MC00g_new0434 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g_new0434
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	scaffold7: 733102 .. 736430 (-)
RNA-Seq Expression	MC00g_new0434
Synteny	MC00g_new0434

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCATTCAGGACCGAGTCAACTCGGATTGGGATTGTGTGAGGGTGGGGAAGAATCGATGGCCGAGAACTCTTCAATGTCGAGAAGGTTTCAGAGCCGAGGTCTGGTCAATGACTGCTTGACGCTAACCCCGGGTCGGTTATAGCCAGCCCGGGTTGTCGGGTCCCAACCCACTTACCTTGCTTCGCGGGTCTGCTTTTTCTTCGACTTCATTCCTCCTTTTCGGTTGTTTAATCTGATCTCCAATTTCTTCCTATAACAATAGCCCCAACTCTCAAAATAGAAGGCATAAAGCACGTTAGGACTTCTATATTAAGAGTATTTGTCGCTGTCAGTTGTCATCATTATGGGCTGGCTATCCTAACCCCCATTCTCTTTTGTTGTAGTTGGCTATAATCAAGTCTCTTAGGCACTACTATACGGTTAGTTTTTACCGCTAGATTTTGGCCTTGGGATTTAACTTCTCAGCAGGGCCGGTGGTAATTCATTAGGTTTCTAACCTATTTGGCTTCTGCCCATGATTCTATACCCCAGGATTCACTCTTGGGTTTCTAACCTATTTGGCTTTTGCCAATGATTTTATACTCTGAGTCTAGTCGACCTTAGGTTTCTAACCTTTTGGCTTTTGTTGGTTTTTTACCCTAAGTTAATTAATGCCCCTGGGTTTTTAACCTATTTTGATTTTTACCAAATGGTTTCTACTCCTCGGTTTTATTGATTGGTTAGGTTTGCCTGTCTTTTGTTTTAACCTTGTTGGGCCTATACACGTGCCTTTTAGCATCTTTGGGATTCTTTTCCCTGGTTTTACTGACTGGCTTCTAGCTTTTCGGCCTACTTCTAAGTCTGTCCCAGTTCGAGTTCCTTGACCAGCTATTAATTTACTTACCCATGCCCCCACTTGAGAGATATTCATTTAGAATAAAAGATAAGCGCTCAAGTAATAAAGGTTTAGTTACATTTCAAATGTCAAAAGTCTTATTCAGAATATGTTAAGAGATAATTGCTCAAGTAATAAGGAATTAATTAAATTTCAGATGGTATGAGCTTTTTTAAATCACAAACAAGTAAGTATCTTTGGAAACATAATATTTGACTTTATCAACATGCAGTTGCCAAAAAATCAGTCATAAATTATGCGGTCGACCAAATATGCAATTACCAGAAAATTAAACCTAAACTTTCATAATCACAAACAACCAGAATTACACAGCAAACTTACCATTGTCTGAAGTAGAAACTCCATACTTTAATCAATTGCTTTTCAAGGTAGTGTAATAGCCTTCTCGTGATACTCGTCATTCTTTTTTTATTCTCGTTTTTTTTAACTAGATTCTCATACTGCAGGTCCTCTTAATATTATCCTTATCTCCTTGGTGGGAGACTTTGTTGTTGTGGCTTGTTGCTGGGAGTACCTTGGAGTTTTCAACAAATTTTTTGAGGAGACCGTTGCGAATGAGATCTTTCTCCTTTTCCTTGAGACCATGATATCCTTGTGTTGGATGGCTCTGACCCGGACGGAAGAGGCAATATTTTCCTTTAGTTTTTGTGAGATGACACCTCTATCTTTTTGGGCCATCTAGGTAGGTCCTTATCTTTTATCAAGATCTATTCGAGTGGGATTGTCGTTGGAGTATACCTCTCCAGAGGTTCTCGTTGAAGCGAGCCACATATTTTTTTAGGCTCTCCATTAATTTCTATTTTATGGTAAGAAAGTAGGCCACATCCTCCAGATGCCCTAGCCAACTCTTTGAAGAAGAAAATTAACTTCCTCCTCAATTGTCGAAACCAGACGTGAGTCATACTAGTTAACGTGAATGAAAATACCTTGCCCTTAACAACTTTTGTCACTCCGTAGATGTCAATCCATCCTCTGTATGCATCTAGGTGATCAGTAGGAACTGTTGAGTCGTTGTATTGTATGATAGCAGAAAATTTTGACCTTTAGAGGGACTATCTTTTCCACGAGTAGTGAATCTGCCTGGTAGGCGAAAAAGACCTGGTCAGAATACGAGGCCTGGTCAGCCGAAGAATCTTGGTACGCGAAAGAGACTTGGTCGGCAAAAGAGACCTTACCAATGGAAGAAACCTGGTCGGCCGAAGACACCTGGTCGGCAGAAGAGACCTTACCAACCGAAGAAACCTAGTCGACCGAAGACACCTGGTCGGCAGAGACCTGGTCAGTAGAGACCTGCTCTGCTGAAACCTGATCATGCCCTGAACCTAGTCATTCCTTGGATCCAATCATGTCCTGGAGTCTGGTCATGTCTTGGATTGGGTCATGACCAGTTATATAGTTTGCTTGTTAGGTCTTTGTAGTAGCTTTGTTCTTCTATGGACCTCGGACGAGCGTAGGTTGTTTTTTCTTTTCTGTATTTGTTGACTCGTTTATCCCAGATTCTGTTTTGGAATCCGTCGATTTATCTCATTTAGGATCTATCCTAGAATTTGTTGATTTGTTCATTCTGGGTCCTGCCTCATAACTTATTGATTTGTCTTTTTCTTGGCTACCTCAGGTAGGCGAAGCCCCCGAGTCGTGCGACATTCGTCGTCAAAAAGTTGCGTCTGCCTCCAGAAGACATGTCAATTTGTTTCTCCCAAGATCTCCTTGGATCTAAGTAGTTCTCGGTCAATTCTTTGTCAATCGTCTTGACTTTTAGTTCTTAGTCGTCCCCATATACGGCGCCAATTGTTGATGCAGAAATTTGACCTCCTGGGATCTCGCTAAATTCACATCAATCTTCTAAAATAAATGGATCGATGGGACCTACAAAACATACTAGAACTAAAAACCGGTGTGACTCTTGCCACACAGGCTTCGATGCCTAAGTTAGGATCGGAGTAGTCGAGTATGGAGAGTATGGTATTTTAGCGTGGCAAATAGTAGAGATTTGTAGCATAGTAAAGAGTAGGGTCTTTAGTCATATCTTTAGGTTTGGTTCACCCTCCTATTTATAGAAGTCGAATCCTATCCCTTCAGAATTTACATCAGTCGAATCCTATTCTCTTCAGAATTTACATAAGTCGAATCTTAGTGCATTGAGAAAATCTATACAAAGTGGGTCTCATGCTACATTCAAGGTCGAGACCAAGTCAACTCGAGTCGGGCTGTGCGAGGGTCGGGAAGAACCGATGAGGTTCTCAACCATTGGACTTAGAACTCCTCAGCGTCGAGAAGGTCTCGACGTTGATGTCTGGTCGGCAACTGCTCCGCGCCGACCCCGGGTCAGCTATGGTCTGCCCGGGTTGTCGGGTCCCGACCCACGTACCTTGTTTCGTGGGTCCGCTTCTTCTTCGGCTTCATTCCTCCTTTTCGGTTGTTTAATCTGA

mRNA sequence

ATGCTGCATTCAGGACCGAGTCAACTCGGATTGGGATTGTGTGAGGGTGGGGAAGAATCGATGGCCGAGAACTCTTCAATGTCGAGAAGGTTTCAGAGCCGAGGTCTGGTCAATGACTGCTTGACGCTAACCCCGGTGAATCTGCCTGGTAGGCGAAAAAGACCTGGTCAGAATACGAGGCCTGGTCAGCCGAAGAATCTTGGTACGCGAAAGAGACTTGGTCGGCAAAAGAGACCTTACCAATGGAAGAAACCTGGTCGGCCGAAGACACCTGGTCGGCAGAAGAGACCTTACCAACCGAAGAAACCTAGTCGACCGAAGACACCTGGTCGGCAGAGACCTGGTAGGCGAAGCCCCCGAGTCGTGCGACATTCGTCGTCAAAAAGTTGCGTCTGCCTCCAGAAGACATGTCAATTTGTTTCTCCCAAGATCTCCTTGGATCTAAAATTTACATCAGTCGAATCCTATTCTCTTCAGAATTTACATAAGTCGAATCTTAGTGCATTGAGAAAATCTATACAAAGTGGGTCTCATGCTACATTCAAGGTCGAGACCAAGTCAACTCGAGTCGGGCTGTGCGAGGGTCGGGAAGAACCGATGAGGTTCTCAACCATTGGACTTAGAACTCCTCAGCGTCGAGAAGGTCTCGACGTTGATGTCTGGTCGGCAACTGCTCCGCGCCGACCCCGGGTCAGCTATGGTCTGCCCGGGTTGTCGGGTCCCGACCCACGTACCTTGTTTCGTGGGTCCGCTTCTTCTTCGGCTTCATTCCTCCTTTTCGGTTGTTTAATCTGA

Coding sequence (CDS)

ATGCTGCATTCAGGACCGAGTCAACTCGGATTGGGATTGTGTGAGGGTGGGGAAGAATCGATGGCCGAGAACTCTTCAATGTCGAGAAGGTTTCAGAGCCGAGGTCTGGTCAATGACTGCTTGACGCTAACCCCGGTGAATCTGCCTGGTAGGCGAAAAAGACCTGGTCAGAATACGAGGCCTGGTCAGCCGAAGAATCTTGGTACGCGAAAGAGACTTGGTCGGCAAAAGAGACCTTACCAATGGAAGAAACCTGGTCGGCCGAAGACACCTGGTCGGCAGAAGAGACCTTACCAACCGAAGAAACCTAGTCGACCGAAGACACCTGGTCGGCAGAGACCTGGTAGGCGAAGCCCCCGAGTCGTGCGACATTCGTCGTCAAAAAGTTGCGTCTGCCTCCAGAAGACATGTCAATTTGTTTCTCCCAAGATCTCCTTGGATCTAAAATTTACATCAGTCGAATCCTATTCTCTTCAGAATTTACATAAGTCGAATCTTAGTGCATTGAGAAAATCTATACAAAGTGGGTCTCATGCTACATTCAAGGTCGAGACCAAGTCAACTCGAGTCGGGCTGTGCGAGGGTCGGGAAGAACCGATGAGGTTCTCAACCATTGGACTTAGAACTCCTCAGCGTCGAGAAGGTCTCGACGTTGATGTCTGGTCGGCAACTGCTCCGCGCCGACCCCGGGTCAGCTATGGTCTGCCCGGGTTGTCGGGTCCCGACCCACGTACCTTGTTTCGTGGGTCCGCTTCTTCTTCGGCTTCATTCCTCCTTTTCGGTTGTTTAATCTGA

Protein sequence

MLHSGPSQLGLGLCEGGEESMAENSSMSRRFQSRGLVNDCLTLTPVNLPGRRKRPGQNTRPGQPKNLGTRKRLGRQKRPYQWKKPGRPKTPGRQKRPYQPKKPSRPKTPGRQRPGRRSPRVVRHSSSKSCVCLQKTCQFVSPKISLDLKFTSVESYSLQNLHKSNLSALRKSIQSGSHATFKVETKSTRVGLCEGREEPMRFSTIGLRTPQRREGLDVDVWSATAPRRPRVSYGLPGLSGPDPRTLFRGSASSSASFLLFGCLI

Homology

[Close]

BLAST of MC00g_new0434 vs. NCBI nr
Match: AOJ16173.1 (hypothetical protein WJ02_21670 [Burkholderia vietnamiensis])

HSP 1 Score: 49.3 bits (116), Expect = 6.36e-04
Identity = 32/69 (46.38%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 41  LTLTPVNLPGRRKRPGQNTRPGQPKNLGTRKRLGRQKRPYQWKKPGRPKTPGRQKRPYQP 100
           + L  +  P R KRP +  RP QPK     K+  R  RP + K+P RPK P R KRP +P
Sbjct: 1   MLLAKLKQPKRPKRPERPKRPEQPKQPKQPKQPTRSTRPTRPKRPKRPKRPKRPKRPKRP 60

Query: 101 KKPSRPKTP 109
           K+P RPK P
Sbjct: 61  KRPKRPKQP 69

[Close]

BLAST of MC00g_new0434 vs. ExPASy TrEMBL
Match: A0A1B6E854 (Uncharacterized protein (Fragment) OS=Clastoptera arizonana OX=38151 GN=g.6856 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.67e-08
Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 49  PGRRKRPGQNTRPGQPKNLGTRKRLGRQKRPYQWKKPGRPKTPGRQKRPYQPKKPSRPKT 108
           PGR K PG+   PG+ K+ G  K  GR K P + K PGR K+PGR K P + K P RPK+
Sbjct: 3   PGRTKSPGRTKSPGRTKSPGRTKSPGRTKSPARPKSPGRNKSPGRTKSPNKTKSPKRPKS 62

Query: 109 PGRQRPGRRSPRVVRHSSSKSCVCLQKTCQF-VSPKISLDLKFTS 152
           P R+ P R+SP   R++SS S        QF +S  + ++LK TS
Sbjct: 63  PSRKSPSRKSP--ARNASSDSIKMENIGSQFRMSTSMPIELKATS 105

[Close]

BLAST of MC00g_new0434 vs. ExPASy TrEMBL
Match: A0A4P7NKM8 (Uncharacterized protein OS=Magnaporthe oryzae OX=318829 GN=PoMZ_11536 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 6.90e-04
Identity = 25/69 (36.23%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 49  PGRRKRPGQNTRPGQPKNLGTRKRLGRQKRPYQWKKPGRPKTPGRQKRPYQPKKPSRPKT 108
           PG+ ++PG+  +PG+P+  G  ++ G+ ++P + +KPG+P+ PG+ ++P +P+KP +P+ 
Sbjct: 77  PGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEK 136

Query: 109 PGR-QRPGR 116
           PG+ ++PG+
Sbjct: 137 PGKPEKPGK 145

[Close]

BLAST of MC00g_new0434 vs. ExPASy TrEMBL
Match: L7I868 (Uncharacterized protein OS=Magnaporthe oryzae (strain Y34) OX=1143189 GN=OOU_Y34scaffold00528g14 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 7.74e-04
Identity = 25/69 (36.23%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 49  PGRRKRPGQNTRPGQPKNLGTRKRLGRQKRPYQWKKPGRPKTPGRQKRPYQPKKPSRPKT 108
           PG+ ++PG+  +PG+P+  G  ++ G+ ++P + +KPG+P+ PG+ ++P +P+KP +P+ 
Sbjct: 104 PGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEK 163

Query: 109 PGR-QRPGR 116
           PG+ ++PG+
Sbjct: 164 PGKPEKPGK 172

[Close]

BLAST of MC00g_new0434 vs. ExPASy TrEMBL
Match: A0A3B4G7L2 (Spondin domain-containing protein OS=Pundamilia nyererei OX=303518 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 7.86e-04
Identity = 35/86 (40.70%), Postives = 42/86 (48.84%), Query Frame = 0


Query: 42  TLTPVN--LPGRRKRPGQNTRP------------GQPKNLGTRKRLGRQKRPYQWKKPGR 101
           T TP++   PG  K PG   RP            G P+   + K  G  +RP   K+PG 
Sbjct: 17  TSTPLSSKTPGNPKTPGNPRRPLSSKTPCNPKTPGNPRRPLSSKTPGNPRRPLSPKRPGN 76

Query: 102 PKTPGRQKRPYQPKKPSRPKTPGRQR 113
           PKTPG  +RP  PK P  PKTPG  R
Sbjct: 77  PKTPGNPRRPLSPKTPGNPKTPGNPR 102

[Close]

BLAST of MC00g_new0434 vs. ExPASy TrEMBL
Match: G4NB61 (Uncharacterized protein OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=MGG_00619 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 9.94e-04
Identity = 25/69 (36.23%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 49  PGRRKRPGQNTRPGQPKNLGTRKRLGRQKRPYQWKKPGRPKTPGRQKRPYQPKKPSRPKT 108
           PG+ ++PG+  +PG+P+  G  ++ G+ ++P + +KPG+P+ PG+ ++P +P+KP +P+ 
Sbjct: 73  PGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEKPGKPEK 132

Query: 109 PGR-QRPGR 116
           PG+ ++PG+
Sbjct: 133 PGKPEKPGK 141

The following BLAST results are available for this feature:

BLAST of MC00g_new0434 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g_new0434 vs. NCBI nr


Match Name	E-value	Identity	Description
AOJ16173.1	6.36e-04	46.38	hypothetical protein WJ02_21670 [Burkholderia vietnamiensis]	[more]

BLAST of MC00g_new0434 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1B6E854	3.67e-08	44.76	Uncharacterized protein (Fragment) OS=Clastoptera arizonana OX=38151 GN=g.6856 P...	[more]
A0A4P7NKM8	6.90e-04	36.23	Uncharacterized protein OS=Magnaporthe oryzae OX=318829 GN=PoMZ_11536 PE=4 SV=1	[more]
L7I868	7.74e-04	36.23	Uncharacterized protein OS=Magnaporthe oryzae (strain Y34) OX=1143189 GN=OOU_Y34...	[more]
A0A3B4G7L2	7.86e-04	40.70	Spondin domain-containing protein OS=Pundamilia nyererei OX=303518 PE=4 SV=1	[more]
G4NB61	9.94e-04	36.23	Uncharacterized protein OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FG...	[more]

BLAST of MC00g_new0434 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g_new0434.1	MC00g_new0434.1	mRNA