MC00g0479 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0479
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribosomal protein S3
Location	scaffold196: 266192 .. 266601 (-)
RNA-Seq Expression	MC00g0479
Synteny	MC00g0479

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGCCGAAGCCAAAAAGAGGTTGACCCACTTCATTCGCCAAGCGAATGATCTTCGTTTCGCGGGAACAACAAAGACAACCATCTCGCGCTTTCCTTTCTTCGGTGCTACCTTTTTCTTTCCAAGGGAGGAGGTTGGGATGTATAAAAACCTTTTTTTGAGGATACCCGGGAACAACTCCTAGGTCAATTAAGGATCAAATGTTGGAACCTCATGGGTAAGTATAAGGTAATAGAATTGATACAGAAATTCATAGACCTAGGTGGGATAGAAGAATTGATAAAGGGAAGAAACAGAAGAATTCCGTATGGGTACAACTCTTATTTGAACGAAGGGAAAAAAATGCAATCTTTGTTGTCTAATAGAACAAAAACTAATACCTTAATTGAGTCCGTCAAGATCAAATCTGTA

mRNA sequence

TTGGCCGAAGCCAAAAAGAGGTTGACCCACTTCATTCGCCAAGCGAATGATCTTCGTTTCGCGGGAACAACAAAGACAACCATCTCGCGCTTTCCTTTCTTCGGTGCTACCTTTTTCTTTCCAAGGGAGGAGGTTGGGATGTATAAAAACTTTTTTGAGGATACCCGGGAACAACTCCTAGGTCAATTAAGGATCAAATGTTGGAACCTCATGGGTAAGTATAAGGTAATAGAATTGATACAGAAATTCATAGACCTAGGTGGGATAGAAGAATTGATAAAGGGAAGAAACAGAAGAATTCCGTATGGGTACAACTCTTATTTGAACGAAGGGAAAAAAATGCAATCTTTGTTGTCTAATAGAACAAAAACTAATACCTTAATTGAGTCCGTCAAGATCAAATCTGTA

Coding sequence (CDS)

TTGGCCGAAGCCAAAAAGAGGTTGACCCACTTCATTCGCCAAGCGAATGATCTTCGTTTCGCGGGAACAACAAAGACAACCATCTCGCGCTTTCCTTTCTTCGGTGCTACCTTTTTCTTTCCAAGGGAGGAGGTTGGGATGTATAAAAACTTTTTTGAGGATACCCGGGAACAACTCCTAGGTCAATTAAGGATCAAATGTTGGAACCTCATGGGTAAGTATAAGGTAATAGAATTGATACAGAAATTCATAGACCTAGGTGGGATAGAAGAATTGATAAAGGGAAGAAACAGAAGAATTCCGTATGGGTACAACTCTTATTTGAACGAAGGGAAAAAAATGCAATCTTTGTTGTCTAATAGAACAAAAACTAATACCTTAATTGAGTCCGTCAAGATCAAATCTGTA

Protein sequence

LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKNFFEDTREQLLGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKGRNRRIPYGYNSYLNEGKKMQSLLSNRTKTNTLIESVKIKSV

Homology

[Close]

BLAST of MC00g0479 vs. ExPASy Swiss-Prot
Match: P27754 (Ribosomal protein S3, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS3 PE=3 SV=2)

HSP 1 Score: 218.8 bits (556), Expect = 3.8e-56
Identity = 117/146 (80.14%), Postives = 124/146 (84.93%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LAE KK L HFIRQ NDLRFAG TKTTIS FPFFGATFFFPR+ VG+YK+ FFED REQL
Sbjct: 304 LAEDKKGLPHFIRQENDLRFAGRTKTTISLFPFFGATFFFPRDGVGVYKHLFFEDAREQL 363

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKCW LMGK KV+ELI+KFIDLGGI ELIKG         RNRRIPYGYNSYLNE
Sbjct: 364 LGQLRIKCWKLMGKDKVMELIEKFIDLGGIGELIKGIEIMIEIILRNRRIPYGYNSYLNE 423

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 137
            KKM+SLLSNRTKTNT+IESVKIKSV
Sbjct: 424 VKKMRSLLSNRTKTNTIIESVKIKSV 449

[Close]

BLAST of MC00g0479 vs. ExPASy Swiss-Prot
Match: Q04716 (Ribosomal protein S3, mitochondrial OS=Petunia hybrida OX=4102 GN=YRPS3 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.9e-55
Identity = 116/146 (79.45%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LAEAKKR+THFIRQANDLRFAGTTKTTIS FPFFGATFFFPR+ VG+Y N FFED REQL
Sbjct: 303 LAEAKKRVTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAREQL 362

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLR KCWNLMGK KV+ELI+KFIDL  I ELI+G         RNRRIPYGYN YLNE
Sbjct: 363 LGQLRRKCWNLMGKDKVMELIEKFIDLNRIGELIRGIEMMIEIILRNRRIPYGYNYYLNE 422

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 137
            KKM+SLL NRT TNTLIESVKIKSV
Sbjct: 423 VKKMRSLLYNRTNTNTLIESVKIKSV 448

[Close]

BLAST of MC00g0479 vs. ExPASy Swiss-Prot
Match: P27928 (Ribosomal protein S3, mitochondrial OS=Zea mays OX=4577 GN=RPS3 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 9.8e-52
Identity = 112/146 (76.71%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LA AKKRL HFIRQANDLRFAGTTKTTIS FPFFGATFFF R+ VG+Y N F+E  REQL
Sbjct: 300 LARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFFSRDGVGVYNNPFYEYAREQL 359

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKC NLMGK KV+ELI+KFIDLG I +LIKG         R RRIPYGYNSYLNE
Sbjct: 360 LGQLRIKCRNLMGKDKVMELIEKFIDLGRIGKLIKGIEMMIEIILRKRRIPYGYNSYLNE 419

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 137
            +KM+S LSNRT TNTLIESVKIKSV
Sbjct: 420 VQKMRSFLSNRTNTNTLIESVKIKSV 445

[Close]

BLAST of MC00g0479 vs. ExPASy Swiss-Prot
Match: P46773 (Ribosomal protein S3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RPS3 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.9e-51
Identity = 112/146 (76.71%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LA AKKRL HFIRQANDLRFAGTTKTTIS FPFFGATFFFPR+ VG+Y N FFE  REQL
Sbjct: 279 LARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNPFFEYAREQL 338

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKC NLMGK KV+ELI+KFI LG I +LIKG         R R IPYGYNSYLNE
Sbjct: 339 LGQLRIKCRNLMGKDKVMELIEKFIYLGRIGKLIKGIEMMIEIILRKRIIPYGYNSYLNE 398

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 137
            +KM+S LSNRT TNTLIESVKIKSV
Sbjct: 399 VQKMRSFLSNRTNTNTLIESVKIKSV 424

[Close]

BLAST of MC00g0479 vs. ExPASy Swiss-Prot
Match: P49386 (Ribosomal protein S3, mitochondrial OS=Brassica napus OX=3708 GN=RPS3 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.6e-47
Identity = 104/145 (71.72%), Postives = 112/145 (77.24%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKNFFEDTREQLL 60
           LAEAK RLTH IR ANDL FAGTTKTTIS FPFFGATFFF R+ VG+  N   D REQLL
Sbjct: 302 LAEAKNRLTHLIRLANDLGFAGTTKTTISLFPFFGATFFFLRDGVGVTNNL--DAREQLL 361

Query: 61  GQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNEG 120
            QLR+KCWNL+GK KV+ELI+KF DLGGIEELIK          R R IPYGYNSY NE 
Sbjct: 362 NQLRVKCWNLLGKDKVMELIEKFKDLGGIEELIKVIDMMIEIILRKRGIPYGYNSYFNEV 421

Query: 121 KKMQSLLSNRTKTNTLIESVKIKSV 137
           +KM+S LSNRT T TLIESVKIKSV
Sbjct: 422 QKMRSFLSNRTNTKTLIESVKIKSV 444

[Close]

BLAST of MC00g0479 vs. NCBI nr
Match: YP_009913654.1 (ribosomal protein S3 [Luffa acutangula] >QLJ93023.1 ribosomal protein S3 [Luffa acutangula])

HSP 1 Score: 239 bits (611), Expect = 9.65e-74
Identity = 128/146 (87.67%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LAEAKKRLTHFIRQANDLRFAGTTKTTIS FPFFGATFFFPR+ VGMYKN FFEDTREQL
Sbjct: 302 LAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTREQL 361

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKCWNLMGK KVIELI+KFIDLGGI ELIKG         RNRRIPYGYNSYLNE
Sbjct: 362 LGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNSYLNE 421

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 136
            KKM+SLLSNRTKTNTLIESVKIKSV
Sbjct: 422 VKKMRSLLSNRTKTNTLIESVKIKSV 447

[Close]

BLAST of MC00g0479 vs. NCBI nr
Match: YP_003587231.1 (ribosomal protein S3 [Citrullus lanatus] >ACV96652.1 ribosomal protein S3 [Citrullus lanatus])

HSP 1 Score: 239 bits (611), Expect = 1.01e-73
Identity = 128/146 (87.67%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LAEAKKRLTHFIRQANDLRFAGTTKTTIS FPFFGATFFFPR+ VGMYKN FFEDTREQL
Sbjct: 304 LAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTREQL 363

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKCWNLMGK KVIELI+KFIDLGGI ELIKG         RNRRIPYGYNSYLNE
Sbjct: 364 LGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNSYLNE 423

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 136
            KKM+SLLSNRTKTNTLIESVKIKSV
Sbjct: 424 VKKMRSLLSNRTKTNTLIESVKIKSV 449

[Close]

BLAST of MC00g0479 vs. NCBI nr
Match: ADL63932.1 (ribosomal protein S3, partial [Lophozonia moorei])

HSP 1 Score: 236 bits (601), Expect = 3.93e-73
Identity = 124/146 (84.93%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LAEAKKRLTHFIRQANDLRFAGTTKTTIS FPFFGATFFFPR+EVGMY N FFED REQL
Sbjct: 236 LAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDEVGMYNNLFFEDAREQL 295

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKCWNLMGK +V+ELI+KFIDLGGI ELIKG         RNRRIPYGYNSYLNE
Sbjct: 296 LGQLRIKCWNLMGKDRVMELIEKFIDLGGIGELIKGIEMMIERILRNRRIPYGYNSYLNE 355

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 136
            KKM+SLLSNRTKTNTLIES+KIKSV
Sbjct: 356 VKKMRSLLSNRTKTNTLIESIKIKSV 381

[Close]

BLAST of MC00g0479 vs. NCBI nr
Match: ADL63826.1 (ribosomal protein S3, partial [Datisca cannabina])

HSP 1 Score: 235 bits (600), Expect = 9.83e-73
Identity = 126/146 (86.30%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LAEAKKRLTHFIRQANDLRFAGTTKTTIS FPFFGATFFFPR+ VGMYKN FFEDTREQL
Sbjct: 250 LAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTREQL 309

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKCWNLMGK KVIE I+KFIDLGGI ELIKG         RNRRIPYGYNSYLNE
Sbjct: 310 LGQLRIKCWNLMGKDKVIEWIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNSYLNE 369

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 136
            KKM+SLLSNRT TNTLIESVKIKSV
Sbjct: 370 VKKMRSLLSNRTNTNTLIESVKIKSV 395

[Close]

BLAST of MC00g0479 vs. NCBI nr
Match: WP_165001735.1 (hypothetical protein [Candidatus Frankia datiscae])

HSP 1 Score: 233 bits (594), Expect = 1.84e-72
Identity = 125/146 (85.62%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LAEAKKRLTHFIRQANDLRFAGTTKTTIS FPFFGATFFFPR+ VGMYKN FFEDTREQL
Sbjct: 183 LAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTREQL 242

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKCWNLMGK KVIELI K IDLGGI E IKG         RNRRIPYGYNSYLNE
Sbjct: 243 LGQLRIKCWNLMGKDKVIELIDKLIDLGGIGEFIKGIEMMIEIILRNRRIPYGYNSYLNE 302

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 136
            KKM+SLLSNRT TNTLIESVKIKSV
Sbjct: 303 VKKMRSLLSNRTNTNTLIESVKIKSV 328

[Close]

BLAST of MC00g0479 vs. ExPASy TrEMBL
Match: A0A7D6C3M1 (Ribosomal protein S3 OS=Luffa acutangula OX=56866 GN=rps3 PE=3 SV=1)

HSP 1 Score: 239 bits (611), Expect = 4.67e-74
Identity = 128/146 (87.67%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LAEAKKRLTHFIRQANDLRFAGTTKTTIS FPFFGATFFFPR+ VGMYKN FFEDTREQL
Sbjct: 302 LAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTREQL 361

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKCWNLMGK KVIELI+KFIDLGGI ELIKG         RNRRIPYGYNSYLNE
Sbjct: 362 LGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNSYLNE 421

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 136
            KKM+SLLSNRTKTNTLIESVKIKSV
Sbjct: 422 VKKMRSLLSNRTKTNTLIESVKIKSV 447

[Close]

BLAST of MC00g0479 vs. ExPASy TrEMBL
Match: D5I3A1 (Ribosomal protein S3 OS=Citrullus lanatus OX=3654 GN=rps3 PE=3 SV=1)

HSP 1 Score: 239 bits (611), Expect = 4.89e-74
Identity = 128/146 (87.67%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LAEAKKRLTHFIRQANDLRFAGTTKTTIS FPFFGATFFFPR+ VGMYKN FFEDTREQL
Sbjct: 304 LAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTREQL 363

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKCWNLMGK KVIELI+KFIDLGGI ELIKG         RNRRIPYGYNSYLNE
Sbjct: 364 LGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNSYLNE 423

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 136
            KKM+SLLSNRTKTNTLIESVKIKSV
Sbjct: 424 VKKMRSLLSNRTKTNTLIESVKIKSV 449

[Close]

BLAST of MC00g0479 vs. ExPASy TrEMBL
Match: E5DMB4 (Ribosomal protein S3 (Fragment) OS=Lophozonia moorei OX=28946 GN=rps3 PE=3 SV=1)

HSP 1 Score: 236 bits (601), Expect = 1.90e-73
Identity = 124/146 (84.93%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LAEAKKRLTHFIRQANDLRFAGTTKTTIS FPFFGATFFFPR+EVGMY N FFED REQL
Sbjct: 236 LAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDEVGMYNNLFFEDAREQL 295

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKCWNLMGK +V+ELI+KFIDLGGI ELIKG         RNRRIPYGYNSYLNE
Sbjct: 296 LGQLRIKCWNLMGKDRVMELIEKFIDLGGIGELIKGIEMMIERILRNRRIPYGYNSYLNE 355

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 136
            KKM+SLLSNRTKTNTLIES+KIKSV
Sbjct: 356 VKKMRSLLSNRTKTNTLIESIKIKSV 381

[Close]

BLAST of MC00g0479 vs. ExPASy TrEMBL
Match: E5DM08 (Ribosomal protein S3 (Fragment) OS=Datisca cannabina OX=34296 GN=rps3 PE=3 SV=1)

HSP 1 Score: 235 bits (600), Expect = 4.76e-73
Identity = 126/146 (86.30%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           LAEAKKRLTHFIRQANDLRFAGTTKTTIS FPFFGATFFFPR+ VGMYKN FFEDTREQL
Sbjct: 250 LAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTREQL 309

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKCWNLMGK KVIE I+KFIDLGGI ELIKG         RNRRIPYGYNSYLNE
Sbjct: 310 LGQLRIKCWNLMGKDKVIEWIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNSYLNE 369

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 136
            KKM+SLLSNRT TNTLIESVKIKSV
Sbjct: 370 VKKMRSLLSNRTNTNTLIESVKIKSV 395

[Close]

BLAST of MC00g0479 vs. ExPASy TrEMBL
Match: E5FJD9 (Ribosomal protein S3 (Fragment) OS=Croton lechleri OX=323063 GN=rps3 PE=3 SV=1)

HSP 1 Score: 226 bits (577), Expect = 3.16e-72
Identity = 120/146 (82.19%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKN-FFEDTREQL 60
           L+EAKKRLTHFIRQ NDLRFAGTTKTTIS FPFFGATFFFPR+ VG+Y N FFED REQL
Sbjct: 46  LSEAKKRLTHFIRQTNDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAREQL 105

Query: 61  LGQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNE 120
           LGQLRIKCWNLMGK KV+ELI+KFI+LGGI ELIKG         RNRRIPYGYNSYLNE
Sbjct: 106 LGQLRIKCWNLMGKDKVMELIEKFINLGGIGELIKGIEMMIEIILRNRRIPYGYNSYLNE 165

Query: 121 GKKMQSLLSNRTKTNTLIESVKIKSV 136
            KKM+SLLSNRT TNTLIESVKIKSV
Sbjct: 166 MKKMRSLLSNRTNTNTLIESVKIKSV 191

[Close]

BLAST of MC00g0479 vs. TAIR 10
Match: ATMG00090.1 (structural constituent of ribosome;protein binding )

HSP 1 Score: 187.2 bits (474), Expect = 8.8e-48
Identity = 103/145 (71.03%), Postives = 112/145 (77.24%), Query Frame = 0


Query: 1   LAEAKKRLTHFIRQANDLRFAGTTKTTISRFPFFGATFFFPREEVGMYKNFFEDTREQLL 60
           LAEAK RLTHFIR ANDLRFAGTTKTTIS FPFFGATFFF R+ VG+Y N   D REQLL
Sbjct: 303 LAEAKNRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFLRDGVGVYNNL--DAREQLL 362

Query: 61  GQLRIKCWNLMGKYKVIELIQKFIDLGGIEELIKG---------RNRRIPYGYNSYLNEG 120
            QLR+KCWNL+GK K++ELI+K  +LGGIEELIK          R R IPY YNSY  E 
Sbjct: 363 NQLRVKCWNLVGKDKIMELIEKLKNLGGIEELIKVIDMMIEIILRKRGIPYRYNSYFYEV 422

Query: 121 KKMQSLLSNRTKTNTLIESVKIKSV 137
           KKM+S LSNRT T TLIESVKIKSV
Sbjct: 423 KKMRSFLSNRTNTKTLIESVKIKSV 445

The following BLAST results are available for this feature:

BLAST of MC00g0479 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27754	3.8e-56	80.14	Ribosomal protein S3, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS3 PE=3...	[more]
Q04716	1.9e-55	79.45	Ribosomal protein S3, mitochondrial OS=Petunia hybrida OX=4102 GN=YRPS3 PE=2 SV=...	[more]
P27928	9.8e-52	76.71	Ribosomal protein S3, mitochondrial OS=Zea mays OX=4577 GN=RPS3 PE=3 SV=1	[more]
P46773	4.9e-51	76.71	Ribosomal protein S3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
P49386	5.6e-47	71.72	Ribosomal protein S3, mitochondrial OS=Brassica napus OX=3708 GN=RPS3 PE=3 SV=1	[more]

BLAST of MC00g0479 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009913654.1	9.65e-74	87.67	ribosomal protein S3 [Luffa acutangula] >QLJ93023.1 ribosomal protein S3 [Luffa ...	[more]
YP_003587231.1	1.01e-73	87.67	ribosomal protein S3 [Citrullus lanatus] >ACV96652.1 ribosomal protein S3 [Citru...	[more]
ADL63932.1	3.93e-73	84.93	ribosomal protein S3, partial [Lophozonia moorei]	[more]
ADL63826.1	9.83e-73	86.30	ribosomal protein S3, partial [Datisca cannabina]	[more]
WP_165001735.1	1.84e-72	85.62	hypothetical protein [Candidatus Frankia datiscae]	[more]

BLAST of MC00g0479 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D6C3M1	4.67e-74	87.67	Ribosomal protein S3 OS=Luffa acutangula OX=56866 GN=rps3 PE=3 SV=1	[more]
D5I3A1	4.89e-74	87.67	Ribosomal protein S3 OS=Citrullus lanatus OX=3654 GN=rps3 PE=3 SV=1	[more]
E5DMB4	1.90e-73	84.93	Ribosomal protein S3 (Fragment) OS=Lophozonia moorei OX=28946 GN=rps3 PE=3 SV=1	[more]
E5DM08	4.76e-73	86.30	Ribosomal protein S3 (Fragment) OS=Datisca cannabina OX=34296 GN=rps3 PE=3 SV=1	[more]
E5FJD9	3.16e-72	82.19	Ribosomal protein S3 (Fragment) OS=Croton lechleri OX=323063 GN=rps3 PE=3 SV=1	[more]

BLAST of MC00g0479 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00090.1	8.8e-48	71.03	structural constituent of ribosome;protein binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044954	Ribosomal protein S3, mitochondrial, plant	PANTHER	PTHR35928	RIBOSOMAL PROTEIN S3, MITOCHONDRIAL	coord: 1..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0479.1	MC00g0479.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome