MC00g0360 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0360
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein WHAT'S THIS FACTOR 1 homolog
Location	scaffold7: 235481 .. 237236 (+)
RNA-Seq Expression	MC00g0360
Synteny	MC00g0360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCAAGTTGCTTCTTTATTCGCCCAAAGCTTCGCTCTCTGTATCCGTGCCATTCATTCTCCCTCGCAAACCTTATTTTTCTGAGAATCCCTCTTTTTCCCTCAAATCGGAAGAATTTTGGGGTAGAAACTTGGATTTGCGCCACAGAATTGATAGTTCCAGTAGTAATTTAAGGAAATTCCATGTCCCGCTTCAGCCGATTAGAGCTGTTGTGAAGCGGAGGAAAGAGCTTAAGTTCGACAATGTGATACAGAGGGATAAGAAGCTGAAGTTGGTTATGAGGATTAGGAAGATTCTTGTTCAACGACCTGATAGAATTATGTCACTGAAGGAGTTGGGTAAATTCAGGAGAGATTTGGGTCTGGAGAAGAAGAGGAGGCTAATTGCATTGTTGAAGAAGTTCCCTGCTGTGTTTGAGGTTGTGGAAGAAGGGGCGTTTTCGTTGAAATTCAAGTTAACGCCGGAGGCCGAAAGGCTGTATTTGGAGGAGTTGAAGATCAGGAATGAGATGGAAGGATTGTTGGTTGTTAAGCTGAGGAAGCTACTGATGATGTCGATCGATAAACGCATTCTGTTGGAGAAAATCGCACATTTGAGGACCGATTTCGGTCTTCCTTTAGAGTTTCGCGACACGATCTGCCATCGTTATCCTCACTACTTTAGAGTTGTAGCGACCGGGCGTGGTCCGGCCCTCGAATTGACTCACTGGGATCCTGAACTTGCTGTTTCTGCAGCAGAGTTAGCGGAAGAGGAAAACCGAGCTCGAGAGTTAGAAGAGAAGAATTTGATCATCGACCGCCCTTTGAAGTTTAATCGAGTGAAGCTACCAAAGGGGCTTAATCTTTCCAAGGGTGAGATGAGGAAGATTAGTCAGTTTAGGGACATTCCTTACGTCTCTCCCTATTCTGATTTCTCAGAACTAAAGGCAGGTACCCCACAGAAAGAGAAGCATGCTTGTGGGGTTGTTCATGAGATTTTAAGCCTTACACTTGAGAAGAGGACTCTTGTGGATCATCTCACTCATTTCCGGGAGGAGTTTCGGTTCTCTCAGCAGTTGAGAGGGATGCTGATAAGGCATCCCGATATGTTTTATATCTCGTTGAAAGGAGATAGAGATTCAGTTTTCCTTAGGGAAGCGTATCGCGACTCTCAGTTGATAGACAAAGATCGGTTGTTAATCATAAAGGAGAAGCTTCGAGCGCTTGTTGCTGTTCCCCGGTTCCGAGGGAGAGGAGCTACCAAGAGTGACACAGATGGGGAAGAAACTAATCAGCCAGATGATTTGAGTGGTGAAGATTGGTCTGATGTTGATAACCTTTTGGGCGACGATGATGACGACGAGGACGATGGAGATGATACATATGATGATGGCTGGAGTGATGAAGATGATACCCCACCAAGTTTTGATGGAGATGGAGATGGAGAAGCCATAAATATTGTTTCAAGCAAGCAAAAACGGGTCGATAACTTGCAGAAGGTCGGTCAGAGTCTACTTACTCCCGTGTTACCCGATGGACGGTCCCGAGAGCGATGGTGAGAGGCGTAAACCTGTCTACTTTGTAGTATACTCTTAGACATCTGTAGGGAGGACTTGAATTCATGACTGTTTCTCTGTTGTGCAGCAATGGTGGTTCCTTGAATTTATATTATGCTTTTATTTAGTCCTTCGAATCAATGCCATCAACTAGTCCATCTCGACTTTACATTAATTCAATCAAAATTTGATTATATTCATTAAAACACAATTTAGC

mRNA sequence

ATGGATTCCAAGTTGCTTCTTTATTCGCCCAAAGCTTCGCTCTCTGTATCCGTGCCATTCATTCTCCCTCGCAAACCTTATTTTTCTGAGAATCCCTCTTTTTCCCTCAAATCGGAAGAATTTTGGGGTAGAAACTTGGATTTGCGCCACAGAATTGATAGTTCCAGTAGTAATTTAAGGAAATTCCATGTCCCGCTTCAGCCGATTAGAGCTGTTGTGAAGCGGAGGAAAGAGCTTAAGTTCGACAATGTGATACAGAGGGATAAGAAGCTGAAGTTGGTTATGAGGATTAGGAAGATTCTTGTTCAACGACCTGATAGAATTATGTCACTGAAGGAGTTGGGTAAATTCAGGAGAGATTTGGGTCTGGAGAAGAAGAGGAGGCTAATTGCATTGTTGAAGAAGTTCCCTGCTGTGTTTGAGGTTGTGGAAGAAGGGGCGTTTTCGTTGAAATTCAAGTTAACGCCGGAGGCCGAAAGGCTGTATTTGGAGGAGTTGAAGATCAGGAATGAGATGGAAGGATTGTTGGTTGTTAAGCTGAGGAAGCTACTGATGATGTCGATCGATAAACGCATTCTGTTGGAGAAAATCGCACATTTGAGGACCGATTTCGGTCTTCCTTTAGAGTTTCGCGACACGATCTGCCATCGTTATCCTCACTACTTTAGAGTTGTAGCGACCGGGCGTGGTCCGGCCCTCGAATTGACTCACTGGGATCCTGAACTTGCTGTTTCTGCAGCAGAGTTAGCGGAAGAGGAAAACCGAGCTCGAGAGTTAGAAGAGAAGAATTTGATCATCGACCGCCCTTTGAAGTTTAATCGAGTGAAGCTACCAAAGGGGCTTAATCTTTCCAAGGGTGAGATGAGGAAGATTAGTCAGTTTAGGGACATTCCTTACGTCTCTCCCTATTCTGATTTCTCAGAACTAAAGGCAGGTACCCCACAGAAAGAGAAGCATGCTTGTGGGGTTGTTCATGAGATTTTAAGCCTTACACTTGAGAAGAGGACTCTTGTGGATCATCTCACTCATTTCCGGGAGGAGTTTCGGTTCTCTCAGCAGTTGAGAGGGATGCTGATAAGGCATCCCGATATGTTTTATATCTCGTTGAAAGGAGATAGAGATTCAGTTTTCCTTAGGGAAGCGTATCGCGACTCTCAGTTGATAGACAAAGATCGGTTGTTAATCATAAAGGAGAAGCTTCGAGCGCTTGTTGCTGTTCCCCGGTTCCGAGGGAGAGGAGCTACCAAGAGTGACACAGATGGGGAAGAAACTAATCAGCCAGATGATTTGAGTGGTGAAGATTGGTCTGATGTTGATAACCTTTTGGGCGACGATGATGACGACGAGGACGATGGAGATGATACATATGATGATGGCTGGAGTGATGAAGATGATACCCCACCAAGTTTTGATGGAGATGGAGATGGAGAAGCCATAAATATTGTTTCAAGCAAGCAAAAACGGGTCGATAACTTGCAGAAGGTCGGTCAGAGTCTACTTACTCCCGTGTTACCCGATGGACGGTCCCGAGAGCGATGGTGAGAGGCGTAAACCTGTCTACTTTGTAGTATACTCTTAGACATCTGTAGGGAGGACTTGAATTCATGACTGTTTCTCTGTTGTGCAGCAATGGTGGTTCCTTGAATTTATATTATGCTTTTATTTAGTCCTTCGAATCAATGCCATCAACTAGTCCATCTCGACTTTACATTAATTCAATCAAAATTTGATTATATTCATTAAAACACAATTTAGC

Coding sequence (CDS)

ATGGATTCCAAGTTGCTTCTTTATTCGCCCAAAGCTTCGCTCTCTGTATCCGTGCCATTCATTCTCCCTCGCAAACCTTATTTTTCTGAGAATCCCTCTTTTTCCCTCAAATCGGAAGAATTTTGGGGTAGAAACTTGGATTTGCGCCACAGAATTGATAGTTCCAGTAGTAATTTAAGGAAATTCCATGTCCCGCTTCAGCCGATTAGAGCTGTTGTGAAGCGGAGGAAAGAGCTTAAGTTCGACAATGTGATACAGAGGGATAAGAAGCTGAAGTTGGTTATGAGGATTAGGAAGATTCTTGTTCAACGACCTGATAGAATTATGTCACTGAAGGAGTTGGGTAAATTCAGGAGAGATTTGGGTCTGGAGAAGAAGAGGAGGCTAATTGCATTGTTGAAGAAGTTCCCTGCTGTGTTTGAGGTTGTGGAAGAAGGGGCGTTTTCGTTGAAATTCAAGTTAACGCCGGAGGCCGAAAGGCTGTATTTGGAGGAGTTGAAGATCAGGAATGAGATGGAAGGATTGTTGGTTGTTAAGCTGAGGAAGCTACTGATGATGTCGATCGATAAACGCATTCTGTTGGAGAAAATCGCACATTTGAGGACCGATTTCGGTCTTCCTTTAGAGTTTCGCGACACGATCTGCCATCGTTATCCTCACTACTTTAGAGTTGTAGCGACCGGGCGTGGTCCGGCCCTCGAATTGACTCACTGGGATCCTGAACTTGCTGTTTCTGCAGCAGAGTTAGCGGAAGAGGAAAACCGAGCTCGAGAGTTAGAAGAGAAGAATTTGATCATCGACCGCCCTTTGAAGTTTAATCGAGTGAAGCTACCAAAGGGGCTTAATCTTTCCAAGGGTGAGATGAGGAAGATTAGTCAGTTTAGGGACATTCCTTACGTCTCTCCCTATTCTGATTTCTCAGAACTAAAGGCAGGTACCCCACAGAAAGAGAAGCATGCTTGTGGGGTTGTTCATGAGATTTTAAGCCTTACACTTGAGAAGAGGACTCTTGTGGATCATCTCACTCATTTCCGGGAGGAGTTTCGGTTCTCTCAGCAGTTGAGAGGGATGCTGATAAGGCATCCCGATATGTTTTATATCTCGTTGAAAGGAGATAGAGATTCAGTTTTCCTTAGGGAAGCGTATCGCGACTCTCAGTTGATAGACAAAGATCGGTTGTTAATCATAAAGGAGAAGCTTCGAGCGCTTGTTGCTGTTCCCCGGTTCCGAGGGAGAGGAGCTACCAAGAGTGACACAGATGGGGAAGAAACTAATCAGCCAGATGATTTGAGTGGTGAAGATTGGTCTGATGTTGATAACCTTTTGGGCGACGATGATGACGACGAGGACGATGGAGATGATACATATGATGATGGCTGGAGTGATGAAGATGATACCCCACCAAGTTTTGATGGAGATGGAGATGGAGAAGCCATAAATATTGTTTCAAGCAAGCAAAAACGGGTCGATAACTTGCAGAAGGTCGGTCAGAGTCTACTTACTCCCGTGTTACCCGATGGACGGTCCCGAGAGCGATGGTGA

Protein sequence

MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLRKFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKLRKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYVSPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTDGEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSDEDDTPPSFDGDGDGEAINIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW

Homology

[Close]

BLAST of MC00g0360 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 6.5e-173
Identity = 335/532 (62.97%), Postives = 408/532 (76.69%), Query Frame = 0


Query: 10  PKASLSVSVPFILPRKPYFSENPSFSLKS-----------EEFWGRNLDLRHRIDSSSSN 69
           PK  LS   P  +     F+E    S+KS            +F G  L L ++    S++
Sbjct: 3   PKLLLSAHKPLFVSCNSPFNEKTKLSVKSGLPMSTIRAARSQFMGEGLILGNKYGFWSTS 62

Query: 70  LRKFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFR 129
            RK  V ++P+RA VKRRKEL FD+V+QRDKKLKLV+ IRKILV +PDR+MSL+ LGK+R
Sbjct: 63  -RKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYR 122

Query: 130 RDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVV 189
           RDLGL+K+RR IALL+K+P VFE+VEEGA+SL+FK+T EAERLYL+E++IRNE+E +LVV
Sbjct: 123 RDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVV 182

Query: 190 KLRKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHW 249
           KLRKL+MMSIDKRILLEKI+HL+TD GLPLEFRDTIC RYP YFRVV T RGPALELTHW
Sbjct: 183 KLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHW 242

Query: 250 DPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIP 309
           DPELAVSAAEL+E++NR RE EE+NLIIDRP KFNRVKLP+GLNLSK E RKISQFRD+ 
Sbjct: 243 DPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQ 302

Query: 310 YVSPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGML 369
           Y+SPY DFS L++GT +KEKHACGV+HE+LSLT EKRTLVDHLTHFREEFRFSQQLRGML
Sbjct: 303 YISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGML 362

Query: 370 IRHPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATK-- 429
           IRHPD+FY+SLKG+RDSVFLREAYR+S+LIDKD L ++KEK+RALV+VPRF  RG  +  
Sbjct: 363 IRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKD 422

Query: 430 ----------SDTDGEETNQPDDLSGEDWSDVDNLL-GDDDDDEDDGDDTYDDGWSDEDD 489
                     SD DGEE  +  D   E+WSDVD  L G+D  ++DDGD T D+G   E+D
Sbjct: 423 EEGREVEIDGSDADGEEEEEESD--AEEWSDVDGYLEGEDGGNDDDGDWTDDEG---EED 482

Query: 490 TPPSFDGDGDGEAINIV----SSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 514
            PP+FD D + E  + V    S   ++  + +K  + +LTPV PDG  RE+W
Sbjct: 483 VPPNFDDDDEDEEEDSVKIGLSPSSRKSSSPRKKEEKVLTPVFPDGTPREKW 528

[Close]

BLAST of MC00g0360 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 4.8e-160
Identity = 300/455 (65.93%), Postives = 362/455 (79.56%), Query Frame = 0


Query: 70  RAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRDLGLEKKRRL 129
           +A VKRRKE+ FDNVIQRDKKLKLV+++R ILV  PDR+MSL++LG+FRRDLGL +KRRL
Sbjct: 58  QAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRL 117

Query: 130 IALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKLRKLLMMSID 189
           IALLK+FP VFEVVEEG +SL+F+LTP AERLYL+EL ++NE EGL V KLRKLLMMS D
Sbjct: 118 IALLKRFPGVFEVVEEGVYSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQD 177

Query: 190 KRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDPELAVSAAEL 249
           KRIL+EKIAHL+ D GLP EFRDTIC RYP YFRVV   RGP LELTHWDPELAVSAAE+
Sbjct: 178 KRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSAAEV 237

Query: 250 AEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYVSPYSDFSEL 309
           AEEENRARE +E+NLIIDRPLKFNRVKLP+GL LS+GE R+++QF+++PY+SPYSDFS L
Sbjct: 238 AEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHL 297

Query: 310 KAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYISL 369
           ++G+ +KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQ LRGMLIRHPDMFY+SL
Sbjct: 298 RSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSL 357

Query: 370 KGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTDGEETN---- 429
           KGDRDSVFLREAY++SQL++K +L+++KEK+RALVAVPRF  RG   +  + + TN    
Sbjct: 358 KGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATSEEADRTNGAAQ 417

Query: 430 ------QPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGW-SDEDDTPPSFDGDGDGEA 489
                   +D   E  SD+++L+ +    + D D  + DGW  + DD+PP F+ D DG +
Sbjct: 418 MLSEGSDVEDDEDEGLSDMEDLISEISGGKSDTDYHWGDGWVGENDDSPPDFE-DDDGSS 477

Query: 490 INIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 514
           +  V    K+  N          PV PDGR RERW
Sbjct: 478 LKEVKVTMKKTAN--SANGKAHVPVFPDGRPRERW 509

[Close]

BLAST of MC00g0360 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 1.2e-155
Identity = 295/456 (64.69%), Postives = 358/456 (78.51%), Query Frame = 0


Query: 70  RAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRDLGLEKKRRL 129
           +A VKRRKE  FD VIQRDKKLKLV+++R ILV +PDR+MSL+ELG+FRRDLGL +KRRL
Sbjct: 52  QAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRL 111

Query: 130 IALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKLRKLLMMSID 189
           IALL++FP VF+VVEEG +SL+F+LTP AERLYL+EL++RNE EGL V KLRKLLMMS +
Sbjct: 112 IALLRRFPGVFDVVEEGVYSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQE 171

Query: 190 KRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDPELAVSAAEL 249
           KRIL+EK+AHL+ D GLP EFRDT+C RYP YFRVV   RGPALELTHWDPELAVSAAEL
Sbjct: 172 KRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSAAEL 231

Query: 250 AEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYVSPYSDFSEL 309
           AEEE+RARE EE+NLIIDRPLKFNRV+LPKGL L++GE R+I++F+++PY+SPY+DFS L
Sbjct: 232 AEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSHL 291

Query: 310 KAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYISL 369
           ++G+ +KEKHACGVVHEILSLT+EKRTLVDHLTHFREEFRFSQ LRGM+IRHPDMFY+S 
Sbjct: 292 RSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVSF 351

Query: 370 KGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTDGEETN---- 429
           KGDRDSVFLREAY+DSQL++K++L+++KEK+RALVAVPRF  R A  +  + E  N    
Sbjct: 352 KGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGTGEEAEGMNGSLQ 411

Query: 430 QPDDLSGEDWSDVDNLLGDDDD-------DEDDGDDTYDDGW-SDEDDTPPSFDGDGDGE 489
             D +S E++ D D  L D +D        + D D  + DGW  + DD+PP F  D    
Sbjct: 412 SRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDADYEWGDGWFGENDDSPPDFGDDEVKV 471

Query: 490 AINIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 514
           A+ I                S   PV PDGR RERW
Sbjct: 472 AMKIADG---------SANGSAPVPVFPDGRPRERW 498

[Close]

BLAST of MC00g0360 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.8e-35
Identity = 120/380 (31.58%), Postives = 206/380 (54.21%), Query Frame = 0


Query: 75  RRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRDLGLE-KKRRLIALL 134
           R ++  +DN ++ +KK++ V++   +++ +P+  +++  L    R LGL  K+    A L
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFL 105

Query: 135 KKFPAVFEVVEEGAFSLKF-KLTPEAERLYLEELKIRNEMEGLL------VVKLRKLLMM 194
            KFP VFE+ E     + + +LT +A    L++  IR+E E +L      V +LRKL+MM
Sbjct: 106 LKFPHVFEIYEHPVQRILYCRLTRKA----LDQ--IRHEHEAVLDQIPDAVTRLRKLVMM 165

Query: 195 SIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVV--ATGRGPALELTHWDPELAV 254
           S   RI LE +   RT+FGLP +F  ++  ++P +FR++     R   +E+   DP L++
Sbjct: 166 SNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSI 225

Query: 255 SAAELAEEENRARELEEKNLIID-RPLKFN-RVKLPKGLNLSKGEMRKISQFRDIPYVSP 314
            A E      R RE+E +   ID   ++F+  V  P G  + K     + +++ +PY SP
Sbjct: 226 CAIE------RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSP 285

Query: 315 YSDFS--ELKAGTPQK--EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGML 374
           Y D S  +L++   Q   EK +   +HE+LSLT+EK+  ++ + HFR      ++L+  L
Sbjct: 286 YEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFL 345

Query: 375 IRHPDMFYISLKGD---RDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAV-PRFRGRGA 434
           ++H  +FYIS +G+     +VFLRE Y+  +L++ + + + + +L  LV + PR      
Sbjct: 346 LQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPR------ 405

[Close]

BLAST of MC00g0360 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-23
Identity = 99/361 (27.42%), Postives = 169/361 (46.81%), Query Frame = 0


Query: 46  LDLRHRIDSSSSNLRKFHVPLQPIRAVVKRRKELKFDNV--IQRDKKLKLVMRIRKILVQ 105
           L +R    + +S+          +   +K +++  FDN+  I R  +LK V+ ++  +VQ
Sbjct: 2   LSIRRHAKTVASSCTNLTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQ 61

Query: 106 RPDRIMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLK-FKLTPEAERLY 165
            P+R + +  + K  R   +  K  +   L+KFP++FE      ++L  F+LTPEA  L 
Sbjct: 62  EPNRCIPISAISKKTRQFDVSTK--IAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELD 121

Query: 166 LEELKIRNEMEGLLVVKLRKLLMMSIDKRILLEKIAHLRTDFGLP---LEFRDTICHRYP 225
            +E  +       L  +L+KL++MS D  + L  +  ++   GLP   L+F D       
Sbjct: 122 RQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSF 181

Query: 226 HYFRVVATGRGPALELTHWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLP- 285
            +  +    +G A++    D  L+V      ++      LEE    I+ PL       P 
Sbjct: 182 RFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEE----IEFPL------FPS 241

Query: 286 KGLNLSKGEMRKISQFRDIPYVSPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLV 345
           KG  L       + +F+ +PYVSPY D+S L   +   EK   G +HE+L L +E     
Sbjct: 242 KGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAER 301

Query: 346 DHLTHFREEFRFSQQLRGMLIRHPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKE 400
             L   ++ F   Q++     RHP +FY+S+K    +  LRE YRD   ++   +L +++
Sbjct: 302 KKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRK 350

[Close]

BLAST of MC00g0360 vs. NCBI nr
Match: XP_022156569.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 988 bits (2553), Expect = 0.0
Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60
           MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR
Sbjct: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60

Query: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120
           KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD
Sbjct: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180

Query: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240
           RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP
Sbjct: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300
           ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300

Query: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420
           HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD
Sbjct: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420

Query: 421 GEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSDEDDTPPSFDGDGDGEAIN 480
           GEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSDEDDTPPSFDGDGDGEAIN
Sbjct: 421 GEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSDEDDTPPSFDGDGDGEAIN 480

Query: 481 IVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513
           IVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW
Sbjct: 481 IVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513

[Close]

BLAST of MC00g0360 vs. NCBI nr
Match: XP_038900012.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 838 bits (2166), Expect = 1.05e-303
Identity = 447/514 (86.96%), Postives = 472/514 (91.83%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60
           M SKLLLY PK SLS+SVPFIL  K Y S      +KSE FWG+NL+ R+R DS    LR
Sbjct: 1   MGSKLLLYCPKPSLSISVPFILGHKSYCS------VKSE-FWGKNLEFRNRNDS----LR 60

Query: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120
           K HVP QPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQ+PDR+MSLKELGKFRRD
Sbjct: 61  KPHVPFQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLT EAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180

Query: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFRDTICHRYP YFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300
           ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPY+
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300

Query: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFS +KAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420
           HPDMFY+SLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLR+LVAVPRF+GRGA KSD D
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRSLVAVPRFQGRGAPKSDMD 420

Query: 421 GEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDD-TYDDGWSDEDDTPPSFDGDGDGEAI 480
           GE+T+QPDD+SGE+WSDVDN+  DDDD+ DDGDD  ++D W DEDDTPPSFDGD DGE+I
Sbjct: 421 GEDTDQPDDMSGEEWSDVDNVWDDDDDEFDDGDDGAFEDDWIDEDDTPPSFDGDRDGESI 480

Query: 481 NIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513
           N  S KQK+V+NLQKVGQSLL+PVLPDGR RERW
Sbjct: 481 NSGSRKQKQVNNLQKVGQSLLSPVLPDGRPRERW 503

[Close]

BLAST of MC00g0360 vs. NCBI nr
Match: XP_008461525.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 835 bits (2156), Expect = 4.22e-302
Identity = 444/519 (85.55%), Postives = 473/519 (91.14%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60
           MDSKLLLYSPKASLS+SVPFIL  K Y+S      +KS+ FWG+NLDLR+R D    NLR
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYS------VKSQ-FWGKNLDLRNRND----NLR 60

Query: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120
           K H P QPIRAVVKRRKEL FDNVIQRDKKLKLVMRIRKILVQ+PDR+MSLKELGKFRRD
Sbjct: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLT EAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180

Query: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFRDTICHRYP YFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300
           ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPY+
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300

Query: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFS +KAGTPQKEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420
           HPDMFY+SLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFR RGA+  DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420

Query: 421 GEETNQPDDLSGEDWSDVDNLLGDDDDD------EDDGDDTYDDGWSDEDDTPPSFDGDG 480
           G +TNQP D+SGE+WSDVDNLL DDDD+      +DD ++ ++D WSDEDDTPPSF+GD 
Sbjct: 421 GGDTNQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQ 480

Query: 481 DGEAINIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513
           DGE+INI S KQK+V++LQKVGQS L+PVLPDGR RERW
Sbjct: 481 DGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 508

[Close]

BLAST of MC00g0360 vs. NCBI nr
Match: KAA0051010.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK04397.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 832 bits (2149), Expect = 5.49e-301
Identity = 446/522 (85.44%), Postives = 473/522 (90.61%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60
           MDSKLLLYSPKASLS+SVPFIL  K Y+S      +KS+ FWG+NLDLR+R D    NLR
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYS------VKSQ-FWGKNLDLRNRND----NLR 60

Query: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120
           K H P QPIRAVVKRRKEL FDNVIQRDKKLKLVMRIRKILVQ+PDR+MSLKELGKFRRD
Sbjct: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLT EAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180

Query: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFRDTICHRYP YFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300
           ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPY+
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300

Query: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFS +KAGTPQKEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420
           HPDMFY+SLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFR RGA+  DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420

Query: 421 GEETNQPDDLSGEDWSDVDNLLGDD-------DDDE--DDGDDTYDDGWSDEDDTPPSFD 480
           G +TNQP D+SGE+WSDVDNLL DD       DDDE  DD ++ ++D WSDEDDTPPSF+
Sbjct: 421 GGDTNQPSDMSGEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFN 480

Query: 481 GDGDGEAINIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513
           GD DGE+INI S KQK+V++LQKVGQS L+PVLPDGR RERW
Sbjct: 481 GDQDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511

[Close]

BLAST of MC00g0360 vs. NCBI nr
Match: XP_022960372.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])

HSP 1 Score: 819 bits (2116), Expect = 6.25e-296
Identity = 432/515 (83.88%), Postives = 472/515 (91.65%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDS-SSSNL 60
           MDS +L YSPKASLS+S+PF+LP + YF ENPS S+KSE FWG+NLDLRHR D  S S+L
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSE-FWGKNLDLRHRNDGFSGSDL 60

Query: 61  RKFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRR 120
           RK  VP QPIRA+VKRRKEL FDNVIQRDKKLKLVMRIRKILVQ PDR+MSLKELGKFRR
Sbjct: 61  RKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRR 120

Query: 121 DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVK 180
           DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLT EAERLYLEELKIRNEMEGLLV+K
Sbjct: 121 DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMK 180

Query: 181 LRKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWD 240
           LRKLLMMS+DKRILLEKIAHLRTDFGLPLEFR+TICH YP YFRVVATGRGPALELTHWD
Sbjct: 181 LRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWD 240

Query: 241 PELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPY 300
           PELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SK EMR+I QFRDIPY
Sbjct: 241 PELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPY 300

Query: 301 VSPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI 360
           +SPYSDFS LKAGTP+KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI
Sbjct: 301 ISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI 360

Query: 361 RHPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDT 420
           RHPDMFY+SLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR RGRGA K+DT
Sbjct: 361 RHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDT 420

Query: 421 DGEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSDE-DDTPPSFDGDGDGEA 480
           DG + +QPD +SG++ SD+DNLL DDD+ +D+ D  ++D WSDE DDTPPSF+GD DGE+
Sbjct: 421 DGGD-DQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGES 480

Query: 481 INIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513
           INI + KQ++VDN QK+ QSLL+PVLPDGR RERW
Sbjct: 481 INIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of MC00g0360 vs. ExPASy TrEMBL
Match: A0A6J1DTV5 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111023444 PE=4 SV=1)

HSP 1 Score: 988 bits (2553), Expect = 0.0
Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60
           MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR
Sbjct: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60

Query: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120
           KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD
Sbjct: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180

Query: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240
           RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP
Sbjct: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300
           ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300

Query: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420
           HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD
Sbjct: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420

Query: 421 GEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSDEDDTPPSFDGDGDGEAIN 480
           GEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSDEDDTPPSFDGDGDGEAIN
Sbjct: 421 GEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSDEDDTPPSFDGDGDGEAIN 480

Query: 481 IVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513
           IVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW
Sbjct: 481 IVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513

[Close]

BLAST of MC00g0360 vs. ExPASy TrEMBL
Match: A0A1S3CG79 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103500096 PE=4 SV=1)

HSP 1 Score: 835 bits (2156), Expect = 2.04e-302
Identity = 444/519 (85.55%), Postives = 473/519 (91.14%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60
           MDSKLLLYSPKASLS+SVPFIL  K Y+S      +KS+ FWG+NLDLR+R D    NLR
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYS------VKSQ-FWGKNLDLRNRND----NLR 60

Query: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120
           K H P QPIRAVVKRRKEL FDNVIQRDKKLKLVMRIRKILVQ+PDR+MSLKELGKFRRD
Sbjct: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLT EAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180

Query: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFRDTICHRYP YFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300
           ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPY+
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300

Query: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFS +KAGTPQKEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420
           HPDMFY+SLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFR RGA+  DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420

Query: 421 GEETNQPDDLSGEDWSDVDNLLGDDDDD------EDDGDDTYDDGWSDEDDTPPSFDGDG 480
           G +TNQP D+SGE+WSDVDNLL DDDD+      +DD ++ ++D WSDEDDTPPSF+GD 
Sbjct: 421 GGDTNQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQ 480

Query: 481 DGEAINIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513
           DGE+INI S KQK+V++LQKVGQS L+PVLPDGR RERW
Sbjct: 481 DGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 508

[Close]

BLAST of MC00g0360 vs. ExPASy TrEMBL
Match: A0A5D3BY23 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00850 PE=4 SV=1)

HSP 1 Score: 832 bits (2149), Expect = 2.66e-301
Identity = 446/522 (85.44%), Postives = 473/522 (90.61%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60
           MDSKLLLYSPKASLS+SVPFIL  K Y+S      +KS+ FWG+NLDLR+R D    NLR
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYS------VKSQ-FWGKNLDLRNRND----NLR 60

Query: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120
           K H P QPIRAVVKRRKEL FDNVIQRDKKLKLVMRIRKILVQ+PDR+MSLKELGKFRRD
Sbjct: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLT EAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180

Query: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFRDTICHRYP YFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300
           ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPY+
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300

Query: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFS +KAGTPQKEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420
           HPDMFY+SLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFR RGA+  DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420

Query: 421 GEETNQPDDLSGEDWSDVDNLLGDD-------DDDE--DDGDDTYDDGWSDEDDTPPSFD 480
           G +TNQP D+SGE+WSDVDNLL DD       DDDE  DD ++ ++D WSDEDDTPPSF+
Sbjct: 421 GGDTNQPSDMSGEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFN 480

Query: 481 GDGDGEAINIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513
           GD DGE+INI S KQK+V++LQKVGQS L+PVLPDGR RERW
Sbjct: 481 GDQDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511

[Close]

BLAST of MC00g0360 vs. ExPASy TrEMBL
Match: A0A6J1H780 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461117 PE=4 SV=1)

HSP 1 Score: 819 bits (2116), Expect = 3.03e-296
Identity = 432/515 (83.88%), Postives = 472/515 (91.65%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDS-SSSNL 60
           MDS +L YSPKASLS+S+PF+LP + YF ENPS S+KSE FWG+NLDLRHR D  S S+L
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSE-FWGKNLDLRHRNDGFSGSDL 60

Query: 61  RKFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRR 120
           RK  VP QPIRA+VKRRKEL FDNVIQRDKKLKLVMRIRKILVQ PDR+MSLKELGKFRR
Sbjct: 61  RKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRR 120

Query: 121 DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVK 180
           DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLT EAERLYLEELKIRNEMEGLLV+K
Sbjct: 121 DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMK 180

Query: 181 LRKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWD 240
           LRKLLMMS+DKRILLEKIAHLRTDFGLPLEFR+TICH YP YFRVVATGRGPALELTHWD
Sbjct: 181 LRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWD 240

Query: 241 PELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPY 300
           PELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SK EMR+I QFRDIPY
Sbjct: 241 PELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPY 300

Query: 301 VSPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI 360
           +SPYSDFS LKAGTP+KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI
Sbjct: 301 ISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI 360

Query: 361 RHPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDT 420
           RHPDMFY+SLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR RGRGA K+DT
Sbjct: 361 RHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDT 420

Query: 421 DGEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSDE-DDTPPSFDGDGDGEA 480
           DG + +QPD +SG++ SD+DNLL DDD+ +D+ D  ++D WSDE DDTPPSF+GD DGE+
Sbjct: 421 DGGD-DQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEEDDTPPSFNGDRDGES 480

Query: 481 INIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513
           INI + KQ++VDN QK+ QSLL+PVLPDGR RERW
Sbjct: 481 INIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of MC00g0360 vs. ExPASy TrEMBL
Match: A0A6J1KW65 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498122 PE=4 SV=1)

HSP 1 Score: 808 bits (2088), Expect = 5.54e-292
Identity = 429/515 (83.30%), Postives = 467/515 (90.68%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDS-SSSNL 60
           MDS +L YSPKASLS+S+PF+LP + YF ENPS S+KSE FWG+NLDLRHR D  S S+L
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRAYFFENPSSSVKSE-FWGKNLDLRHRNDGFSGSDL 60

Query: 61  RKFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRR 120
           RK  VP QPI A+VKRRKEL FDNVIQRDKKLKLVMRIRKILVQ PDR+MSLKELGKFRR
Sbjct: 61  RKSRVPFQPITAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRR 120

Query: 121 DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVK 180
           DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLT EAE LYLEELKIRNEMEGLLV+K
Sbjct: 121 DLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAESLYLEELKIRNEMEGLLVMK 180

Query: 181 LRKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWD 240
           LRKLLMMS+DKRILLEKIAHLRTDFGLPLEFR+TICH YP YFRVVATGRGPALELTHWD
Sbjct: 181 LRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWD 240

Query: 241 PELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPY 300
           PELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SK EMR+I QFRDIPY
Sbjct: 241 PELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPY 300

Query: 301 VSPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI 360
           +SPYSDFS LKAGTP+KEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI
Sbjct: 301 ISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLI 360

Query: 361 RHPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDT 420
           RHPDMFY+SLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR RGRGA K+DT
Sbjct: 361 RHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDT 420

Query: 421 DGEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSDE-DDTPPSFDGDGDGEA 480
           DG + +QPD +SGE+ SD+DNLL D D+ +D+ D  ++D WSDE DDTPPSF+ D DGE+
Sbjct: 421 DGGD-DQPDYMSGEESSDIDNLLDDGDEFDDNEDGAFEDNWSDEEDDTPPSFNVDRDGES 480

Query: 481 INIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513
           INI + KQ +VDN QK+ QSLL+PVLPDGR RERW
Sbjct: 481 INIEARKQSQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of MC00g0360 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 608.6 bits (1568), Expect = 4.6e-174
Identity = 335/532 (62.97%), Postives = 408/532 (76.69%), Query Frame = 0


Query: 10  PKASLSVSVPFILPRKPYFSENPSFSLKS-----------EEFWGRNLDLRHRIDSSSSN 69
           PK  LS   P  +     F+E    S+KS            +F G  L L ++    S++
Sbjct: 3   PKLLLSAHKPLFVSCNSPFNEKTKLSVKSGLPMSTIRAARSQFMGEGLILGNKYGFWSTS 62

Query: 70  LRKFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFR 129
            RK  V ++P+RA VKRRKEL FD+V+QRDKKLKLV+ IRKILV +PDR+MSL+ LGK+R
Sbjct: 63  -RKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYR 122

Query: 130 RDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVV 189
           RDLGL+K+RR IALL+K+P VFE+VEEGA+SL+FK+T EAERLYL+E++IRNE+E +LVV
Sbjct: 123 RDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVV 182

Query: 190 KLRKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHW 249
           KLRKL+MMSIDKRILLEKI+HL+TD GLPLEFRDTIC RYP YFRVV T RGPALELTHW
Sbjct: 183 KLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHW 242

Query: 250 DPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIP 309
           DPELAVSAAEL+E++NR RE EE+NLIIDRP KFNRVKLP+GLNLSK E RKISQFRD+ 
Sbjct: 243 DPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQ 302

Query: 310 YVSPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGML 369
           Y+SPY DFS L++GT +KEKHACGV+HE+LSLT EKRTLVDHLTHFREEFRFSQQLRGML
Sbjct: 303 YISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGML 362

Query: 370 IRHPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATK-- 429
           IRHPD+FY+SLKG+RDSVFLREAYR+S+LIDKD L ++KEK+RALV+VPRF  RG  +  
Sbjct: 363 IRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKD 422

Query: 430 ----------SDTDGEETNQPDDLSGEDWSDVDNLL-GDDDDDEDDGDDTYDDGWSDEDD 489
                     SD DGEE  +  D   E+WSDVD  L G+D  ++DDGD T D+G   E+D
Sbjct: 423 EEGREVEIDGSDADGEEEEEESD--AEEWSDVDGYLEGEDGGNDDDGDWTDDEG---EED 482

Query: 490 TPPSFDGDGDGEAINIV----SSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 514
            PP+FD D + E  + V    S   ++  + +K  + +LTPV PDG  RE+W
Sbjct: 483 VPPNFDDDDEDEEEDSVKIGLSPSSRKSSSPRKKEEKVLTPVFPDGTPREKW 528

[Close]

BLAST of MC00g0360 vs. TAIR 10
Match: AT5G62990.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 224.9 bits (572), Expect = 1.4e-58
Identity = 153/423 (36.17%), Postives = 242/423 (57.21%), Query Frame = 0


Query: 82  DNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFE 141
           D  + +  +++ V ++  +L+ +P   + ++ L K R  L +E    ++++++++P +FE
Sbjct: 66  DRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFE 125

Query: 142 V-----------VEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKLRKLLMMSIDK 201
           +             +    L  +LT  A  L ++EL +++E+   L  KL+KLLM+S  +
Sbjct: 126 LFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSHR 185

Query: 202 RILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDPELAVSAAELA 261
           R+LL K+ H+  DFG P  FR  +C+ YP  F+ V T  G ALEL   DPELA       
Sbjct: 186 RLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPELA------- 245

Query: 262 EEENRARELE-EKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYVSPYSDFSE- 321
              N+    E ++ LI+DRPLKF R+ L +GLNL +     + +FR+ P V PY   S+ 
Sbjct: 246 ---NQMPSPEVDRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDY 305

Query: 322 LKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYIS 381
           L + + + EK AC VV E+L LT+EKRTL+DHLTHFR+EF    +LR +++RHP++FY+S
Sbjct: 306 LASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVS 365

Query: 382 LKGDRDSVFLREAYRDS-QLIDKDRLLIIKEKLRALVAVPR-----FRGRGATKSDTDGE 441
           +KG RDSVFL EAY D+  L+DKD  L+I+E+L  L+   +      R +GAT  D   E
Sbjct: 366 IKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLGDKSVE 425

Query: 442 ETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDDTYDDGWSDEDDTPPSFDGDGDGEAINIV 486
           E  + D+   +  SD+D+   D  ++  D +D   +   DE+D     +   +GE++   
Sbjct: 426 EKRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDD--EAGVNGESVEYW 476

[Close]

BLAST of MC00g0360 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 186.0 bits (471), Expect = 7.4e-47
Identity = 137/373 (36.73%), Postives = 210/373 (56.30%), Query Frame = 0


Query: 44  RNLDLRHRIDSSSSNLRKFHVPLQPIRAV----VKRRKELKFDNVIQRDKKLKLVMRIRK 103
           RNL + + I  S  + ++  + +Q IR +    V  +K+ + D  I++DK+ KL  R+ K
Sbjct: 4   RNLTISYEIIKSLKHAKEHSLGIQ-IRWISSLKVVWKKDTRLDEAIEQDKRYKLCARVVK 63

Query: 104 ILVQRPDRIMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEV----VEEGAFSLKF-KL 163
            ++  P +++ L+ L K R  L L  K +  + ++  P++FE+    ++  +  ++F + 
Sbjct: 64  EVLNEPGQVIPLRYLEKRRERLRLTFKAK--SFVEMNPSLFEIYYDRIKPKSDPVQFLRP 123

Query: 164 TPEAERLYLEELKIRNEMEGLLVVKLRKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTI 223
           TP       EE +I +E E LLV KL +LLMM+ DK I  +K+ H++ DFG P +F   +
Sbjct: 124 TPRLRAFLDEEQRIYSENEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKL 183

Query: 224 CHRYPHYFRVVATGR--GPALELTHWDPELAVSAAELAEEENRARELEEKNLIIDRPLKF 283
             +YP+YFR+          LEL  W+P+ A S  EL     RA +   K  +  RP  +
Sbjct: 184 VQKYPNYFRLTGLPEEGKSFLELVSWNPDFAKSKIEL-----RAEDETLKTGVRIRP-NY 243

Query: 284 NRVKLPKGLNLSKGEMRKISQ-FRDIPYVSPYSDFSELKAGTPQKEKHACGVVHEILSLT 343
           N VKLP G  L K EMR+ ++ + +  Y+SPY D S L   + + EK   GVVHE+LSL+
Sbjct: 244 N-VKLPSGFFLRK-EMREWTRDWLEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLS 303

Query: 344 LEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYISLKGDRDSVFLREAYRDSQLIDKD 403
           L KR  V  L  F +EFRFS     +  RH  +FY+SLKG   +  LREAY+D +L+D+D
Sbjct: 304 LLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRD 363

Query: 404 RLLIIKEKLRALV 405
            LL IK+K   L+
Sbjct: 364 PLLAIKDKFLRLL 365

[Close]

BLAST of MC00g0360 vs. TAIR 10
Match: AT4G08940.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 177.6 bits (449), Expect = 2.6e-44
Identity = 118/323 (36.53%), Postives = 179/323 (55.42%), Query Frame = 0


Query: 82  DNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFE 141
           ++++ RD   + ++R ++ + ++P+RI+ L + GK  R+LG  + R++   + K P +F+
Sbjct: 72  ESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRKVTKFIPKHPLIFQ 131

Query: 142 VVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKLRKLLMMSIDKRILLEKIAHLR 201
                   +    T   E L  EE  +   ME   V  +RKLLMM+ DKRILL KI H R
Sbjct: 132 TYRHSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTKDKRILLSKIHHTR 191

Query: 202 TDFGLPLEFRDTICHRYPHYFRVVATGRG-PALELTHWDPELAVSAAE--LAEEENRARE 261
             FG+P +FRD +  +YP YFRVV  G G   LEL +WD  LAVS  E     +E++A+ 
Sbjct: 192 LLFGIPEDFRDRVA-KYPDYFRVVTGGDGNRVLELVNWDTNLAVSELERLFMIDEDKAK- 251

Query: 262 LEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYVSPYSDFSELKAGTPQKEK 321
                    R  KF  VK  K L L + + RK++     P VSPYSD  +L   + + EK
Sbjct: 252 ---------RVFKF-PVKHGKELELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEAEK 311

Query: 322 HACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYISLKGDRDSVFL 381
           +  G+VHE L+LTLEKR  + H+  F++EF  ++Q   ML +    FY++      +VFL
Sbjct: 312 YRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTVFL 371

Query: 382 REAY-RDSQLIDKDRLLIIKEKL 401
           ++AY  +  L+ KD  ++  EKL
Sbjct: 372 KDAYDENGVLVSKDPQVVFNEKL 382

[Close]

BLAST of MC00g0360 vs. TAIR 10
Match: AT5G21970.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 171.0 bits (432), Expect = 2.5e-42
Identity = 143/411 (34.79%), Postives = 215/411 (52.31%), Query Frame = 0


Query: 70  RAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRDLGLEKKRRL 129
           R+  KR +EL+     ++ K    V+ + ++L    D IM+++   ++RR + L K  ++
Sbjct: 52  RSREKRVQELEI--ATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPHKI 111

Query: 130 IALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKLRKLLMMSID 189
              ++K P +FE+ ++    L   LT   E L  E  K+  E        + + LMMS+D
Sbjct: 112 SDFIRKSPKLFELYKDQRGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSVD 171

Query: 190 KRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPA-LELTHWDPELAVSAAE 249
           K++ L+KI H R DFGLPL+FR    + +P +F+VV  G G   LEL  W+P  A++   
Sbjct: 172 KKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEEYLELVSWNPAWAIT--- 231

Query: 250 LAEEENRARELEEKNLIIDRPLKFN--------RVKLPKGLNLSKGEMRKISQFRDIPYV 309
                    ELE+K L I    +           +K P           KI  F+   Y+
Sbjct: 232 ---------ELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMYRYRGKIEHFQKRSYL 291

Query: 310 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 369
           SPY+D   L+AG+ + +K A  V+HE+LS TLEKR + DHLTHFR EF   Q+L  + ++
Sbjct: 292 SPYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLK 351

Query: 370 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRG---ATKS 429
           H  +FY+S +G R SVFL E Y   +LI+K  L++ KEKL        +RGR     T S
Sbjct: 352 HCGIFYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEKLLKFTG---YRGRKRDIQTYS 411

Query: 430 DT-DGEETNQPDDLSG-EDWS-------DVDNLLGDDDD-DEDDGDDTYDD 459
           DT D EE    +  SG ED S       D D+++ DDD+ D  + +D Y++
Sbjct: 412 DTLDMEERELLESGSGDEDLSVGFEKDGDYDDVVTDDDEMDIGEVNDAYEE 445

The following BLAST results are available for this feature:

BLAST of MC00g0360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0MFS5	6.5e-173	62.97	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q65XL5	4.8e-160	65.93	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
B6TTV8	1.2e-155	64.69	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q689D6	4.8e-35	31.58	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
Q9ZUZ6	1.1e-23	27.42	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of MC00g0360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156569.1	0.0	100.00	protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]	[more]
XP_038900012.1	1.05e-303	86.96	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida]	[more]
XP_008461525.1	4.22e-302	85.55	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]	[more]
KAA0051010.1	5.49e-301	85.44	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK04397.1 prote...	[more]
XP_022960372.1	6.25e-296	83.88	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata]	[more]

BLAST of MC00g0360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTV5	0.0	100.00	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110234...	[more]
A0A1S3CG79	2.04e-302	85.55	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103500096 PE=4...	[more]
A0A5D3BY23	2.66e-301	85.44	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1H780	3.03e-296	83.88	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A6J1KW65	5.54e-292	83.30	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498122...	[more]

BLAST of MC00g0360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01037.1	4.6e-174	62.97	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G62990.1	1.4e-58	36.17	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G63090.1	7.4e-47	36.73	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G08940.1	2.6e-44	36.53	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G21970.1	2.5e-42	34.79	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 242..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 424..471
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..478
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 77..405 e-value: 6.8E-108 score: 360.5
IPR040293	Protein WHAT'S THIS FACTOR 1-like	PANTHER	PTHR31476:SF4	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 38..461
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 38..461

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0360.1	MC00g0360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
molecular_function	GO:0003723	RNA binding