MC00g0150 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0150
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	50S ribosomal protein L2, chloroplastic
Location	scaffold15: 570884 .. 571360 (+)
RNA-Seq Expression	MC00g0150
Synteny	MC00g0150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAATTACATGGCTACTCTCGACATCAATTCACAGATCGGAAGCTGCATGCCGCTTTCTGCAATGCGTATCGGTACAATGATCCACAACATCGAAATGAATCCGGGTCAAGGTGGGAAGCTGGTTCGAGCAGCAGGAACATGTGCAAAGATACTGAAAGAGCCAACATCAAGATACTGCTTGGTGAGGCTCCCTTCAGGTACTGAGAAGTTGATCGATTCTCGATGCAGGGCGACGATTGGTCAGGTGTCTAACCCAAGCCATGGAACTAAGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTGGGTCGACGACCGGTGGTTCGGGGTGTGGCGATGAACCCGGTGGATCATCCTCATGGAGGAGGTGAGGGTAGGAGCAAGAGTAGTGGGAGCTTTGGCAAAGGGTCTCGCACACCTTGGGGGAAGCCTACCAAGTCAGGTTACAAGACTGGACCTCTCAAGCGCAAGAAA

mRNA sequence

ATGACCAATTACATGGCTACTCTCGACATCAATTCACAGATCGGAAGCTGCATGCCGCTTTCTGCAATGCGTATCGGTACAATGATCCACAACATCGAAATGAATCCGGGTCAAGGTGGGAAGCTGGTTCGAGCAGCAGGAACATGTGCAAAGATACTGAAAGAGCCAACATCAAGATACTGCTTGGTGAGGCTCCCTTCAGGTACTGAGAAGTTGATCGATTCTCGATGCAGGGCGACGATTGGTCAGGTGTCTAACCCAAGCCATGGAACTAAGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTGGGTCGACGACCGGTGGTTCGGGGTGTGGCGATGAACCCGGTGGATCATCCTCATGGAGGAGGTGAGGGTAGGAGCAAGAGTAGTGGGAGCTTTGGCAAAGGGTCTCGCACACCTTGGGGGAAGCCTACCAAGTCAGGTTACAAGACTGGACCTCTCAAGCGCAAGAAA

Coding sequence (CDS)

ATGACCAATTACATGGCTACTCTCGACATCAATTCACAGATCGGAAGCTGCATGCCGCTTTCTGCAATGCGTATCGGTACAATGATCCACAACATCGAAATGAATCCGGGTCAAGGTGGGAAGCTGGTTCGAGCAGCAGGAACATGTGCAAAGATACTGAAAGAGCCAACATCAAGATACTGCTTGGTGAGGCTCCCTTCAGGTACTGAGAAGTTGATCGATTCTCGATGCAGGGCGACGATTGGTCAGGTGTCTAACCCAAGCCATGGAACTAAGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTGGGTCGACGACCGGTGGTTCGGGGTGTGGCGATGAACCCGGTGGATCATCCTCATGGAGGAGGTGAGGGTAGGAGCAAGAGTAGTGGGAGCTTTGGCAAAGGGTCTCGCACACCTTGGGGGAAGCCTACCAAGTCAGGTTACAAGACTGGACCTCTCAAGCGCAAGAAA

Protein sequence

MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK

Homology

[Close]

BLAST of MC00g0150 vs. ExPASy Swiss-Prot
Match: P0C8K6 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-54
Identity = 103/146 (70.55%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 8   LDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVRLPS 67
           LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL RAAGT AKI+KEP S+ CLVRLPS
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPS 413

Query: 68  GTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGR 127
           G EKLIDSRCRATIG VSNP+HG +KLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGEGR
Sbjct: 414 GVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGR 473

Query: 128 SKSSGSFGKGSRTPWGKPTKSGYKTG 154
           +K     G+ S +PWGKPTK+G++ G
Sbjct: 474 TKG----GRPSVSPWGKPTKAGFRAG 494

[Close]

BLAST of MC00g0150 vs. ExPASy Swiss-Prot
Match: Q2F969 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-54
Identity = 103/146 (70.55%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 8   LDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVRLPS 67
           LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL RAAGT AKI+KEP S+ CLVRLPS
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPS 413

Query: 68  GTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGR 127
           G EKLIDSRCRATIG VSNP+HG +KLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGEGR
Sbjct: 414 GVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGR 473

Query: 128 SKSSGSFGKGSRTPWGKPTKSGYKTG 154
           +K     G+ S +PWGKPTK+G++ G
Sbjct: 474 TKG----GRPSVSPWGKPTKAGFRAG 494

[Close]

BLAST of MC00g0150 vs. ExPASy Swiss-Prot
Match: P92812 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RPL2 PE=2 SV=2)

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-54
Identity = 103/146 (70.55%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 8   LDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVRLPS 67
           LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL RAAGT AKI+KEP S+ CLVRLPS
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPS 413

Query: 68  GTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGR 127
           G EKLIDSRCRATIG VSNP+HG +KLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGEGR
Sbjct: 414 GVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGR 473

Query: 128 SKSSGSFGKGSRTPWGKPTKSGYKTG 154
           +K     G+ S +PWGKPTK+G++ G
Sbjct: 474 TKG----GRPSVSPWGKPTKAGFRAG 494

[Close]

BLAST of MC00g0150 vs. ExPASy Swiss-Prot
Match: P26859 (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 194.9 bits (494), Expect = 6.9e-49
Identity = 97/146 (66.44%), Postives = 116/146 (79.45%), Query Frame = 0


Query: 14  IGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKIL-KEPTSRYCLVRLPSGTEKL 73
           +G+C+PL+ + IGT +HNIE NPGQG KL RAAGT A+I+ K   +  C+VRLPSG +KL
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418

Query: 74  IDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSG 133
           IDSRCRATIG VSN +HG +K  KAGQSRWLGRRP+VRGVAMNPVDHPHGGGEGR+K   
Sbjct: 419 IDSRCRATIGIVSNLNHGKRKFNKAGQSRWLGRRPIVRGVAMNPVDHPHGGGEGRTKG-- 478

Query: 134 SFGKGSRTPWGKPTKSGYKTGPLKRK 159
             G+ S +PWGKPTK G+KT   KR+
Sbjct: 479 --GRPSVSPWGKPTKGGFKTVVRKRR 500

[Close]

BLAST of MC00g0150 vs. ExPASy Swiss-Prot
Match: C3P9Q8 (50S ribosomal protein L2 OS=Bacillus anthracis (strain A0248) OX=592021 GN=rplB PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 81/148 (54.73%), Postives = 107/148 (72.30%), Query Frame = 0


Query: 5   MATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVR 64
           M+  + + +IG+ +PL  + +GT++HNIE+ PG+GG+LVR+AGT A++L +   +Y LVR
Sbjct: 117 MSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVR 176

Query: 65  LPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGG 124
           L SG  +L+ S CRAT+GQV N SH   K+ KAG+SRWLG+RP VRG  MNPVDHPHGGG
Sbjct: 177 LTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGG 236

Query: 125 EGRSKSSGSFGKGSRTPWGKPTKSGYKT 153
           EGRS       K   +PWGKPT  G+KT
Sbjct: 237 EGRSPIG---RKSPMSPWGKPT-LGFKT 259

[Close]

BLAST of MC00g0150 vs. NCBI nr
Match: XP_022158562.1 (uncharacterized protein LOC111025017 [Momordica charantia] >XP_022158563.1 uncharacterized protein LOC111025017 [Momordica charantia] >XP_022158564.1 uncharacterized protein LOC111025017 [Momordica charantia])

HSP 1 Score: 326 bits (835), Expect = 1.05e-111
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY
Sbjct: 56  MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 115

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 116 CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 175

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 159
           HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK
Sbjct: 176 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 214

[Close]

BLAST of MC00g0150 vs. NCBI nr
Match: XP_022932015.1 (uncharacterized protein LOC111438344 [Cucurbita moschata])

HSP 1 Score: 320 bits (820), Expect = 1.77e-109
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           MTNYMATLDINSQIGSCMPLSAMRIGT+IHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY
Sbjct: 52  MTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 111

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CLVRLPSGTEKLIDS+CRATIGQVSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 112 CLVRLPSGTEKLIDSKCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 171

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 159
           HGGGEGRSKSSGSFGKGSRTPWGKPTK GYKTGPLKRKK
Sbjct: 172 HGGGEGRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 210

[Close]

BLAST of MC00g0150 vs. NCBI nr
Match: XP_023512394.1 (uncharacterized protein LOC111777160 [Cucurbita pepo subsp. pepo] >KAG6571355.1 60S ribosomal protein L2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011127.1 60S ribosomal protein L2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320 bits (820), Expect = 1.77e-109
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           MTNYMATLDINSQIGSCMPLSAMRIGT+IHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY
Sbjct: 52  MTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 111

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CLVRLPSGTEKLIDS+CRATIGQVSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 112 CLVRLPSGTEKLIDSKCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 171

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 159
           HGGGEGRSKSSGSFGKGSRTPWGKPTK GYKTGPLKRKK
Sbjct: 172 HGGGEGRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 210

[Close]

BLAST of MC00g0150 vs. NCBI nr
Match: XP_022948169.1 (uncharacterized protein LOC111451827 isoform X2 [Cucurbita moschata] >XP_022948170.1 uncharacterized protein LOC111451827 isoform X2 [Cucurbita moschata] >KAG6605312.1 60S ribosomal protein L2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035267.1 60S ribosomal protein L2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317 bits (813), Expect = 2.29e-108
Identity = 152/159 (95.60%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           M+NYMAT+DINSQIGSCMPLSAMRIGT+IHN+E+NPGQGGKLVR+AGTCAKILKEPTSRY
Sbjct: 55  MSNYMATIDINSQIGSCMPLSAMRIGTIIHNLEINPGQGGKLVRSAGTCAKILKEPTSRY 114

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CLVRLPSGTEKLIDSRCRATIGQVSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 115 CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 174

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 159
           HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK
Sbjct: 175 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 213

[Close]

BLAST of MC00g0150 vs. NCBI nr
Match: XP_023532111.1 (uncharacterized protein LOC111794372 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023532112.1 uncharacterized protein LOC111794372 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317 bits (813), Expect = 2.37e-108
Identity = 152/159 (95.60%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           M+NYMAT+DINSQIGSCMPLSAMRIGT+IHN+E+NPGQGGKLVR+AGTCAKILKEPTSRY
Sbjct: 56  MSNYMATIDINSQIGSCMPLSAMRIGTIIHNLEINPGQGGKLVRSAGTCAKILKEPTSRY 115

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CLVRLPSGTEKLIDSRCRATIGQVSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 116 CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 175

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 159
           HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK
Sbjct: 176 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 214

[Close]

BLAST of MC00g0150 vs. ExPASy TrEMBL
Match: A0A6J1DZS5 (uncharacterized protein LOC111025017 OS=Momordica charantia OX=3673 GN=LOC111025017 PE=3 SV=1)

HSP 1 Score: 326 bits (835), Expect = 5.09e-112
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY
Sbjct: 56  MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 115

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 116 CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 175

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 159
           HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK
Sbjct: 176 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 214

[Close]

BLAST of MC00g0150 vs. ExPASy TrEMBL
Match: A0A6J1F113 (uncharacterized protein LOC111438344 OS=Cucurbita moschata OX=3662 GN=LOC111438344 PE=3 SV=1)

HSP 1 Score: 320 bits (820), Expect = 8.55e-110
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           MTNYMATLDINSQIGSCMPLSAMRIGT+IHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY
Sbjct: 52  MTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 111

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CLVRLPSGTEKLIDS+CRATIGQVSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 112 CLVRLPSGTEKLIDSKCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 171

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 159
           HGGGEGRSKSSGSFGKGSRTPWGKPTK GYKTGPLKRKK
Sbjct: 172 HGGGEGRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 210

[Close]

BLAST of MC00g0150 vs. ExPASy TrEMBL
Match: A0A6J1G933 (uncharacterized protein LOC111451827 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451827 PE=3 SV=1)

HSP 1 Score: 317 bits (813), Expect = 1.11e-108
Identity = 152/159 (95.60%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           M+NYMAT+DINSQIGSCMPLSAMRIGT+IHN+E+NPGQGGKLVR+AGTCAKILKEPTSRY
Sbjct: 55  MSNYMATIDINSQIGSCMPLSAMRIGTIIHNLEINPGQGGKLVRSAGTCAKILKEPTSRY 114

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CLVRLPSGTEKLIDSRCRATIGQVSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 115 CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 174

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 159
           HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK
Sbjct: 175 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 213

[Close]

BLAST of MC00g0150 vs. ExPASy TrEMBL
Match: A0A6J1I7S9 (uncharacterized protein LOC111470392 OS=Cucurbita maxima OX=3661 GN=LOC111470392 PE=3 SV=1)

HSP 1 Score: 316 bits (810), Expect = 2.86e-108
Identity = 153/159 (96.23%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           MTNYMATLDINSQIGSCMPLSAMRIGT+IHNI MNPGQGGKLVR+AGTCAKILKEPTSRY
Sbjct: 52  MTNYMATLDINSQIGSCMPLSAMRIGTIIHNIGMNPGQGGKLVRSAGTCAKILKEPTSRY 111

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CLVRLPSGTEKLIDS+CRATIGQVSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 112 CLVRLPSGTEKLIDSKCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 171

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 159
           HGGGEGRSKSSGSFGKGSRTPWGKPTK GYKTGPLKRKK
Sbjct: 172 HGGGEGRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 210

[Close]

BLAST of MC00g0150 vs. ExPASy TrEMBL
Match: A0A6J1G8M5 (uncharacterized protein LOC111451827 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451827 PE=3 SV=1)

HSP 1 Score: 317 bits (813), Expect = 9.04e-108
Identity = 152/159 (95.60%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           M+NYMAT+DINSQIGSCMPLSAMRIGT+IHN+E+NPGQGGKLVR+AGTCAKILKEPTSRY
Sbjct: 116 MSNYMATIDINSQIGSCMPLSAMRIGTIIHNLEINPGQGGKLVRSAGTCAKILKEPTSRY 175

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CLVRLPSGTEKLIDSRCRATIGQVSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 176 CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 235

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 159
           HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK
Sbjct: 236 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 274

[Close]

BLAST of MC00g0150 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family )

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-60
Identity = 115/159 (72.33%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           M   M  +DINS IGS MPL  MRIGT+IHNIEMNPGQG K+VRAAGT AKILKEP    
Sbjct: 46  MKEEMLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGK 105

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CL++LPSG  K I+++CRATIG VSNPSHGTKKL KAGQSRWLG RP VRGVAMNP DHP
Sbjct: 106 CLIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHP 165

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 160
           HGGGEG+SKSSGS G+ S +PWGKP K GYK+  +K+KK
Sbjct: 166 HGGGEGKSKSSGSRGRTSVSPWGKPCKGGYKSASVKKKK 204

[Close]

BLAST of MC00g0150 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family )

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-60
Identity = 115/159 (72.33%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 1   MTNYMATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRY 60
           M   M  +DINS IGS MPL  MRIGT+IHNIEMNPGQG K+VRAAGT AKILKEP    
Sbjct: 46  MKEEMLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGK 105

Query: 61  CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 120
           CL++LPSG  K I+++CRATIG VSNPSHGTKKL KAGQSRWLG RP VRGVAMNP DHP
Sbjct: 106 CLIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHP 165

Query: 121 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 160
           HGGGEG+SKSSGS G+ S +PWGKP K GYK+  +K+KK
Sbjct: 166 HGGGEGKSKSSGSRGRTSVSPWGKPCKGGYKSASVKKKK 204

[Close]

BLAST of MC00g0150 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 132.1 bits (331), Expect = 3.9e-31
Identity = 74/151 (49.01%), Postives = 97/151 (64.24%), Query Frame = 0


Query: 9   DINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVRLPSG 68
           ++  ++G+ +PL+ M +GT IHNIE+  G+GG+L RAAG  AK++ +   +   ++LPSG
Sbjct: 119 EVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAK-EGKSATLKLPSG 178

Query: 69  TEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 128
             +LI   C AT+GQV N     K L +AG   WLG+RPVVRGV MNPVDHPHGGGEGR+
Sbjct: 179 EVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRA 238

Query: 129 KSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 160
                  K   TPWG P   G +T   KRKK
Sbjct: 239 PIG---RKKPVTPWGYPA-LGRRT--RKRKK 262

[Close]

BLAST of MC00g0150 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 132.1 bits (331), Expect = 3.9e-31
Identity = 74/151 (49.01%), Postives = 97/151 (64.24%), Query Frame = 0


Query: 9   DINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVRLPSG 68
           ++  ++G+ +PL+ M +GT IHNIE+  G+GG+L RAAG  AK++ +   +   ++LPSG
Sbjct: 119 EVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAK-EGKSATLKLPSG 178

Query: 69  TEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 128
             +LI   C AT+GQV N     K L +AG   WLG+RPVVRGV MNPVDHPHGGGEGR+
Sbjct: 179 EVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRA 238

Query: 129 KSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 160
                  K   TPWG P   G +T   KRKK
Sbjct: 239 PIG---RKKPVTPWGYPA-LGRRT--RKRKK 262

[Close]

BLAST of MC00g0150 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 98.6 bits (244), Expect = 4.8e-21
Identity = 54/120 (45.00%), Postives = 77/120 (64.17%), Query Frame = 0


Query: 11  NSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKIL-KEPTSRYCLVRLPSGT 70
           N  +G+ +PL ++  G +I N+E++ G  G L RA+G  A ++   P S    V+LPSG+
Sbjct: 96  NLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGS 155

Query: 71  EKLIDSRCRATIGQVSNPSHGTKKLRKAGQS--RWLGRR---PVVRGVAMNPVDHPHGGG 125
           +K++ S CRA IGQV+      K L KAG +  ++  +R   PVVRGVAMNPV+HPHGGG
Sbjct: 156 KKILPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGG 215

The following BLAST results are available for this feature:

BLAST of MC00g0150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8K6	3.2e-54	70.55	60S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=...	[more]
Q2F969	3.2e-54	70.55	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 G...	[more]
P92812	3.2e-54	70.55	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
P26859	6.9e-49	66.44	60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2...	[more]
C3P9Q8	1.6e-37	54.73	50S ribosomal protein L2 OS=Bacillus anthracis (strain A0248) OX=592021 GN=rplB ...	[more]

BLAST of MC00g0150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158562.1	1.05e-111	100.00	uncharacterized protein LOC111025017 [Momordica charantia] >XP_022158563.1 uncha...	[more]
XP_022932015.1	1.77e-109	97.48	uncharacterized protein LOC111438344 [Cucurbita moschata]	[more]
XP_023512394.1	1.77e-109	97.48	uncharacterized protein LOC111777160 [Cucurbita pepo subsp. pepo] >KAG6571355.1 ...	[more]
XP_022948169.1	2.29e-108	95.60	uncharacterized protein LOC111451827 isoform X2 [Cucurbita moschata] >XP_0229481...	[more]
XP_023532111.1	2.37e-108	95.60	uncharacterized protein LOC111794372 isoform X2 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of MC00g0150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZS5	5.09e-112	100.00	uncharacterized protein LOC111025017 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1F113	8.55e-110	97.48	uncharacterized protein LOC111438344 OS=Cucurbita moschata OX=3662 GN=LOC1114383...	[more]
A0A6J1G933	1.11e-108	95.60	uncharacterized protein LOC111451827 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I7S9	2.86e-108	96.23	uncharacterized protein LOC111470392 OS=Cucurbita maxima OX=3661 GN=LOC111470392...	[more]
A0A6J1G8M5	9.04e-108	95.60	uncharacterized protein LOC111451827 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MC00g0150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44065.1	1.1e-60	72.33	Ribosomal protein L2 family	[more]
AT2G44065.2	1.1e-60	72.33	Ribosomal protein L2 family	[more]
ATCG00830.1	3.9e-31	49.01	ribosomal protein L2	[more]
ATCG01310.1	3.9e-31	49.01	ribosomal protein L2	[more]
AT3G51190.1	4.8e-21	45.00	Ribosomal protein L2 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 12..145 e-value: 7.4E-73 score: 258.0
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 14..143 e-value: 2.8E-53 score: 179.4
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 3..84 e-value: 2.5E-30 score: 106.1
IPR005880	Ribosomal protein L2, bacterial/organellar-type	TIGRFAM	TIGR01171	TIGR01171	coord: 6..157 e-value: 2.1E-53 score: 179.5
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 85..159 e-value: 1.5E-26 score: 94.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..159
None	No IPR available	PANTHER	PTHR13691:SF5	39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL	coord: 8..158
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 8..158
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 107..118
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 14..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0150.1	MC00g0150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0032543	mitochondrial translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity