MC01g0028 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g0028
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionMyb-like domain-containing protein
LocationMC01: 2083442 .. 2083666 (-)
RNA-Seq ExpressionMC01g0028
SyntenyMC01g0028
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTACGGCCGCCGTTCACCGGGGCTTCAGTCGCCGCCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCAGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCTTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTC

mRNA sequence

TTACGGCCGCCGTTCACCGGGGCTTCAGTCGCCGCCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCAGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCTTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTC

Coding sequence (CDS)

TTACGGCCGCCGTTCACCGGGGCTTCAGTCGCCGCCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCAGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCTTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTC

Protein sequence

LRPPFTGASVAASPVIRSPTSLTFQHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPFCEEAPLLPKLRGYFAEF
Homology
[Close]
BLAST of MC01g0028 vs. NCBI nr
Match: EPS74531.1 (hypothetical protein M569_00248, partial [Genlisea aurea])

HSP 1 Score: 163 bits (412), Expect = 2.38e-50
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 1  LRPPFTGASVAASPVIRSPTSLTFQHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPFCE 60
          LRPPFTGASVA SPVIRSPTSLTF+HWAGVSPHTWSYDFAETCVFGKQSPGPGHCDP CE
Sbjct: 1  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60

Query: 61 EAPLLPKLRGYFAEF 75
          EAPLLPKLRGYFAEF
Sbjct: 61 EAPLLPKLRGYFAEF 75

[Close]
BLAST of MC01g0028 vs. NCBI nr
Match: PWA54452.1 (hypothetical protein CTI12_AA435150 [Artemisia annua])

HSP 1 Score: 163 bits (412), Expect = 4.71e-49
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 1   LRPPFTGASVAASPVIRSPTSLTFQHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPFCE 60
           LRPPFTGASVA SPVIRSPTSLTF+HWAGVSPHTWSYDFAETCVFGKQSPGPGHCDP CE
Sbjct: 107 LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 166

Query: 61  EAPLLPKLRGYFAEF 75
           EAPLLPKLRGYFAEF
Sbjct: 167 EAPLLPKLRGYFAEF 181

[Close]
BLAST of MC01g0028 vs. NCBI nr
Match: KAG6474749.1 (hypothetical protein ZIOFF_068688 [Zingiber officinale])

HSP 1 Score: 163 bits (412), Expect = 8.08e-47
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 1   LRPPFTGASVAASPVIRSPTSLTFQHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPFCE 60
           LRPPFTGASVA SPVIRSPTSLTF+HWAGVSPHTWSYDFAETCVFGKQSPGPGHCDP CE
Sbjct: 244 LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 303

Query: 61  EAPLLPKLRGYFAEF 75
           EAPLLPKLRGYFAEF
Sbjct: 304 EAPLLPKLRGYFAEF 318

[Close]
BLAST of MC01g0028 vs. NCBI nr
Match: KAG6483622.1 (hypothetical protein ZIOFF_060273 [Zingiber officinale])

HSP 1 Score: 163 bits (412), Expect = 4.39e-46
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 1   LRPPFTGASVAASPVIRSPTSLTFQHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPFCE 60
           LRPPFTGASVA SPVIRSPTSLTF+HWAGVSPHTWSYDFAETCVFGKQSPGPGHCDP CE
Sbjct: 40  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 99

Query: 61  EAPLLPKLRGYFAEF 75
           EAPLLPKLRGYFAEF
Sbjct: 100 EAPLLPKLRGYFAEF 114

[Close]
BLAST of MC01g0028 vs. NCBI nr
Match: XP_020999426.1 (uncharacterized protein LOC110281477 [Arachis duranensis])

HSP 1 Score: 154 bits (389), Expect = 1.38e-45
Identity = 68/75 (90.67%), Postives = 70/75 (93.33%), Query Frame = 0 

Query: 1   LRPPFTGASVAASPVIRSPTSLTFQHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPFCE 60
           L PPFTGASVA SPV+RSPTSLTF+HWAGVSPHTWSYDFAETCVFGKQSPGPGHCDP C 
Sbjct: 41  LLPPFTGASVAGSPVLRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCG 100

Query: 61  EAPLLPKLRGYFAEF 75
            APLLPKLRGYFAEF
Sbjct: 101 GAPLLPKLRGYFAEF 115

[Close]
BLAST of MC01g0028 vs. ExPASy TrEMBL
Match: S8DAJ4 (Uncharacterized protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_00248 PE=4 SV=1)

HSP 1 Score: 163 bits (412), Expect = 1.15e-50
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 1  LRPPFTGASVAASPVIRSPTSLTFQHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPFCE 60
          LRPPFTGASVA SPVIRSPTSLTF+HWAGVSPHTWSYDFAETCVFGKQSPGPGHCDP CE
Sbjct: 1  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 60

Query: 61 EAPLLPKLRGYFAEF 75
          EAPLLPKLRGYFAEF
Sbjct: 61 EAPLLPKLRGYFAEF 75

[Close]
BLAST of MC01g0028 vs. ExPASy TrEMBL
Match: A0A2U1LZL2 (Myb-like domain-containing protein OS=Artemisia annua OX=35608 GN=CTI12_AA435150 PE=4 SV=1)

HSP 1 Score: 163 bits (412), Expect = 2.28e-49
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 1   LRPPFTGASVAASPVIRSPTSLTFQHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPFCE 60
           LRPPFTGASVA SPVIRSPTSLTF+HWAGVSPHTWSYDFAETCVFGKQSPGPGHCDP CE
Sbjct: 107 LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE 166

Query: 61  EAPLLPKLRGYFAEF 75
           EAPLLPKLRGYFAEF
Sbjct: 167 EAPLLPKLRGYFAEF 181

[Close]
BLAST of MC01g0028 vs. ExPASy TrEMBL
Match: A0A6P5NU31 (uncharacterized protein LOC110281477 OS=Arachis duranensis OX=130453 GN=LOC110281477 PE=4 SV=1)

HSP 1 Score: 154 bits (389), Expect = 6.68e-46
Identity = 68/75 (90.67%), Postives = 70/75 (93.33%), Query Frame = 0 

Query: 1   LRPPFTGASVAASPVIRSPTSLTFQHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPFCE 60
           L PPFTGASVA SPV+RSPTSLTF+HWAGVSPHTWSYDFAETCVFGKQSPGPGHCDP C 
Sbjct: 41  LLPPFTGASVAGSPVLRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCG 100

Query: 61  EAPLLPKLRGYFAEF 75
            APLLPKLRGYFAEF
Sbjct: 101 GAPLLPKLRGYFAEF 115

[Close]
BLAST of MC01g0028 vs. ExPASy TrEMBL
Match: A0A427AP02 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00020298 PE=4 SV=1)

HSP 1 Score: 131 bits (330), Expect = 1.82e-37
Identity = 59/68 (86.76%), Postives = 60/68 (88.24%), Query Frame = 0 

Query: 8   ASVAASPVIRSPTSLTFQHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPFCEEAPLLPK 67
           A    SPVIRSPTSLTF+HWAGVSPHTWSYDFAET VFGKQSP PGH DP CEEAPLLPK
Sbjct: 34  AEFXGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETYVFGKQSPEPGHYDPLCEEAPLLPK 93

Query: 68  LRGYFAEF 75
           LRGYFAEF
Sbjct: 94  LRGYFAEF 101

[Close]
BLAST of MC01g0028 vs. ExPASy TrEMBL
Match: A0A540LJL7 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_027793 PE=4 SV=1)

HSP 1 Score: 131 bits (330), Expect = 2.37e-37
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 0 

Query: 16 IRSPTSLTFQHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPFCEEAPLLPKLRGYFAEF 75
          + SPTSLTF+HWAGVSPHTWSYDFAETCVFGKQSPGPGHCDP CE APLLPKLRGYFAEF
Sbjct: 24 VMSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEGAPLLPKLRGYFAEF 83

The following BLAST results are available for this feature:
BLAST of MC01g0028 vs.
Match NameE-valueIdentityDescription
BLAST of MC01g0028 vs. NCBI nr
Match NameE-valueIdentityDescription
EPS74531.12.38e-5096.00hypothetical protein M569_00248, partial [Genlisea aurea][more]
PWA54452.14.71e-4996.00hypothetical protein CTI12_AA435150 [Artemisia annua][more]
KAG6474749.18.08e-4796.00hypothetical protein ZIOFF_068688 [Zingiber officinale][more]
KAG6483622.14.39e-4696.00hypothetical protein ZIOFF_060273 [Zingiber officinale][more]
XP_020999426.11.38e-4590.67uncharacterized protein LOC110281477 [Arachis duranensis][more]
BLAST of MC01g0028 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
S8DAJ41.15e-5096.00Uncharacterized protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_00248 PE=... [more]
A0A2U1LZL22.28e-4996.00Myb-like domain-containing protein OS=Artemisia annua OX=35608 GN=CTI12_AA435150... [more]
A0A6P5NU316.68e-4690.67uncharacterized protein LOC110281477 OS=Arachis duranensis OX=130453 GN=LOC11028... [more]
A0A427AP021.82e-3786.76Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00020298 PE=4 SV=1[more]
A0A540LJL72.37e-3791.67Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_027793 PE=4 SV=1[more]
BLAST of MC01g0028 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g0028.1MC01g0028.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast