MC00g0377 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC00g0377
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDUF1985 domain-containing protein
Locationscaffold7: 654924 .. 655163 (-)
RNA-Seq ExpressionMC00g0377
SyntenyMC00g0377
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAATATCCATGGGACGTGTTTCTTTTTACATAACAATAGAGTCAATTAAAAAAGCCATAAAAAATCTAGATGCAACGATTGTTGGTTTAAATGGAATGTCTTTCGTACTGTTGATTTGGGCATATGAGTGCATACGACTGTTATATTATGAGAAAACCCCATATAGAAAACACATATCTTCTGAGATACCTCTAATGGTTAATTTGGAGGCTGACGTACACTCAGAATGGAGGGAGATA

mRNA sequence

GCAATATCCATGGGACGTGTTTCTTTTTACATAACAATAGAGTCAATTAAAAAAGCCATAAAAAATCTAGATGCAACGATTGTTGGTTTAAATGGAATGTCTTTCGTACTGTTGATTTGGGCATATGAGTGCATACGACTGTTATATTATGAGAAAACCCCATATAGAAAACACATATCTTCTGAGATACCTCTAATGGTTAATTTGGAGGCTGACGTACACTCAGAATGGAGGGAGATA

Coding sequence (CDS)

GCAATATCCATGGGACGTGTTTCTTTTTACATAACAATAGAGTCAATTAAAAAAGCCATAAAAAATCTAGATGCAACGATTGTTGGTTTAAATGGAATGTCTTTCGTACTGTTGATTTGGGCATATGAGTGCATACGACTGTTATATTATGAGAAAACCCCATATAGAAAACACATATCTTCTGAGATACCTCTAATGGTTAATTTGGAGGCTGACGTACACTCAGAATGGAGGGAGATA

Protein sequence

AISMGRVSFYITIESIKKAIKNLDATIVGLNGMSFVLLIWAYECIRLLYYEKTPYRKHISSEIPLMVNLEADVHSEWREI
Homology
[Close]
BLAST of MC00g0377 vs. NCBI nr
Match: XP_022132727.1 (uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132728.1 uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132729.1 uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132730.1 uncharacterized protein LOC111005524 [Momordica charantia])

HSP 1 Score: 74.3 bits (181), Expect = 3.03e-13
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 0 

Query: 5   GRVSFYITIESIKKAIKNLDATIVGLNGMSFVLLIWAYECIRLLYYEKTPYRKHISSEIP 64
           GRVS+ ITI+ +KKAIK+ DA+ +G+ G  + LL+WAYE I LL      +   ISS +P
Sbjct: 431 GRVSYEITIDFVKKAIKSNDASAIGIGGFPYALLVWAYETIPLLSLNSNLFATKISSGMP 490

Query: 65  LMVNLEADVHSEWREI 80
            M N  A+VH EWR++
Sbjct: 491 RMNNWVANVHPEWRDL 506

[Close]
BLAST of MC00g0377 vs. NCBI nr
Match: XP_038883720.1 (uncharacterized protein LOC120074618 isoform X6 [Benincasa hispida])

HSP 1 Score: 71.2 bits (173), Expect = 3.74e-12
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0 

Query: 5   GRVSFYITIESIKKAIKNLDATIVGLNGMSFVLLIWAYECIRLLYYEKTPYRKHISSEIP 64
           GR+S+ ITI+ +KKAIK+ DA+ +G+ G +F LL+WAYE I LL          +S   P
Sbjct: 721 GRISYEITIDFVKKAIKSNDASAIGIGGCAFALLVWAYETIPLLGLNSNFVATRVSFGTP 780

Query: 65  LMVNLEADVHSEWREI 80
            M N  ADVH EW+++
Sbjct: 781 RMNNWAADVHPEWKDL 796

[Close]
BLAST of MC00g0377 vs. NCBI nr
Match: XP_038883719.1 (uncharacterized protein LOC120074618 isoform X5 [Benincasa hispida])

HSP 1 Score: 71.2 bits (173), Expect = 3.74e-12
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0 

Query: 5   GRVSFYITIESIKKAIKNLDATIVGLNGMSFVLLIWAYECIRLLYYEKTPYRKHISSEIP 64
           GR+S+ ITI+ +KKAIK+ DA+ +G+ G +F LL+WAYE I LL          +S   P
Sbjct: 749 GRISYEITIDFVKKAIKSNDASAIGIGGCAFALLVWAYETIPLLGLNSNFVATRVSFGTP 808

Query: 65  LMVNLEADVHSEWREI 80
            M N  ADVH EW+++
Sbjct: 809 RMNNWAADVHPEWKDL 824

[Close]
BLAST of MC00g0377 vs. NCBI nr
Match: XP_038883718.1 (uncharacterized protein LOC120074618 isoform X4 [Benincasa hispida])

HSP 1 Score: 71.2 bits (173), Expect = 3.74e-12
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0 

Query: 5   GRVSFYITIESIKKAIKNLDATIVGLNGMSFVLLIWAYECIRLLYYEKTPYRKHISSEIP 64
           GR+S+ ITI+ +KKAIK+ DA+ +G+ G +F LL+WAYE I LL          +S   P
Sbjct: 750 GRISYEITIDFVKKAIKSNDASAIGIGGCAFALLVWAYETIPLLGLNSNFVATRVSFGTP 809

Query: 65  LMVNLEADVHSEWREI 80
            M N  ADVH EW+++
Sbjct: 810 RMNNWAADVHPEWKDL 825

[Close]
BLAST of MC00g0377 vs. NCBI nr
Match: XP_038883717.1 (uncharacterized protein LOC120074618 isoform X3 [Benincasa hispida])

HSP 1 Score: 71.2 bits (173), Expect = 3.74e-12
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0 

Query: 5   GRVSFYITIESIKKAIKNLDATIVGLNGMSFVLLIWAYECIRLLYYEKTPYRKHISSEIP 64
           GR+S+ ITI+ +KKAIK+ DA+ +G+ G +F LL+WAYE I LL          +S   P
Sbjct: 753 GRISYEITIDFVKKAIKSNDASAIGIGGCAFALLVWAYETIPLLGLNSNFVATRVSFGTP 812

Query: 65  LMVNLEADVHSEWREI 80
            M N  ADVH EW+++
Sbjct: 813 RMNNWAADVHPEWKDL 828

[Close]
BLAST of MC00g0377 vs. ExPASy TrEMBL
Match: A0A6J1BX50 (uncharacterized protein LOC111005524 OS=Momordica charantia OX=3673 GN=LOC111005524 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.47e-13
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 0 

Query: 5   GRVSFYITIESIKKAIKNLDATIVGLNGMSFVLLIWAYECIRLLYYEKTPYRKHISSEIP 64
           GRVS+ ITI+ +KKAIK+ DA+ +G+ G  + LL+WAYE I LL      +   ISS +P
Sbjct: 431 GRVSYEITIDFVKKAIKSNDASAIGIGGFPYALLVWAYETIPLLSLNSNLFATKISSGMP 490

Query: 65  LMVNLEADVHSEWREI 80
            M N  A+VH EWR++
Sbjct: 491 RMNNWVANVHPEWRDL 506

[Close]
BLAST of MC00g0377 vs. ExPASy TrEMBL
Match: A0A1S3B181 (uncharacterized protein LOC103484737 isoform X7 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.47e-12
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0 

Query: 5   GRVSFYITIESIKKAIKNLDATIVGLNGMSFVLLIWAYECIRLLYYEKTPYRKHISSEIP 64
           GR+S+ ITI+ +KKAIK+ DA+ +G+ G  F L +WAYE I LL      +   IS   P
Sbjct: 723 GRISYEITIDFVKKAIKSNDASAIGVGGFPFALCVWAYETIPLLALNSNFFAMRISFGTP 782

Query: 65  LMVNLEADVHSEWREI 80
            M N  ADVH EW+++
Sbjct: 783 RMNNWAADVHPEWKDL 798

[Close]
BLAST of MC00g0377 vs. ExPASy TrEMBL
Match: A0A1S3B0K0 (uncharacterized protein LOC103484737 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.47e-12
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0 

Query: 5   GRVSFYITIESIKKAIKNLDATIVGLNGMSFVLLIWAYECIRLLYYEKTPYRKHISSEIP 64
           GR+S+ ITI+ +KKAIK+ DA+ +G+ G  F L +WAYE I LL      +   IS   P
Sbjct: 723 GRISYEITIDFVKKAIKSNDASAIGVGGFPFALCVWAYETIPLLALNSNFFAMRISFGTP 782

Query: 65  LMVNLEADVHSEWREI 80
            M N  ADVH EW+++
Sbjct: 783 RMNNWAADVHPEWKDL 798

[Close]
BLAST of MC00g0377 vs. ExPASy TrEMBL
Match: A0A1S3B0L9 (uncharacterized protein LOC103484737 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.47e-12
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0 

Query: 5   GRVSFYITIESIKKAIKNLDATIVGLNGMSFVLLIWAYECIRLLYYEKTPYRKHISSEIP 64
           GR+S+ ITI+ +KKAIK+ DA+ +G+ G  F L +WAYE I LL      +   IS   P
Sbjct: 725 GRISYEITIDFVKKAIKSNDASAIGVGGFPFALCVWAYETIPLLALNSNFFAMRISFGTP 784

Query: 65  LMVNLEADVHSEWREI 80
            M N  ADVH EW+++
Sbjct: 785 RMNNWAADVHPEWKDL 800

[Close]
BLAST of MC00g0377 vs. ExPASy TrEMBL
Match: A0A1S3B065 (uncharacterized protein LOC103484737 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.47e-12
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0 

Query: 5   GRVSFYITIESIKKAIKNLDATIVGLNGMSFVLLIWAYECIRLLYYEKTPYRKHISSEIP 64
           GR+S+ ITI+ +KKAIK+ DA+ +G+ G  F L +WAYE I LL      +   IS   P
Sbjct: 741 GRISYEITIDFVKKAIKSNDASAIGVGGFPFALCVWAYETIPLLALNSNFFAMRISFGTP 800

Query: 65  LMVNLEADVHSEWREI 80
            M N  ADVH EW+++
Sbjct: 801 RMNNWAADVHPEWKDL 816

The following BLAST results are available for this feature:
BLAST of MC00g0377 vs.
Match NameE-valueIdentityDescription
BLAST of MC00g0377 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022132727.13.03e-1348.68uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132728.1 uncha... [more]
XP_038883720.13.74e-1246.05uncharacterized protein LOC120074618 isoform X6 [Benincasa hispida][more]
XP_038883719.13.74e-1246.05uncharacterized protein LOC120074618 isoform X5 [Benincasa hispida][more]
XP_038883718.13.74e-1246.05uncharacterized protein LOC120074618 isoform X4 [Benincasa hispida][more]
XP_038883717.13.74e-1246.05uncharacterized protein LOC120074618 isoform X3 [Benincasa hispida][more]
BLAST of MC00g0377 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BX501.47e-1348.68uncharacterized protein LOC111005524 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A1S3B1812.47e-1246.05uncharacterized protein LOC103484737 isoform X7 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3B0K02.47e-1246.05uncharacterized protein LOC103484737 isoform X6 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3B0L92.47e-1246.05uncharacterized protein LOC103484737 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3B0652.47e-1246.05uncharacterized protein LOC103484737 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of MC00g0377 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC00g0377.1MC00g0377.1mRNA