MC00g_new0693 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g_new0693
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1
Location	scaffold31: 1391305 .. 1403089 (+)
RNA-Seq Expression	MC00g_new0693
Synteny	MC00g_new0693

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAAAAAAAAAAAAAACAAAAGAAAACCCTAGCCATCTCTTTCTCCCCCTCTCCCCACTTCATGTTCCAGCCGTAAGTCACCCCCCTCTTGCTTCTTCTTCTCCAGCAACTCCTCACCGGCGGCGGCACACTCCGACGACGCCTGCAACACGCTGCTCAAGAACCCGACGGCATCTCCACGACGGCGCGACGGATTCTGCATCGGCGTTCTCCACCATCGTCGGCAACACTCCACCCGTGAGCTCGCCGACAATCCACACCCCGACGGCGGCACAGTGAGTTCAACGGCGGCGCGACCTTTCTTCCTCGGCGGCGTTCGTCTACCCCGACGTTCCAGCGGCGGTGAGTTCATAACAGCAGCAGCGGCACCATCTTCGATCCGTTGCACGTCGAGACCAAACCCGAACGGTAGTGACGCGCGGTTTCTGCAGCAACAGCGACGGTCCGAGGGTCATTCGTGACAGATCGTCATTTGGGAACGACTTCTGACGGCTTCGGGTCCAAACAACACTCCTTCTTCACCTAGGCGCGTGTACAGCAGTGTTCGGTACCTGATTTGGTGCGTCTCTCCTGCTGCAACTCGTGGACAGCAGCGTTTCAGTGGCATTCGGGCTTACCCACACCCGTTCGAAGCCCGATCTAAGCTACCCACACCTTGGCGAGCTAGATCTAGGTTACACACACCTATACGAAGTCGATTTTATGGTAATGAGTCATTTGAACCCTCTTAGAATTGATTTCGAAGGCTGAATATTAAATGTAACTTGCTGTTTTTTTTTTTCTGTTTGTGTACCTAGGTGTGAGATCGACGCAAAACTTAGGGACGCGGTTGTGTGTAAGTAGACGAGGGGCTGGTGCGTGCGTTGATGTTTATTTTTTGGTTGTCGTTGTGCTGTTTTATGATGTTTAATATTGATTTCGATACGTTATTGTGCAGTGTAACTCTTGTTTATGTTGGATTATATGCCTGAGTAGTATTGAATGTCCGTCGGTGATAATAATGGAAATTTTGTATTGTTGAGCTGTTGAGATCTGTTGTGGAATGATGCATGTTGCAGGGAATGCTCGTTATGTTGGATTATATAGCTGTTTTTTTTCTCTTGATGCCCAAGTGTTGAATCGACGCAAGTTTTCTCTTGATGCCTAAGTGTTGAATCGACGCAAGGTTTAGGAACATAGCAGTGTGTAAGTAGCACTAAGGGGCGGATGTGTGTGTTAGTAGGTGCTTTTGACATGGTTTCTTTTTCAGCTATCTTATTTTGTGCATCTTATGTATGTAAAAGTTTTTTTGTCATGGTTAAAGGCTTGTAGATGCTATCGATGAGTTACGTTCTTGCTGTAGGTTTGTTTTGAGAATTAATGATGTGATTTTTCATGCTATTAGGTGTTGAACAAAAATTGTTAGGTGAAGTCGGGATATTCTTGATGTGGTTTCTCATGTTGTAATGTGTTGGAAAATTTGTTTGTGATATGTTTGAACTCTCATGACGTAGTCCTTCGCGATATAATGTGCTGAAACTTACTTATCATATATGTTTTGACACTCTTGTTGTGACCGTATATAGTAGAAAGTGTGGGAATAATTTGTATGAATTAGCTGGGCTTTCTTCTCGTAGTTTCTAGGTGTAAGAGCATCCTGAATCAAGAGGGTCATTGTCATTGTATTGCATATGGTGTAGAAAATGCTAGGATCTTGTTGTTGTGACTTGTGACTATGTTAGTCGTGTTATCTCTTGGCTTGGGCTAATGTGTTGGAGTACCTATTGTGGAAATGAGCTGAACAAATGTTAAATTGTGTGTTTTTGTGTTCTGTAATGCGTTACTGTCCTATTGGATGACTTTGATGCGAAAATATGCTGTGGGAAAATTGGAATGGTAGGATAGGCTTTTAACAGAGGACCATGACTCGAATGCGGGGTCGGTTGTGTAATGTGAGGTGGATACACAAGTGTACCAGCTTCGAGGCAAGTGGTCGAGGATGTTACGTCACTACTGGGTATCGAGGCTCTGGGTACAAAAGGATGGGGGTCGGCATGATGAATCTTTGATGAGGAGTATTGGTTCTTGATGTGGTGACGGTCAAGGACCAATACGCTGAGTAGACGTCTTGGCCTTGAGTACAAAAGGTCAAGGGTCGATGCACAGTTTGGGGTCCTGAGAGTAGGGTTCAAGGGTCGATGCACAGTTCGAGGTCCTGAGAGTAGGGGTCAAGGTCGAACGTCAAGCTTCGGTATAGGAGTGTCGGGGTATTGGGTACAAAAGGCTGAGGGCCGATACGAATCAAAGAGTTAGACTTGGAGGACTAACATAATATGATGGGCAAGAAGAAACTCGGGAAGGGTAGAAGGCAACAAGCCTTGCGGTCGAAGTTCTGTGAGGCGTGATGCTTGGACCGTATGTATGTGTATTGACTTCTGTTTTTATTTTTTTTTCCTATTGTGATGGTTACCATATGTAGTCTTGTGATGCGTGTTGCGATGTCGAGCATGATGTCTGTGTTTAGTTAGTGAGGGCTACTTACGAAGTATTTTTACATACTCACGCCCCTCTGCAATTATTGTTTTTAGGTGTAGGCCAAGTGTGTGGCCATGGTGATGACGTGGAGGAGGCTTGACCAAGAAAGGGGCTACGTTAACCTTACTCAGGATAGTTGAATTGTAGTATGACTGTCGGGGGCGTAGGGACTCATTGATAGTAGTGGACTAGCTATGGTTGTTTTTGTTTCGCGTTGAAGTATTTTGTTTCCTTTCCAGTTGAACCTTTGTCGTCACTTGTTGGATTGCTCATTTACCTTGGACTTGTTGGTCAAGTAGAAGTTTCCTTTCTTTATGAACTTATTAGCTCACTGAGGGCAGACAATCTTCATTTAGGAGATTTGGAGTATGAGTTCCCTCATTGTTATCCTTTATTTGTTGTCTTATGCTTTCGTTCTGGGGGAGAGTTGAATAGGGAGTTTGTTCCCTGGGAGCATTGTTGAATTTTTCTGGGGCATTACAGGCACTCTGCTCCAGCATGCTCGTCCGGAGGTTTCATCGGGCTACGACATGGGTAACGCCTCTGTTGCGAGACCTAACTGTAAGTTTACGAACTTGTTTTTCTCCGCATTCATCTCCTAAAATGTTTGAATGCTTGGACTTCAATAGCTCTTTTTTGGGTTCATCTGTCACTTGATTATGTCTTCATATGCATTTCGATTTGTTGATTGGATTGGCAATACACAGTTCTTCGTTTCTCTTTATTTCTGCTTAGTTTTTGGACGGAAGAGGTAGGTTCCTCTTCTTACAACCCTAAATTTATATAAAGAACTCATATGATTGTTTGTTACTTTCTCTAATGTGATTTTTCTCTTATGTGTTGACATCTATTTTGTTTCCGATTCTGGTTTTTCGGATTACAACTGCCTACTAGTTTACCTTTGGGCTCAATTTTATTTTATTTTTAAACTTAAATCCTTTGTTTTGTGTCACTCATGGAATAATTCAATTTGGGCTAAAAACGTTCTCCTTTCCTTATTTATGGTAGTAATTTTATGATATTACTAGAACTGAGCTCCTGTTAGTCTAGTCTGAATTTGGAACGTCAAGACCTTGGTTGGAAATTCTTAGAGTAGAGTTGCGCATTACTTTCTCATATACTGCATTAGCATGTGTTTGTTTCAGATTTATTTTAACGAATCTCAATTCATTATGCTCACACAGGCTGGACAAATAATGGACCTTGGAGTCAGCAGACTGCAAGTTGGGAACTCTTGTTACTGTACAATGGTTCAAGCTCAAATGTGTCAACAGCTTGCTGATAGAGATATGAAAAATAAGGTATCTGACATGCTGCACCTGCCGCTCAAAGTTGTACAGTCATTTCTTTGAAAGTATGGGGCGTACTTTTCTAGTCTATTGATGCCTTAGGAGAGTACATTAGTTCTGTTAATCTTTTAAAGATTTGATTTTTTTTTTTTTGGTATAATTGTTATAGTTCTCACTATTTAAACTGCAGCATTTGGTAGCAGAAGTGATATTAAGTTTGATGAGATATCTTTTATTGAAGGCTTTAAAGAAGGAAAAGAGTTCCATTATCTTTGTTATAATTAGGAGGATAAAAGAGTGCTGGATCTTTTCACTTGTCAAGTTCTTCTGCTCGTAAATCTTTCTGCTTGTTTTTAGTCTCTTCTACTATGGTGCATTAGATTATGTTTAATATTGAGTGAACTTTTGAAATTACAAATGTGTAGTTCTCTTTCTCTTTCTCTTTATTTTGTTTTTATTTTTCTGTCAAACATCCCACAAATCTGATATGCATTGAGTTTCACTTAGACAGAGTAATAGTAATTATTGAAATTATTGTATACGTATTTTATGATAAATTAGTTGAATCTTAAATTGTCTACCAATGATCCAGGATGTTAACAATAGTAAAGCTTTGTGCCAGAGATCAGAGCAAAATGATGGAGACATGAGAAAGCACCAAATTGGGGAAAATGTCTCACGGAAGGACAAAATTAACTTCCTTGTAGCCACAGTAAGTATAAACGGCCAAATATCTTCCTTTTTTAGTTGGGGGTTCAAATTCAACTTCAAGGGTGATGTTTAAAGTTACAGGGAAGACACCTTTATGTATAATTTATACAGTGATTGAAATTATGTTATAGGTGATTTTTCATTAGAGGCTATTGAATTTTATCCAGTGATGTTTGAAATTATGTTGTAGGTGTATTTTCATTTGAACATGAGGCTATTGAATTTTTCATGATAACTAATTCCAAATGCCAAAAACAGACAAAAAAAAAAGAAAGAAAGAAAGAGGCACTTCATGTATAAAAGATCTTCTTAAGAAAGGTCTTGTAAGGTGGACGAGGAACTTTTTAATCTTGTATAGGTCATACCAGTAGAGGCCAAACTAACAAATATTGCTGAAAAATGGAAATTGAAGAGTGTTCTTGTTTCCACAACAATTGCTGAACAAAACACTCCACTGGGGAAAGGCAACTAAATTTTAATTCTGCTTTCATTGATCAATGTGGATTATGCCTTTTCTGGACTTGTGTTTTCTAGGAATTTTTGTCTTCTTTCATTTTTTCTTAATCAAAGTTTGGTTTTTTCTGTAAAAAAATCATCAAATTATAATAAAAAATCTAATTTTTCAGTGAGAAGTCCACTTGCTCTTTGAAATTTGATATTTTGTACTTTGATGCAGCCCAACTAAGGAATAGCTTAACAATATATTATTTGTTCAGCTGTATTCTCTGTCAATATAAGCCCTATGATTTGTATGCAAAATTACTTCTTACAGGAAGATGATTAATACAAGTTCAGAATTACATGACATAAATATATCTGACATTTTTTTATTTAGATGACGCCCATAATAAGCTTTCTTCCATTTATTCAAAGGTCCAATATCAAATTTTGATTTTCTTAAAAGTAATTATATGACCTTGGAGGTTTATCGGTTCTCTTAATCATTCCAATTTTTGAAGCTTGTTGATCTGAGAGGTAGTAAGGAGGCTGTTTATGGTGCTCTTGATGCCTGGGTTGCATGGGAGCAAAACTTTCCAATAGCATCCCTTAAGCAGGTATTAGCTGTTCTTGAGAAGGAACAACAGTGGCATAGAGTTGTTCAGGTATGAACTGTACCAGCCATTCTTTATCTACTCTCTTTTATCTTTCCCCACTCTTCCCATGTTGATGTAGAATCTGTGAGATTAGTAATCTCCCTAGACAAAAGACACGAAGAACATTGAATATATGGGGCAGGAATAAGTGCCTGCAATTAGATGCAAATGCACAGAATCTAAGAGAATGCACAACTGAGCCTTAGTTTGAGAAAGGGTGAATTATAGCGAAGAAACCACACATGAACATCTATTTGATTATTACTCTACAGTTTGATTCAAGTTGTGATCGTGAAATATAGCTTTGTTAAAAATTGATATGTTTACATTATTTTGCATAAACTGGAAAATACTTACACCTGGGTTATAGCATCCAAGTATTATAGATATTACTGAGTTAAACCGTGGAAAAATTAAGTACTAAACATTTTTCTGAAGCTTGCTCCTGTTGGATTTAGATAAAGTTAATGGGTAAAGGTACAGGTTATAGAAACAGTTGGTGTTAGATTCATGTGAATGTCTTCCAGGTAATCAAATGGATGTTAAGCAAGGGGCAGGGAACCACTATGAGAGTCTACGGACAGTTAATACGGGCTTTAGACATGGACCATCGAGCAGAAGAATCGCACAAATTCTGGGTCATGAAAATTGGTGCAGATCTACATTCGGTCCCTTGGCAATTATGCAGAAGCATGATATCAATATACTATCGAAATAAAATGCTAGACAATCTTGTGAAGGTATAATTCTCTCTTTCATTTAGCCAATGTAGTGCGGAAATGACTTTATGTTTGGGATATTGTTTTGTTATTTTCCCTTTTTTCCAATTAAACTATTTGGTATAGGAAGTACATTTTTCCTCCCATCTTAAAAACAAAAAATAGTATGTCTAGACACTTCATGAGGAACTTATCCTAAAGGGCTTCTTGATGGGAAGTAAAAGGGTCCCTTTAAACCTCCTTCAATATGTGGATGACACAATCATTTTCAGTCAAGGAACTACGGAAGATCTATTACAATGGTTTGAGGTCATTTCCATGTTATCTTTGCCTCGGGTTTGTCTCTCAACATCAACAAAACTTCTCTGGTGGGAATCAATATTAGTGAGGAGATGACGCAAGACTGTGCAACGTTTTTAGGGTGCAAGATTGAATCACTCCCAATGTCCTATCCGGTTTTCCTCTAGGGGGTAATCCAAAAACCCTTGGCTTCTGGGATCCTATGGTGGACAAATTCTGAGCCAAGCTGTCTAAGTGGAAAGGCCTCTTCCTTTCCCAAGGGGGTCGGTTAACTTTGGCCCAATCGGTCCTCAATAGTCTACCTCTGTACTATTTTTCCTTGTTAAAAGCCCCTGTGGGAATTACAAAAGAAATGGACCACCTAGTTCGAGATTTCTTTTGGGAAGGAGAGGACTCTCACTCGTGCAGCCACCTTGTGAAATGGGAATGGACCTCTCTCCCCCTCTCTTTTGGCGGATTGGGTATTGGATCTTTTAAACAACGGAACCATACTCTCCTTCTCAAGTGTCGATGGTGTTTCACTCAGGAATAAGATGCCTTATGGAGAAGAGTGATAGATAATATTTATTGGAGTACAACAAACGGTGGATGGTTGCAATTCCAAAAGGAGCCCCTAAAGGTCGCCCTTGGTACGACATAGGCAGAAATACGAATTAGTTCCTTAGCTTCCTTGGATTCAAGGCAAACAACGGTCAAAGAATCAGGTTTTGGAAGGATTTATGGGTAGGTGACTGTTCTTTAGAAAATGCCTTTCCGAACCTATTCCTTTTGTCTTCCAAAAAAAAGGAATCGATAGCTAATTTGCTGGAATGCCTAGCAGTGTGACTGGGACCTTGGCTTTAGAAGAGGCCGTTTTGACAGAGAGCTAGACAGTTGGCTGGGTTTGGTCAACAAGATCGACGTGGTGCAATTGGGAGAAGGGAGAGATGTGATTAAATGGAAAATAGGAAGCTCGGGCCAGTTTACTACGAAGGAAACGTTCATAAACTTGACAAGTCCTGAATTCATTGATTCTGAAGGCTATTTGGAACTTTAGATATCCAAAGAAGATAAAAGTCTTCTTGTGCTCATAGAGGCTTGAATACGCACGAAAGATTTAAAAAACGATGCAAAAACTGGGCCCTCTCCCCATCGGTGTGCTCTCTATGCAACATGGACGAAGAAACGTTGGACCATATCTTTATTCATTGCTCCTTTGCCCAAAAGGCTTGGTATATAATTTTTAATGTCTTCAATATAAGCTTTTGCCTCCAAAACCACATTGAAGACTGGTTGGTGCATTCACTCATGGGGAAGTTTTAGGCATAAAACCAGAAGCCTTTGGAACTATGTCATTGTGGCTACTCTATGTAACCTTTGGCTAGAACGTAATAGAGGACTTTTAAGAATGAGAGTTTGACTTTTGATAGTTTTTGGACAAACGTACAGCTAATGTCCTCCAGGTGGTGTCTTTCTTTGAATAATTTCTTTTTGTAATTACTCCCTCGGTGTAATTCTCCAAAATTGGAGCTCTTTCTTGAATTAGATTTTTTGAAGAGTAGGGGGCTTCCTCTGACCCTGCCCCTAGTGCTGTACCTCTTTTTTGCGAGTAAAACATACACATGTTTCTTATAAAAAAAAAAAAAAGATCTGTAATGGTTCCTCTGGTTGAAGAGATATTTAGACCTCTTTTGATTATTTTTAGCTTTCCTTGTCCTCTTGGGAGGCAAAAGACTTTTCTACGATTTCAATGTGAATAAAAAAGAGTACCAAAAATCGGTGATCTGTTGACCTTATCTCAGGTGTAAAAATGAAGCATGAGGTCATCCATTAAGACTTCATATTATTACGCTTGTTGGATAGTTCCCAATTAAGACTCCAGTTATTTCGGCGAATTAACAAAGGACTATCATGCAACAGGACAAAGGTGATCAAAACAAAGACTATAGATAAAGAAACGATGGAAAAAAAATAGGGAAAAAGTCTCTTATTTGTTTTAATCCTCCCAAAATCTGATACCAAGTTACTAACTTGATTGTGGTAGGGAAGTGATGTGGATATTTCTTCTTGTAGCTCCTAGAGTAATCCACTTCACAACTTAGAGTAAGATAAATGCCCTTGTAACCCAAATTCGCAAACTTTGATTTTATCAATTCTCATGCTAGTTTGTATAGATATGCAATCAACTGATGATTGAAGTCGAAGTAATTCTAGTAAGATGGGGAAAAAGCAGAAGCAATCTAGCTACTATCATTCCAATTCTGACAGGTTTTCGCCTTGAAGATCTAATATCTCTTTATAGGCTGGTTATTGTTATTGCACTCAATACTGCAGAACCTTCACTTAGTCTTGGAGGTAGAAATTGTCAATGAGAAATTCCTGTCTGATAACTACTACTCTTTGATATAGGAATTTCTACTACTCTTTGCTATAAAAGTCCTAGCCACTAGACTAAAGAAAGTTCTTCCCTTGATCATTCACGATTCACAAGCAGTGTTTGTAGAGGGCCGCCAAATATTAGATGCCATTCTAGTTGCCTCAGGGACTGTGGGTCATTGGAAAAAGGAGAGAAAGAAAGGTTTTTTTCTAAAGCTTGATTTTGAAAAGGCATATGACAAAGTCGATTGGGCCTTCCTCGATGCGGTCCTTAAGGCAAAGGTTTTGAGAGTAAATGGCGTATATGGATTCAAGGCTGTCTTACAACCACAGATTTCTCTATGATTATAAATGGTAGACCGAGGGGAAAAATATTGGCTAGGAGGGGCCTTAGACAAGGGGACCCTCTCTTCCCTTTCTTGTTCACCATTGTGGGGGATGCATTGATCAATTTTTGCAAAGAAAGGAACATTATCAAAGGCTTTTCCATAGGATCGCCTGCTGTGGAAATTACCCACCTCCAATATGCTGATGATGTATTGATTTTCTGTCCTTTTATCCCTCAGATGATGGAAAACTGGTGGGGGATGATTCATTTCTTTCTAATAGTATCGGGCCTCTCACTTAACATAGCCAAAACAACCGTGATTGGTATAAATTGCAGCGCCACAGAGGTTAACATATGGGCTTCTACCTTTAGCTGCAAATCAGAAACCCTACCTTTCACTTGTTTGGGCTTCCCTCTAGGAGGCAATCACAGGGAGCCAATTTTTGGGATCCGGTAGTGGACAAAATACATAAAATACTTCAAAAATGGAGATCTCTGATGCTCTAAAGGGGGACGCCTCACCTTGGCTCAATTTATCCATAATAGCATCCCCATTTATTATTTCTCGATCCTAGAAGCCCCCAAAACAGTGATTACATCTAAGGAGAAGCTTATGAGGGACTTTGTATGGAACGGAGGAAAGCATATGCCGATGGGAAACTTGGTTAAATGGTCATGGTCCGCCTTGCCCCATCAACAAGGAGGTCTAGGGGCATCGGATCTCTATCCCTTAGAAACAAAGCCCTCATGAAATGGCTTTGGCATTTTGCAGTGGGAAAAAACAGTTTTTGGAGAAAGGTCATAGCTGCGATCTATGGAGAAGACACTCATGTCTAGACTACTTTGCATATAGGGGGGTCATCGATTGGCATACCATGGATTGACATTCAAGGTACGAGCATATCTTTTACCAACCTCACCTTCTTTAAAGTTTCAAAGGGTGAGAATGTCAATTTTTGGGAAGATACATGGATATATGACCCACCCCTTTCAGTTACCTTTCCTGATTTTTATGGATTATCCTCCAAAAAATGAAAATCGGTTGCAGAATGTTGGGTTTCAGAAGTTGGGACCTCGTGTTGAGAAGAAATCTCTTTGAAAGGGAGGTGGACAGTTGGGCTGCTCTCACGGAGAAGATAGATGGGGTGGTTTTAGGTCAAGGAACAGATAGGATATGGTGGAAAGCTGATAGCACAGGCCTGTTCTTTGTAAAATCTGCTCTGCTGGCTATTACCACCCCTTCTCCTAAGCTAAATTCGGACAAAACTTGAAATTTTAGAGTTCCAAAGAAGGTAAAAGTCTTCCTTTGGACTATTTTCTACCGGAGCACTAACACGGCAGAGAAACTACAAAAGGGACTTCCACATTTGGCTCTTTCTCCCCATATTTGTGCTTTGTGCTTGCAAAATTCAGAAAATGTGGATCACTTCTTGCATTGTTCTTTCGCTACAGAGGCATGGAATTATGTTGCCTCTCTTAGACTTCTCCTTTTGTCTCCCAAGGAATATAGATGACTTCACAGAAGGCTTTGGTGGAAACGCATTCAAAGGAAAAACTTATGTCCTTTGGAACCGTGCGGCGAAGGCTCTCCTTTAGCTTCTTTGGTGAGAAAGAAATAGAACTCTCAAGGACAAAGCAGTTTTGAAAGATTTTTTTTTTTTTTTTTGAATATCAAGCATACAGCTTCTTTGGTGGGCTTCCATCCACAAAAAGATTTTTTGTAATTACAGTCTGCTTTTGATTATGCAAGATTGAAAAGTGAAAAGCTGAAATTGTATAGTCTTGAGAGAGGGTTCTCTACCCTCCGCCTTTAGGTTGTATTCCTCATTTTTGGGTTTCATGGTTAATATACATCCTTGTTTCTTTATAAAAAAAACTACTCTTTGCTATAGAATGATATCTATTATCTATCATCGGTGAATTTAGAATTCTTCTGGATCTGAGATCATTACTCCTGTTTTCTTTTATGCTGATCTTGCCTTTTGTATTGAAAAGCTTTTTAAGGATCTTGAAGCTTTTGGACGCAAACCTCCAGAAAAATCCATAGTGCAGAGGGTAGCAGATGCGTATGAGATGTTAGGCTTGCATGAAGAGAAAGAGAGGGTGTTAGAGAAGTATAAAGATCTTTTTACAGATGAAAGGAAAGGACCCATCCAGAAATATAACAAGATTTCGTTTGAGAAATCGAAGAGAAGAAGAAAATTGACAAAGGTTTCGAAAGACAATGGCGATCTTAGGAAGCCTCAATGAATGAAGTAAACTGTTAGGTTATAAATTTTTTAAGCATCAAAAAGTGATGTAATAGCAGCAGCTGTGTTAATTGCATAAGATTTTTGCTGCACTATTTATTGGTTTTCTTTTCTTTTCTTGTTGTAGTAGGGAAAATTCATTTGACCTGACCTAATTAGAAATTAGTATAGATTATAAATTTAGTCGTCAGTTGTCACACTTTAAATGTTTTAATTATGGAGTGT

mRNA sequence

ATGCTCGTCCGGAGGTTTCATCGGGCTACGACATGGGTAACGCCTCTGTTGCGAGACCTAACTGCTGGACAAATAATGGACCTTGGAGTCAGCAGACTGCAAGTTGGGAACTCTTGTTACTGTACAATGGTTCAAGCTCAAATGTGTCAACAGCTTGCTGATAGAGATATGAAAAATAAGGATGTTAACAATAGTAAAGCTTTGTGCCAGAGATCAGAGCAAAATGATGGAGACATGAGAAAGCACCAAATTGGGGAAAATGTCTCACGGAAGGACAAAATTAACTTCCTTGTAGCCACACTTGTTGATCTGAGAGGTAGTAAGGAGGCTGTTTATGGTGCTCTTGATGCCTGGGTTGCATGGGAGCAAAACTTTCCAATAGCATCCCTTAAGCAGGTATTAGCTGTTCTTGAGAAGGAACAACAGTGGCATAGAGTTGTTCAGGTAATCAAATGGATGTTAAGCAAGGGGCAGGGAACCACTATGAGAGTCTACGGACAGTTAATACGGGCTTTAGACATGGACCATCGAGCAGAAGAATCGCACAAATTCTGGGTCATGAAAATTGGTGCAGATCTACATTCGGTCCCTTGGCAATTATGCAGAAGCATGATATCAATATACTATCGAAATAAAATGCTAGACAATCTTGTGAAGCTTTTTAAGGATCTTGAAGCTTTTGGACGCAAACCTCCAGAAAAATCCATAGTGCAGAGGGTAGCAGATGCGTATGAGATGTTAGGCTTGCATGAAGAGAAAGAGAGGGTGTTAGAGAAGTATAAAGATCTTTTTACAGATGAAAGGAAAGGACCCATCCAGAAATATAACAAGATTTCGTTTGAGAAATCGAAGAGAAGAAGAAAATTGACAAAGGTTTCGAAAGACAATGGCGATCTTAGGAAGCCTCAATGA

Coding sequence (CDS)

ATGCTCGTCCGGAGGTTTCATCGGGCTACGACATGGGTAACGCCTCTGTTGCGAGACCTAACTGCTGGACAAATAATGGACCTTGGAGTCAGCAGACTGCAAGTTGGGAACTCTTGTTACTGTACAATGGTTCAAGCTCAAATGTGTCAACAGCTTGCTGATAGAGATATGAAAAATAAGGATGTTAACAATAGTAAAGCTTTGTGCCAGAGATCAGAGCAAAATGATGGAGACATGAGAAAGCACCAAATTGGGGAAAATGTCTCACGGAAGGACAAAATTAACTTCCTTGTAGCCACACTTGTTGATCTGAGAGGTAGTAAGGAGGCTGTTTATGGTGCTCTTGATGCCTGGGTTGCATGGGAGCAAAACTTTCCAATAGCATCCCTTAAGCAGGTATTAGCTGTTCTTGAGAAGGAACAACAGTGGCATAGAGTTGTTCAGGTAATCAAATGGATGTTAAGCAAGGGGCAGGGAACCACTATGAGAGTCTACGGACAGTTAATACGGGCTTTAGACATGGACCATCGAGCAGAAGAATCGCACAAATTCTGGGTCATGAAAATTGGTGCAGATCTACATTCGGTCCCTTGGCAATTATGCAGAAGCATGATATCAATATACTATCGAAATAAAATGCTAGACAATCTTGTGAAGCTTTTTAAGGATCTTGAAGCTTTTGGACGCAAACCTCCAGAAAAATCCATAGTGCAGAGGGTAGCAGATGCGTATGAGATGTTAGGCTTGCATGAAGAGAAAGAGAGGGTGTTAGAGAAGTATAAAGATCTTTTTACAGATGAAAGGAAAGGACCCATCCAGAAATATAACAAGATTTCGTTTGAGAAATCGAAGAGAAGAAGAAAATTGACAAAGGTTTCGAAAGACAATGGCGATCTTAGGAAGCCTCAATGA

Protein sequence

MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLRKPQ

Homology

[Close]

BLAST of MC00g_new0693 vs. ExPASy Swiss-Prot
Match: Q2V3H0 (Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g18975 PE=2 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 1.0e-32
Identity = 75/183 (40.98%), Postives = 108/183 (59.02%), Query Frame = 0


Query: 97  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSK 156
           LV  L  L   KEAVYGAL+ WVAWE  FPI +  + L +L K  QWHRV+Q+ KWMLSK
Sbjct: 101 LVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKRSQWHRVIQLAKWMLSK 160

Query: 157 GQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDN 216
           GQG TM  Y  L+ A DMD RA+E+   W M +     S+P +L   MI++Y  + + D 
Sbjct: 161 GQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRLFARMIALYAHHDLHDK 220

Query: 217 LVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPI 276
           ++++F D+E     P E S  +RVA A+  L   E ++    R L +YK ++ +  +  +
Sbjct: 221 VIEVFADMEELKVSPDEDS-ARRVARAFRELNQEENRKLILRRYLSEYKYIYFNGERVRV 280

[Close]

BLAST of MC00g_new0693 vs. ExPASy Swiss-Prot
Match: Q8LG95 (Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.3e-29
Identity = 69/197 (35.03%), Postives = 108/197 (54.82%), Query Frame = 0


Query: 64  NSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVAWEQ 123
           N+  +C          R  +  + +    K   ++A +  L   KE VYGALD+++AWE 
Sbjct: 28  NNVVVCAARGPRPRSPRVWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWEL 87

Query: 124 NFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEESHK 183
            FP+  +K+ L +LE E++W +++QV KWMLSKGQG TM  Y  L+ AL  D+R +E+ +
Sbjct: 88  EFPLVIVKKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEE 147

Query: 184 FWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRVADA 243
            W       L   P +    MISIYY+  M   L ++F D+E  G K P  +IV  V   
Sbjct: 148 LWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVK-PNVAIVSMVGKV 207

Query: 244 YEMLGLHEEKERVLEKY 261
           +  L + ++ E++++KY
Sbjct: 208 FVKLEMKDKYEKLMKKY 223

[Close]

BLAST of MC00g_new0693 vs. NCBI nr
Match: XP_022154416.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X3 [Momordica charantia] >XP_022154418.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X3 [Momordica charantia])

HSP 1 Score: 605 bits (1561), Expect = 2.01e-218
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60
           MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK
Sbjct: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60

Query: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120
           DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA
Sbjct: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120

Query: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180
           WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE
Sbjct: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180

Query: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240
           SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV
Sbjct: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240

Query: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300
           ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Sbjct: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300

Query: 301 KPQ 303
           KPQ
Sbjct: 301 KPQ 303

[Close]

BLAST of MC00g_new0693 vs. NCBI nr
Match: XP_022154414.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 605 bits (1561), Expect = 4.90e-218
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60
           MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK
Sbjct: 25  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 84

Query: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120
           DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA
Sbjct: 85  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 144

Query: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180
           WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE
Sbjct: 145 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 204

Query: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240
           SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV
Sbjct: 205 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 264

Query: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300
           ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Sbjct: 265 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 324

Query: 301 KPQ 303
           KPQ
Sbjct: 325 KPQ 327

[Close]

BLAST of MC00g_new0693 vs. NCBI nr
Match: XP_022154415.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 578 bits (1490), Expect = 2.24e-207
Identity = 293/303 (96.70%), Postives = 293/303 (96.70%), Query Frame = 0


Query: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60
           MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK
Sbjct: 25  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 84

Query: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120
                     RSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA
Sbjct: 85  ----------RSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 144

Query: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180
           WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE
Sbjct: 145 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 204

Query: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240
           SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV
Sbjct: 205 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 264

Query: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300
           ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Sbjct: 265 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 317

Query: 301 KPQ 303
           KPQ
Sbjct: 325 KPQ 317

[Close]

BLAST of MC00g_new0693 vs. NCBI nr
Match: XP_038887984.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 494 bits (1271), Expect = 3.12e-174
Identity = 248/303 (81.85%), Postives = 273/303 (90.10%), Query Frame = 0


Query: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60
           MLVRRFHRAT W TPLLRDLT GQIM+LGVSRLQVG+ CYCTM+Q QM +QLA +D+KNK
Sbjct: 1   MLVRRFHRATAWATPLLRDLTVGQIMELGVSRLQVGSFCYCTMIQDQMSKQLAVKDIKNK 60

Query: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120
           D NNSKAL Q SEQN GD+RKHQIG+NV RKDKINFLV TL+DLR SKEAVYGALDAWVA
Sbjct: 61  DFNNSKALGQTSEQNIGDVRKHQIGKNVPRKDKINFLVNTLLDLRDSKEAVYGALDAWVA 120

Query: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180
           WEQ+FPI SLK VL VLEKEQQWHRVVQVIKWMLSKGQGTTM VYGQLIRALDMDHRAEE
Sbjct: 121 WEQDFPIGSLKHVLTVLEKEQQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEE 180

Query: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240
           +HKFWVMKIG+DLHSVPWQLCRSMI+IYYRNKML++LVKLFKDLEAFGRKPPEKSIVQRV
Sbjct: 181 AHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPEKSIVQRV 240

Query: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300
           ADA E+LGL EEKERVL KYK LFTDE++G I+KY ++SFEKSK +RK TK ++DN +L 
Sbjct: 241 ADACEILGLLEEKERVLMKYKYLFTDEKEGSIKKYKRVSFEKSKGKRKSTKSTEDNSNLM 300

Query: 301 KPQ 303
           K Q
Sbjct: 301 KAQ 303

[Close]

BLAST of MC00g_new0693 vs. NCBI nr
Match: XP_022967610.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 475 bits (1223), Expect = 4.95e-167
Identity = 240/301 (79.73%), Postives = 264/301 (87.71%), Query Frame = 0


Query: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60
           ML+RRFHRA TW TPLLRD T GQ+M+LGV++LQ+GNSCYCTM+Q QM ++ AD+DM +K
Sbjct: 1   MLIRRFHRAATWATPLLRDTTVGQVMELGVNKLQIGNSCYCTMLQNQMPKRFADKDMTDK 60

Query: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120
           DVNNSK L Q SE+N GD+RKHQIGENVSRKDKINFLV TL+DLR SKEAVYGALDAWVA
Sbjct: 61  DVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKINFLVNTLMDLRDSKEAVYGALDAWVA 120

Query: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180
           WEQ+FPIASLK  LAVLEKE QWHRVVQVIKWMLSKGQGTTM VYGQLIRALDMDHRAEE
Sbjct: 121 WEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEE 180

Query: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240
           +HKFWVMKIG+DLHSVPWQLCRSMISIYYRNKML++LVKLFKDLEAFGRKPPEKSIVQRV
Sbjct: 181 AHKFWVMKIGSDLHSVPWQLCRSMISIYYRNKMLEDLVKLFKDLEAFGRKPPEKSIVQRV 240

Query: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300
           ADA EMLGL EEKERVL KY  LFTDE+KG I+KY        K +RK TK ++DN DL 
Sbjct: 241 ADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKY--------KGKRKSTKGNQDNSDLM 293

[Close]

BLAST of MC00g_new0693 vs. ExPASy TrEMBL
Match: A0A6J1DNN5 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X3 OS=Momordica charantia OX=3673 GN=LOC111021690 PE=4 SV=1)

HSP 1 Score: 605 bits (1561), Expect = 9.72e-219
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60
           MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK
Sbjct: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60

Query: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120
           DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA
Sbjct: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120

Query: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180
           WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE
Sbjct: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180

Query: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240
           SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV
Sbjct: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240

Query: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300
           ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Sbjct: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300

Query: 301 KPQ 303
           KPQ
Sbjct: 301 KPQ 303

[Close]

BLAST of MC00g_new0693 vs. ExPASy TrEMBL
Match: A0A6J1DM10 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021690 PE=4 SV=1)

HSP 1 Score: 605 bits (1561), Expect = 2.37e-218
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60
           MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK
Sbjct: 25  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 84

Query: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120
           DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA
Sbjct: 85  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 144

Query: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180
           WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE
Sbjct: 145 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 204

Query: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240
           SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV
Sbjct: 205 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 264

Query: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300
           ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Sbjct: 265 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 324

Query: 301 KPQ 303
           KPQ
Sbjct: 325 KPQ 327

[Close]

BLAST of MC00g_new0693 vs. ExPASy TrEMBL
Match: A0A6J1DJJ2 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021690 PE=4 SV=1)

HSP 1 Score: 578 bits (1490), Expect = 1.09e-207
Identity = 293/303 (96.70%), Postives = 293/303 (96.70%), Query Frame = 0


Query: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60
           MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK
Sbjct: 25  MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 84

Query: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120
                     RSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA
Sbjct: 85  ----------RSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 144

Query: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180
           WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE
Sbjct: 145 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 204

Query: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240
           SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV
Sbjct: 205 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 264

Query: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300
           ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR
Sbjct: 265 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 317

Query: 301 KPQ 303
           KPQ
Sbjct: 325 KPQ 317

[Close]

BLAST of MC00g_new0693 vs. ExPASy TrEMBL
Match: A0A6J1HUZ4 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467059 PE=4 SV=1)

HSP 1 Score: 475 bits (1223), Expect = 2.39e-167
Identity = 240/301 (79.73%), Postives = 264/301 (87.71%), Query Frame = 0


Query: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60
           ML+RRFHRA TW TPLLRD T GQ+M+LGV++LQ+GNSCYCTM+Q QM ++ AD+DM +K
Sbjct: 1   MLIRRFHRAATWATPLLRDTTVGQVMELGVNKLQIGNSCYCTMLQNQMPKRFADKDMTDK 60

Query: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120
           DVNNSK L Q SE+N GD+RKHQIGENVSRKDKINFLV TL+DLR SKEAVYGALDAWVA
Sbjct: 61  DVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKINFLVNTLMDLRDSKEAVYGALDAWVA 120

Query: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180
           WEQ+FPIASLK  LAVLEKE QWHRVVQVIKWMLSKGQGTTM VYGQLIRALDMDHRAEE
Sbjct: 121 WEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEE 180

Query: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240
           +HKFWVMKIG+DLHSVPWQLCRSMISIYYRNKML++LVKLFKDLEAFGRKPPEKSIVQRV
Sbjct: 181 AHKFWVMKIGSDLHSVPWQLCRSMISIYYRNKMLEDLVKLFKDLEAFGRKPPEKSIVQRV 240

Query: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300
           ADA EMLGL EEKERVL KY  LFTDE+KG I+KY        K +RK TK ++DN DL 
Sbjct: 241 ADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKY--------KGKRKSTKGNQDNSDLM 293

[Close]

BLAST of MC00g_new0693 vs. ExPASy TrEMBL
Match: A0A6J1HGC4 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463832 PE=4 SV=1)

HSP 1 Score: 471 bits (1212), Expect = 1.13e-165
Identity = 238/301 (79.07%), Postives = 263/301 (87.38%), Query Frame = 0


Query: 1   MLVRRFHRATTWVTPLLRDLTAGQIMDLGVSRLQVGNSCYCTMVQAQMCQQLADRDMKNK 60
           ML+RRFHRA TW TPLLRD T GQIM+LGV++LQ+GNSCYCTM+Q QM ++  D+DM +K
Sbjct: 1   MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDK 60

Query: 61  DVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFLVATLVDLRGSKEAVYGALDAWVA 120
           DVNNSK L Q SE+N GD+RKHQIGENVSRKDKI+FLV TL+DLR SKEAVYGALDAWVA
Sbjct: 61  DVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNTLMDLRDSKEAVYGALDAWVA 120

Query: 121 WEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKGQGTTMRVYGQLIRALDMDHRAEE 180
           WEQ+FPIASLK  LAVLEKE QWHRVVQVIKWMLSKGQGTTM VYGQLIRALDMDHRAEE
Sbjct: 121 WEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEE 180

Query: 181 SHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNLVKLFKDLEAFGRKPPEKSIVQRV 240
           +HKFWVMKIG+DLHSVPWQLCRSMISIYYRNKML++LVKLFK+LEAFGRKPPEKSIVQRV
Sbjct: 181 AHKFWVMKIGSDLHSVPWQLCRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRV 240

Query: 241 ADAYEMLGLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLR 300
           ADA EMLGL EEKERVL KY  LFTDE+KG I+KY        K +RK TK ++DN DL 
Sbjct: 241 ADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKY--------KGKRKSTKGNQDNSDLM 293

[Close]

BLAST of MC00g_new0693 vs. TAIR 10
Match: AT1G04590.1 (BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 279.6 bits (714), Expect = 2.9e-75
Identity = 144/226 (63.72%), Postives = 172/226 (76.11%), Query Frame = 0


Query: 44  VQAQMCQQLAD------RDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFL 103
           VQ+   Q +AD      R +KN+D  +     ++   N  + RKHQIGEN+ +KDKI FL
Sbjct: 92  VQSMSYQFVADSHSSPKRIVKNEDEEDFSDSSKKG--NAENPRKHQIGENIPKKDKIKFL 151

Query: 104 VATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKG 163
           V TL+D+  +KEAVYGALDAWVAWE+NFPIASLK V+A LEKE QWHR+VQVIKW+LSKG
Sbjct: 152 VNTLLDIEDNKEAVYGALDAWVAWERNFPIASLKIVIASLEKEHQWHRMVQVIKWILSKG 211

Query: 164 QGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNL 223
           QG TM  YGQLIRALDMD RAEE+H  W  K+G DLHSVPWQLC  M+ IY+RN ML  L
Sbjct: 212 QGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVPWQLCLQMMRIYFRNNMLQEL 271

Query: 224 VKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDL 264
           VKLFKDLE++ RKPP+K IVQ VADAYE+LG+ +EKERV+ KY  L
Sbjct: 272 VKLFKDLESYDRKPPDKHIVQTVADAYELLGMLDEKERVVTKYSHL 315

[Close]

BLAST of MC00g_new0693 vs. TAIR 10
Match: AT1G04590.2 (BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-73
Identity = 144/229 (62.88%), Postives = 172/229 (75.11%), Query Frame = 0


Query: 44  VQAQMCQQLAD------RDMKNKDVNNSKALCQRSEQNDGDMRKHQIGENVSRKDKINFL 103
           VQ+   Q +AD      R +KN+D  +     ++   N  + RKHQIGEN+ +KDKI FL
Sbjct: 92  VQSMSYQFVADSHSSPKRIVKNEDEEDFSDSSKKG--NAENPRKHQIGENIPKKDKIKFL 151

Query: 104 VATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSKG 163
           V TL+D+  +KEAVYGALDAWVAWE+NFPIASLK V+A LEKE QWHR+VQVIKW+LSKG
Sbjct: 152 VNTLLDIEDNKEAVYGALDAWVAWERNFPIASLKIVIASLEKEHQWHRMVQVIKWILSKG 211

Query: 164 QGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDNL 223
           QG TM  YGQLIRALDMD RAEE+H  W  K+G DLHSVPWQLC  M+ IY+RN ML  L
Sbjct: 212 QGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVPWQLCLQMMRIYFRNNMLQEL 271

Query: 224 V---KLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKERVLEKYKDL 264
           V   KLFKDLE++ RKPP+K IVQ VADAYE+LG+ +EKERV+ KY  L
Sbjct: 272 VKVMKLFKDLESYDRKPPDKHIVQTVADAYELLGMLDEKERVVTKYSHL 318

[Close]

BLAST of MC00g_new0693 vs. TAIR 10
Match: AT4G18975.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 7.2e-34
Identity = 75/183 (40.98%), Postives = 108/183 (59.02%), Query Frame = 0


Query: 97  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSK 156
           LV  L  L   KEAVYGAL+ WVAWE  FPI +  + L +L K  QWHRV+Q+ KWMLSK
Sbjct: 101 LVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKRSQWHRVIQLAKWMLSK 160

Query: 157 GQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDN 216
           GQG TM  Y  L+ A DMD RA+E+   W M +     S+P +L   MI++Y  + + D 
Sbjct: 161 GQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRLFARMIALYAHHDLHDK 220

Query: 217 LVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPI 276
           ++++F D+E     P E S  +RVA A+  L   E ++    R L +YK ++ +  +  +
Sbjct: 221 VIEVFADMEELKVSPDEDS-ARRVARAFRELNQEENRKLILRRYLSEYKYIYFNGERVRV 280

[Close]

BLAST of MC00g_new0693 vs. TAIR 10
Match: AT4G18975.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 7.2e-34
Identity = 75/183 (40.98%), Postives = 108/183 (59.02%), Query Frame = 0


Query: 97  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSK 156
           LV  L  L   KEAVYGAL+ WVAWE  FPI +  + L +L K  QWHRV+Q+ KWMLSK
Sbjct: 74  LVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKRSQWHRVIQLAKWMLSK 133

Query: 157 GQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDN 216
           GQG TM  Y  L+ A DMD RA+E+   W M +     S+P +L   MI++Y  + + D 
Sbjct: 134 GQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRLFARMIALYAHHDLHDK 193

Query: 217 LVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPI 276
           ++++F D+E     P E S  +RVA A+  L   E ++    R L +YK ++ +  +  +
Sbjct: 194 VIEVFADMEELKVSPDEDS-ARRVARAFRELNQEENRKLILRRYLSEYKYIYFNGERVRV 253

[Close]

BLAST of MC00g_new0693 vs. TAIR 10
Match: AT4G18975.3 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 7.2e-34
Identity = 75/183 (40.98%), Postives = 108/183 (59.02%), Query Frame = 0


Query: 97  LVATLVDLRGSKEAVYGALDAWVAWEQNFPIASLKQVLAVLEKEQQWHRVVQVIKWMLSK 156
           LV  L  L   KEAVYGAL+ WVAWE  FPI +  + L +L K  QWHRV+Q+ KWMLSK
Sbjct: 101 LVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKRSQWHRVIQLAKWMLSK 160

Query: 157 GQGTTMRVYGQLIRALDMDHRAEESHKFWVMKIGADLHSVPWQLCRSMISIYYRNKMLDN 216
           GQG TM  Y  L+ A DMD RA+E+   W M +     S+P +L   MI++Y  + + D 
Sbjct: 161 GQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRLFARMIALYAHHDLHDK 220

Query: 217 LVKLFKDLEAFGRKPPEKSIVQRVADAYEMLGLHEEKE----RVLEKYKDLFTDERKGPI 276
           ++++F D+E     P E S  +RVA A+  L   E ++    R L +YK ++ +  +  +
Sbjct: 221 VIEVFADMEELKVSPDEDS-ARRVARAFRELNQEENRKLILRRYLSEYKYIYFNGERVRV 280

The following BLAST results are available for this feature:

BLAST of MC00g_new0693 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V3H0	1.0e-32	40.98	Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidop...	[more]
Q8LG95	2.3e-29	35.03	Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX...	[more]

BLAST of MC00g_new0693 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154416.1	2.01e-218	100.00	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X3 ...	[more]
XP_022154414.1	4.90e-218	100.00	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ...	[more]
XP_022154415.1	2.24e-207	96.70	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 ...	[more]
XP_038887984.1	3.12e-174	81.85	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ...	[more]
XP_022967610.1	4.95e-167	79.73	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ...	[more]

BLAST of MC00g_new0693 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNN5	9.72e-219	100.00	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X3 ...	[more]
A0A6J1DM10	2.37e-218	100.00	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ...	[more]
A0A6J1DJJ2	1.09e-207	96.70	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 ...	[more]
A0A6J1HUZ4	2.39e-167	79.73	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ...	[more]
A0A6J1HGC4	1.13e-165	79.07	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ...	[more]

BLAST of MC00g_new0693 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04590.1	2.9e-75	63.72	BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) super...	[more]
AT1G04590.2	1.2e-73	62.88	BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) super...	[more]
AT4G18975.1	7.2e-34	40.98	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.2	7.2e-34	40.98	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.3	7.2e-34	40.98	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 92..269 e-value: 1.8E-6 score: 29.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..303
None	No IPR available	PANTHER	PTHR47603:SF1	PPR CONTAINING-LIKE PROTEIN	coord: 5..289
None	No IPR available	PANTHER	PTHR47603	PPR CONTAINING-LIKE PROTEIN	coord: 5..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g_new0693.1	MC00g_new0693.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding