MC00g0513 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0513
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	BHLH domain-containing protein
Location	scaffold196: 563730 .. 564302 (+)
RNA-Seq Expression	MC00g0513
Synteny	MC00g0513

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTACAGCTTTCCGACGAGCAACCCCAGCTCGTGTGGCTCGTCCTCCGGCGGCGGCGGCGGCGGAGGAGAGATCAACAAAAAAGAGAAGATGAAGAAGAGCGGCGGCGGTTGCAGCGACGGCGGAGGGAAGAGGAGCAAAGGAGTGGTGAAGCTGTCGACGGACCCACAAAGCGTGGCGGCGAGAGAGCGACGGCACAGAATCAGCGACCGGTTCAAGATTCTGCAGAGCTTAGTCCCCGGTGGCACCAAAATGGACACCGTCTCTATGCTCGATGAGGCCATTCATTATGTCAAATTCTTGAAAACCCAGATTTGGCTTCATCAAACCATGATCAATTTCGTTGATTATGACGTGGCGGCGGCCACGGCGAGCTCCTCCCTCCCTCTGGACCCCAGCGGCGGCGATTACTGCAGCAACGTGAATAACATTAACAACAACATTCTGTACACTCCAAACGACGTCGTCAAAATGGAGGAGCCGTTTTTGCCACCGCAGTTGGATCCCACCGGCTACTACTCCTCAGGACAAGACCAATTCATGTGCTCTTATGATGCTTACATGAACTTC

mRNA sequence

ATGGATTACAGCTTTCCGACGAGCAACCCCAGCTCGTGTGGCTCGTCCTCCGGCGGCGGCGGCGGCGGAGGAGAGATCAACAAAAAAGAGAAGATGAAGAAGAGCGGCGGCGGTTGCAGCGACGGCGGAGGGAAGAGGAGCAAAGGAGTGGTGAAGCTGTCGACGGACCCACAAAGCGTGGCGGCGAGAGAGCGACGGCACAGAATCAGCGACCGGTTCAAGATTCTGCAGAGCTTAGTCCCCGGTGGCACCAAAATGGACACCGTCTCTATGCTCGATGAGGCCATTCATTATGTCAAATTCTTGAAAACCCAGATTTGGCTTCATCAAACCATGATCAATTTCGTTGATTATGACGTGGCGGCGGCCACGGCGAGCTCCTCCCTCCCTCTGGACCCCAGCGGCGGCGATTACTGCAGCAACGTGAATAACATTAACAACAACATTCTGTACACTCCAAACGACGTCGTCAAAATGGAGGAGCCGTTTTTGCCACCGCAGTTGGATCCCACCGGCTACTACTCCTCAGGACAAGACCAATTCATGTGCTCTTATGATGCTTACATGAACTTC

Coding sequence (CDS)

ATGGATTACAGCTTTCCGACGAGCAACCCCAGCTCGTGTGGCTCGTCCTCCGGCGGCGGCGGCGGCGGAGGAGAGATCAACAAAAAAGAGAAGATGAAGAAGAGCGGCGGCGGTTGCAGCGACGGCGGAGGGAAGAGGAGCAAAGGAGTGGTGAAGCTGTCGACGGACCCACAAAGCGTGGCGGCGAGAGAGCGACGGCACAGAATCAGCGACCGGTTCAAGATTCTGCAGAGCTTAGTCCCCGGTGGCACCAAAATGGACACCGTCTCTATGCTCGATGAGGCCATTCATTATGTCAAATTCTTGAAAACCCAGATTTGGCTTCATCAAACCATGATCAATTTCGTTGATTATGACGTGGCGGCGGCCACGGCGAGCTCCTCCCTCCCTCTGGACCCCAGCGGCGGCGATTACTGCAGCAACGTGAATAACATTAACAACAACATTCTGTACACTCCAAACGACGTCGTCAAAATGGAGGAGCCGTTTTTGCCACCGCAGTTGGATCCCACCGGCTACTACTCCTCAGGACAAGACCAATTCATGTGCTCTTATGATGCTTACATGAACTTC

Protein sequence

MDYSFPTSNPSSCGSSSGGGGGGGEINKKEKMKKSGGGCSDGGGKRSKGVVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDVAAATASSSLPLDPSGGDYCSNVNNINNNILYTPNDVVKMEEPFLPPQLDPTGYYSSGQDQFMCSYDAYMNF

Homology

[Close]

BLAST of MC00g0513 vs. ExPASy Swiss-Prot
Match: Q9M041 (Transcription factor bHLH140 OS=Arabidopsis thaliana OX=3702 GN=BHLH140 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.2e-24
Identity = 70/138 (50.72%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 2   DYSFPTSNPSSCGSSSGGGGGGGEINKKEKMKKSGGGCSDGGGKRSKGVVKLSTDPQSVA 61
           D++  + NP+S  S++         +K E           G  KRS+    LSTDPQSVA
Sbjct: 3   DFNLRSENPNS-SSTTSSSSSSFHRHKSE----------TGNTKRSRSTSTLSTDPQSVA 62

Query: 62  ARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFV-DYDV 121
           AR+RRHRISDRFKILQS+VPGG KMDTVSMLDEAI YVKFLK QIW HQ M+ F+ D++ 
Sbjct: 63  ARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQIWYHQNMLLFINDHE- 122

Query: 122 AAATASSSLPLDPSGGDY 139
                +SS    P  G++
Sbjct: 123 ----TTSSCTYSPGAGEF 124

[Close]

BLAST of MC00g0513 vs. ExPASy Swiss-Prot
Match: Q7XAQ6 (Transcription factor LAX PANICLE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX1 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.5e-23
Identity = 68/147 (46.26%), Postives = 87/147 (59.18%), Query Frame = 0


Query: 36  GGGCSDGGGKRSKGVVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEA 95
           G G   GGG+R  G  KLSTDPQSVAARERRHRISDRF++L+SLVPGG+KMDTVSML++A
Sbjct: 24  GEGRMRGGGRRRPG-AKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQA 83

Query: 96  IHYVKFLKTQIWLHQTMINFVDYDVAAATASSSLPLDPSGGDYCSNVNNINNNILYTPND 155
           IHYVKFLK Q+ LHQ  +  V ++     A  +     +  D    +N+ +       +D
Sbjct: 84  IHYVKFLKAQVTLHQAAL--VQHEEGCQHADVAAAFSAADADLALELNHRHGG---AGDD 143

Query: 156 VVKMEEPFLPPQLDPTGYYSSGQDQFM 183
              M    + P  +  GY      Q M
Sbjct: 144 DAGMTTLEMAPMQEAVGYGDGPAHQMM 164

[Close]

BLAST of MC00g0513 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.9e-18
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 51  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 107
           V++S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAIHYVKFLK Q+
Sbjct: 126 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 181

[Close]

BLAST of MC00g0513 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.9e-18
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 51  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 107
           V++S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAIHYVKFLK Q+
Sbjct: 123 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 178

[Close]

BLAST of MC00g0513 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-17
Identity = 44/82 (53.66%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 51  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQ 110
           VK+STDPQ+VAAR+RR RIS++ ++LQ+LVPGGTKMDT SMLDEA +Y+KFL+ Q+   +
Sbjct: 273 VKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332

Query: 111 TMINFVDY-DVAAATASSSLPL 132
            +   +D  +++ ++A +S PL
Sbjct: 333 NLRPKLDQTNLSFSSAPTSFPL 354

[Close]

BLAST of MC00g0513 vs. NCBI nr
Match: XP_022144026.1 (transcription factor LAX PANICLE [Momordica charantia])

HSP 1 Score: 323 bits (827), Expect = 9.71e-111
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 32  MKKSGGGCSDGGGKRSKGVVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSM 91
           MKKSGGGCSDGGGKRSKGVVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSM
Sbjct: 1   MKKSGGGCSDGGGKRSKGVVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSM 60

Query: 92  LDEAIHYVKFLKTQIWLHQTMINFVDYDVAAATASSSLPLDPSGGDYCSNVNNINNNILY 151
           LDEAIHYVKFLKTQIWLHQTMINFVDYDVAAATASSSLPLDPSGGDYCSNVNNINNNILY
Sbjct: 61  LDEAIHYVKFLKTQIWLHQTMINFVDYDVAAATASSSLPLDPSGGDYCSNVNNINNNILY 120

Query: 152 TPNDVVKMEEPFLPPQLDPTGYYSSGQDQFMCSYDAYMNF 191
           TPNDVVKMEEPFLPPQLDPTGYYSSGQDQFMCSYDAYMNF
Sbjct: 121 TPNDVVKMEEPFLPPQLDPTGYYSSGQDQFMCSYDAYMNF 160

[Close]

BLAST of MC00g0513 vs. NCBI nr
Match: XP_022978297.1 (transcription factor LAX PANICLE 1 [Cucurbita maxima])

HSP 1 Score: 249 bits (636), Expect = 2.76e-81
Identity = 146/199 (73.37%), Postives = 158/199 (79.40%), Query Frame = 0


Query: 1   MDYSFPTSNPSSCGSSSGGGGGGGEINKKEKMKKSGGGCSDGGGKRSKGVVKLSTDPQSV 60
           MDYSFP SNPSSCGSSSGG GG     ++EKMKK+GGG   GGGKRSKGV+KLSTDPQSV
Sbjct: 1   MDYSFPASNPSSCGSSSGGDGG---ETRREKMKKNGGGS--GGGKRSKGVMKLSTDPQSV 60

Query: 61  AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD- 120
           AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD 
Sbjct: 61  AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDD 120

Query: 121 ---VAAATASSSLPLD--PSGGDYCSNVNNINNNILYTPNDVVKMEEPFLPPQLDPTG-Y 180
               +AATA+ + P    P GGD          N +++ N+VVKMEEPFLP  LDP   Y
Sbjct: 121 PSSSSAATAAVNCPNSGIPVGGDM---------NFVFSENEVVKMEEPFLP-HLDPDNIY 180

Query: 181 YSSGQDQFMCS-YDAYMNF 191
           + SGQDQFMCS YDAYMNF
Sbjct: 181 FPSGQDQFMCSSYDAYMNF 184

[Close]

BLAST of MC00g0513 vs. NCBI nr
Match: KAG6603572.1 (Transcription factor basic helix-loop-helix 140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 247 bits (630), Expect = 2.76e-80
Identity = 146/203 (71.92%), Postives = 157/203 (77.34%), Query Frame = 0


Query: 1   MDYSFPTSNPSSCGSSSGGGGGGGEINKKEKMKKSGGGCSDG--GGKRSKGVVKLSTDPQ 60
           MDYSFP SNPSSCGSSSGG GG     +KEKMKK+GGG   G  GGKR+KGV+KLSTDPQ
Sbjct: 1   MDYSFPASNPSSCGSSSGGDGG---ETRKEKMKKNGGGSGSGSGGGKRTKGVMKLSTDPQ 60

Query: 61  SVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDY 120
           SVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDY
Sbjct: 61  SVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDY 120

Query: 121 D------VAAATASSSLPLD--PSGGDYCSNVNNINNNILYTPNDVVKMEEPFLPPQLDP 180
           D       AAATA+++ P    P GGD          N ++  N+VVKMEE FLP  LDP
Sbjct: 121 DDPSSSSSAAATAAANCPNSGIPVGGDM---------NFVFPENEVVKMEEAFLP-HLDP 180

Query: 181 TG-YYSSGQDQFMCS-YDAYMNF 191
              Y+ SGQDQFMCS YDAYMNF
Sbjct: 181 DNIYFPSGQDQFMCSSYDAYMNF 190

[Close]

BLAST of MC00g0513 vs. NCBI nr
Match: XP_023545106.1 (transcription factor LAX PANICLE 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241 bits (615), Expect = 4.94e-78
Identity = 139/201 (69.15%), Postives = 156/201 (77.61%), Query Frame = 0


Query: 1   MDYSFPTSNPSSCGSSSGGGGGGGEINKKEKMKKSGGG--CSDGGGKRSKGVVKLSTDPQ 60
           MDYSFP SNPSSCGSSSGG GG     +KEKMKK+GGG     GGGKRSKGV+KLSTDPQ
Sbjct: 1   MDYSFPASNPSSCGSSSGGDGG---ETRKEKMKKNGGGGGSGSGGGKRSKGVMKLSTDPQ 60

Query: 61  SVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDY 120
           SVAARERRHRISDRFKILQSLVPGG KMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDY
Sbjct: 61  SVAARERRHRISDRFKILQSLVPGGNKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDY 120

Query: 121 DVAAATASSSLPLD------PSGGDYCSNVNNINNNILYTPNDVVKMEEPFLPPQLDPTG 180
           D  +++++++  ++      P GGD          N ++  N+VVKMEE FLP  LDP  
Sbjct: 121 DDPSSSSAAATAVNCPNSGIPVGGDM---------NFVFPENEVVKMEEAFLP-HLDPDN 180

Query: 181 -YYSSGQDQFMCS-YDAYMNF 191
            Y+ SGQDQFMCS +DAYMNF
Sbjct: 181 IYFPSGQDQFMCSSFDAYMNF 188

[Close]

BLAST of MC00g0513 vs. NCBI nr
Match: XP_038883835.1 (transcription factor LAX PANICLE 1 [Benincasa hispida])

HSP 1 Score: 241 bits (614), Expect = 7.49e-78
Identity = 143/205 (69.76%), Postives = 156/205 (76.10%), Query Frame = 0


Query: 1   MDYSFPTSNPSSCGSSSGGGGGGGEINKKEKMKKSGGGCSDGGGKRSKGVVKLSTDPQSV 60
           MDY+FPTSNPSSCGSSSGGGG       KEKMKK+    ++GGGKRSKGVVKLSTDPQSV
Sbjct: 1   MDYNFPTSNPSSCGSSSGGGG-------KEKMKKN---INNGGGKRSKGVVKLSTDPQSV 60

Query: 61  AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD- 120
           AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD 
Sbjct: 61  AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDP 120

Query: 121 ---VAAATASSSLPLDP-SGGDYCSNVNNINNNILYTPNDVVKMEEPFLPPQLDPTG--- 180
               AAA A+S LP D  +GG+Y +N+N      L + NDVVKMEEP   PQLDP     
Sbjct: 121 SSATAAAAANSGLPFDQIAGGEYNNNMN-----FLCSQNDVVKMEEPNFLPQLDPNYNNN 180

Query: 181 -----YYSSGQDQFMCS-YDAYMNF 191
                + S  QDQF+ S YD Y+NF
Sbjct: 181 NNNLYFPSDHQDQFISSSYDPYINF 190

[Close]

BLAST of MC00g0513 vs. ExPASy TrEMBL
Match: A0A6J1CS34 (transcription factor LAX PANICLE OS=Momordica charantia OX=3673 GN=LOC111013818 PE=4 SV=1)

HSP 1 Score: 323 bits (827), Expect = 4.70e-111
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 32  MKKSGGGCSDGGGKRSKGVVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSM 91
           MKKSGGGCSDGGGKRSKGVVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSM
Sbjct: 1   MKKSGGGCSDGGGKRSKGVVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSM 60

Query: 92  LDEAIHYVKFLKTQIWLHQTMINFVDYDVAAATASSSLPLDPSGGDYCSNVNNINNNILY 151
           LDEAIHYVKFLKTQIWLHQTMINFVDYDVAAATASSSLPLDPSGGDYCSNVNNINNNILY
Sbjct: 61  LDEAIHYVKFLKTQIWLHQTMINFVDYDVAAATASSSLPLDPSGGDYCSNVNNINNNILY 120

Query: 152 TPNDVVKMEEPFLPPQLDPTGYYSSGQDQFMCSYDAYMNF 191
           TPNDVVKMEEPFLPPQLDPTGYYSSGQDQFMCSYDAYMNF
Sbjct: 121 TPNDVVKMEEPFLPPQLDPTGYYSSGQDQFMCSYDAYMNF 160

[Close]

BLAST of MC00g0513 vs. ExPASy TrEMBL
Match: A0A6J1IKQ9 (transcription factor LAX PANICLE 1 OS=Cucurbita maxima OX=3661 GN=LOC111478325 PE=4 SV=1)

HSP 1 Score: 249 bits (636), Expect = 1.33e-81
Identity = 146/199 (73.37%), Postives = 158/199 (79.40%), Query Frame = 0


Query: 1   MDYSFPTSNPSSCGSSSGGGGGGGEINKKEKMKKSGGGCSDGGGKRSKGVVKLSTDPQSV 60
           MDYSFP SNPSSCGSSSGG GG     ++EKMKK+GGG   GGGKRSKGV+KLSTDPQSV
Sbjct: 1   MDYSFPASNPSSCGSSSGGDGG---ETRREKMKKNGGGS--GGGKRSKGVMKLSTDPQSV 60

Query: 61  AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD- 120
           AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD 
Sbjct: 61  AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDD 120

Query: 121 ---VAAATASSSLPLD--PSGGDYCSNVNNINNNILYTPNDVVKMEEPFLPPQLDPTG-Y 180
               +AATA+ + P    P GGD          N +++ N+VVKMEEPFLP  LDP   Y
Sbjct: 121 PSSSSAATAAVNCPNSGIPVGGDM---------NFVFSENEVVKMEEPFLP-HLDPDNIY 180

Query: 181 YSSGQDQFMCS-YDAYMNF 191
           + SGQDQFMCS YDAYMNF
Sbjct: 181 FPSGQDQFMCSSYDAYMNF 184

[Close]

BLAST of MC00g0513 vs. ExPASy TrEMBL
Match: A0A5A7T6E1 (HLH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00320 PE=4 SV=1)

HSP 1 Score: 240 bits (612), Expect = 8.35e-78
Identity = 143/205 (69.76%), Postives = 154/205 (75.12%), Query Frame = 0


Query: 1   MDYSFPTSNPSSCGSSSGGGGGGGEINKKEKMKKSGGGCSDGGGKRSKGVVKLSTDPQSV 60
           MDY+FP SNPSSCGSSSGGGGG      KEKMKK+      G GKRSKGVVKLSTDPQSV
Sbjct: 1   MDYNFPASNPSSCGSSSGGGGG------KEKMKKNNNNNHGGAGKRSKGVVKLSTDPQSV 60

Query: 61  AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDV 120
           AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD 
Sbjct: 61  AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDS 120

Query: 121 -------AAATASSSLPLDP-SGGDYCSNVNNINNNILYTPNDVVKMEEPFLPPQLDPTG 180
                  AAATA+S  P +  + G+Y    NN+NN +LY  NDVVKMEEP   PQLDP  
Sbjct: 121 NSSAAVSAAATANSGFPFEQIASGEY----NNMNN-LLYPQNDVVKMEEPNFLPQLDPNN 180

Query: 181 -----YYSSGQDQFMCS-YDAYMNF 191
                + S  QDQF+ S YD Y+NF
Sbjct: 181 NNNVYFPSDHQDQFISSSYDPYINF 194

[Close]

BLAST of MC00g0513 vs. ExPASy TrEMBL
Match: A0A0A0KXM0 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G312280 PE=4 SV=1)

HSP 1 Score: 240 bits (612), Expect = 8.63e-78
Identity = 145/205 (70.73%), Postives = 156/205 (76.10%), Query Frame = 0


Query: 1   MDYSFPTSNPSSCGSSSGGGGGGGEINKKEKMKKSGGGCSDGGGKRSKGVVKLSTDPQSV 60
           MDY+FP SNPSSCGSSSGGGGGGG    KEKMKK+      G GKRSKGVVKLSTDPQSV
Sbjct: 1   MDYNFPASNPSSCGSSSGGGGGGG----KEKMKKNNNNHG-GAGKRSKGVVKLSTDPQSV 60

Query: 61  AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDV 120
           AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD 
Sbjct: 61  AARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYDS 120

Query: 121 -------AAATASSSLPLDP-SGGDYCSNVNNINNNILYTPNDVVKMEEPFLPPQLDPTG 180
                  AAATA+S  P +  + G+Y    NN+NN +LY  NDVVKMEEP   PQLDP  
Sbjct: 121 NSSAAVSAAATANSGFPFEQIASGEY----NNMNN-LLYPQNDVVKMEEPNFLPQLDPNN 180

Query: 181 -----YYSSGQDQFMCS-YDAYMNF 191
                + S  QDQF+ S YD Y+NF
Sbjct: 181 NNNVYFPSDHQDQFISSSYDPYINF 195

[Close]

BLAST of MC00g0513 vs. ExPASy TrEMBL
Match: A0A6J1EVF6 (transcription factor bHLH140 OS=Cucurbita moschata OX=3662 GN=LOC111438152 PE=4 SV=1)

HSP 1 Score: 237 bits (605), Expect = 9.68e-77
Identity = 143/202 (70.79%), Postives = 155/202 (76.73%), Query Frame = 0


Query: 1   MDYSFPTSNPSSCGSSSGGGGGGGEINKKEKMKK-SGGGCSDGGGKRSKGVVKLSTDPQS 60
           MDY+FP SNPSSCGSSSGG   G    +KEK+KK S G C   GGKRSKGVVKLSTDPQS
Sbjct: 1   MDYTFPASNPSSCGSSSGGATTG--ATRKEKLKKNSSGSC---GGKRSKGVVKLSTDPQS 60

Query: 61  VAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD 120
           VAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD
Sbjct: 61  VAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFVDYD 120

Query: 121 ------VAAATASSSLPLDP-SGGDYCSNVNNINNNILYTPNDVVKMEEP-FLPPQLDPT 180
                  AAA  +     D  +GG++    NN  N+ +Y+ NDVVKMEEP  L PQLDP 
Sbjct: 121 DSSNSTAAAAAVNCGFHFDQIAGGEFH---NNDTNSFVYSQNDVVKMEEPPNLLPQLDPN 180

Query: 181 G-YYSSGQDQFMCS-YDAYMNF 191
             Y+ SGQDQ+MCS YD YMNF
Sbjct: 181 NLYFPSGQDQYMCSSYDPYMNF 194

[Close]

BLAST of MC00g0513 vs. TAIR 10
Match: AT5G01310.1 (APRATAXIN-like )

HSP 1 Score: 112.8 bits (281), Expect = 3.0e-25
Identity = 70/138 (50.72%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 2   DYSFPTSNPSSCGSSSGGGGGGGEINKKEKMKKSGGGCSDGGGKRSKGVVKLSTDPQSVA 61
           D++  + NP+S  S++         +K E           G  KRS+    LSTDPQSVA
Sbjct: 3   DFNLRSENPNS-SSTTSSSSSSFHRHKSE----------TGNTKRSRSTSTLSTDPQSVA 62

Query: 62  ARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQTMINFV-DYDV 121
           AR+RRHRISDRFKILQS+VPGG KMDTVSMLDEAI YVKFLK QIW HQ M+ F+ D++ 
Sbjct: 63  ARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQIWYHQNMLLFINDHE- 122

Query: 122 AAATASSSLPLDPSGGDY 139
                +SS    P  G++
Sbjct: 123 ----TTSSCTYSPGAGEF 124

[Close]

BLAST of MC00g0513 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 7.1e-19
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 51  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 107
           V++S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAIHYVKFLK Q+
Sbjct: 123 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 178

[Close]

BLAST of MC00g0513 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 7.1e-19
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 51  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 107
           V++S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAIHYVKFLK Q+
Sbjct: 126 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 181

[Close]

BLAST of MC00g0513 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-18
Identity = 44/82 (53.66%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 51  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWLHQ 110
           VK+STDPQ+VAAR+RR RIS++ ++LQ+LVPGGTKMDT SMLDEA +Y+KFL+ Q+   +
Sbjct: 273 VKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332

Query: 111 TMINFVDY-DVAAATASSSLPL 132
            +   +D  +++ ++A +S PL
Sbjct: 333 NLRPKLDQTNLSFSSAPTSFPL 354

[Close]

BLAST of MC00g0513 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-18
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 0


Query: 51  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIWL 109
           V++S DPQSVAAR RR RIS+R +ILQ LVPGGTKMDT SMLDEAI YVKFLK QI L
Sbjct: 123 VRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL 180

The following BLAST results are available for this feature:

BLAST of MC00g0513 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M041	4.2e-24	50.72	Transcription factor bHLH140 OS=Arabidopsis thaliana OX=3702 GN=BHLH140 PE=3 SV=...	[more]
Q7XAQ6	3.5e-23	46.26	Transcription factor LAX PANICLE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=L...	[more]
Q9FHA7	9.9e-18	78.57	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9SND4	9.9e-18	78.57	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q8S3D2	4.9e-17	53.66	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]

BLAST of MC00g0513 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144026.1	9.71e-111	100.00	transcription factor LAX PANICLE [Momordica charantia]	[more]
XP_022978297.1	2.76e-81	73.37	transcription factor LAX PANICLE 1 [Cucurbita maxima]	[more]
KAG6603572.1	2.76e-80	71.92	Transcription factor basic helix-loop-helix 140, partial [Cucurbita argyrosperma...	[more]
XP_023545106.1	4.94e-78	69.15	transcription factor LAX PANICLE 1 [Cucurbita pepo subsp. pepo]	[more]
XP_038883835.1	7.49e-78	69.76	transcription factor LAX PANICLE 1 [Benincasa hispida]	[more]

BLAST of MC00g0513 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CS34	4.70e-111	100.00	transcription factor LAX PANICLE OS=Momordica charantia OX=3673 GN=LOC111013818 ...	[more]
A0A6J1IKQ9	1.33e-81	73.37	transcription factor LAX PANICLE 1 OS=Cucurbita maxima OX=3661 GN=LOC111478325 P...	[more]
A0A5A7T6E1	8.35e-78	69.76	HLH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A0A0KXM0	8.63e-78	70.73	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G312280 PE=4 S...	[more]
A0A6J1EVF6	9.68e-77	70.79	transcription factor bHLH140 OS=Cucurbita moschata OX=3662 GN=LOC111438152 PE=4 ...	[more]

BLAST of MC00g0513 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01310.1	3.0e-25	50.72	APRATAXIN-like	[more]
AT3G50330.1	7.1e-19	78.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	7.1e-19	78.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	3.5e-18	53.66	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	3.5e-18	77.59	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 59..108 e-value: 1.6E-12 score: 57.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 63..102 e-value: 1.4E-7 score: 31.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 53..102 score: 15.357671
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 56..115 e-value: 3.0E-10 score: 42.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 58..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR45914:SF2	TRANSCRIPTION FACTOR LAX PANICLE 1	coord: 35..148
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 35..148
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 54..113 e-value: 4.50576E-40 score: 128.664

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0513.1	MC00g0513.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity