MC00g0334 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0334
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Eukaryotic translation initiation factor 6
Location	scaffold109: 679893 .. 689462 (-)
RNA-Seq Expression	MC00g0334
Synteny	MC00g0334

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCCAAATATGTAACTAAAAAAACAAAACAATTAAAAAAAAGACCTATCGTTATAACTCAAATTATATTGATTTTTTACGACTCATTATCCTTATTTTCTATATAAAAAAACATAATAATATTAAAAAAAATCCATGATTAAAAAAAAAAATCATTTAAAAAGTAAAAAAAAAAAAAACAAAGAAACCCTAAAACATTTTTTCTCCCTCCCCTCCGACCCTCTTCTGCTCCCTCCCTCCCTCGAATTTTCTCTTCCCCAAGCTTCAGTCTCCACCGCCGCCGCCTTCAGTTGTCGCCGTCGCCGTCGCCGTACAGTGAGTTGAGGTTTGTCCCTTTTTTCTTTTATTTTTCGTTTCCTTTTCTCTTTTTAAAATCTAGTGGAAAACAGTACAACATGGACATAAACTAAAATATCTTTTCAAATAATTTCAAAATCGCTATTCTTTTTCTAATCTCCAAGAAAACCCTCGAGGACATTGCCGACTGTTACCACTTCGCAGAGCGCCCGCCGACCACTTTGCCGCCAACTGCTGCAGGGTTCGTACTTCTTTTCTCAACTTCATAACAAACAGAAAAATTTCGAACACTTTTAGATGCTAATCATTCTAAATTCTAACAAATATCTTATATTTTGATGGCTTTTTCCTATCGCCATTACTGTTTTTAGAAACTTTCATGTCGCCATGTCCATTTTGTATTGTTCATGTCCGTGTCTGTTCTTCTTAGGACACCCTCTTGTGTTATAATCAAGTGAGGGCCATGTTTAACTTCATTTTACCATGCAGGACTTGGAATTTATCTGTTGATTGATCAAAAATTTATCTTGCAACTCATGGCGACGAGTAAGTCTCACCAAGTGTTTTCTTCCACTTGTGGGGTTGTGTGACTACAATGTTTCTTATATGCTTTATTCATCAGGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCTTACTGTTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGGTTTTGTTTTCCACGATTCTATATAATGTATAGCAGAACAAAATAGAAAATGTTCTCTTTTTCAAATTGACTAGTTTGATCTGGAAGCAAGTTCTCACAAATTGTTTGCATGGTATAGTGCCTTCGAATCTGAATTGGGTGGTGTCATTCCGGTTGTTAAAGCATCCATTGATGGCACTCGCATTATTGGCCGCTTATGTGCTGGTTTGTCAAATTTATTTTTTGTTTCTCATTATTTTCCATATCTTTAGAAGGCACGTATTAATGTTGTGGGGCCCAATACTACTTATTTCATGTTGATCTAATATGTCAGTTTATTCATTTTCTTATATTCCTTATTGCAGGAAACAAAAATGGGCTTCTTGTACCCCACACCACTACTGATCAAGGCAAGCCTCTTTTCTACTTTCTTGTTCTTTTTATGAATGTGCGGCTAATTATATCGATCTCCCCTATTCACATGTTTCCTCTTATACACATTAATGATTGGAGGCCTATCAAATGTTCGATTCTTGCCTTTAACATGATACAATTCTAAATAGTTACCATCTTGATCAACAGGGTTTTCAGGTTGTTGTTTATGAATGCATTGTGCGTTTGAATTATTTTTTTGAAAAAGGAAACAAAAATATTCATTTATGAAATGAAAACTTACATAAGAGTAGCAATTGGCAAAGAACAGAAAACTAAATTACAGGACTCTGAACTCAATGTACTTGAAAAACTAGGAACACTAAACTACGCTCGAATCCTGATAAAAGAAAAAAGGGTCTAAATTTTAGACAATCCAAAAGCTTTCCATCTTCTACTTCTCTGGTTCAATAAAAACTCTCTGCTTGCATCTTTGAAAATTCTAAAAAAAATCTTTAAATACTGGATGCTGACAGGGAGGAAATAGCACTAACTCAAAGTGGAATGTGAACCAACTGCAGCTAAACAAAACCTTTGACAACTCACGAACTTTGAATACCGAACTGTGAGCACACATCCTTCAAACTTGAAAGCTTCCAAACCTACAAAATTCCAAACTAGTAACATTTTCAAATCATGTAACCTTTTTCAAGATCTAATAACAGCAGCTTGATTTCTTCAAAAGGAAACTTTCTGATTGCTTTAAATTTGAGGACGGAAGAAAAAACCACCGATGTGTCTTGATTCTTTTACAAATGTTGCCTGCTCAATACGTTAAGAAGAACCTTTGAAGACCAGAATCAGCAACAAATCTTGGATGCACGGATGAAGGAACAAAACATCATGAACCCCTAAAGATCGATTTCTTTTGGGTTCCCTTCTTCTTTCAGTTTGTGAAGTGTTGTGTGGGGAATGGGTTCAAAACTTATTTTTGGGAATACATTTGGTCTGGTGTTACGCGTCTTTGTTATAGATTTCCTTGTTTTTATTATTTGTCCTCTATGAAGTGTTTTTTGGTGGCTTCTGTCCTTCCTTTCTTGGGTTCTTTCTTTTCTATTTCGGCTCTTGCCATGGGCCCGTCCTTTGATTGAGATACAACCGATGCTGTGGACCTTTTGTCTTTGTTAGGGAGGGAGTGCACTTTGCCTTTGGGCCCCTCCCCATCTACGGGGTTTTATTGTAGTTCTTATTTCCATCTTTTGTGTGACCCTCCCTCTGGGCGTTTTTTATCCTTGCTGTGGAAGGTCAAAATTTCAAAGGATGTCAAATTATTTGCGTCCCCAATTTTACTCGGGAGGGTGAACGCTATGGACTGTATTGTGAGACATTCTTCTTTGTGGTGGGGCCGAAGTGATGTTGGCTAGAAATGCGGCTGAGGACATGGATCATCTCCTTTAGGGTCGTGAGTTTACTTGCCTAGTTTGGGACAACTTTTTTTAGGTGTTTGGTGTTTGTTTGGCTTGGATCAGGGAGTGTGCAGGTCTATGGTGGATGGTCTACCATTCAGGAGCAAGGGTTGGAATTTGTGGCAAGCTGGCTTCTTTGCCGTCCTTTGGGGCCTTTGGCTAGGGAGGAACAATAGACTTTGTAGAATGTTTGAGAGACCTTGGCAGGAGGTGTGATCATTAGCTAGGTTACCTCTTGGGTGTCGGTCTCTAAGGACTTTTGTAATTATCCTTTAAGTCTCATTATTTTGGATTGAGCTCATTTTTTAGGTAGGTGTAGGGCTCTTCTGGTTTCAGGCTGTTTTTTGTATGCCCTGTGCTTGTTCTTGTGTTGCTTGTATTATCTTTTTTTTTTCCCCTCAACAAAAGTGTGGTTTTTTCATAATAAGAAAAGGAACAAAAAGAACAAATATCAGGAGGAAAAACAAAGCTCAAGTCTCTAAAGCTTTAAGAACATAGCCACAGGGCTTTAAAAAGCTTGTTGAGGTGGCCGCCTAGGCGCTAGGTGCACTTGTCGTGCAAGGCGGAATTACAGAGCCGCGTGTTCCAAAAGGCTCTAAGGTGCAATGCTCGTGTGCCTTGGAGCTTCTGTGTTTTTTTTTAATTTTTTTATTATTATTTTTTTTAAAGAAACCTCCACCCTAAATGCAGAAACCCTTGCTTCTAGGGTTTTTTTCTTTTTTTTTTTTATTTATTTTGAAAGTCAGCTGCAAACTTAAATGGGCCTTGCCCAGTATGTTTATTATTTCTTAAGCCAGCTGCCAGCCTTTGCGATTTCTCTGGTGGCAATTTTTTGAACAACCCTTTGCTAAAAAAGATTTCTCCAACAGCCAGCCATTGCGATTTCTTTCTACAGCAACCAACCTTTGATCTTTAGATTTATATTTGCAATTATCCTACTATTTTAGAATTGTTTTCATGTTTTTTTTGGAACATTGTCTCCTTAATTTAAAAGACTAATAATATTTTGAATCTTATTTGGCTTTTTATATGTTATATTATATCTTGTTACCTGTTATAACTCTTTTATTTCCATAAATGTTTATATCCATATATATTTTTATATATAGTGCGCCTCGCAAAAAAAAGTCCGTTCTTTTTTTTTGCGCCTTGCGCTTAAGCTCCAGAAGACTATTGCACTTTAGTGTGCCTAAGCTTTAAAAAACACTGCATAGCCAAAAGAGACGAGGACCGACCCCAATGCAAGAATGGATAAAAACAAAGAAACATTTCAAGCTTCTGAAGGAACCCTAGAACTTGTAAAACTCTTGCTTTATTTTTATTATTTCTTCTTCTTTTCTCCCTTCTTTTTCTTACTCCCTTTCTTTTTTTTCTTCTCTGATTTTTCTTTCTTCTCTTTTTTCCCCTTCCTTTTTTGTTCTCACTTCTAACTTTTTTTGTTTTTGGAAACGAACGATTTCATTGATATAATGAAAAAAGGAGGGAGAGATGATTACAAAAAAGAATGAGGACCCACAGGCGGGTTACAAAAAAGCTCTCCAATTTGTCAATAAGGAGGCAAAGCTATACGAGTGGAAGAGGGGGGAGTATTTACACCAAGTAATGACTGAAAAAACAATGGATTCAAAAGTGGCATGTGGTGAGCGCTCCAAATCTTGGAAGATTTGACGGTTCCGCTCATTCCATGTAGTCCAAAGAAGAGCCCGAATGAAGTGTATCCATAGGCATATTGCCAAGTGTATCCATAGGCATATTGCCCACAAGAGTCGAAGCAAGCAGTTGAGACATATTGGTGGGGAGGGCAGCCGACCATCCAAAGAGGGGTAAGAGTTTGTTCCAAAGAGCTGCTGTGTAGGGGCATGTGAGGAATAGATGTCCGATGGACTCACTGTGTTGCTTGCATAGAGGGCACCATTGTGGAGATAAGGCCATATATGGCATGTGTCGCTGTAGTTTGTCGTGAGTATTCAATGCTTGGTGGCTAGCTTCCCATTGGAAGAACTTAATCTTCTTTGGGTAGGATTCCTTCCATATTGCTCTATAAAGATCCGGTGGAGTAGATGATGTGGATGCTTTGGAGGTCTTTGATGAGGGAGCTGGTAGTGAAGGATCCATGGGATTTCAGTCTCCAAACAATGGAGTCCCTATTCAGAGATGGTTGCTTTGAGGAAAGGCAGTGTAAAAGGGCAGCCAACTCAACAATCTCTGCGTCCTTGAGGTTTCTGCGAAAGCATAAATTCCAAGTTTTGGTTTCAAGAGACCAAAAGTCCCGAACATGGCCATGTTTCCTGGTATGAAGAGCAAAAAGGAGGGGGTAAGTTTGACATAAAGGTTCTTCATTGACCCATGTGTCTTTCCAAAACAGAGGGAGAGAGCCATCTCCCAACCGGCCATCTTCGTTGACCCATGTGTCTTTCTCTCACTTCTAACTGTTTAACATTTCTCCTGTTTCTACTCTTATTTTTTCCTTCAAACTTTTACCCTCCCACCTTATCGCTTTTACCTTTCTTTTCTTACAATCAGTTCTCTCCCCTTTTCTCTGTTTCCCCTACCTAAGACCTTCAAGCATTATCATCTACAAGAAGCTCATGGATTGTTCCTTTAGCAACCTTCTTTTCCTAGGCCTTCAGTAACACCAAAAAGATAACTACCAAAACAATATAAAGATAAAAATATCCGGAAGAAAAGAACCTCCAAATTTCGAAAATTAGACAGCCACCACCTGGAATATTATTCTAAATTATTAACAAAGGCCTTCCACCCAACAAGAATTTCATTAACAGAAAAATTATTATAAGACTTAGAAAGACTGCTCCAAGGAAGATTAATATCATCTAATTAATTCAAAACTCTCATGAAGAGCCTTTCCTATAAAAAATTCTATCATTGGCAAAATTCAACAATTGGTCCCCTTGGTAAAAGCATTGTAATTCTCCAATATTATCCTTGGAAAAATTCCTTTTAATCTTTCTGCAAAAATCTTTGCAATTATCTTATAATCACTTGTTGATCTAATTGGTGTATAATCACTCACTGCTTTGGCCTTCTTTAGTATCAAATTTATGAAATTTTCCTTCAACATCCATTCAAATGTCCGTGAACATAGAATTCTTCTGCAATTTTCATAAAGTCCAAAATTATCCAAAATGCTCTATATAATTCAACTGTGAAGCCATTTGGATCCCCCACTGCTTTGGCCTTCTCCTTCTTTGGAATAAACTTCAATTTTCCTTCACACATCTAGTCAAAAGCCCATTAATATAGAATGCTCTATATGAATTTTTCCTCTTTTCGCCTTCCCTTTTCTTGTTGTGTGGATGTTCTTAGTAGAGTGGTTTCGAGAGGTGTAGTGAGTAACATTATTGATGGTTTTTGTGTGGTGAGAGGGAGGAATCTCTTGCTGACTACCGTTTAAGTTTTTTACAAGTAGGAGAGGAATGTAGTAAGGGGGAGGGGAGATTTTTTTTTTTTCGTTTTCCAAGAAATAAAATTGTCCAATTTTTAGTGGTGGTCAGTTGGAAGATTTCTATTGGCTGGTCGGTTGGTAGCTAAGTATTGTTCCTTCTAACCTGCCTAACCTGCTTGTCTCATTTAATGCGTAGGCCTTTTCATCTTCCTTTCCAGCAACCTTTTTCCTGTTTTCCTGATCTGTCTGGATTCTCTTCTTATTTATATCCACTAGAAAGACTTTCTGATGGTTCATATTTCATCATAAACTTCCAACTTTCCATTCAACCCTATTTTCAATGTTTCCCATTGATAGTTCCAGGAAGCCTTTGAAAGCTTTTTTTAATGCTTACACCTTTGTATCATCTCCCACATCGATTTGAACAAATACATATCCTTCTTGAGGCAAATTGTTATCTATTTCCATGAGAAGAAAGCCACATAAATGTTCTCTTACCTCAAAATGTGCCACGTGACAATCTAACTAGTTCAACGTGTATGATGATAATCCTTCAAATCCACCACAATTGTTGCCCATAGCAACAAGAACATCTTTCTTCCACGAGGGTGAAGGTAAGTTCCTAATCTTTATCCAACCTCCATAGCTAGCCATCATGATCCATCACATTTTATCGTTCTAACTTGTAACAAATTTTGCCTATTAGTTCCACTTTGTATCCTTGCACAGACCCTTCATAACCTCCTTATTCTAAGATTTAGTAAAGCTTTGTCAGCTTGATAAGGTTTAACAATGCAGGCTCATAAACTTCCTTCATAAGTTCAGCTGAAATTAGCATCCTATCGTCATGATAATGTAGTCTTGACACTATAACGGTGCTTTCCCTATTAATCTCCAAAAGGTCTTCTCCTTCCGAAATTTCATCCCAATCTCGTACCTGATTGAAGCTTCTGGGATACCACCTCTGCATATGACTTCTTACCCTTTCCTTTATCATTAACCTTGTTGATTAACGTTTGTTAAGAGTCGCCCTTGGCTTTCTGGTTCTGCACTTCTCTTGTTTACTTCAAATACCTTCCGACATCAAATTTATTCTAGAATTCCCTTATGATTTTCCAGAAAATGGACCAGCCTTTTTTATTCACACCTGCCTGACTACATAACTCCTTTCCCCATTGCTGATCAGCGAAGTAAATTTGTGTCTCCATCAAAACTTGGTTCATCTTTTTATGCAACCATATGGTTCCCAAAGCTTCTCCTTCTTGACGAAAAAACTTCATGTTCAGTGGATTCTGAAGAGCCTATGGATTACCCCAGAGACTTCTCTAGCCATTTTAATCGGTCCTAGCTTATATTGATAACAAAATGATATCCTCTCCTGGTTTACTCCATCTTAATTTTTTTTCATGATTATCAGCATTAAGAAGAACAAAAAAGAACTTGTTTTCAACACAACAACTTGAATCACCCATTTAATCAAACCCTTAATCTCCCAAGTAAAAACAACTTAATAATCTAAAACATACAGACTGAATCTCAAAAAAGGAAGAAAGATGAAAACTCGACCTAGGGAGCATCATAGCTTGAATCACGAGCAAAAGAGAGGATAAAACCTTAATTGCCATCCTCTGATATTTGTAATTCTTGGTCTGGTATGCCCAGATTTCACTAACATACCTCTTGGAGAGGAAGTATGCCTAAAATAAAACCATGAGGTTGAATTATTAAATTCTGTAGTCTGTTTGGAGGTTCTATTTTGTGATGTCAGTGGAGCCTAACCATATCTTATATAATTTTAACTGTTGCTACAAAATCAATATGCGTTTCCATTTTTCCTCCATCTTCAAATGATCACTTTGGTGGCTGTCCCTGTCCTCAATTTTATGAGTTGAGCAACTACATCATTATGCAGTATTGAATTCATGTTGCACGGTCCCTGCAGTTGTAGGAATTGGCACTATTAAACTTGTGTCCATACAAGTTCCTTTATTGTGGATGCATCACGAAATTAATGTATGATTTTGTTTGTTCTGATTTCACGAAACTCTTTTAGATGTTCTCTAATTTATGTTAATATGTGATGTGTATCTCCAAATTATTTTAATTAAGATCATGTTCCTATTCTTTGCATTCTGAAGAACTTCAGCACTTGAGGAACAGTCTACCCGACCAAGTTGTTGTTCAACGCATACAAGAGAGACTATCTGCTTTAGGGAATACCATTGCTTGTAATGATCATGTTGCTCTCGCACATACTGATCTTGACCGGGTATTTTTACTTATTCTCTCCCCACTTAAAATTATGCTTCTAAGACTTCGTAGAAATTTAAAATTAAACCGTTTACTACATCACTATCACCTTTTTTAGTTTGTGACATTGCTCTCCTCCCCTTTTTCGCATTTGGACATTTCATATCTATGTGTTTAGTTGAAGATCTTATTCCCACCTTGGAAGCAGTGGCTCTTTTCTTTTGAGCAGTGTGGGTGTTCTTTTCTGAACTGATTGTCAGTGTTGCACATTTATAAATACTGGACAGGGTACAGAATACGGACACATTGTGTGGACTATCTTTCTTTGATTAATTTTTTCGAAAATTATGCATATGGAACTTTAGACTGCTTTAGTTCTCTTTCATTTATTCCCTTTCTACTAAGAATTAACATGTTCTCTTTTTGATCAGGAAACTGAAGAACTCATTGCTGATGTTCTCGGAGTAGAGGTCTTTAGGCAGACGGTGGCGGGTAACGTTCTTGTGGGAAGCTACTGCAGCTTCACAAATAGGGGTGGCTTGGTAAGTTTCATCCTTCCTGTTATTTTTTTCCAAGTGTAATCATCTCATATTGAGCTTTTTTAACATCATGGTGATAAATTCTCTGAGACCTGGTTTATGCAATCTCTCTTCAGGTTCATCCCCATACGTCTATTGAAGATTTGGACGAATTATCAACCCTTCTTCAGGTCCCTTTAGTAGCCGGAACTGTCAATCGTGGAAGTGAAGTGATTGCTGCTGGCTTAACAGCAAATGACTGGATTGCATTTTGTGGTTCAGACACTACTGCAACCGAGTTATCGGTGATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCGAGTTCGATTGTTGACGAGATGAGGAAGTCACTAATTGACAGTTACGTTTGAAGTTATATATTTTCTGTTACAGCTGTGAACTGCTTTGTTGTTACTTTTGCCTTTTCCTTTCATCATATTTAACAACTTTGTATGAATGAAATTGGGGTTTGTACTTGAAGCTTATTTGGTTGAAAATATATTTAACAATTAAGCTTGAGCAGTCCTAGAAATGT

mRNA sequence

ATGAATCCCAAATATGTAACTAAAAAAACAAAACAATTAAAAAAAAGACCTATCGTTATAACTCAAATTATATTGATTTTTTACGACTCATTATCCTTATTTTCTATATAAAAAAACATAATAATATTAAAAAAAATCCATGATTAAAAAAAAAAATCATTTAAAAAGTAAAAAAAAAAAAAACAAAGAAACCCTAAAACATTTTTTCTCCCTCCCCTCCGACCCTCTTCTGCTCCCTCCCTCCCTCGAATTTTCTCTTCCCCAAGCTTCAGTCTCCACCGCCGCCGCCTTCAGTTGTCGCCGTCGCCGTCGCCGTACAGTGAGTTGAGAAAACCCTCGAGGACATTGCCGACTGTTACCACTTCGCAGAGCGCCCGCCGACCACTTTGCCGCCAACTGCTGCAGGGACTTGGAATTTATCTGTTGATTGATCAAAAATTTATCTTGCAACTCATGGCGACGAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCTTACTGTTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTGCCTTCGAATCTGAATTGGGTGGTGTCATTCCGGTTGTTAAAGCATCCATTGATGGCACTCGCATTATTGGCCGCTTATGTGCTGAACTTCAGCACTTGAGGAACAGTCTACCCGACCAAGTTGTTGTTCAACGCATACAAGAGAGACTATCTGCTTTAGGGAATACCATTGCTTGTAATGATCATGTTGCTCTCGCACATACTGATCTTGACCGGGAAACTGAAGAACTCATTGCTGATGTTCTCGGAGTAGAGGTCTTTAGGCAGACGGTGGCGGGTAACGTTCTTGTGGGAAGCTACTGCAGCTTCACAAATAGGGGTGGCTTGGTTCATCCCCATACGTCTATTGAAGATTTGGACGAATTATCAACCCTTCTTCAGGTCCCTTTAGTAGCCGGAACTGTCAATCGTGGAAGTGAAGTGATTGCTGCTGGCTTAACAGCAAATGACTGGATTGCATTTTGTGGTTCAGACACTACTGCAACCGAGTTATCGGTGATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCGAGTTCGATTGTTGACGAGATGAGGAAGTCACTAATTGACAGTTACGTTTGAAGTTATATATTTTCTGTTACAGCTGTGAACTGCTTTGTTGTTACTTTTGCCTTTTCCTTTCATCATATTTAACAACTTTGTATGAATGAAATTGGGGTTTGTACTTGAAGCTTATTTGGTTGAAAATATATTTAACAATTAAGCTTGAGCAGTCCTAGAAATGT

Coding sequence (CDS)

ATGGCGACGAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCTTACTGTTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTGCCTTCGAATCTGAATTGGGTGGTGTCATTCCGGTTGTTAAAGCATCCATTGATGGCACTCGCATTATTGGCCGCTTATGTGCTGAACTTCAGCACTTGAGGAACAGTCTACCCGACCAAGTTGTTGTTCAACGCATACAAGAGAGACTATCTGCTTTAGGGAATACCATTGCTTGTAATGATCATGTTGCTCTCGCACATACTGATCTTGACCGGGAAACTGAAGAACTCATTGCTGATGTTCTCGGAGTAGAGGTCTTTAGGCAGACGGTGGCGGGTAACGTTCTTGTGGGAAGCTACTGCAGCTTCACAAATAGGGGTGGCTTGGTTCATCCCCATACGTCTATTGAAGATTTGGACGAATTATCAACCCTTCTTCAGGTCCCTTTAGTAGCCGGAACTGTCAATCGTGGAAGTGAAGTGATTGCTGCTGGCTTAACAGCAAATGACTGGATTGCATTTTGTGGTTCAGACACTACTGCAACCGAGTTATCGGTGATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCGAGTTCGATTGTTGACGAGATGAGGAAGTCACTAATTGACAGTTACGTTTGA

Protein sequence

MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCAELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

Homology

[Close]

BLAST of MC00g0334 vs. ExPASy Swiss-Prot
Match: Q9M060 (Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana OX=3702 GN=EIF6-2 PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 9.2e-111
Identity = 201/245 (82.04%), Postives = 220/245 (89.80%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFESEL  VIP+VK SI GTRIIG
Sbjct: 1   MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRI ERLSALGN IACND+VALAHTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVALAHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVP
Sbjct: 121 LDKETEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPHTSVEDLEELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 231
           LVAGTVNRGSEVIAAG+T NDW +FCGSDTTATELSVI+S+FKLREAQPSSIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGMTVNDWTSFCGSDTTATELSVIDSIFKLREAQPSSIVDEMRKSL 240

[Close]

BLAST of MC00g0334 vs. ExPASy Swiss-Prot
Match: Q9TU47 (Eukaryotic translation initiation factor 6 OS=Bos taurus OX=9913 GN=EIF6 PE=2 SV=2)

HSP 1 Score: 341.7 bits (875), Expect = 6.6e-93
Identity = 174/243 (71.60%), Postives = 193/243 (79.42%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MA R  FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV ASI G RIIG
Sbjct: 1   MAVRASFENNCEIGCFAKLTNSYCLVAIGGSENFYSVFEGELAGTIPVVHASIAGCRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           R+C                ELQH+RN LPD V ++R++ERLSALGN   CND+VAL H D
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNCLPDSVQIRRVEERLSALGNVTTCNDYVALVHPD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVP
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 229
           LVAGTVNRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SL
Sbjct: 181 LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSL 240

[Close]

BLAST of MC00g0334 vs. ExPASy Swiss-Prot
Match: P56537 (Eukaryotic translation initiation factor 6 OS=Homo sapiens OX=9606 GN=EIF6 PE=1 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.9e-92
Identity = 174/243 (71.60%), Postives = 192/243 (79.01%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MA R  FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL   IPVV ASI G RIIG
Sbjct: 1   MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           R+C                ELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H D
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVP
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 229
           LVAGTVNRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SL
Sbjct: 181 LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSL 240

[Close]

BLAST of MC00g0334 vs. ExPASy Swiss-Prot
Match: O55135 (Eukaryotic translation initiation factor 6 OS=Mus musculus OX=10090 GN=Eif6 PE=1 SV=2)

HSP 1 Score: 340.1 bits (871), Expect = 1.9e-92
Identity = 173/243 (71.19%), Postives = 193/243 (79.42%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MA R  FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV ASI G RIIG
Sbjct: 1   MAVRASFENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           R+C                ELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H D
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVP
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 229
           LVAGTVNRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SL
Sbjct: 181 LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSL 240

[Close]

BLAST of MC00g0334 vs. ExPASy Swiss-Prot
Match: Q3KRD8 (Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 5.6e-92
Identity = 172/243 (70.78%), Postives = 192/243 (79.01%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MA R  FEN+CE+G F+KLTN YCLVAIGGSENFYS FE EL   IPVV ASI G RIIG
Sbjct: 1   MAVRASFENNCEVGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           R+C                ELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H D
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVP
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 229
           LVAGTVNRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SL
Sbjct: 181 LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSL 240

[Close]

BLAST of MC00g0334 vs. NCBI nr
Match: XP_022147757.1 (eukaryotic translation initiation factor 6-2 [Momordica charantia] >XP_022147758.1 eukaryotic translation initiation factor 6-2 [Momordica charantia])

HSP 1 Score: 443 bits (1140), Expect = 1.86e-156
Identity = 230/245 (93.88%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG
Sbjct: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 230
           LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 240

[Close]

BLAST of MC00g0334 vs. NCBI nr
Match: XP_038880643.1 (eukaryotic translation initiation factor 6-2-like [Benincasa hispida])

HSP 1 Score: 439 bits (1128), Expect = 1.26e-154
Identity = 226/245 (92.24%), Postives = 229/245 (93.47%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKASIDGTRIIG
Sbjct: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKASIDGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVP
Sbjct: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 230
           LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSL 240

[Close]

BLAST of MC00g0334 vs. NCBI nr
Match: XP_038900322.1 (eukaryotic translation initiation factor 6-2 [Benincasa hispida])

HSP 1 Score: 435 bits (1119), Expect = 2.96e-153
Identity = 224/245 (91.43%), Postives = 227/245 (92.65%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKASIDGTRIIG
Sbjct: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVP
Sbjct: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 230
           LVAGTVNRGSEVIAAGLTANDW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSL 240

[Close]

BLAST of MC00g0334 vs. NCBI nr
Match: XP_022973842.1 (eukaryotic translation initiation factor 6-2 [Cucurbita maxima] >XP_023512387.1 eukaryotic translation initiation factor 6-2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512388.1 eukaryotic translation initiation factor 6-2 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6571328.1 Eukaryotic translation initiation factor 6-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 435 bits (1118), Expect = 4.20e-153
Identity = 225/245 (91.84%), Postives = 226/245 (92.24%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIG
Sbjct: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 230
           LVAGTVNRGSEVIAAGL ANDW AFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 240

[Close]

BLAST of MC00g0334 vs. NCBI nr
Match: XP_022931983.1 (eukaryotic translation initiation factor 6-2-like [Cucurbita moschata])

HSP 1 Score: 433 bits (1114), Expect = 1.71e-152
Identity = 224/245 (91.43%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIG
Sbjct: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 230
           LVAGTVNRGSEVIAAGL ANDW AFCGSDTTATELSVIESVFKLRE QPSSIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSL 240

[Close]

BLAST of MC00g0334 vs. ExPASy TrEMBL
Match: A0A6J1D392 (Eukaryotic translation initiation factor 6 OS=Momordica charantia OX=3673 GN=LOC111016616 PE=3 SV=1)

HSP 1 Score: 443 bits (1140), Expect = 9.01e-157
Identity = 230/245 (93.88%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG
Sbjct: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 230
           LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 240

[Close]

BLAST of MC00g0334 vs. ExPASy TrEMBL
Match: A0A6J1I8L9 (Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111472384 PE=3 SV=1)

HSP 1 Score: 435 bits (1118), Expect = 2.03e-153
Identity = 225/245 (91.84%), Postives = 226/245 (92.24%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIG
Sbjct: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 230
           LVAGTVNRGSEVIAAGL ANDW AFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 240

[Close]

BLAST of MC00g0334 vs. ExPASy TrEMBL
Match: A0A6J1F0A8 (Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC111438315 PE=3 SV=1)

HSP 1 Score: 433 bits (1114), Expect = 8.28e-153
Identity = 224/245 (91.43%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIG
Sbjct: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 230
           LVAGTVNRGSEVIAAGL ANDW AFCGSDTTATELSVIESVFKLRE QPSSIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSL 240

[Close]

BLAST of MC00g0334 vs. ExPASy TrEMBL
Match: A0A6J1L2F0 (Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111499780 PE=3 SV=1)

HSP 1 Score: 427 bits (1099), Expect = 1.60e-150
Identity = 220/245 (89.80%), Postives = 223/245 (91.02%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVK SIDGTRIIG
Sbjct: 1   MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 230
           LVAGTVNRGSEVIAAGL  NDW AFCGSDTTATELSV+ESVFKLREAQPSSIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLIVNDWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSL 240

[Close]

BLAST of MC00g0334 vs. ExPASy TrEMBL
Match: A0A6J1G8F7 (Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC111451787 PE=3 SV=1)

HSP 1 Score: 427 bits (1099), Expect = 1.60e-150
Identity = 220/245 (89.80%), Postives = 223/245 (91.02%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVK SIDGTRIIG
Sbjct: 1   MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 230
           LVAGTVNRGSEVIAAGL  NDW AFCGSDTTATELSV+ESVFKLREAQPSSIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLIVNDWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSL 240

[Close]

BLAST of MC00g0334 vs. TAIR 10
Match: AT3G55620.1 (Translation initiation factor IF6 )

HSP 1 Score: 401.0 bits (1029), Expect = 6.5e-112
Identity = 201/245 (82.04%), Postives = 220/245 (89.80%), Query Frame = 0


Query: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIG 60
           MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFESEL  VIP+VK SI GTRIIG
Sbjct: 1   MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIG 60

Query: 61  RLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCA               ELQHLRNSLPDQVVVQRI ERLSALGN IACND+VALAHTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVALAHTD 120

Query: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVP
Sbjct: 121 LDKETEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPHTSVEDLEELSTLLQVP 180

Query: 181 LVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSL 231
           LVAGTVNRGSEVIAAG+T NDW +FCGSDTTATELSVI+S+FKLREAQPSSIVDEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGMTVNDWTSFCGSDTTATELSVIDSIFKLREAQPSSIVDEMRKSL 240

[Close]

BLAST of MC00g0334 vs. TAIR 10
Match: AT2G39820.1 (Translation initiation factor IF6 )

HSP 1 Score: 306.2 bits (783), Expect = 2.2e-83
Identity = 155/247 (62.75%), Postives = 194/247 (78.54%), Query Frame = 0


Query: 1   MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFESELGGVIPVVKASIDGTRI 60
           MATRL ++ N+CEIGVFSKLTNAYCLV A   S NF++ +ES+L GVIP+V  SI G+  
Sbjct: 1   MATRLQYDNNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGT 60

Query: 61  IGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAH 120
           IG LC                ELQHLR+SLPD+VVVQRI+E + ALGN IACND+VAL H
Sbjct: 61  IGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVH 120

Query: 121 TDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQ 180
             L+++TEE+I+DVLGVEV+RQT+A N LVGSYCS +N GG+VH +T++E++ EL+ L+Q
Sbjct: 121 PKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSLSNNGGMVHSNTNVEEMVELANLVQ 180

Query: 181 VPLVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRK 231
           VPLVAGTVNRGS+VI+AGLT NDW AFCGSDTTA ELSV+ ++FKL ++QP  +  EMRK
Sbjct: 181 VPLVAGTVNRGSQVISAGLTVNDWTAFCGSDTTAVELSVVNNIFKLVQSQPDFVGSEMRK 240

The following BLAST results are available for this feature:

BLAST of MC00g0334 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M060	9.2e-111	82.04	Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9TU47	6.6e-93	71.60	Eukaryotic translation initiation factor 6 OS=Bos taurus OX=9913 GN=EIF6 PE=2 SV...	[more]
P56537	1.9e-92	71.60	Eukaryotic translation initiation factor 6 OS=Homo sapiens OX=9606 GN=EIF6 PE=1 ...	[more]
O55135	1.9e-92	71.19	Eukaryotic translation initiation factor 6 OS=Mus musculus OX=10090 GN=Eif6 PE=1...	[more]
Q3KRD8	5.6e-92	70.78	Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6...	[more]

BLAST of MC00g0334 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147757.1	1.86e-156	93.88	eukaryotic translation initiation factor 6-2 [Momordica charantia] >XP_022147758...	[more]
XP_038880643.1	1.26e-154	92.24	eukaryotic translation initiation factor 6-2-like [Benincasa hispida]	[more]
XP_038900322.1	2.96e-153	91.43	eukaryotic translation initiation factor 6-2 [Benincasa hispida]	[more]
XP_022973842.1	4.20e-153	91.84	eukaryotic translation initiation factor 6-2 [Cucurbita maxima] >XP_023512387.1 ...	[more]
XP_022931983.1	1.71e-152	91.43	eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]	[more]

BLAST of MC00g0334 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D392	9.01e-157	93.88	Eukaryotic translation initiation factor 6 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1I8L9	2.03e-153	91.84	Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1F0A8	8.28e-153	91.43	Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1L2F0	1.60e-150	89.80	Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1G8F7	1.60e-150	89.80	Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of MC00g0334 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55620.1	6.5e-112	82.04	Translation initiation factor IF6	[more]
AT2G39820.1	2.2e-83	62.75	Translation initiation factor IF6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002769	Translation initiation factor IF6	SMART	SM00654	eIF6neu2	coord: 3..189 e-value: 1.2E-114 score: 396.8
IPR002769	Translation initiation factor IF6	TIGRFAM	TIGR00323	TIGR00323	coord: 4..209 e-value: 3.0E-70 score: 233.9
IPR002769	Translation initiation factor IF6	PFAM	PF01912	eIF-6	coord: 4..188 e-value: 1.1E-62 score: 210.9
IPR002769	Translation initiation factor IF6	PIRSF	PIRSF006413	Transl_init_IF-6	coord: 1..211 e-value: 1.4E-78 score: 261.1
IPR002769	Translation initiation factor IF6	PANTHER	PTHR10784	EUKARYOTIC TRANSLATION INITIATION FACTOR 6	coord: 1..230
IPR002769	Translation initiation factor IF6	HAMAP	MF_00032	eIF_6	coord: 1..230 score: 121.320854
IPR002769	Translation initiation factor IF6	CDD	cd00527	IF6	coord: 2..208 e-value: 1.05686E-110 score: 314.993
None	No IPR available	GENE3D	3.75.10.10		coord: 1..210 e-value: 1.1E-102 score: 344.1
None	No IPR available	PANTHER	PTHR10784:SF8	EUKARYOTIC TRANSLATION INITIATION FACTOR 6	coord: 1..230
None	No IPR available	SUPERFAMILY	55909	Pentein	coord: 1..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0334.1	MC00g0334.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902626	assembly of large subunit precursor of preribosome
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0042256	mature ribosome assembly
biological_process	GO:0000054	ribosomal subunit export from nucleus
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0043023	ribosomal large subunit binding
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003743	translation initiation factor activity