MC00g0518 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC00g0518
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein EMB-1-like
Locationscaffold196: 635600 .. 636362 (+)
RNA-Seq ExpressionMC00g0518
SyntenyMC00g0518
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCGGAGCAGGAGAGGTGTGAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCGTCCCTGGTGGAACTGGGGGCAAGAGTCTCGAAGCTCAGGAACACCTTGCTGAAGGTGTCGATTTAACGACTCTCTCACATTCTATATTTCTAATATTACAGGATTTCATACTTCTTTTTATTTACTGCCTATATTAACAGTTCTTTTATTTATTATTTATTATATTCAAACATATTAGCAGTATATTTACTGCTGATATTCAGCAATTCTTTCATCATTATATTAACATCATATTACGTCAATGATGTTGATACATTTATTTCATTGTCATATCAACATCATATTAAAAATGACATTAAAAATGACGTAGATATCATCAAAATGTAGGATTTATTGAGAGAGGTATGATACTTTCGTAATACCAAAAATGGTTTCATGTTTCTCTATTTCAACACTTGAAAATATTTAAAATGATGCTGACGTGGCTTTCTAATCCAACCTTGACAAATCAACATGGCCTAAGATTTGACTCCATATAACCCCTCAGAAAGTCTCATATATTTACTAACAAAAGGAGATTGTTTCTAACTTTGATGTGACGTAGGGCGGAGCCGTGGGGGGCAGACAAGGAAGGAGCAGCTGGGCCACGAAGGGTACCAACAGATGGGCCGCAAAGGAGGGCTAAGCAACACGGGTCTCTCGGGCGGAGAGCGCGCTGCCGAGGAAGGCGTTGAGATTGATGAGTCCAAATTCAGGACCAAA

mRNA sequence

ATGTCGTCGGAGCAGGAGAGGTGTGAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCGTCCCTGGTGGAACTGGGGGCAAGAGTCTCGAAGCTCAGGAACACCTTGCTGAAGGGCGGAGCCGTGGGGGGCAGACAAGGAAGGAGCAGCTGGGCCACGAAGGGTACCAACAGATGGGCCGCAAAGGAGGGCTAAGCAACACGGGTCTCTCGGGCGGAGAGCGCGCTGCCGAGGAAGGCGTTGAGATTGATGAGTCCAAATTCAGGACCAAA

Coding sequence (CDS)

ATGTCGTCGGAGCAGGAGAGGTGTGAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCGTCCCTGGTGGAACTGGGGGCAAGAGTCTCGAAGCTCAGGAACACCTTGCTGAAGGGCGGAGCCGTGGGGGGCAGACAAGGAAGGAGCAGCTGGGCCACGAAGGGTACCAACAGATGGGCCGCAAAGGAGGGCTAAGCAACACGGGTCTCTCGGGCGGAGAGCGCGCTGCCGAGGAAGGCGTTGAGATTGATGAGTCCAAATTCAGGACCAAA

Protein sequence

MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
Homology
BLAST of MC00g0518 vs. ExPASy Swiss-Prot
Match: P17639 (Protein EMB-1 OS=Daucus carota OX=4039 GN=EMB-1 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 7.3e-35
Identity = 75/91 (82.42%), Postives = 85/91 (93.41%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          M+S+QE+ ELDARARQGETVVPGGTGGKSLEAQ+HLAEGRS+GGQTRKEQLG EGY +MG
Sbjct: 1  MASQQEKKELDARARQGETVVPGGTGGKSLEAQQHLAEGRSKGGQTRKEQLGGEGYHEMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 92
          RKGGLSN  +SGGERA +EG++IDESKFRTK
Sbjct: 61 RKGGLSNNDMSGGERAEQEGIDIDESKFRTK 91

BLAST of MC00g0518 vs. ExPASy Swiss-Prot
Match: P42755 (Em protein H5 OS=Triticum aestivum OX=4565 GN=EMH5 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.6e-32
Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 0

Query: 2  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGR 61
          S +QER ELD  AR+GETVVPGGTGGKSLEAQEHLA+GRSRGG+TRKEQLG EGY++MGR
Sbjct: 3  SGQQERSELDRMAREGETVVPGGTGGKSLEAQEHLADGRSRGGETRKEQLGEEGYREMGR 62

Query: 62 KGGLSNTGLSGGERAAEEGVEIDESKFRTK 92
          KGGLS    SGGERAA EG+EIDESKF+TK
Sbjct: 63 KGGLSTMEESGGERAAREGIEIDESKFKTK 92

BLAST of MC00g0518 vs. ExPASy Swiss-Prot
Match: Q02973 (Em-like protein GEA6 OS=Arabidopsis thaliana OX=3702 GN=EM6 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.4e-32
Identity = 73/91 (80.22%), Postives = 80/91 (87.91%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          M+S+QE+ +LD RA++GETVVPGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQQMG
Sbjct: 1  MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQLGTEGYQQMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 92
          RKGGLS     GGE A EEGVEIDESKFRTK
Sbjct: 61 RKGGLSTGDKPGGEHAEEEGVEIDESKFRTK 91

BLAST of MC00g0518 vs. ExPASy Swiss-Prot
Match: P04568 (Em protein OS=Triticum aestivum OX=4565 GN=EM PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-31
Identity = 69/90 (76.67%), Postives = 80/90 (88.89%), Query Frame = 0

Query: 2  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGR 61
          S +QER +LD +AR+GETVVPGGTGGKSLEAQE+LAEGRSRGGQTR+EQ+G EGY QMGR
Sbjct: 3  SGQQERSQLDRKAREGETVVPGGTGGKSLEAQENLAEGRSRGGQTRREQMGEEGYSQMGR 62

Query: 62 KGGLSNTGLSGGERAAEEGVEIDESKFRTK 92
          KGGLS    SGG+RAA EG++IDESKF+TK
Sbjct: 63 KGGLSTNDESGGDRAAREGIDIDESKFKTK 92

BLAST of MC00g0518 vs. ExPASy Swiss-Prot
Match: Q05190 (Late embryogenesis abundant protein B19.1A OS=Hordeum vulgare OX=4513 GN=B19.1A PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.7e-31
Identity = 68/90 (75.56%), Postives = 81/90 (90.00%), Query Frame = 0

Query: 2  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGR 61
          S +QER +LD +AR+GETVVPGGTGGKSLEAQ++LAEGRSRGGQTR+EQ+G EGY +MGR
Sbjct: 3  SGQQERSQLDRKAREGETVVPGGTGGKSLEAQQNLAEGRSRGGQTRREQMGQEGYSEMGR 62

Query: 62 KGGLSNTGLSGGERAAEEGVEIDESKFRTK 92
          KGGLS+   SGGERAA EG++IDESKF+TK
Sbjct: 63 KGGLSSNDESGGERAAREGIDIDESKFKTK 92

BLAST of MC00g0518 vs. NCBI nr
Match: XP_022144068.1 (protein EMB-1-like [Momordica charantia])

HSP 1 Score: 177 bits (448), Expect = 1.07e-55
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG
Sbjct: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91
          RKGGLSNTGLSGGERAAEEGVEIDESKFRTK
Sbjct: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91

BLAST of MC00g0518 vs. NCBI nr
Match: XP_022949998.1 (protein EMB-1 [Cucurbita moschata] >XP_022978323.1 protein EMB-1 [Cucurbita maxima] >XP_023543342.1 protein EMB-1 [Cucurbita pepo subsp. pepo] >KAG6603576.1 Protein EMB-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169 bits (429), Expect = 8.47e-53
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MG
Sbjct: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91
          RKGGLSN+G+ GGERAAEEGVEIDESKFR K
Sbjct: 61 RKGGLSNSGMPGGERAAEEGVEIDESKFRAK 91

BLAST of MC00g0518 vs. NCBI nr
Match: XP_008464209.1 (PREDICTED: protein EMB-1-like [Cucumis melo] >KAA0037756.1 protein EMB-1-like [Cucumis melo var. makuwa] >TYK29242.1 protein EMB-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 168 bits (425), Expect = 3.67e-52
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MG
Sbjct: 1  MSSEQERGELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91
          RKGGLSNTG+SGGERAAEEGVEIDESKF TK
Sbjct: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFTTK 91

BLAST of MC00g0518 vs. NCBI nr
Match: XP_004148611.1 (protein EMB-1 [Cucumis sativus] >KGN54388.1 hypothetical protein Csa_018191 [Cucumis sativus])

HSP 1 Score: 166 bits (421), Expect = 1.41e-51
Identity = 85/91 (93.41%), Postives = 89/91 (97.80%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MG
Sbjct: 1  MSSEQERGKLDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91
          RKGGLSNTG+SGGERAAEEGVEIDESKFR K
Sbjct: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFRNK 91

BLAST of MC00g0518 vs. NCBI nr
Match: KAG7033764.1 (Em-like protein GEA1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169 bits (429), Expect = 2.34e-51
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0

Query: 1   MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
           MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MG
Sbjct: 107 MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 166

Query: 61  RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91
           RKGGLSN+G+ GGERAAEEGVEIDESKFR K
Sbjct: 167 RKGGLSNSGMPGGERAAEEGVEIDESKFRAK 197

BLAST of MC00g0518 vs. ExPASy TrEMBL
Match: A0A6J1CSC5 (protein EMB-1-like OS=Momordica charantia OX=3673 GN=LOC111013847 PE=3 SV=1)

HSP 1 Score: 177 bits (448), Expect = 5.17e-56
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG
Sbjct: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91
          RKGGLSNTGLSGGERAAEEGVEIDESKFRTK
Sbjct: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91

BLAST of MC00g0518 vs. ExPASy TrEMBL
Match: A0A6J1ISS4 (protein EMB-1 OS=Cucurbita maxima OX=3661 GN=LOC111478344 PE=3 SV=1)

HSP 1 Score: 169 bits (429), Expect = 4.10e-53
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MG
Sbjct: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91
          RKGGLSN+G+ GGERAAEEGVEIDESKFR K
Sbjct: 61 RKGGLSNSGMPGGERAAEEGVEIDESKFRAK 91

BLAST of MC00g0518 vs. ExPASy TrEMBL
Match: A0A6J1GDN9 (protein EMB-1 OS=Cucurbita moschata OX=3662 GN=LOC111453222 PE=3 SV=1)

HSP 1 Score: 169 bits (429), Expect = 4.10e-53
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MG
Sbjct: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91
          RKGGLSN+G+ GGERAAEEGVEIDESKFR K
Sbjct: 61 RKGGLSNSGMPGGERAAEEGVEIDESKFRAK 91

BLAST of MC00g0518 vs. ExPASy TrEMBL
Match: A0A5D3E041 (Protein EMB-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00020 PE=3 SV=1)

HSP 1 Score: 168 bits (425), Expect = 1.78e-52
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MG
Sbjct: 1  MSSEQERGELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91
          RKGGLSNTG+SGGERAAEEGVEIDESKF TK
Sbjct: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFTTK 91

BLAST of MC00g0518 vs. ExPASy TrEMBL
Match: A0A1S3CKY4 (protein EMB-1-like OS=Cucumis melo OX=3656 GN=LOC103502143 PE=3 SV=1)

HSP 1 Score: 168 bits (425), Expect = 1.78e-52
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MG
Sbjct: 1  MSSEQERGELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 91
          RKGGLSNTG+SGGERAAEEGVEIDESKF TK
Sbjct: 61 RKGGLSNTGMSGGERAAEEGVEIDESKFTTK 91

BLAST of MC00g0518 vs. TAIR 10
Match: AT2G40170.1 (Stress induced protein )

HSP 1 Score: 138.7 bits (348), Expect = 2.4e-33
Identity = 73/91 (80.22%), Postives = 80/91 (87.91%), Query Frame = 0

