MC00g0491 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0491
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Seed maturation protein PM41
Location	scaffold196: 414585 .. 414818 (+)
RNA-Seq Expression	MC00g0491
Synteny	MC00g0491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGAGCACAGGGAGCGCAGCCGAAGGATTCGTTGACGGCGACGACTTACGGGTCCGTTCCCGGCGGCGACAACCGGACCAGGACGGACATCCGGTCGCGGGAGGATGCGGGCATGATCCAGATCGACAAGCTTCAGGACAAAGTGGAGGATCCCGCCGGTAAGGGCGGCCCCGTCTTCGGCGCCGGCAAAGATGACAACAAACAAGACCTCGGAGTTACCGGCACCGGC

mRNA sequence

ATGTCGGGAGCACAGGGAGCGCAGCCGAAGGATTCGTTGACGGCGACGACTTACGGGTCCGTTCCCGGCGGCGACAACCGGACCAGGACGGACATCCGGTCGCGGGAGGATGCGGGCATGATCCAGATCGACAAGCTTCAGGACAAAGTGGAGGATCCCGCCGGTAAGGGCGGCCCCGTCTTCGGCGCCGGCAAAGATGACAACAAACAAGACCTCGGAGTTACCGGCACCGGC

Coding sequence (CDS)

ATGTCGGGAGCACAGGGAGCGCAGCCGAAGGATTCGTTGACGGCGACGACTTACGGGTCCGTTCCCGGCGGCGACAACCGGACCAGGACGGACATCCGGTCGCGGGAGGATGCGGGCATGATCCAGATCGACAAGCTTCAGGACAAAGTGGAGGATCCCGCCGGTAAGGGCGGCCCCGTCTTCGGCGCCGGCAAAGATGACAACAAACAAGACCTCGGAGTTACCGGCACCGGC

Protein sequence

MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPVFGAGKDDNKQDLGVTGTG

Homology

[Close]

BLAST of MC00g0491 vs. NCBI nr
Match: XP_022144058.1 (uncharacterized protein LOC111013841 [Momordica charantia])

HSP 1 Score: 154 bits (390), Expect = 3.16e-47
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60
          MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV
Sbjct: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60

Query: 61 FGAGKDDNKQDLGVTGTG 78
          FGAGKDDNKQDLGVTGTG
Sbjct: 61 FGAGKDDNKQDLGVTGTG 78

[Close]

BLAST of MC00g0491 vs. NCBI nr
Match: XP_022949816.1 (uncharacterized protein LOC111453100 [Cucurbita moschata])

HSP 1 Score: 140 bits (354), Expect = 9.31e-42
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60
          MSGAQGAQPKDS TATTY SVPGG+NRTRTD+RSREDAGMIQIDKLQDKVED AGKGGPV
Sbjct: 1  MSGAQGAQPKDSFTATTYESVPGGENRTRTDLRSREDAGMIQIDKLQDKVEDAAGKGGPV 60

Query: 61 FGAGKDDNKQDLGVTGTG 78
          FGAGKDD KQDLGV+GTG
Sbjct: 61 FGAGKDDKKQDLGVSGTG 78

[Close]

BLAST of MC00g0491 vs. NCBI nr
Match: XP_023544782.1 (uncharacterized protein LOC111804271 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140 bits (354), Expect = 1.08e-41
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60
          MSGAQGAQPKDS TATTY SVPGG+NRTRTD+RSREDAGMIQIDKLQDKVED AGKGGPV
Sbjct: 1  MSGAQGAQPKDSFTATTYESVPGGENRTRTDLRSREDAGMIQIDKLQDKVEDAAGKGGPV 60

Query: 61 FGAGKDDNKQDLGVTGTG 78
          FGAGKDD KQDLGV+GTG
Sbjct: 61 FGAGKDDKKQDLGVSGTG 78

[Close]

BLAST of MC00g0491 vs. NCBI nr
Match: XP_022978324.1 (uncharacterized protein LOC111478345 [Cucurbita maxima])

HSP 1 Score: 139 bits (350), Expect = 3.80e-41
Identity = 70/78 (89.74%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60
          MSGAQGAQPKDS TATTY SVPGG+NRTRTD+RSREDAGMIQIDKLQDKVED AGKGGPV
Sbjct: 1  MSGAQGAQPKDSFTATTYESVPGGENRTRTDLRSREDAGMIQIDKLQDKVEDAAGKGGPV 60

Query: 61 FGAGKDDNKQDLGVTGTG 78
          FGAGKD+ KQDLGV+GTG
Sbjct: 61 FGAGKDEKKQDLGVSGTG 78

[Close]

BLAST of MC00g0491 vs. NCBI nr
Match: XP_038883613.1 (uncharacterized protein LOC120074530 [Benincasa hispida])

HSP 1 Score: 138 bits (348), Expect = 7.67e-41
Identity = 69/78 (88.46%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60
          MSGAQGAQPK+S TATTY SVPGG+NRT+TD+RSREDAGMIQIDKLQDKV+D AGKGGPV
Sbjct: 1  MSGAQGAQPKESFTATTYESVPGGENRTKTDLRSREDAGMIQIDKLQDKVQDAAGKGGPV 60

Query: 61 FGAGKDDNKQDLGVTGTG 78
          FGAGKDD KQDLGVTGTG
Sbjct: 61 FGAGKDDKKQDLGVTGTG 78

[Close]

BLAST of MC00g0491 vs. ExPASy TrEMBL
Match: A0A6J1CS91 (uncharacterized protein LOC111013841 OS=Momordica charantia OX=3673 GN=LOC111013841 PE=4 SV=1)

HSP 1 Score: 154 bits (390), Expect = 1.53e-47
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60
          MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV
Sbjct: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60

Query: 61 FGAGKDDNKQDLGVTGTG 78
          FGAGKDDNKQDLGVTGTG
Sbjct: 61 FGAGKDDNKQDLGVTGTG 78

[Close]

BLAST of MC00g0491 vs. ExPASy TrEMBL
Match: A0A6J1GD40 (uncharacterized protein LOC111453100 OS=Cucurbita moschata OX=3662 GN=LOC111453100 PE=4 SV=1)

HSP 1 Score: 140 bits (354), Expect = 4.51e-42
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60
          MSGAQGAQPKDS TATTY SVPGG+NRTRTD+RSREDAGMIQIDKLQDKVED AGKGGPV
Sbjct: 1  MSGAQGAQPKDSFTATTYESVPGGENRTRTDLRSREDAGMIQIDKLQDKVEDAAGKGGPV 60

Query: 61 FGAGKDDNKQDLGVTGTG 78
          FGAGKDD KQDLGV+GTG
Sbjct: 61 FGAGKDDKKQDLGVSGTG 78

[Close]

BLAST of MC00g0491 vs. ExPASy TrEMBL
Match: A0A6J1ITS5 (uncharacterized protein LOC111478345 OS=Cucurbita maxima OX=3661 GN=LOC111478345 PE=4 SV=1)

HSP 1 Score: 139 bits (350), Expect = 1.84e-41
Identity = 70/78 (89.74%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60
          MSGAQGAQPKDS TATTY SVPGG+NRTRTD+RSREDAGMIQIDKLQDKVED AGKGGPV
Sbjct: 1  MSGAQGAQPKDSFTATTYESVPGGENRTRTDLRSREDAGMIQIDKLQDKVEDAAGKGGPV 60

Query: 61 FGAGKDDNKQDLGVTGTG 78
          FGAGKD+ KQDLGV+GTG
Sbjct: 61 FGAGKDEKKQDLGVSGTG 78

[Close]

BLAST of MC00g0491 vs. ExPASy TrEMBL
Match: A0A0A0KY41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314500 PE=4 SV=1)

HSP 1 Score: 137 bits (346), Expect = 7.50e-41
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60
          MSGAQGAQPK+S TATTY SV GG+NRTRTDIRSREDAGMIQIDK+QDKVED AGKGGPV
Sbjct: 1  MSGAQGAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPV 60

Query: 61 FGAGKDDNKQDLGVTGTG 78
          FGAGKDD KQDLGVTGTG
Sbjct: 61 FGAGKDDKKQDLGVTGTG 78

[Close]

BLAST of MC00g0491 vs. ExPASy TrEMBL
Match: A0A5D3BF74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold67599G00010 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 1.51e-40
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60
          MSGAQGAQPK+S TATTY SV GG+NRTRTDIRSREDAGMIQIDKLQDKVED AGKGGPV
Sbjct: 1  MSGAQGAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKLQDKVEDAAGKGGPV 60

Query: 61 FGAGKDDNKQDLGVTGTG 78
          FGAGK+D KQDLGVTGTG
Sbjct: 61 FGAGKEDKKQDLGVTGTG 78

[Close]

BLAST of MC00g0491 vs. TAIR 10
Match: AT2G21820.1 (unknown protein; Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 9.9e-28
Identity = 61/78 (78.21%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 1  MSGAQGAQPKDSLTATTYGSVPGGDNRTRTDIRSREDAGMIQIDKLQDKVEDPAGKGGPV 60
          MSGAQGA+P DS TATTY SV GG N+T+ DIRS+ED G IQ+DKLQDKV D AG GGPV
Sbjct: 1  MSGAQGAEPMDSRTATTYESVEGGQNKTKLDIRSKEDEGGIQVDKLQDKVSDAAGLGGPV 60

Query: 61 FGAGKDDNKQDLGVTGTG 79
          FGAGKDD KQDLGVTGTG
Sbjct: 61 FGAGKDDKKQDLGVTGTG 78

The following BLAST results are available for this feature:

BLAST of MC00g0491 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g0491 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144058.1	3.16e-47	100.00	uncharacterized protein LOC111013841 [Momordica charantia]	[more]
XP_022949816.1	9.31e-42	91.03	uncharacterized protein LOC111453100 [Cucurbita moschata]	[more]
XP_023544782.1	1.08e-41	91.03	uncharacterized protein LOC111804271 [Cucurbita pepo subsp. pepo]	[more]
XP_022978324.1	3.80e-41	89.74	uncharacterized protein LOC111478345 [Cucurbita maxima]	[more]
XP_038883613.1	7.67e-41	88.46	uncharacterized protein LOC120074530 [Benincasa hispida]	[more]

BLAST of MC00g0491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CS91	1.53e-47	100.00	uncharacterized protein LOC111013841 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1GD40	4.51e-42	91.03	uncharacterized protein LOC111453100 OS=Cucurbita moschata OX=3662 GN=LOC1114531...	[more]
A0A6J1ITS5	1.84e-41	89.74	uncharacterized protein LOC111478345 OS=Cucurbita maxima OX=3661 GN=LOC111478345...	[more]
A0A0A0KY41	7.50e-41	89.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314500 PE=4 SV=1	[more]
A0A5D3BF74	1.51e-40	89.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MC00g0491 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21820.1	9.9e-28	78.21	unknown protein; Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..78
None	No IPR available	PANTHER	PTHR36012:SF2	OS01G0654400 PROTEIN	coord: 1..78
None	No IPR available	PANTHER	PTHR36012	OS01G0654400 PROTEIN	coord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0491.1	MC00g0491.1	mRNA