MC00g0848 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0848
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Cytochrome oxidase assembly protein
Location	C4659197: 2754 .. 2930 (+)
RNA-Seq Expression	MC00g0848
Synteny	MC00g0848

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGACTTTTGGGATACAAGAGCCTCGCACCCAAGACAAAGAATGTTGTTGTTGCCGGAGGTTTAACTGCTTTTGTGTTTGGGGTATATTTCTACACCATGAGAGCTGTTGGAGGTACAGATGAACTGCAAGTAGCCATAGACCAGTTTGAAGCACAGAAAAGCAACAAGGAT

mRNA sequence

ATGGCTGGACTTTTGGGATACAAGAGCCTCGCACCCAAGACAAAGAATGTTGTTGTTGCCGGAGGTTTAACTGCTTTTGTGTTTGGGGTATATTTCTACACCATGAGAGCTGTTGGAGGTACAGATGAACTGCAAGTAGCCATAGACCAGTTTGAAGCACAGAAAAGCAACAAGGAT

Coding sequence (CDS)

ATGGCTGGACTTTTGGGATACAAGAGCCTCGCACCCAAGACAAAGAATGTTGTTGTTGCCGGAGGTTTAACTGCTTTTGTGTTTGGGGTATATTTCTACACCATGAGAGCTGTTGGAGGTACAGATGAACTGCAAGTAGCCATAGACCAGTTTGAAGCACAGAAAAGCAACAAGGAT

Protein sequence

MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD

Homology

[Close]

BLAST of MC00g0848 vs. NCBI nr
Match: XP_022151963.1 (uncharacterized protein LOC111019802 [Momordica charantia] >XP_022151965.1 uncharacterized protein LOC111019802 [Momordica charantia] >XP_022151966.1 uncharacterized protein LOC111019802 [Momordica charantia])

HSP 1 Score: 119 bits (297), Expect = 1.24e-33
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59
          MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD
Sbjct: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59

[Close]

BLAST of MC00g0848 vs. NCBI nr
Match: XP_038891345.1 (uncharacterized protein LOC120080790 [Benincasa hispida] >XP_038891346.1 uncharacterized protein LOC120080790 [Benincasa hispida])

HSP 1 Score: 110 bits (276), Expect = 2.16e-30
Identity = 53/59 (89.83%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59
          MAGLLGY+ L PKTKN+VVAGGLTAFVFGVYFYTMRAVGG+DELQVAIDQFEAQKS+KD
Sbjct: 1  MAGLLGYRGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKSDKD 59

[Close]

BLAST of MC00g0848 vs. NCBI nr
Match: XP_022956375.1 (uncharacterized protein LOC111458133 [Cucurbita moschata] >XP_022998843.1 uncharacterized protein LOC111493381 [Cucurbita maxima] >XP_023522138.1 uncharacterized protein LOC111785987 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109 bits (273), Expect = 6.20e-30
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59
          MAGLLG + LAPKTKN+VVAGGLTAFVFGVYFYTMRAVGG+DELQVAIDQFEAQK NKD
Sbjct: 1  MAGLLGLRGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKD 59

[Close]

BLAST of MC00g0848 vs. NCBI nr
Match: XP_016900171.1 (PREDICTED: uncharacterized protein LOC103488878 [Cucumis melo] >KAA0034183.1 uncharacterized protein E6C27_scaffold65G001780 [Cucumis melo var. makuwa] >TYK15737.1 uncharacterized protein E5676_scaffold35G002370 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (271), Expect = 1.25e-29
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59
          MAGLLGY  L PKTKN+VVAGGLTAFVFGVYFYTMRAVGG+DELQVAID+FEAQKSNK+
Sbjct: 1  MAGLLGYSGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDKFEAQKSNKE 59

[Close]

BLAST of MC00g0848 vs. NCBI nr
Match: KAG6601607.1 (hypothetical protein SDJN03_06840, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 109 bits (273), Expect = 2.14e-29
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59
          MAGLLG + LAPKTKN+VVAGGLTAFVFGVYFYTMRAVGG+DELQVAIDQFEAQK NKD
Sbjct: 1  MAGLLGLRGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKD 59

[Close]

BLAST of MC00g0848 vs. ExPASy TrEMBL
Match: A0A6J1DG74 (uncharacterized protein LOC111019802 OS=Momordica charantia OX=3673 GN=LOC111019802 PE=4 SV=1)

HSP 1 Score: 119 bits (297), Expect = 6.02e-34
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59
          MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD
Sbjct: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59

[Close]

BLAST of MC00g0848 vs. ExPASy TrEMBL
Match: A0A6J1KHY0 (uncharacterized protein LOC111493381 OS=Cucurbita maxima OX=3661 GN=LOC111493381 PE=4 SV=1)

HSP 1 Score: 109 bits (273), Expect = 3.00e-30
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59
          MAGLLG + LAPKTKN+VVAGGLTAFVFGVYFYTMRAVGG+DELQVAIDQFEAQK NKD
Sbjct: 1  MAGLLGLRGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKD 59

[Close]

BLAST of MC00g0848 vs. ExPASy TrEMBL
Match: A0A6J1GXM1 (uncharacterized protein LOC111458133 OS=Cucurbita moschata OX=3662 GN=LOC111458133 PE=4 SV=1)

HSP 1 Score: 109 bits (273), Expect = 3.00e-30
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59
          MAGLLG + LAPKTKN+VVAGGLTAFVFGVYFYTMRAVGG+DELQVAIDQFEAQK NKD
Sbjct: 1  MAGLLGLRGLAPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKDNKD 59

[Close]

BLAST of MC00g0848 vs. ExPASy TrEMBL
Match: A0A5A7SUP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002370 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 6.07e-30
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59
          MAGLLGY  L PKTKN+VVAGGLTAFVFGVYFYTMRAVGG+DELQVAID+FEAQKSNK+
Sbjct: 1  MAGLLGYSGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDKFEAQKSNKE 59

[Close]

BLAST of MC00g0848 vs. ExPASy TrEMBL
Match: A0A1S4DW05 (uncharacterized protein LOC103488878 OS=Cucumis melo OX=3656 GN=LOC103488878 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 6.07e-30
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQKSNKD 59
          MAGLLGY  L PKTKN+VVAGGLTAFVFGVYFYTMRAVGG+DELQVAID+FEAQKSNK+
Sbjct: 1  MAGLLGYSGLGPKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDKFEAQKSNKE 59

[Close]

BLAST of MC00g0848 vs. TAIR 10
Match: AT2G43780.1 (unknown protein; Has 30 Blast hits to 30 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 3.7e-19
Identity = 45/55 (81.82%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQK 56
          MAG  G+  L PK KN VVAGGLTAFVFGVYFYTMRAVGGTDELQVAID+FE QK
Sbjct: 1  MAGFPGFSYLGPKGKNTVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDKFEGQK 55

[Close]

BLAST of MC00g0848 vs. TAIR 10
Match: AT2G43780.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 3.7e-19
Identity = 45/55 (81.82%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 1  MAGLLGYKSLAPKTKNVVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDQFEAQK 56
          MAG  G+  L PK KN VVAGGLTAFVFGVYFYTMRAVGGTDELQVAID+FE QK
Sbjct: 1  MAGFPGFSYLGPKGKNTVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDKFEGQK 55

The following BLAST results are available for this feature:

BLAST of MC00g0848 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g0848 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151963.1	1.24e-33	100.00	uncharacterized protein LOC111019802 [Momordica charantia] >XP_022151965.1 uncha...	[more]
XP_038891345.1	2.16e-30	89.83	uncharacterized protein LOC120080790 [Benincasa hispida] >XP_038891346.1 unchara...	[more]
XP_022956375.1	6.20e-30	89.83	uncharacterized protein LOC111458133 [Cucurbita moschata] >XP_022998843.1 unchar...	[more]
XP_016900171.1	1.25e-29	88.14	PREDICTED: uncharacterized protein LOC103488878 [Cucumis melo] >KAA0034183.1 unc...	[more]
KAG6601607.1	2.14e-29	89.83	hypothetical protein SDJN03_06840, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC00g0848 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DG74	6.02e-34	100.00	uncharacterized protein LOC111019802 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1KHY0	3.00e-30	89.83	uncharacterized protein LOC111493381 OS=Cucurbita maxima OX=3661 GN=LOC111493381...	[more]
A0A6J1GXM1	3.00e-30	89.83	uncharacterized protein LOC111458133 OS=Cucurbita moschata OX=3662 GN=LOC1114581...	[more]
A0A5A7SUP4	6.07e-30	88.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DW05	6.07e-30	88.14	uncharacterized protein LOC103488878 OS=Cucumis melo OX=3656 GN=LOC103488878 PE=...	[more]

BLAST of MC00g0848 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43780.1	3.7e-19	81.82	unknown protein; Has 30 Blast hits to 30 proteins in 11 species: Archae - 0; Bac...	[more]
AT2G43780.2	3.7e-19	81.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36744	CYTOCHROME OXIDASE ASSEMBLY PROTEIN	coord: 1..58
None	No IPR available	PANTHER	PTHR36744:SF2	CYTOCHROME OXIDASE ASSEMBLY PROTEIN	coord: 1..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0848.1	MC00g0848.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane