MC00g0104 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC00g0104
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
Locationscaffold60: 995347 .. 995436 (-)
RNA-Seq ExpressionMC00g0104
SyntenyMC00g0104
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TACGAGAATATCTCGACGTTGAGTACACAATTAGCAATGAAGTTGGACGATGATGCCATTCCTCGACTTCTCAGATGGTCGTGCACTTAT

mRNA sequence

TACGAGAATATCTCGACGTTGAGTACACAATTAGCAATGAAGTTGGACGATGATGCCATTCCTCGACTTCTCAGATGGTCGTGCACTTAT

Coding sequence (CDS)

TACGAGAATATCTCGACGTTGAGTACACAATTAGCAATGAAGTTGGACGATGATGCCATTCCTCGACTTCTCAGATGGTCGTGCACTTAT

Protein sequence

YENISTLSTQLAMKLDDDAIPRLLRWSCTY
Homology
[Close]
BLAST of MC00g0104 vs. NCBI nr
Match: XP_022136676.1 (uncharacterized protein LOC111008328 [Momordica charantia])

HSP 1 Score: 57.4 bits (137), Expect = 9.81e-09
Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 1  YENISTLSTQLAMKLDDDAIPRLLRWSCTY 30
          YE ISTLST++A++L+DDAIPRLLRWSCTY
Sbjct: 23 YETISTLSTRVALRLNDDAIPRLLRWSCTY 52

[Close]
BLAST of MC00g0104 vs. NCBI nr
Match: XP_022157020.1 (uncharacterized protein LOC111023847 [Momordica charantia])

HSP 1 Score: 57.4 bits (137), Expect = 2.90e-08
Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 1   YENISTLSTQLAMKLDDDAIPRLLRWSCTY 30
           YE ISTLST++A++L+DDAIPRLLRWSCTY
Sbjct: 239 YETISTLSTRVALRLNDDAIPRLLRWSCTY 268

[Close]
BLAST of MC00g0104 vs. NCBI nr
Match: XP_022154965.1 (uncharacterized protein LOC111022110 [Momordica charantia])

HSP 1 Score: 57.4 bits (137), Expect = 3.22e-08
Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 1   YENISTLSTQLAMKLDDDAIPRLLRWSCTY 30
           YE ISTLST++A++L+DDAIPRLLRWSCTY
Sbjct: 80  YETISTLSTRVALRLNDDAIPRLLRWSCTY 109

[Close]
BLAST of MC00g0104 vs. NCBI nr
Match: XP_022156879.1 (putative F-box protein At4g17565 [Momordica charantia])

HSP 1 Score: 52.4 bits (124), Expect = 1.89e-06
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 0 

Query: 1   YENISTLSTQLAMKLDDDAIPRLLRWSCTY 30
           YE ISTLS ++A +L DD IPRLLRWSCTY
Sbjct: 376 YETISTLSVRVATRLSDDVIPRLLRWSCTY 405

[Close]
BLAST of MC00g0104 vs. ExPASy TrEMBL
Match: A0A6J1C463 (uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008328 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.75e-09
Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 1  YENISTLSTQLAMKLDDDAIPRLLRWSCTY 30
          YE ISTLST++A++L+DDAIPRLLRWSCTY
Sbjct: 23 YETISTLSTRVALRLNDDAIPRLLRWSCTY 52

[Close]
BLAST of MC00g0104 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.40e-08
Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 1   YENISTLSTQLAMKLDDDAIPRLLRWSCTY 30
           YE ISTLST++A++L+DDAIPRLLRWSCTY
Sbjct: 239 YETISTLSTRVALRLNDDAIPRLLRWSCTY 268

[Close]
BLAST of MC00g0104 vs. ExPASy TrEMBL
Match: A0A6J1DL40 (uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022110 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.56e-08
Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 1   YENISTLSTQLAMKLDDDAIPRLLRWSCTY 30
           YE ISTLST++A++L+DDAIPRLLRWSCTY
Sbjct: 80  YETISTLSTRVALRLNDDAIPRLLRWSCTY 109

[Close]
BLAST of MC00g0104 vs. ExPASy TrEMBL
Match: A0A6J1DUW8 (putative F-box protein At4g17565 OS=Momordica charantia OX=3673 GN=LOC111023713 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.16e-07
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 0 

Query: 1   YENISTLSTQLAMKLDDDAIPRLLRWSCTY 30
           YE ISTLS ++A +L DD IPRLLRWSCTY
Sbjct: 376 YETISTLSVRVATRLSDDVIPRLLRWSCTY 405

The following BLAST results are available for this feature:
BLAST of MC00g0104 vs.
Match NameE-valueIdentityDescription
BLAST of MC00g0104 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022136676.19.81e-0980.00uncharacterized protein LOC111008328 [Momordica charantia][more]
XP_022157020.12.90e-0880.00uncharacterized protein LOC111023847 [Momordica charantia][more]
XP_022154965.13.22e-0880.00uncharacterized protein LOC111022110 [Momordica charantia][more]
XP_022156879.11.89e-0673.33putative F-box protein At4g17565 [Momordica charantia][more]
BLAST of MC00g0104 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C4634.75e-0980.00uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1DRZ71.40e-0880.00uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DL401.56e-0880.00uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DUW89.16e-0773.33putative F-box protein At4g17565 OS=Momordica charantia OX=3673 GN=LOC111023713 ... [more]
BLAST of MC00g0104 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC00g0104.1MC00g0104.1mRNA