MC00g0305 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC00g0305
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Locationscaffold113: 83916 .. 84356 (+)
RNA-Seq ExpressionMC00g0305
SyntenyMC00g0305
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCAGAGTGTTATTGAAATTAATGAAGATAAAGTTGTTGCTTGGTTCTTGACTTTGGTTAAGGATGACAGCGCAAGATATCCTTTAGTTGCTTATATAACTAATATGCCTTTGGAGGAGTCATTTGGTGTTATTAATTCAGGGAGTGAAAATTTAGTGCCTTCCTATGCTAATTTTTTTGTTATAATTGAAAGGAATTTTAAAGTTTATAAATATGTTGATATTACTAGTATGTTTTCTACATTTCAACTGAGAAGGATCTATTTGCAAATAAGGAACCTTGTAAAAAGCTTTTCAGTTTATGGCTATAAATAATAATTTTCAGTTCAAGATTTTGAAATCAAACTTCAAAATAGTCGAGTATGAATGCATCAGTTGGGTTGTCAATGGTATGTTAGAGCATCTCGTTATAGAGACATTGTTCTATGGATGATTAGAAAG

mRNA sequence

GTGCAGAGTGTTATTGAAATTAATGAAGATAAAGTTGTTGCTTGGTTCTTGACTTTGGTTAAGGATGACAGCGCAAGATATCCTTTAGTTGCTTATATAACTAATATGCCTTTGGAGGAGTCATTTGGTGTTATTAATTCAGGGAGTGAAAATTTAGTGCCTTCCTATGCTAATTTTTTTGTTATAATTGAAAGGAATTTTAAAGTTTATAAATATGTTGATATTACTAGTATGTTTTCTACATTTCAACTGAGAAGGATCTATTTGCAAATAAGGAACCTTAAAGCTTTTCAGTTTATGGCTATAAATAATAATTTTCAGTTCAAGATTTTGAAATCAAACTTCAAAATAGTCGAGTATGAATGCATCAGTGGTTGTCAATGGTATGTTAGAGCATCTCGTTATAGAGACATTGTTCTATGGATGATTAGAAAG

Coding sequence (CDS)

GTGCAGAGTGTTATTGAAATTAATGAAGATAAAGTTGTTGCTTGGTTCTTGACTTTGGTTAAGGATGACAGCGCAAGATATCCTTTAGTTGCTTATATAACTAATATGCCTTTGGAGGAGTCATTTGGTGTTATTAATTCAGGGAGTGAAAATTTAGTGCCTTCCTATGCTAATTTTTTTGTTATAATTGAAAGGAATTTTAAAGTTTATAAATATGTTGATATTACTAGTATGTTTTCTACATTTCAACTGAGAAGGATCTATTTGCAAATAAGGAACCTTAAAGCTTTTCAGTTTATGGCTATAAATAATAATTTTCAGTTCAAGATTTTGAAATCAAACTTCAAAATAGTCGAGTATGAATGCATCAGTGGTTGTCAATGGTATGTTAGAGCATCTCGTTATAGAGACATTGTTCTATGGATGATTAGAAAG

Protein sequence

VQSVIEINEDKVVAWFLTLVKDDSARYPLVAYITNMPLEESFGVINSGSENLVPSYANFFVIIERNFKVYKYVDITSMFSTFQLRRIYLQIRNLKAFQFMAINNNFQFKILKSNFKIVEYECISGCQWYVRASRYRDIVLWMIRK
Homology
BLAST of MC00g0305 vs. NCBI nr
Match: XP_038907134.1 (uncharacterized protein LOC120092945 [Benincasa hispida])

HSP 1 Score: 118 bits (296), Expect = 1.02e-27
Identity = 65/149 (43.62%), Postives = 95/149 (63.76%), Query Frame = 0

Query: 1   VQSVIEINEDKVVAWFLTLVKDDSARYPLVAYITNMPLEESFGVINSGSENLVPSYANFF 60
           VQ+++EI+EDK VAWFLTLVK+ S R+PLVA++T+M LE S  V++S +EN +       
Sbjct: 67  VQNIVEIHEDKDVAWFLTLVKEQSTRHPLVAHVTSMCLEGSSSVVSSEAENYLSIVPYSM 126

Query: 61  VIIERNFKVYKYVDITSMFS---TFQLRRIYLQIRNLKAFQFMAINNNFQFKILKSNFKI 120
            +I+ +F+V   + I         F  + I       K F ++A+  NF+FK L+SN + 
Sbjct: 127 PMIDDDFQVIMDIHIARDLKEKDVFASKEILS-----KCFYYIAVKKNFEFKTLRSNSRS 186

Query: 121 VEYECIS-GCQWYVRASRYRDIVLWMIRK 145
           +E+ C+  GCQWYVRASRY+   LWM+RK
Sbjct: 187 IEFRCVQDGCQWYVRASRYKASDLWMLRK 210

BLAST of MC00g0305 vs. NCBI nr
Match: KAA0046135.1 (uncharacterized protein E6C27_scaffold157G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (270), Expect = 5.60e-26
Identity = 66/156 (42.31%), Postives = 102/156 (65.38%), Query Frame = 0

Query: 1   VQSVIEINEDKVVAWFLTLVKDDSARYPLVAY----ITNMPLEESFGVINSGSENL---V 60
           +Q+V++I EDK V WFL+LVK    R+PLVA+    ++NM LE S  V++SG +NL   +
Sbjct: 69  IQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWS-SVVDSGMDNLCSLL 128

Query: 61  PSYANFFVIIERNFKVYKYVDITSMFSTFQLRR--IYLQIRNL-KAFQFMAINNNFQFKI 120
           PS +     I+ +F++   + ++S+ STF L+   ++     L K+F ++AI NNF+FKI
Sbjct: 129 PSSS-----IDDDFQILTDIHVSSLSSTFNLKEKDMFASKELLSKSFYYIAIKNNFEFKI 188

Query: 121 LKSNFKIVEYECIS-GCQWYVRASRYRDIVLWMIRK 145
           ++SN K +E++C    C WYVRASRY+   LW +RK
Sbjct: 189 VRSNSKSIEFKCSQDNCPWYVRASRYKGGKLWRLRK 218

BLAST of MC00g0305 vs. NCBI nr
Match: TYK30673.1 (uncharacterized protein E5676_scaffold1704G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (268), Expect = 2.65e-25
Identity = 65/156 (41.67%), Postives = 101/156 (64.74%), Query Frame = 0

Query: 1   VQSVIEINEDKVVAWFLTLVKDDSARYPLVAY----ITNMPLEESFGVINSGSENL---V 60
           +Q+V++I EDK V WFL+LVK    R+PLVA+    ++NM LE S  V++SG +NL   +
Sbjct: 69  IQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWS-SVVDSGMDNLCSLL 128

Query: 61  PSYANFFVIIERNFKVYKYVDITSMFSTFQLRR--IYLQIRNL-KAFQFMAINNNFQFKI 120
           PS +     I+ +F++   + ++S+ STF L+   ++     L K+F ++AI NNF+FK 
Sbjct: 129 PSSS-----IDEDFQILTNIHVSSLSSTFDLKEKEMFASKELLSKSFYYIAIKNNFEFKT 188

Query: 121 LKSNFKIVEYECIS-GCQWYVRASRYRDIVLWMIRK 145
           ++SN K +E++C    C WYVRASRY+   LW +RK
Sbjct: 189 VRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRK 218

BLAST of MC00g0305 vs. NCBI nr
Match: KAA0067349.1 (uncharacterized protein E6C27_scaffold179G00600 [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (268), Expect = 2.65e-25
Identity = 65/156 (41.67%), Postives = 101/156 (64.74%), Query Frame = 0

Query: 1   VQSVIEINEDKVVAWFLTLVKDDSARYPLVAY----ITNMPLEESFGVINSGSENL---V 60
           +Q+V++I EDK V WFL+LVK    R+PLVA+    ++NM LE S  V++SG +NL   +
Sbjct: 69  IQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWS-SVVDSGMDNLCSLL 128

Query: 61  PSYANFFVIIERNFKVYKYVDITSMFSTFQLRR--IYLQIRNL-KAFQFMAINNNFQFKI 120
           PS +     I+ +F++   + ++S+ STF L+   ++     L K+F ++AI NNF+FK 
Sbjct: 129 PSSS-----IDEDFQILTNIHVSSLSSTFDLKEKEMFASKELLSKSFYYIAIKNNFEFKT 188

Query: 121 LKSNFKIVEYECIS-GCQWYVRASRYRDIVLWMIRK 145
           ++SN K +E++C    C WYVRASRY+   LW +RK
Sbjct: 189 VRSNSKSIEFKCSEDNCPWYVRASRYKGGELWRLRK 218

BLAST of MC00g0305 vs. NCBI nr
Match: KAA0066702.1 (uncharacterized protein E6C27_scaffold271G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 105 bits (262), Expect = 8.13e-25
Identity = 65/156 (41.67%), Postives = 101/156 (64.74%), Query Frame = 0

Query: 1   VQSVIEINEDKVVAWFLTLVKDDSARYPLVAY----ITNMPLEESFGVINSGSENL---V 60
           +Q+V++I EDK V WFL+LVK    R+PLVA+    ++NM LE S  V++SG +NL   +
Sbjct: 69  IQNVVQIQEDKDVTWFLSLVKGHITRHPLVAHAIAHVSNMDLEWS-SVVDSGMDNLCSLL 128

Query: 61  PSYANFFVIIERNFKVYKYVDITSMFSTFQLRR--IYLQIRNL-KAFQFMAINNNFQFKI 120
           PS +     I+ +F++   + ++S+ STF L+   ++     L K+F ++AI NNF+FK 
Sbjct: 129 PSSS-----IDDDFQILTDIHVSSLSSTFDLKENDMFASKELLSKSFYYIAIKNNFEFKT 188

Query: 121 LKSNFKIVEYECIS-GCQWYVRASRYRDIVLWMIRK 145
           ++SN K +E++C    C WYVRASRY+   LW +RK
Sbjct: 189 VRSNSKSMEFKCSQDNCPWYVRASRYKGGELWRLRK 218

BLAST of MC00g0305 vs. ExPASy TrEMBL
Match: A0A5A7TXI0 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00750 PE=4 SV=1)

HSP 1 Score: 108 bits (270), Expect = 2.71e-26
Identity = 66/156 (42.31%), Postives = 102/156 (65.38%), Query Frame = 0

Query: 1   VQSVIEINEDKVVAWFLTLVKDDSARYPLVAY----ITNMPLEESFGVINSGSENL---V 60
           +Q+V++I EDK V WFL+LVK    R+PLVA+    ++NM LE S  V++SG +NL   +
Sbjct: 69  IQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWS-SVVDSGMDNLCSLL 128

Query: 61  PSYANFFVIIERNFKVYKYVDITSMFSTFQLRR--IYLQIRNL-KAFQFMAINNNFQFKI 120
           PS +     I+ +F++   + ++S+ STF L+   ++     L K+F ++AI NNF+FKI
Sbjct: 129 PSSS-----IDDDFQILTDIHVSSLSSTFNLKEKDMFASKELLSKSFYYIAIKNNFEFKI 188

Query: 121 LKSNFKIVEYECIS-GCQWYVRASRYRDIVLWMIRK 145
           ++SN K +E++C    C WYVRASRY+   LW +RK
Sbjct: 189 VRSNSKSIEFKCSQDNCPWYVRASRYKGGKLWRLRK 218

BLAST of MC00g0305 vs. ExPASy TrEMBL
Match: A0A5A7VQ50 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold179G00600 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 1.28e-25
Identity = 65/156 (41.67%), Postives = 101/156 (64.74%), Query Frame = 0

Query: 1   VQSVIEINEDKVVAWFLTLVKDDSARYPLVAY----ITNMPLEESFGVINSGSENL---V 60
           +Q+V++I EDK V WFL+LVK    R+PLVA+    ++NM LE S  V++SG +NL   +
Sbjct: 69  IQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWS-SVVDSGMDNLCSLL 128

Query: 61  PSYANFFVIIERNFKVYKYVDITSMFSTFQLRR--IYLQIRNL-KAFQFMAINNNFQFKI 120
           PS +     I+ +F++   + ++S+ STF L+   ++     L K+F ++AI NNF+FK 
Sbjct: 129 PSSS-----IDEDFQILTNIHVSSLSSTFDLKEKEMFASKELLSKSFYYIAIKNNFEFKT 188

Query: 121 LKSNFKIVEYECIS-GCQWYVRASRYRDIVLWMIRK 145
           ++SN K +E++C    C WYVRASRY+   LW +RK
Sbjct: 189 VRSNSKSIEFKCSEDNCPWYVRASRYKGGELWRLRK 218

BLAST of MC00g0305 vs. ExPASy TrEMBL
Match: A0A5D3E3H4 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1704G00160 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 1.28e-25
Identity = 65/156 (41.67%), Postives = 101/156 (64.74%), Query Frame = 0

Query: 1   VQSVIEINEDKVVAWFLTLVKDDSARYPLVAY----ITNMPLEESFGVINSGSENL---V 60
           +Q+V++I EDK V WFL+LVK    R+PLVA+    ++NM LE S  V++SG +NL   +
Sbjct: 69  IQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWS-SVVDSGMDNLCSLL 128

Query: 61  PSYANFFVIIERNFKVYKYVDITSMFSTFQLRR--IYLQIRNL-KAFQFMAINNNFQFKI 120
           PS +     I+ +F++   + ++S+ STF L+   ++     L K+F ++AI NNF+FK 
Sbjct: 129 PSSS-----IDEDFQILTNIHVSSLSSTFDLKEKEMFASKELLSKSFYYIAIKNNFEFKT 188

Query: 121 LKSNFKIVEYECIS-GCQWYVRASRYRDIVLWMIRK 145
           ++SN K +E++C    C WYVRASRY+   LW +RK
Sbjct: 189 VRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRK 218

BLAST of MC00g0305 vs. ExPASy TrEMBL
Match: A0A5A7VEB2 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G00350 PE=4 SV=1)

HSP 1 Score: 105 bits (262), Expect = 3.94e-25
Identity = 65/156 (41.67%), Postives = 101/156 (64.74%), Query Frame = 0

Query: 1   VQSVIEINEDKVVAWFLTLVKDDSARYPLVAY----ITNMPLEESFGVINSGSENL---V 60
           +Q+V++I EDK V WFL+LVK    R+PLVA+    ++NM LE S  V++SG +NL   +
Sbjct: 69  IQNVVQIQEDKDVTWFLSLVKGHITRHPLVAHAIAHVSNMDLEWS-SVVDSGMDNLCSLL 128

Query: 61  PSYANFFVIIERNFKVYKYVDITSMFSTFQLRR--IYLQIRNL-KAFQFMAINNNFQFKI 120
           PS +     I+ +F++   + ++S+ STF L+   ++     L K+F ++AI NNF+FK 
Sbjct: 129 PSSS-----IDDDFQILTDIHVSSLSSTFDLKENDMFASKELLSKSFYYIAIKNNFEFKT 188

Query: 121 LKSNFKIVEYECIS-GCQWYVRASRYRDIVLWMIRK 145
           ++SN K +E++C    C WYVRASRY+   LW +RK
Sbjct: 189 VRSNSKSMEFKCSQDNCPWYVRASRYKGGELWRLRK 218

BLAST of MC00g0305 vs. ExPASy TrEMBL
Match: A0A5A7V7K0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold381G00870 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 7.33e-25
Identity = 66/156 (42.31%), Postives = 101/156 (64.74%), Query Frame = 0

Query: 1   VQSVIEINEDKVVAWFLTLVKDDSARYPLVAY----ITNMPLEESFGVINSGSENL---V 60
           +Q+V++I EDK V WFL+LVK    R+PLVA+    ++NM LE  F V++SG +NL   +
Sbjct: 69  IQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEW-FSVVDSGMDNLCSLL 128

Query: 61  PSYANFFVIIERNFKVYKYVDITSMFSTFQLRR--IYLQIRNL-KAFQFMAINNNFQFKI 120
           PS +     I+ +F++   V ++S+ STF L+   ++     L K+F ++AI NNF+FK 
Sbjct: 129 PSSS-----IDDDFQILTDVHVSSLSSTFNLKEKDMFASKELLSKSFYYIAIKNNFEFKT 188

Query: 121 LKSNFKIVEYECIS-GCQWYVRASRYRDIVLWMIRK 145
           ++SN K +E++C    C WYVRASRY+   LW +RK
Sbjct: 189 VRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRK 218

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038907134.11.02e-2743.62uncharacterized protein LOC120092945 [Benincasa hispida][more]
KAA0046135.15.60e-2642.31uncharacterized protein E6C27_scaffold157G00750 [Cucumis melo var. makuwa][more]
TYK30673.12.65e-2541.67uncharacterized protein E5676_scaffold1704G00160 [Cucumis melo var. makuwa][more]
KAA0067349.12.65e-2541.67uncharacterized protein E6C27_scaffold179G00600 [Cucumis melo var. makuwa][more]
KAA0066702.18.13e-2541.67uncharacterized protein E6C27_scaffold271G00350 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5A7TXI02.71e-2642.31DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5A7VQ501.28e-2541.67DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5D3E3H41.28e-2541.67DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5A7VEB23.94e-2541.67DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5A7V7K07.33e-2542.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004332Transposase, MuDR, plantPFAMPF03108DBD_Tnp_Mutcoord: 95..143
e-value: 2.5E-6
score: 27.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC00g0305.1MC00g0305.1mRNA