Query: 1  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMG 60
          M+S+QE+ +LD RA++GETVVPGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQQMG
Sbjct: 1  MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQLGTEGYQQMG 60

Query: 61 RKGGLSNTGLSGGERAAEEGVEIDESKFRTK 92
          RKGGLS     GGE A EEGVEIDESKFRTK
Sbjct: 61 RKGGLSTGDKPGGEHAEEEGVEIDESKFRTK 91

BLAST of MC00g0518 vs. TAIR 10
Match: AT3G51810.1 (Stress induced protein )

HSP 1 Score: 107.8 bits (268), Expect = 4.5e-24
Identity = 71/150 (47.33%), Postives = 77/150 (51.33%), Query Frame = 0

Query: 2   SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ---- 61
           S +  R ELD +A+QGETVVPGGTGG SLEAQEHLAEGRS+GGQTRKEQLGHEGYQ    
Sbjct: 3   SKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEIGH 62

Query: 62  --------------------------------------------------------QMGR 92
                                                                   +MGR
Sbjct: 63  KGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYKEMGR 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P176397.3e-3582.42Protein EMB-1 OS=Daucus carota OX=4039 GN=EMB-1 PE=1 SV=1[more]
P427552.6e-3280.00Em protein H5 OS=Triticum aestivum OX=4565 GN=EMH5 PE=2 SV=1[more]
Q029733.4e-3280.22Em-like protein GEA6 OS=Arabidopsis thaliana OX=3702 GN=EM6 PE=2 SV=1[more]
P045682.2e-3176.67Em protein OS=Triticum aestivum OX=4565 GN=EM PE=2 SV=1[more]
Q051903.7e-3175.56Late embryogenesis abundant protein B19.1A OS=Hordeum vulgare OX=4513 GN=B19.1A ... [more]
Match NameE-valueIdentityDescription
XP_022144068.11.07e-55100.00protein EMB-1-like [Momordica charantia][more]
XP_022949998.18.47e-5394.51protein EMB-1 [Cucurbita moschata] >XP_022978323.1 protein EMB-1 [Cucurbita maxi... [more]
XP_008464209.13.67e-5295.60PREDICTED: protein EMB-1-like [Cucumis melo] >KAA0037756.1 protein EMB-1-like [C... [more]
XP_004148611.11.41e-5193.41protein EMB-1 [Cucumis sativus] >KGN54388.1 hypothetical protein Csa_018191 [Cuc... [more]
KAG7033764.12.34e-5194.51Em-like protein GEA1, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
A0A6J1CSC55.17e-56100.00protein EMB-1-like OS=Momordica charantia OX=3673 GN=LOC111013847 PE=3 SV=1[more]
A0A6J1ISS44.10e-5394.51protein EMB-1 OS=Cucurbita maxima OX=3661 GN=LOC111478344 PE=3 SV=1[more]
A0A6J1GDN94.10e-5394.51protein EMB-1 OS=Cucurbita moschata OX=3662 GN=LOC111453222 PE=3 SV=1[more]
A0A5D3E0411.78e-5295.60Protein EMB-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G... [more]
A0A1S3CKY41.78e-5295.60protein EMB-1-like OS=Cucumis melo OX=3656 GN=LOC103502143 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G40170.12.4e-3380.22Stress induced protein [more]
AT3G51810.14.5e-2447.33Stress induced protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038956Late embryogenesis abundant protein, LEA_5 subgroupPFAMPF00477LEA_5coord: 2..52
e-value: 5.9E-23
score: 81.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..91
NoneNo IPR availablePANTHERPTHR34671:SF13SUBFAMILY NOT NAMEDcoord: 1..91
IPR000389Small hydrophilic plant seed proteinPANTHERPTHR34671EM-LIKE PROTEIN GEA1coord: 1..91
IPR022377Small hydrophilic plant seed protein, conserved sitePROSITEPS00431SMALL_HYDR_PLANT_SEEDcoord: 17..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC00g0518.1MC00g0518.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048700 acquisition of desiccation tolerance in seed
biological_process GO:0009737 response to abscisic acid