAATGTAGATATAGACTTTGTAGATTTTTCCAAATTTTTCCTCGATTTATAAAAAAAAAAAAAACCACATTTACTTGTAATTATTTTTTGAAGAATCATTTAAAGTTGATTCTATCCCGTACTAATTATATTATATTCGTATTTATACTTACACTTTTTCTTCTATTTTTTGTCAATAAATTACTAAATTTTCTCAGAGCGAAATTCTACTATGTGGACGTGAATAAGGTCCCTCAATCTCTAGTGAAACGTGGAAACATCTCTGTAAGTGTACTCTAAAACCCCATTTTGAGTTCTTGAAATCCTTTCTTTTCTAGTTATGTAGTTTGACAATTCATATTTCCTTTTTTTTTCTCATCTTGTGCAGAAAATGCCAACAATTCAGGTGACCACTTTTAATTTGGTTGTTTTGATATTAGGGTGTGTTTGAGAGTGATTTTAGCGTAGCCAAAATCACTTTTCTCATTGTCAAAATCACTTCCCTCGCTATTGATCATGTTTGGTAAATTAGAGCGTGTTTGGGAGTGAAGATAGAAGGAGTGATTTTAGAAAAAAGAATATTTAAGAATAAAAGTCAATTTAAAGTGATTTTGAATTTTCTTAAAATGCATTTTTTAATTTGTCATTGTCAAAATCACTTCCAAACACACATCCTTAAGCTGTATTTGAAAATGCTTCTAGAATAATAGTAAGTTTTCAATGATTTCCACGACAGTGTTTTTAAGTGAACACTTTTATTATAACTTGTAATAGAAACAATGCTTTTGTGCTATATTTTAAAGTAATTTTAAGGGTGTATTTGGAAATTATTTTAAAGTATTTTAAGCCAAAGTAATATGATCATGCACAACTTAGTAAAAAGTGTTTAATAATGAAGAATTTCGCTGTTTGATTTCACTCAGAAGTATTTTTTTTTTCCTTGACACAAAATGAAGGTTTATTTATTTATTTGTGTTATCCAAAAATCATTTCTTCCAAGAGCACTCTATACTTTTTTATGTTACCCCGAACATGATGATTTTTAGTGACCACAATCAACTTCAAAGCCAAGTTTACTTGTCTTCGGAATTTGAGAAATCACTTTAGGTTATTAAACTAAACAGTATGAAATTAAATTACTAAAGTAATTTTAGCAAAAGTATTTTACACGTTTATCAGTTATTCCCCGATTGAAAGAGAAAGCTTTTGATTATCGCAAAGTACCCACCGTAACTTTTATAGCTTTCGATTGTCGAAAGAATTACGAATGAGTTCGTAATTTTTTAAAATTATTTTTTAGCTTTGGAAGGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAGGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCAAAAGTTTGTTTCA

mRNA sequence

CTTCTAGAATTTTCAATATTTAGATCACAAAATTTAAAAAAATATATATATAAAAATAAAAAATAAAAAACAAATGTGCGTTAAAATGAGTATAATAAAATGCTGGGTCCGCAGTCACCTCCATTCCCACGTGTGGCCCACACGTGCTCGGCCTTCCTTCCAATCCCCATCTCTCAGTCTCACCTTCCGGATAAGCCCTTAAAAAACTCTCCTCTCCCATCCAAAACTCGGAAGCCCCAACAAAAAAAAAAAAAGAAAAAACAAAGAAAATAGAAAATGATTCCCTGAAATCTAGAGAGAGAAAAAATAGAGAAGAGGAGAGAGAAATGTCTATTTTGGCGGCCAGTTCTCAGATTGTGTACCGAGAAGTTCACCACAGAGATCCGCAGCAAATTGCGAGCACTGGGAGTGGGAACTGCTGTTTCGTGAACACAAATTGTGGGTCCCCATTATTCCATCGGAGAATTCAAGATCGCCGGAGAGAGTTGAGGGCGGAGGCCGGATTCTGGCCGGACTTGTCCCGCCCCGCGGCGGAGGAGATGGCGCCCATCCACGATTCCGACCACCTCGATCGGATTTTGCTGCAGGCGCGGGACCAATCTCAACCCGTACTTATCGATTGGATGGCAACTTGGTGCAGGAAATGCATCTACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTACGTAGCCAAAGCGAAATTCTACTATGTGGACGTGAATAAGGTCCCTCAATCTCTAGTGAAACGTGGAAACATCTCTAAAATGCCAACAATTCAGCTTTGGAAGGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAGGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCAAAAGTTTGTTTCA

Coding sequence (CDS)

ATGTCTATTTTGGCGGCCAGTTCTCAGATTGTGTACCGAGAAGTTCACCACAGAGATCCGCAGCAAATTGCGAGCACTGGGAGTGGGAACTGCTGTTTCGTGAACACAAATTGTGGGTCCCCATTATTCCATCGGAGAATTCAAGATCGCCGGAGAGAGTTGAGGGCGGAGGCCGGATTCTGGCCGGACTTGTCCCGCCCCGCGGCGGAGGAGATGGCGCCCATCCACGATTCCGACCACCTCGATCGGATTTTGCTGCAGGCGCGGGACCAATCTCAACCCGTACTTATCGATTGGATGGCAACTTGGTGCAGGAAATGCATCTACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTACGTAGCCAAAGCGAAATTCTACTATGTGGACGTGAATAAGGTCCCTCAATCTCTAGTGAAACGTGGAAACATCTCTAAAATGCCAACAATTCAGCTTTGGAAGGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAGGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCAAAAGTTTGTTTCA

Protein sequence

MSILAASSQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRRELRAEAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFVS

Homology

[Close]

BLAST of MC01g0031 vs. ExPASy Swiss-Prot
Match: Q9FG36 (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 207.2 bits (526), Expect = 1.6e-52
Identity = 104/188 (55.32%), Postives = 134/188 (71.28%), Query Frame = 0


Query: 1   MSILAASSQIVYREVHHRDPQQIASTGSGN----CCFVNTNCGSPLFHRRIQDRRRELRA 60
           M+ LA++ Q++ R+ H    +Q+    S N    C F  +   +    R   ++   L+A
Sbjct: 26  MAALASNPQMLTRQAHGNKKEQLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA 85

Query: 61  EAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEK 120
              FW ++++P   EM PI++ + LD +L  AR  SQP++I+WMA+WCRKCIYLKPKLEK
Sbjct: 86  ---FWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEK 145

Query: 121 LAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEV 180
           LAA+Y  +AKFYYVDVNKVPQ+LVKRGNISKMPTIQLWK+ EMK EVIGGHK WLVIEEV
Sbjct: 146 LAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEV 205

Query: 181 REMIQKFV 185
           RE+I KFV
Sbjct: 206 RELINKFV 210

[Close]

BLAST of MC01g0031 vs. ExPASy Swiss-Prot
Match: Q6Z7L3 (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-43
Identity = 89/138 (64.49%), Postives = 108/138 (78.26%), Query Frame = 0


Query: 50  RRRE-----LRAEAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWC 109
           RRRE     LRAEA FW D+S+P   EM  I   + LD  L  + +  QP++IDWMA+WC
Sbjct: 58  RRRERGDGMLRAEAYFW-DVSKPV--EMEEIDSMEKLDDALRWSVENKQPIIIDWMASWC 117

Query: 110 RKCIYLKPKLEKLAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVI 169
           RKCIYLKP+LEK+A ++    +FY+VDVNKVPQ++VKRGNI+KMPTIQLWKDGE  AEVI
Sbjct: 118 RKCIYLKPRLEKIAGEFPG-VRFYFVDVNKVPQTVVKRGNITKMPTIQLWKDGEWAAEVI 177

Query: 170 GGHKAWLVIEEVREMIQK 183
           GGHKAWLV++EVREMIQK
Sbjct: 178 GGHKAWLVMDEVREMIQK 191

[Close]

BLAST of MC01g0031 vs. ExPASy Swiss-Prot
Match: Q8VZT6 (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.7e-35
Identity = 66/115 (57.39%), Postives = 86/115 (74.78%), Query Frame = 0


Query: 67  PAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAADYVAKAK 126
           P + E+ PI    H D+++  A+   + V+I WMA WCRKCIYLKPKLEKLAA++  + +
Sbjct: 73  PVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLR 132

Query: 127 FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQ 182
           FY+VDVN VP  LV R  ++KMPTIQLW+DG+ +AEVIGGHKA  V+ EVREMI+
Sbjct: 133 FYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIE 187

[Close]

BLAST of MC01g0031 vs. ExPASy Swiss-Prot
Match: Q1RQJ1 (Thioredoxin Asp f 28 OS=Neosartorya fumigata OX=746128 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.3e-10
Identity = 38/99 (38.38%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 84  ILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAADYVAKAKFYYVDVNKVPQSLVKRG 143
           I+ +A   S PV++D+ ATWC  C  + PK+ +L+  Y +  +F  VDV+KV +S+    
Sbjct: 13  IIYKALTSSGPVVVDFFATWCGPCRAVAPKVGELSEKY-SNVRFIQVDVDKV-RSVAHEM 72

Query: 144 NISKMPTIQLWKDGE-MKAEVIGGHKAWLVIEEVREMIQ 182
           NI  MPT  L+KDG+ ++  V+GG+     + E+ EMI+
Sbjct: 73  NIRAMPTFVLYKDGQPLEKRVVGGN-----VRELEEMIK 104

[Close]

BLAST of MC01g0031 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-09
Identity = 35/117 (29.91%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 68  AAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAADYVAKAKF 127
           AA E+  + DS+   ++L    +   PVL+++ A WC  C  + P +++LA D+  K KF
Sbjct: 84  AAVEVPNLSDSEWQTKVL----ESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKF 143

Query: 128 YYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFV 185
           Y ++ ++ P +   R  I  +PT+ ++K GE K  +IG     +  E + + I++F+
Sbjct: 144 YKINTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIGA----VPRETLEKTIERFL 191

[Close]

BLAST of MC01g0031 vs. NCBI nr
Match: XP_022159159.1 (thioredoxin-like 3-1, chloroplastic [Momordica charantia])

HSP 1 Score: 386 bits (991), Expect = 1.80e-135
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MSILAASSQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRRELRAEAGF 60
           MSILAASSQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRRELRAEAGF
Sbjct: 1   MSILAASSQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRRELRAEAGF 60

Query: 61  WPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAAD 120
           WPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAAD
Sbjct: 61  WPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAAD 120

Query: 121 YVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI 180
           YVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI
Sbjct: 121 YVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI 180

Query: 181 QKFVS 185
           QKFVS
Sbjct: 181 QKFVS 185

[Close]

BLAST of MC01g0031 vs. NCBI nr
Match: XP_023517975.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276 bits (705), Expect = 8.10e-92
Identity = 144/191 (75.39%), Postives = 155/191 (81.15%), Query Frame = 0


Query: 1   MSILAASS-QIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRRELR---- 60
           MS+LAA++ QI+Y EVHH    QI S G G  CFVN + GS LF RR  +RRR  R    
Sbjct: 1   MSVLAATTAQILYSEVHHNQ-HQIPSNG-GRRCFVNRDFGSVLFGRRNGERRRLRRREFR 60

Query: 61  --AEAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPK 120
              EAGFWPDLSRPA  EM  I DS+ LDRIL  A++ SQPVLIDWMATWCRKCIYLKPK
Sbjct: 61  MGTEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPK 120

Query: 121 LEKLAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 180
           LEKLAADY+ KAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI
Sbjct: 121 LEKLAADYLTKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 180

Query: 181 EEVREMIQKFV 184
           EEV+EMIQKFV
Sbjct: 181 EEVKEMIQKFV 189

[Close]

BLAST of MC01g0031 vs. NCBI nr
Match: XP_038883417.1 (thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 273 bits (698), Expect = 6.47e-91
Identity = 144/188 (76.60%), Postives = 154/188 (81.91%), Query Frame = 0


Query: 1   MSILAA-SSQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRRELR--AE 60
           MS+L A SSQI+YR++H     QI STG    CF+NT+ G          RRRELR  AE
Sbjct: 1   MSVLGANSSQILYRQLHQH---QILSTGKR--CFLNTDFGLLG-----DQRRRELRIKAE 60

Query: 61  AGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKL 120
           AGFWPDLSRPAA EM  I DSDHLDRIL+ ++  SQP+LIDWMATWCRKCIYLKPKLEKL
Sbjct: 61  AGFWPDLSRPAAVEMESIDDSDHLDRILIHSQQLSQPILIDWMATWCRKCIYLKPKLEKL 120

Query: 121 AADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVR 180
           AADYV K KFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVR
Sbjct: 121 AADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVR 178

Query: 181 EMIQKFVS 185
           EMIQKFVS
Sbjct: 181 EMIQKFVS 178

[Close]

BLAST of MC01g0031 vs. NCBI nr
Match: KAG6595600.1 (Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273 bits (698), Expect = 9.75e-91
Identity = 141/191 (73.82%), Postives = 154/191 (80.63%), Query Frame = 0


Query: 1   MSILAASS-QIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRR------E 60
           MS+LAA++ QI+Y EVHH    QI S G G  CFVN + GS LF RR  +RRR      +
Sbjct: 1   MSVLAATTAQILYSEVHHNQ-HQIPSNG-GRRCFVNRDFGSVLFGRRNGERRRLRRRELK 60

Query: 61  LRAEAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPK 120
           +  EAGFWPDLSRPA  EM  I DS+ LDRIL  A++ SQPVLIDWMATWCRKCIYLKPK
Sbjct: 61  MGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPK 120

Query: 121 LEKLAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 180
           LEKLAADY+ K KFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI
Sbjct: 121 LEKLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 180

Query: 181 EEVREMIQKFV 184
           EEVREMI KF+
Sbjct: 181 EEVREMIHKFI 189

[Close]

BLAST of MC01g0031 vs. NCBI nr
Match: XP_022966464.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 273 bits (697), Expect = 1.38e-90
Identity = 143/191 (74.87%), Postives = 154/191 (80.63%), Query Frame = 0


Query: 1   MSILAASS-QIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQD----RRRELR 60
           MS+LAAS+ QI+Y EVHH    QIAS G+  C FVN + GS LF RR  +    RRRE R
Sbjct: 1   MSVLAASTAQILYSEVHHNQ-HQIASNGARRC-FVNRDFGSVLFGRRNGEQRRLRRREFR 60

Query: 61  --AEAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPK 120
              EAGFWPDLSRPA  EM  I DS+ LDRIL  A++ SQPVLIDWMATWCRKCIYLKPK
Sbjct: 61  MGTEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPK 120

Query: 121 LEKLAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 180
           LEKL ADY+ K KFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI
Sbjct: 121 LEKLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 180

Query: 181 EEVREMIQKFV 184
           EEVREMI KF+
Sbjct: 181 EEVREMIHKFI 189

[Close]

BLAST of MC01g0031 vs. ExPASy TrEMBL
Match: A0A6J1E1K1 (thioredoxin-like 3-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025584 PE=4 SV=1)

HSP 1 Score: 386 bits (991), Expect = 8.71e-136
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MSILAASSQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRRELRAEAGF 60
           MSILAASSQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRRELRAEAGF
Sbjct: 1   MSILAASSQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRRELRAEAGF 60

Query: 61  WPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAAD 120
           WPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAAD
Sbjct: 61  WPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAAD 120

Query: 121 YVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI 180
           YVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI
Sbjct: 121 YVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI 180

Query: 181 QKFVS 185
           QKFVS
Sbjct: 181 QKFVS 185

[Close]

BLAST of MC01g0031 vs. ExPASy TrEMBL
Match: A0A6J1HTV8 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 PE=4 SV=1)

HSP 1 Score: 273 bits (697), Expect = 6.70e-91
Identity = 143/191 (74.87%), Postives = 154/191 (80.63%), Query Frame = 0


Query: 1   MSILAASS-QIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQD----RRRELR 60
           MS+LAAS+ QI+Y EVHH    QIAS G+  C FVN + GS LF RR  +    RRRE R
Sbjct: 1   MSVLAASTAQILYSEVHHNQ-HQIASNGARRC-FVNRDFGSVLFGRRNGEQRRLRRREFR 60

Query: 61  --AEAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPK 120
              EAGFWPDLSRPA  EM  I DS+ LDRIL  A++ SQPVLIDWMATWCRKCIYLKPK
Sbjct: 61  MGTEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPK 120

Query: 121 LEKLAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 180
           LEKL ADY+ K KFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI
Sbjct: 121 LEKLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 180

Query: 181 EEVREMIQKFV 184
           EEVREMI KF+
Sbjct: 181 EEVREMIHKFI 189

[Close]

BLAST of MC01g0031 vs. ExPASy TrEMBL
Match: A0A6J1EDU4 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432326 PE=4 SV=1)

HSP 1 Score: 271 bits (694), Expect = 1.92e-90
Identity = 140/191 (73.30%), Postives = 153/191 (80.10%), Query Frame = 0


Query: 1   MSILAASS-QIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRR------E 60
           MS+LAA++ QI+Y E HH    QI S G G  CFVN + GS LF RR  +RRR      +
Sbjct: 1   MSVLAATTAQILYSEAHHNQ-HQIPSNG-GRRCFVNRDFGSVLFGRRNGERRRLRRRELK 60

Query: 61  LRAEAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPK 120
           +  EAGFWPDLSRPA  EM  I DS+ LDRIL  A++ SQPVLIDWMATWCRKCIYLKPK
Sbjct: 61  MGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPK 120

Query: 121 LEKLAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 180
           LEKLAADY+ K KFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI
Sbjct: 121 LEKLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 180

Query: 181 EEVREMIQKFV 184
           EEVREMI KF+
Sbjct: 181 EEVREMIHKFI 189

[Close]

BLAST of MC01g0031 vs. ExPASy TrEMBL
Match: A0A6J1A6W9 (thioredoxin-like 3-1, chloroplastic OS=Herrania umbratica OX=108875 GN=LOC110415209 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 1.92e-87
Identity = 134/189 (70.90%), Postives = 151/189 (79.89%), Query Frame = 0


Query: 1   MSILAASSQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQD-----RRRELR 60
           MS+LAA+SQI+YRE + RD QQ     +G+C  +  NCG   F RR         RR+ R
Sbjct: 1   MSVLAANSQILYREFYQRDQQQ-QLWNNGSCMLLQKNCGYFGFDRRNGKWKKNIARRDWR 60

Query: 61  AEAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLE 120
            EA  WPDLSRP+A EM PI+DSDHLD+ILL A++ SQP+LIDWMA WCRKCIYLKPKLE
Sbjct: 61  VEA-LWPDLSRPSAVEMEPINDSDHLDQILLGAQELSQPILIDWMAAWCRKCIYLKPKLE 120

Query: 121 KLAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180
           KLAA+Y  K KFYYVDVNKVPQSLVKRGNISKMPTIQ+WKDGEMK EVIGGHKAWLVIEE
Sbjct: 121 KLAAEYNTKIKFYYVDVNKVPQSLVKRGNISKMPTIQVWKDGEMKEEVIGGHKAWLVIEE 180

Query: 181 VREMIQKFV 184
           VR+MIQKFV
Sbjct: 181 VRQMIQKFV 187

[Close]

BLAST of MC01g0031 vs. ExPASy TrEMBL
Match: A0A1S3B504 (thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4 SV=1)

HSP 1 Score: 261 bits (667), Expect = 1.54e-86
Identity = 133/181 (73.48%), Postives = 145/181 (80.11%), Query Frame = 0


Query: 5   AASSQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRRELRAEAGFWPDL 64
           A+SS I+Y ++H     Q  S G   C F+NT+ G    HRR   R   ++AEAGFWPDL
Sbjct: 6   ASSSHILYAQLHQH---QFLSNGK-RCGFLNTDFGD---HRR---RELRIKAEAGFWPDL 65

Query: 65  SRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAADYVAK 124
           SRPA+ EM  I DSD LDRIL+ A+  SQP+LIDWMATWCRKCIYLKPKLEKLAADYV K
Sbjct: 66  SRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTK 125

Query: 125 AKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFV 184
            KFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKF 
Sbjct: 126 VKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFA 176

[Close]

BLAST of MC01g0031 vs. TAIR 10
Match: AT5G06690.1 (WCRKC thioredoxin 1 )

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-53
Identity = 104/188 (55.32%), Postives = 134/188 (71.28%), Query Frame = 0


Query: 1   MSILAASSQIVYREVHHRDPQQIASTGSGN----CCFVNTNCGSPLFHRRIQDRRRELRA 60
           M+ LA++ Q++ R+ H    +Q+    S N    C F  +   +    R   ++   L+A
Sbjct: 26  MAALASNPQMLTRQAHGNKKEQLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA 85

Query: 61  EAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEK 120
              FW ++++P   EM PI++ + LD +L  AR  SQP++I+WMA+WCRKCIYLKPKLEK
Sbjct: 86  ---FWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEK 145

Query: 121 LAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEV 180
           LAA+Y  +AKFYYVDVNKVPQ+LVKRGNISKMPTIQLWK+ EMK EVIGGHK WLVIEEV
Sbjct: 146 LAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEV 205

Query: 181 REMIQKFV 185
           RE+I KFV
Sbjct: 206 RELINKFV 210

[Close]

BLAST of MC01g0031 vs. TAIR 10
Match: AT5G04260.1 (WCRKC thioredoxin 2 )

HSP 1 Score: 148.3 bits (373), Expect = 6.2e-36
Identity = 66/115 (57.39%), Postives = 86/115 (74.78%), Query Frame = 0


Query: 67  PAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAADYVAKAK 126
           P + E+ PI    H D+++  A+   + V+I WMA WCRKCIYLKPKLEKLAA++  + +
Sbjct: 73  PVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLR 132

Query: 127 FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQ 182
           FY+VDVN VP  LV R  ++KMPTIQLW+DG+ +AEVIGGHKA  V+ EVREMI+
Sbjct: 133 FYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIE 187

[Close]

BLAST of MC01g0031 vs. TAIR 10
Match: AT5G06690.2 (WCRKC thioredoxin 1 )

HSP 1 Score: 141.0 bits (354), Expect = 9.8e-34
Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = 0


Query: 1   MSILAASSQIVYREVHHRDPQQIASTGSGN----CCFVNTNCGSPLFHRRIQDRRRELRA 60
           M+ LA++ Q++ R+ H    +Q+    S N    C F  +   +    R   ++   L+A
Sbjct: 26  MAALASNPQMLTRQAHGNKKEQLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA 85

Query: 61  EAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEK 120
              FW ++++P   EM PI++ + LD +L  AR  SQP++I+WMA+WCRKCIYLKPKLEK
Sbjct: 86  ---FWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEK 145

Query: 121 LAADYVAKAKFYYVDVNKVPQSLVKRGNIS 147
           LAA+Y  +AKFYYVDVNKVPQ+LVKRGNIS
Sbjct: 146 LAAEYNNRAKFYYVDVNKVPQTLVKRGNIS 172

[Close]

BLAST of MC01g0031 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-10
Identity = 35/117 (29.91%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 68  AAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKLAADYVAKAKF 127
           AA E+  + DS+   ++L    +   PVL+++ A WC  C  + P +++LA D+  K KF
Sbjct: 84  AAVEVPNLSDSEWQTKVL----ESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKF 143

Query: 128 YYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFV 185
           Y ++ ++ P +   R  I  +PT+ ++K GE K  +IG     +  E + + I++F+
Sbjct: 144 YKINTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIGA----VPRETLEKTIERFL 191

[Close]

BLAST of MC01g0031 vs. TAIR 10
Match: AT1G76760.1 (thioredoxin Y1 )

HSP 1 Score: 53.1 bits (126), Expect = 2.7e-07
Identity = 27/92 (29.35%), Postives = 48/92 (52.17%), Query Frame = 0


Query: 90  DQSQPVLIDWMATWCRKCIYLKPKLEKLAADYVAKAKFYYVDVNKVPQSLVKRGNISKMP 149
           +  +PVL+D+ ATWC  C ++ P L +++     K +   +D  K P S+  +  I  +P
Sbjct: 79  NSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYP-SIANKYKIEALP 138

Query: 150 TIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQ 182
           T  L+KDGE      G   A  +I+ + + ++
Sbjct: 139 TFILFKDGEPCDRFEGALTAKQLIQRIEDSLK 169

The following BLAST results are available for this feature:

BLAST of MC01g0031 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FG36	1.6e-52	55.32	Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE...	[more]
Q6Z7L3	3.0e-43	64.49	Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q8VZT6	8.7e-35	57.39	Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE...	[more]
Q1RQJ1	4.3e-10	38.38	Thioredoxin Asp f 28 OS=Neosartorya fumigata OX=746128 PE=1 SV=1	[more]
Q9SEU6	3.7e-09	29.91	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]

BLAST of MC01g0031 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159159.1	1.80e-135	100.00	thioredoxin-like 3-1, chloroplastic [Momordica charantia]	[more]
XP_023517975.1	8.10e-92	75.39	thioredoxin-like 3-1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038883417.1	6.47e-91	76.60	thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida]	[more]
KAG6595600.1	9.75e-91	73.82	Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022966464.1	1.38e-90	74.87	thioredoxin-like 3-1, chloroplastic [Cucurbita maxima]	[more]

BLAST of MC01g0031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1K1	8.71e-136	100.00	thioredoxin-like 3-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110255...	[more]
A0A6J1HTV8	6.70e-91	74.87	thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 ...	[more]
A0A6J1EDU4	1.92e-90	73.30	thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143232...	[more]
A0A6J1A6W9	1.92e-87	70.90	thioredoxin-like 3-1, chloroplastic OS=Herrania umbratica OX=108875 GN=LOC110415...	[more]
A0A1S3B504	1.54e-86	73.48	thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4...	[more]

BLAST of MC01g0031 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06690.1	1.1e-53	55.32	WCRKC thioredoxin 1	[more]
AT5G04260.1	6.2e-36	57.39	WCRKC thioredoxin 2	[more]
AT5G06690.2	9.8e-34	48.00	WCRKC thioredoxin 1	[more]
AT3G15360.1	2.6e-10	29.91	thioredoxin M-type 4	[more]
AT1G76760.1	2.7e-07	29.35	thioredoxin Y1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 68..183 e-value: 1.4E-21 score: 78.3
None	No IPR available	PANTHER	PTHR47192:SF3	THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC	coord: 1..184
None	No IPR available	CDD	cd02947	TRX_family	coord: 90..181 e-value: 1.24143E-21 score: 82.2208
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 90..169 e-value: 7.5E-17 score: 61.2
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 62..185 score: 11.138414
IPR044253	Thioredoxin-like 3-1/3-2	PANTHER	PTHR47192	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 1..184
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 58..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g0031.1	MC01g0031.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma