MC00g_new0602 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g_new0602
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribonuclease H
Location	scaffold15: 968983 .. 970950 (-)
RNA-Seq Expression	MC00g_new0602
Synteny	MC00g_new0602

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATTGGTGCGAATTTGAAGAATCCTAGAAGGCCAAATTTCTGCATCAACAATTTGGAGAATCTCAATTGATGTCGTCTGTGGGGACGACTAGAGATTGCAGACTTATCGACATGGTTTGGGAAGGAGTTCACAACATTCTGATGAAGAGTGCCACCATAGGAGAAAAGTTAATACGGGTACACCTCTGCCTGAGACAGCCGAAGGAGAGACCGACCGACCAATTCTCGAACAGAAAAATAAACCGATCAAAGTTTGGATCAATAGGGCGATAAGTTGGTCGTCCTAGAGGAGAAGGTCGAGAGAATGCACCGAAACATATCCCTGCTTCTACAAAAACTCGAGCAACATGAAGTGGAACAGTCACTACTTGTTCGCGATCCACGGAAGGGTAAAGCTCTAATGATTGAAGGAGTTGGGGAGTCAACCAACCATGCACGGAGAAAAGTGAAGATAAGAGGAAACAATGGATCTTGAACCAGCATCTTTGGCCGGTTAGGTCAGTAAGCAGCTGTACAACAACAGAAGTCTGTCGTGCCCAACGAAAGCAAAAGCTATCCAGTTGACCGAGTCGGCCTCGGGCATACTACTGTTGACAAAAGAAGACCACCCGGTCGAACCAAGCTATTAGAAATACAGTCAGGATGACACAAAGATAAGAAGTTTGATCTTGAGGAACTGATAGACCAAGCAGACTCTTCCTTTAAGGAGAAAATAATGAAAGAAAAAGTTCCTCCGAAGTTCAAGCTACCCGCTATCAAAAAGTACGACGGTTCGACAGATCCCATCGATCACCTCGATGTGTACCATGAATGGACAGATATTTATGGCATAACAGAAGCCATTAGATGCAGAGTGTTCTCTTTCACTCTGACTGGTTCCACACGCATATGGTTTCAGCAATTGAAAAGGAAATCGATCTCAAGCTTCAAGGAATTGGCAAGGGCATTTGTCACCCAATTCGCCGGAGGATGGAATAGAAGCAGGCCTGTAGCATACCTACTAACTATTAAGCAAAAAGCGACAGAGAGCCTCAAAGACTATGTGGCTCGGTTCAATAAAGAGAAGCTACAAGTGGAAGGTCTGACAGATGCAGTGGTACTGCTTGTCTTTATATCTGGTGTGAAGGACGAGCAATTGGTGTTCTCTTTTGGGAAGAGAACTTCAGGCACTTTCTCAGAAGCTCGAAGCCGAGCCCAGACGTACATGAGTGTCGGAGAATTAATTCACTCGAAGCGTGACCCTAAAGGAAAATATGCAGATTATAACACAAAGAGAAAGAGGCCTGGAGAAAAGCGACACGGATTGAGGTGGGAGAGATCAGATAGCGGACAGGGTCGACTAGTCCAACGGGATCCTCAGCGGAAATTTGAAAAATACACTCCAACAACGGTCCCACTAGAGCAGGTCTTGATGGAAATAAAACACTAGACACTACTCAAATGGTCTGACATGATGAAAGCATCCTCCAACAAAAGGAGCAAAGGAAGGTATTGTTTGTTCTATAGAGATCATTGTCACACGACACAGGATTGTTTCGACCTCAAAGAAGAAATAGAGGACCTCATTCGAAGAGGTTACCTCAAAGAGTACGTGGAAGAATCCAGGACAACTCTAGACAGAGATCGAGACGACAAGTCACCCATCAAAGAGATAAAAACGATATTAGGAGGACCTACGGGAGGGGAATCAAGCAGGAATAGGTGAAGTCAAAGGAATGCAACGAGTATCACGAGAGTGTTACTATACTTCACTGAGATGCAACTAAGGAAACTGATGAGACTCACGCTTCAGGATCATATTAAATTTTTTATATTTCGCTTTTTACCTTAGATAGGACCATATCATTGCATGTTTGATAGGATAGATTATTTTTACTTTTTCCCTGTATGATGATTGCATATTGCGTTGAAATAAGGTAGGTTTTATTTATTTGTTTCCTTTTCAATAAAATCATAGGTACTTTT

mRNA sequence

ATGAAAGAAAAAGTTCCTCCGAAGTTCAAGCTACCCGCTATCAAAAAGTACGACGGTTCGACAGATCCCATCGATCACCTCGATGTGTACCATGAATGGACAGATATTTATGGCATAACAGAAGCCATTAGATGCAGAGTGTTCTCTTTCACTCTGACTGGTTCCACACGCATATGGTTTCAGCAATTGAAAAGGAAATCGATCTCAAGCTTCAAGGAATTGGCAAGGGCATTTGTCACCCAATTCGCCGGAGGATGGAATAGAAGCAGGCCTGTAGCATACCTACTAACTATTAAGCAAAAAGCGACAGAGAGCCTCAAAGACTATGTGGCTCGGTTCAATAAAGAGAAGCTACAAGTGGAAGGTCTGACAGATGCAGTGGTACTGCTTGTCTTTATATCTGGTGTGAAGGACGAGCAATTGGTGTTCTCTTTTGGGAAGAGAACTTCAGGCACTTTCTCAGAAGCTCGAAGCCGAGCCCAGACGTACATGAGTGTCGGAGAATTAATTCACTCGAAGCGTGACCCTAAAGGAAAATATGCAGATTATAACACAAAGAGAAAGAGGCCTGGAGAAAAGCGACACGGATTGAGGTGGGAGAGATCAGATAGCGGACAGGGTCGACTAGTCCAACGGGATCCTCAGCGGAAATTTGAAAAATACACTCCAACAACGGTCCCACTAGAGCAGGTCTTGATGGAAATAAAACACTAG

Coding sequence (CDS)

ATGAAAGAAAAAGTTCCTCCGAAGTTCAAGCTACCCGCTATCAAAAAGTACGACGGTTCGACAGATCCCATCGATCACCTCGATGTGTACCATGAATGGACAGATATTTATGGCATAACAGAAGCCATTAGATGCAGAGTGTTCTCTTTCACTCTGACTGGTTCCACACGCATATGGTTTCAGCAATTGAAAAGGAAATCGATCTCAAGCTTCAAGGAATTGGCAAGGGCATTTGTCACCCAATTCGCCGGAGGATGGAATAGAAGCAGGCCTGTAGCATACCTACTAACTATTAAGCAAAAAGCGACAGAGAGCCTCAAAGACTATGTGGCTCGGTTCAATAAAGAGAAGCTACAAGTGGAAGGTCTGACAGATGCAGTGGTACTGCTTGTCTTTATATCTGGTGTGAAGGACGAGCAATTGGTGTTCTCTTTTGGGAAGAGAACTTCAGGCACTTTCTCAGAAGCTCGAAGCCGAGCCCAGACGTACATGAGTGTCGGAGAATTAATTCACTCGAAGCGTGACCCTAAAGGAAAATATGCAGATTATAACACAAAGAGAAAGAGGCCTGGAGAAAAGCGACACGGATTGAGGTGGGAGAGATCAGATAGCGGACAGGGTCGACTAGTCCAACGGGATCCTCAGCGGAAATTTGAAAAATACACTCCAACAACGGTCCCACTAGAGCAGGTCTTGATGGAAATAAAACACTAG

Protein sequence

MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWFQQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQVEGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKYADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFEKYTPTTVPLEQVLMEIKH

Homology

[Close]

BLAST of MC00g_new0602 vs. NCBI nr
Match: XP_022147761.1 (uncharacterized protein LOC111016619 [Momordica charantia])

HSP 1 Score: 476 bits (1226), Expect = 1.43e-169
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60
           MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120
           QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120

Query: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180
           EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY
Sbjct: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180

Query: 181 ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFEKYTPTTVPLEQVLMEIKH 237
           ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFEKYTPTTVPLEQVLMEIKH
Sbjct: 181 ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFEKYTPTTVPLEQVLMEIKH 237

[Close]

BLAST of MC00g_new0602 vs. NCBI nr
Match: XP_022158344.1 (uncharacterized protein LOC111024851 [Momordica charantia])

HSP 1 Score: 338 bits (866), Expect = 9.14e-115
Identity = 171/220 (77.73%), Postives = 185/220 (84.09%), Query Frame = 0


Query: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60
           MKEK  PKFKLPAI +YDGS DPIDHLD Y EW DIY I EAIRCRVFSFTLTGS R WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120
           +QLKR SISSFKELA AFVTQF GG  +S+PV YLLTIKQKATESLK+YVARFN+EKLQV
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQKATESLKEYVARFNEEKLQV 120

Query: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180
           EGLTDAV L+ F+SGVKDE+LVFSFGKRT GTF EA SRAQ YMS GELIH  RD + + 
Sbjct: 121 EGLTDAVALIAFVSGVKDERLVFSFGKRTPGTFMEALSRAQKYMSAGELIHLSRDLERER 180

Query: 181 ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFEK 220
           A+Y+TKR+R GEKRH   WERSDSG GRLVQRDPQ KFEK
Sbjct: 181 ANYSTKRERRGEKRHRSSWERSDSGHGRLVQRDPQLKFEK 220

[Close]

BLAST of MC00g_new0602 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 338 bits (866), Expect = 3.96e-109
Identity = 171/236 (72.46%), Postives = 193/236 (81.78%), Query Frame = 0


Query: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60
           M+EKVPPKFKLP +K++D +TDP+DHLD Y EW DIYG++EA+RCRVFS TL GS RIWF
Sbjct: 185 MREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWF 244

Query: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120
           +QLKR SISSFK LARAFVTQF GG  RSRPVAYLLTIKQ+ TESL+DYVARFN+EKLQV
Sbjct: 245 RQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQV 304

Query: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180
           EGLTDAV LL F+SGV+DE L FSFGKRT  TFSEA SRAQ YMS GE  +SKR+P GK 
Sbjct: 305 EGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGKR 364

Query: 181 ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFEKYTPTTVPLEQVLMEIK 236
            D   KR+R G+K  G RWE+ D    R  Q+DP RKFEKYTPTTVP+EQVLMEIK
Sbjct: 365 TD--PKRERSGDKPQGSRWEKRD----RSSQKDPPRKFEKYTPTTVPIEQVLMEIK 414

[Close]

BLAST of MC00g_new0602 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 292 bits (748), Expect = 7.69e-96
Identity = 149/218 (68.35%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60
           M+EKVPPKFKLP +K +DG T+P+DHLD Y EW DIYG+++AIRCRVFS TL GS RIWF
Sbjct: 90  MREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLNGSARIWF 149

Query: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120
           +QLKR SISSFK LARAF+TQF GG  RSRPVAYLLTIKQ+  ESL DYVARFN+EKLQ+
Sbjct: 150 RQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQL 209

Query: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180
           EGLTDAV LL F+SGV+DE L FSF KRT  TFSEA SRAQ YMS  E  +SKR+P GK 
Sbjct: 210 EGLTDAVSLLAFMSGVRDEHLSFSFEKRTPSTFSEALSRAQRYMSASEFCYSKREPDGKR 269

Query: 181 ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKF 218
            D   KR+R G+K  G RWE+ D G     Q+DP RKF
Sbjct: 270 TDQ--KRERSGDKPQGSRWEKRDRGS----QKDPPRKF 301

[Close]

BLAST of MC00g_new0602 vs. NCBI nr
Match: XP_022150035.1 (uncharacterized protein LOC111018307 [Momordica charantia])

HSP 1 Score: 281 bits (720), Expect = 2.43e-92
Identity = 138/203 (67.98%), Postives = 166/203 (81.77%), Query Frame = 0


Query: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60
           MK KVPPKFKLP +K++DG+ D +DHLD Y EW DIYG++EA++CRVFS TL+GS R+WF
Sbjct: 5   MKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSARVWF 64

Query: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120
           +QLKR SISSFK LA+AFVTQF GG +RSRPVAYLLTIKQ+ATESL DYVARFN+EKLQV
Sbjct: 65  RQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEKLQV 124

Query: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180
           EGLT+AV L+ F+S ++DE L FSFGK+T  TFSEA SRAQ YMS GE   SKR+P+GK 
Sbjct: 125 EGLTNAVSLMAFMSDIRDEHLSFSFGKKTPSTFSEALSRAQKYMSAGEFFFSKREPEGKQ 184

Query: 181 ADYNTKRKRPGEKRHGLRWERSD 203
           +D N  R+R G+K    RWE+ D
Sbjct: 185 SDQN--RERSGDKPQWSRWEKRD 205

[Close]

BLAST of MC00g_new0602 vs. ExPASy TrEMBL
Match: A0A6J1D3B7 (uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016619 PE=4 SV=1)

HSP 1 Score: 476 bits (1226), Expect = 6.93e-170
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60
           MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120
           QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120

Query: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180
           EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY
Sbjct: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180

Query: 181 ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFEKYTPTTVPLEQVLMEIKH 237
           ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFEKYTPTTVPLEQVLMEIKH
Sbjct: 181 ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFEKYTPTTVPLEQVLMEIKH 237

[Close]

BLAST of MC00g_new0602 vs. ExPASy TrEMBL
Match: A0A6J1DZ49 (uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024851 PE=4 SV=1)

HSP 1 Score: 338 bits (866), Expect = 4.43e-115
Identity = 171/220 (77.73%), Postives = 185/220 (84.09%), Query Frame = 0


Query: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60
           MKEK  PKFKLPAI +YDGS DPIDHLD Y EW DIY I EAIRCRVFSFTLTGS R WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120
           +QLKR SISSFKELA AFVTQF GG  +S+PV YLLTIKQKATESLK+YVARFN+EKLQV
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQKATESLKEYVARFNEEKLQV 120

Query: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180
           EGLTDAV L+ F+SGVKDE+LVFSFGKRT GTF EA SRAQ YMS GELIH  RD + + 
Sbjct: 121 EGLTDAVALIAFVSGVKDERLVFSFGKRTPGTFMEALSRAQKYMSAGELIHLSRDLERER 180

Query: 181 ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFEK 220
           A+Y+TKR+R GEKRH   WERSDSG GRLVQRDPQ KFEK
Sbjct: 181 ANYSTKRERRGEKRHRSSWERSDSGHGRLVQRDPQLKFEK 220

[Close]

BLAST of MC00g_new0602 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 338 bits (866), Expect = 1.92e-109
Identity = 171/236 (72.46%), Postives = 193/236 (81.78%), Query Frame = 0


Query: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60
           M+EKVPPKFKLP +K++D +TDP+DHLD Y EW DIYG++EA+RCRVFS TL GS RIWF
Sbjct: 185 MREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWF 244

Query: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120
           +QLKR SISSFK LARAFVTQF GG  RSRPVAYLLTIKQ+ TESL+DYVARFN+EKLQV
Sbjct: 245 RQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQV 304

Query: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180
           EGLTDAV LL F+SGV+DE L FSFGKRT  TFSEA SRAQ YMS GE  +SKR+P GK 
Sbjct: 305 EGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGKR 364

Query: 181 ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFEKYTPTTVPLEQVLMEIK 236
            D   KR+R G+K  G RWE+ D    R  Q+DP RKFEKYTPTTVP+EQVLMEIK
Sbjct: 365 TD--PKRERSGDKPQGSRWEKRD----RSSQKDPPRKFEKYTPTTVPIEQVLMEIK 414

[Close]

BLAST of MC00g_new0602 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 3.73e-96
Identity = 149/218 (68.35%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60
           M+EKVPPKFKLP +K +DG T+P+DHLD Y EW DIYG+++AIRCRVFS TL GS RIWF
Sbjct: 90  MREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLNGSARIWF 149

Query: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120
           +QLKR SISSFK LARAF+TQF GG  RSRPVAYLLTIKQ+  ESL DYVARFN+EKLQ+
Sbjct: 150 RQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQL 209

Query: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180
           EGLTDAV LL F+SGV+DE L FSF KRT  TFSEA SRAQ YMS  E  +SKR+P GK 
Sbjct: 210 EGLTDAVSLLAFMSGVRDEHLSFSFEKRTPSTFSEALSRAQRYMSASEFCYSKREPDGKR 269

Query: 181 ADYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKF 218
            D   KR+R G+K  G RWE+ D G     Q+DP RKF
Sbjct: 270 TDQ--KRERSGDKPQGSRWEKRDRGS----QKDPPRKF 301

[Close]

BLAST of MC00g_new0602 vs. ExPASy TrEMBL
Match: A0A6J1D7D2 (uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018307 PE=4 SV=1)

HSP 1 Score: 281 bits (720), Expect = 1.18e-92
Identity = 138/203 (67.98%), Postives = 166/203 (81.77%), Query Frame = 0


Query: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60
           MK KVPPKFKLP +K++DG+ D +DHLD Y EW DIYG++EA++CRVFS TL+GS R+WF
Sbjct: 5   MKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSARVWF 64

Query: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120
           +QLKR SISSFK LA+AFVTQF GG +RSRPVAYLLTIKQ+ATESL DYVARFN+EKLQV
Sbjct: 65  RQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEKLQV 124

Query: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKY 180
           EGLT+AV L+ F+S ++DE L FSFGK+T  TFSEA SRAQ YMS GE   SKR+P+GK 
Sbjct: 125 EGLTNAVSLMAFMSDIRDEHLSFSFGKKTPSTFSEALSRAQKYMSAGEFFFSKREPEGKQ 184

Query: 181 ADYNTKRKRPGEKRHGLRWERSD 203
           +D N  R+R G+K    RWE+ D
Sbjct: 185 SDQN--RERSGDKPQWSRWEKRD 205

The following BLAST results are available for this feature:

BLAST of MC00g_new0602 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g_new0602 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147761.1	1.43e-169	100.00	uncharacterized protein LOC111016619 [Momordica charantia]	[more]
XP_022158344.1	9.14e-115	77.73	uncharacterized protein LOC111024851 [Momordica charantia]	[more]
XP_022158830.1	3.96e-109	72.46	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159109.1	7.69e-96	68.35	uncharacterized protein LOC111025548 [Momordica charantia]	[more]
XP_022150035.1	2.43e-92	67.98	uncharacterized protein LOC111018307 [Momordica charantia]	[more]

BLAST of MC00g_new0602 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3B7	6.93e-170	100.00	uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DZ49	4.43e-115	77.73	uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DWY0	1.92e-109	72.46	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1E1E7	3.73e-96	68.35	uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D7D2	1.18e-92	67.98	uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of MC00g_new0602 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 47..138 e-value: 6.3E-13 score: 48.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..210
None	No IPR available	PANTHER	PTHR33223	FAMILY NOT NAMED	coord: 22..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g_new0602.1	MC00g_new0602.1	mRNA