MC00g0046 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC00g0046
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionZinc finger and BTB domain-containing protein 47
Locationscaffold31: 852597 .. 852859 (-)
RNA-Seq ExpressionMC00g0046
SyntenyMC00g0046
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAGAAGATCCAGAAGACGAAAGAGATTGCAGTGGCAATAGCAAAATCCTCCACTTTTAAATCCAATCATGGCGGCACCGAATCGGTACAACGCAGAAAGAGGGGCAGACCTCGCAAGGTTGTGATGAAGCACAAAACGAAGAGAAGAACGAGGAACTTTCGCCGTCGGAAGTTGCAAAAATACCGCTGGAGAAGAAAGTTAAAACCATCGAAGATGAGCAACTGCCGCCGCCCACTGTGGAAGGAAGTGAAAAACAAGAA

mRNA sequence

AAGAAGAAGATCCAGAAGACGAAAGAGATTGCAGTGGCAATAGCAAAATCCTCCACTTTTAAATCCAATCATGGCGGCACCGAATCGGTACAACGCAGAAAGAGGGGCAGACCTCGCAAGGTTGATGAAGCACAAAACGAAGAGAAGAACGAGGAACTTTCGCCGTCGGAAGTTGCAAAAATACCGCTGGAGAAGAAAGTTAAAACCATCGAAGATGAGCAACTGCCGCCGCCCACTGTGGAAGGAAGTGAAAAACAAGAA

Coding sequence (CDS)

AAGAAGAAGATCCAGAAGACGAAAGAGATTGCAGTGGCAATAGCAAAATCCTCCACTTTTAAATCCAATCATGGCGGCACCGAATCGGTACAACGCAGAAAGAGGGGCAGACCTCGCAAGGTTGATGAAGCACAAAACGAAGAGAAGAACGAGGAACTTTCGCCGTCGGAAGTTGCAAAAATACCGCTGGAGAAGAAAGTTAAAACCATCGAAGATGAGCAACTGCCGCCGCCCACTGTGGAAGGAAGTGAAAAACAAGAA

Protein sequence

KKKIQKTKEIAVAIAKSSTFKSNHGGTESVQRRKRGRPRKVDEAQNEEKNEELSPSEVAKIPLEKKVKTIEDEQLPPPTVEGSEKQE
Homology
BLAST of MC00g0046 vs. NCBI nr
Match: KAA0065239.1 (zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 1.38e-13
Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 0

Query: 1  KKKIQKTKEIAVAIAKSSTFK-SNHGGTESVQRRKRGRPRKV-DEAQNEEKNEELSPS-- 60
          KKK QKTKEIAVAIA++ST K ++ G  +S+Q RKRGRPRKV DE QNE++N++L P   
Sbjct: 3  KKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDEQQNEQENKKLPPPPP 62

Query: 61 ---EVAKIPLEKKVKTIEDEQLPPPTVEGSEKQE 87
             EV + P EKK+K   DE  P    EGS+++E
Sbjct: 63 LLPEVEENPPEKKIKATVDEPPPGSVKEGSKQEE 96

BLAST of MC00g0046 vs. NCBI nr
Match: KAG7020516.1 (hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 68.6 bits (166), Expect = 1.57e-12
Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 0

Query: 1  KKKIQKTKEIAVAIAKSSTFK-----SNHGGTESVQRRKRGRPRKVDEAQNEEKNEELSP 60
          KKK QKTK+I+VAIA++ST K       HGG +SVQ RKRGRPRKV +   ++K     P
Sbjct: 3  KKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKKLPPPP 62

Query: 61 SEVAKIPLEKKVKTIEDEQLPPPTVEGSEKQ 86
          ++VA  PL+KK K+  DE  PP ++EG+ KQ
Sbjct: 63 ADVADKPLQKKGKSTGDE--PPDSMEGASKQ 91

BLAST of MC00g0046 vs. NCBI nr
Match: XP_038884964.1 (uncharacterized protein LOC120075548 [Benincasa hispida])

HSP 1 Score: 67.4 bits (163), Expect = 4.15e-12
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 0

Query: 1  KKKIQKTKEIAVAIAKSSTFK-SNHGGTESVQRRKRGRPRKV-DEAQNEEKNEELSPS-- 60
          KKK QKTKEIAVAIA++S  K ++ G  +S+Q RKRGRPRKV DE QN+++N++L P   
Sbjct: 3  KKKPQKTKEIAVAIAETSASKLADDGIGQSIQPRKRGRPRKVLDEPQNKQENKKLLPPLP 62

Query: 61 EVAKIPLEKKVKTIEDEQLPPPTVEGSEKQ 86
          EVA+ P EKK KT  D Q PP ++E   KQ
Sbjct: 63 EVAENPPEKKAKTTVD-QPPPGSMEEGSKQ 91

BLAST of MC00g0046 vs. NCBI nr
Match: XP_023537340.1 (uncharacterized protein LOC111798433 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 67.4 bits (163), Expect = 4.57e-12
Identity = 49/92 (53.26%), Postives = 63/92 (68.48%), Query Frame = 0

Query: 1  KKKIQKTKEIAVAIAKSSTFK-----SNHGGTESVQRRKRGRPRKV-DEAQNEEKNEELS 60
          KKK QKTK+I+VAIA+ ST K       HGG +SVQ RKRGRPRKV DE  +++K     
Sbjct: 3  KKKTQKTKQISVAIAEISTSKLPDDGGGHGGGQSVQPRKRGRPRKVLDEPPDDKKLLPPP 62

Query: 61 PSEVAKIPLEKKVKTIEDEQLPPPTVEGSEKQ 86
          P++VA  PL+KK K+  DE  PP ++EG+ KQ
Sbjct: 63 PADVADKPLQKKGKSTGDE--PPISMEGASKQ 92

BLAST of MC00g0046 vs. NCBI nr
Match: XP_023002541.1 (uncharacterized protein LOC111496353 [Cucurbita maxima])

HSP 1 Score: 65.1 bits (157), Expect = 7.41e-11
Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0

Query: 1   KKKIQKTKEIAVAIAKSSTFK-----SNHGGTESVQRRKRGRPRKV-DEAQNEEKNEELS 60
           KKK QKTK+I+VAIA++ST K       HGG +S Q RKRGRPRKV DE  +++K     
Sbjct: 35  KKKTQKTKQISVAIAETSTSKLPDDGGGHGGGQSEQPRKRGRPRKVLDEPPDDKKLLPPP 94

Query: 61  PSEVAKIPLEKKVKTIEDEQLPPPTVEGSEKQE 87
            ++VA  PL+KK KT  DE  PP ++EG+ KQ+
Sbjct: 95  AADVADKPLQKKGKTTGDE--PPISMEGASKQQ 125

BLAST of MC00g0046 vs. ExPASy TrEMBL
Match: A0A5A7VIE6 (Zinc finger and BTB domain-containing protein 47 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005800 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.69e-14
Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 0

Query: 1  KKKIQKTKEIAVAIAKSSTFK-SNHGGTESVQRRKRGRPRKV-DEAQNEEKNEELSPS-- 60
          KKK QKTKEIAVAIA++ST K ++ G  +S+Q RKRGRPRKV DE QNE++N++L P   
Sbjct: 3  KKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDEQQNEQENKKLPPPPP 62

Query: 61 ---EVAKIPLEKKVKTIEDEQLPPPTVEGSEKQE 87
             EV + P EKK+K   DE  P    EGS+++E
Sbjct: 63 LLPEVEENPPEKKIKATVDEPPPGSVKEGSKQEE 96

BLAST of MC00g0046 vs. ExPASy TrEMBL
Match: A0A6J1KLK8 (uncharacterized protein LOC111496353 OS=Cucurbita maxima OX=3661 GN=LOC111496353 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.59e-11
Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0

Query: 1   KKKIQKTKEIAVAIAKSSTFK-----SNHGGTESVQRRKRGRPRKV-DEAQNEEKNEELS 60
           KKK QKTK+I+VAIA++ST K       HGG +S Q RKRGRPRKV DE  +++K     
Sbjct: 35  KKKTQKTKQISVAIAETSTSKLPDDGGGHGGGQSEQPRKRGRPRKVLDEPPDDKKLLPPP 94

Query: 61  PSEVAKIPLEKKVKTIEDEQLPPPTVEGSEKQE 87
            ++VA  PL+KK KT  DE  PP ++EG+ KQ+
Sbjct: 95  AADVADKPLQKKGKTTGDE--PPISMEGASKQQ 125

BLAST of MC00g0046 vs. ExPASy TrEMBL
Match: A0A0A0LRH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361610 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.33e-10
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 0

Query: 1  KKKIQKTKEIAVAIAKSSTFKSNHGGT--ESVQRRKRGRPRKV-DEAQNEEKNEELSPS- 60
          KKK QKTKEIAVAIA++ST K    G   + +Q RKRGRPRKV +E QNE+++++  P  
Sbjct: 3  KKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPPPL 62

Query: 61 -EVAKIPLEKKVKTIEDEQLPPPTVEGSEKQE 87
           EVA+ P EKK+K   DE      +EGS+++E
Sbjct: 63 LEVAENPPEKKIKGTVDEAALGSMIEGSKEEE 94

BLAST of MC00g0046 vs. ExPASy TrEMBL
Match: A0A061FBR0 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_034035 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.54e-04
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 0

Query: 2  KKIQKTKEIAVAIAKSSTFKSNHGGTESVQ---------RRKRGRPRK-VDEAQNEEKNE 61
          KK QKTKE++VAIA++ST     GG E VQ         RRKRGRPRK V++++ E + E
Sbjct: 3  KKPQKTKELSVAIAEASTG----GGGEEVQQQTQPQAQPRRKRGRPRKHVEKSETETETE 62

Query: 62 ELSPSEVAKIP--LEKKVKTIEDEQLPPPTVEGSEKQE 87
          E    E A++     KKVK   +EQ      E  E++E
Sbjct: 63 ERKEEEAAEVSENQSKKVKVSVEEQQQKEEEEEEEEEE 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0065239.11.38e-1354.26zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa][more]
KAG7020516.11.57e-1251.65hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038884964.14.15e-1256.67uncharacterized protein LOC120075548 [Benincasa hispida][more]
XP_023537340.14.57e-1253.26uncharacterized protein LOC111798433 [Cucurbita pepo subsp. pepo][more]
XP_023002541.17.41e-1151.61uncharacterized protein LOC111496353 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A5A7VIE66.69e-1454.26Zinc finger and BTB domain-containing protein 47 OS=Cucumis melo var. makuwa OX=... [more]
A0A6J1KLK83.59e-1151.61uncharacterized protein LOC111496353 OS=Cucurbita maxima OX=3661 GN=LOC111496353... [more]
A0A0A0LRH21.33e-1051.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361610 PE=4 SV=1[more]
A0A061FBR07.54e-0442.86Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_034035 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC00g0046.1MC00g0046.1mRNA