MC00g0028 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0028
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Tropomyosin-like
Location	scaffold31: 473295 .. 477358 (-)
RNA-Seq Expression	MC00g0028
Synteny	MC00g0028

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGACAAGGGTAAAGGAACGGACAGATGGAGCGGTGCTGTAGCCAATCTCACAGAGATGGCTTCCAATTTGGAATCACTCCAGAAGCTTCTACTGAAGAAAGCCGTATATGTGGACGACGAGACGTTTGCCAAAGCTTCGTTGTGCTCCGAACAAGCAAGAACGATCAAGGTTACTTGACGCGATCATGCTTTTTCTTGTTTTGTAGTTAGGTATTGTTCTGATATCTGGTTTGGAATTTCTATTTTACCATTTGAAATTGGGGGGACTGAGGGATTGGTGGGATTTCTGGAGGGCATTATCGAATGGCCCTCGTATGACCAATGTAAATGTTATTTTTGAATGCTATATACAGAATCGGAGGGGTTTTTGGCTCGCTCGGGGTTTTCTGGTTTTTGTAGTTAGGTACTGTTCTGATATATGGTTTGAAATTTCAACTTTTCTATGTAAATTGGAAATTGGGGGGTTACTCTTCGATGAGATCCAATCCTGTCAAGCGGCCATTTGGAAGGTGGAGTCTTGGAAGAACAAGGAGGTACATGTACACCTGATCTTCGAAGACCTTAATATTTTGAAGAATTTCTTGGAGAAATGGAAGCACTGTGTAGATTTGAGAACTTTCTCCAAAGGGGAGTGGAAGGAGACTGCTAGTGTCCAGGTAAGAGGTGACGAATGTACTCTTTGGGCGTGGAAAATTCAAGGATAAGTTAAACGTTCAGTTTGTCCTTTACGAACCAAATAGGAGAGCTTGTGGAGCATTGAGAAAGTTATAGCACTACAACTCCATTTATGAATATGTGGTTGAGTTTACAAATGTTGATGCTATGCTAGAGATCAAGATAGTGTTGCAGGATGACACTACTTCATTCTTTTATAATTTAGGTATGGAGGTCAGGCCTCACTCCTTTCATTATGCTTATAGCCCACTACATTAATTTCCAGGGACGATTTTCTCAAGGCCAGTGCTGGGAGATTAAAGGTTTGAAATTATAAGTTTTCCACTTGAAAGCTTGAACCTAGAATCTTGGAGGGTATCTCCAAACATCTCAACTCCGGACCACTAGGACACCCTTGGGGTCGAGTACTCCAATTTAATTATAGGGTTTCTACCTCAGGCAAGCAGAAGCTTAGATAAAATGTCAACTGCATGGAACATAGAGTAACCTATGGGAGTAGAAAATGGGTTGGTGTGGACCATGGAACCTCTTAATGGAACAGAGAACAGGAAGATGCATGTGGTAGTGCTTTCTCACTCAAGAGAGTAAGAGGTAAAATGTGCCTCATCTATGGTTTATGACTCCCAGATGCCACTTAGCAACTCATCTCATTGCCTAAGAGTGAAGAATGTGTATGAATGAATAAGGGCATGCTACTAGTTACCACGTGGGGCCCAGGGGAGGAGCCCATGAGTCACATTAATTGTCTTCTGATAGAAAGGATTTGGGATAGCTGTTCATCTCTTCCTCCTTTGTTTGTTCACATAAGGGGTTCGGATCCCGATTTTTGACATCTAATTGTTGGCTACTTTACGCTCCCAAGGAGCAGCCCAAATGGCAAGGGCTTGGTCTCTCTTGGTCATACTGGCTGAGACCTTCAGGTTAGAACCTTCTAATGAGCTTAATACCAAAAACCCTTGATGTCTCCCGAGTCCGGACTTTGGGGCGGGCGTGGGTGCCCTTGGGTATAGGGGAGCAAAGCTCCGACTCCCAATTATAAAAAAAAAAAAAAATTGTTGGCTACTTTATTGTTGGCTTCTGAACATGTTCCATTTTGCTTTTACCAATCTTCTTTCTACCATTTAGATTGTAATGATCTGGGAAATCATTGTTTTTACATCACACCCCACCATATTATAGATGATAAATCAAGGATCATATTACATGATCTTAATTGATTCTCCTTTTTGAAATTACATGCTGTTCGGTTTTTTGGTTTGTTGCTGATGTGTGATAAAGTTGTGCCAACTGGTTATGATAACCAAAGAATCTTTTGCTAGGTTCTCGAACAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTGCCATCACTGCTGCTGCTCATGCTCGTTCAGAAAAACGTCAGGCTGAGGCAGCTCAAAAGGCTGCTGAACTACATGTGAAGGAGGTCACTAGAGAGCTCGAGAACACCACAAGTATGGAATATCTTACCCTTTCCCATCTTTTAATTGTCTCAACCTTAGGTCTTTTTAATTTCTAAAAGGAGTATTTATTGAAGCACGAGGTTTTGTAGACTGGCTGTACTCAAACTTTCCCAAGTTCAGAAAGATTTAAATATTATTCTTCCACATTTTATTAGCATAATTTTCTTATGCATGCAGACATTTTATGCTGACTAACATAATCAATCTGGTGAATTAAATATACTCTTCTTTTTTTTTTTTTTTTGGGGATAAGAAACATACTCATCTATTTGCAAGGAACTTATTTTTGAGATAGGAGACTACAGATAGAAGCCTAGGAATGTACAATAAGATAGATTGCTTATAAAATCTACGTTGGCAGGATACATTTTAATTGGCTCTTAATTCTTCAACAATTCTGTGCACCAGTATCTTTATAATAAATAGGAGTGGAATTATGATGTTAGGAACTTGATAACTTAATTGCGGTAAGAATGAGACTACTAGCTATAATGAAACTGCTGGATACTCCTGAAAATTTTACTATAGCTTTCTTCTTCTCTATTACACTTGAAATCAGCAGTTTTACAGACAACTATTTGCCCCTGATAGTATGTGGGGGGCTGGTTGTGATGTATCAGATCCTTGTGGTTGGAAACGACATTGTGATATATATAAATGTTATCAATTCTGGATTTCATAAACGTCTTTGAGTCATTTTTTTCTTATTACACGCTTCTAAAATTGTATCCGGGGTTACCTGTTCTTGGAAATTTTTCAAATTTGGATTTCTATTTTCCTTCTTAGAACCCGCCAATATTAAGCAAACAAACAAAGTATTTAGGTCCAATGTCTCATTTCATTTTGTTATTTTTCAATGGGAAACGAACTATTATTTAAGATAAATAAGTACTGTCTCATTTCTTTGCATTAGTTTGTAAGAAAGCACTCAATCTTCTGCAGAAAAGAATAAGCAGAGGTTTTAGTTTAGTAGGCTGTTATTTTAAGTTGTGGTTGAAGTCGATCTCCACCTCATATTGATGATTCTTGCTGCATTATGATGGAATCAGTTTTGTTATATTTACATATCACTAAAATTCATTATTTTCTTGTAATAACCAATCATTACAGCTAAGGGCTAAATATTTTATAAGGTAACCTTTAAAGAGTGAAATTATTACCTGTTTTCTTAACATTATCCATTTTGTTATAATTTGGAGAAATTTGAGATAATTTTCCTATATTTTTTATTTGGATGATCTTTGGTGTATGTTAATTATACAGGTACGGAGAACCATCATGGTTTGGTCTGGTGGTCAATAAGGGTCAATGTAAATAGTAAATAGTAAAGGGCTTCTAGGGATGAGTCCAAACCATGGTGGCCACCTACCTAGGGTGTAATATCCTATGAGTTACCTTGGAAACAAATGTAGTTGGGTCATACGGTTGTTTTGTGAAATTAGTCAGTCAAGGTACGCGCAAGCTGATATGAGCACTCACGGATATAAGAAAAAAGAAAATATATAGGTAGGGAGGTTATCTTGGAGTTATTCTTAGTCTCATATGAAGACATCTAACTTTTATGGAGGTGCGATAACATAAAAACAAAATTTAAAATTCAAATGGAAACTGAGATTTCAATGCAAGAAATTTATTAAATTGGCAATCATTGTTCTTCAGTGGCACTGTACCATAAGAAATCTCCACAAGGAAATAGGTGTTCTTTAAAATTGCTCTGTTAAAGTTGAAGTTAAAGTTGATACTGCAGAGGTTTGGTTGTGGACTAAAAATAGGTTATTGATTGCTATTGTTGCAGAGGTATTTCAACTGCATATGGATGAATTGCGGGCAAAGCAAGAGGAAATTGACAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAGACTCTTGGT

mRNA sequence

ATGGAGGACAAGGGTAAAGGAACGGACAGATGGAGCGGTGCTGTAGCCAATCTCACAGAGATGGCTTCCAATTTGGAATCACTCCAGAAGCTTCTACTGAAGAAAGCCGTATATGTGGACGACGAGACGTTTGCCAAAGCTTCGTTGTGCTCCGAACAAGCAAGAACGATCAAGGTTCTCGAACAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTGCCATCACTGCTGCTGCTCATGCTCGTTCAGAAAAACGTCAGGCTGAGGCAGCTCAAAAGGCTGCTGAACTACATGTGAAGGAGGTCACTAGAGAGCTCGAGAACACCACAAAGGTATTTCAACTGCATATGGATGAATTGCGGGCAAAGCAAGAGGAAATTGACAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAGACTCTTGGT

Coding sequence (CDS)

ATGGAGGACAAGGGTAAAGGAACGGACAGATGGAGCGGTGCTGTAGCCAATCTCACAGAGATGGCTTCCAATTTGGAATCACTCCAGAAGCTTCTACTGAAGAAAGCCGTATATGTGGACGACGAGACGTTTGCCAAAGCTTCGTTGTGCTCCGAACAAGCAAGAACGATCAAGGTTCTCGAACAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTGCCATCACTGCTGCTGCTCATGCTCGTTCAGAAAAACGTCAGGCTGAGGCAGCTCAAAAGGCTGCTGAACTACATGTGAAGGAGGTCACTAGAGAGCTCGAGAACACCACAAAGGTATTTCAACTGCATATGGATGAATTGCGGGCAAAGCAAGAGGAAATTGACAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAGACTCTTGGT

Protein sequence

MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLG

Homology

[Close]

BLAST of MC00g0028 vs. NCBI nr
Match: XP_022142007.1 (uncharacterized protein LOC111012242 [Momordica charantia])

HSP 1 Score: 263 bits (672), Expect = 4.29e-88
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60
           MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL
Sbjct: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60

Query: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120
           EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL
Sbjct: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120

Query: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145
           RAKQEEIDKRDKDIKLLEAIIQTLG
Sbjct: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145

[Close]

BLAST of MC00g0028 vs. NCBI nr
Match: XP_038886855.1 (uncharacterized protein LOC120077075 isoform X1 [Benincasa hispida])

HSP 1 Score: 256 bits (655), Expect = 1.68e-85
Identity = 140/145 (96.55%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60
           MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFA+ASLCS+QARTIKVL
Sbjct: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFARASLCSQQARTIKVL 60

Query: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120
           EQRVETLERELDAAITAAAHARSEKRQAEAAQ+AAELHV+EVTRELENTTKVFQLHMDEL
Sbjct: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQRAAELHVQEVTRELENTTKVFQLHMDEL 120

Query: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145
           R KQEEIDKRDKDIKLLEAIIQTLG
Sbjct: 121 RTKQEEIDKRDKDIKLLEAIIQTLG 145

[Close]

BLAST of MC00g0028 vs. NCBI nr
Match: XP_022963476.1 (uncharacterized protein LOC111463800 isoform X2 [Cucurbita moschata] >XP_023511738.1 uncharacterized protein LOC111776508 isoform X2 [Cucurbita pepo subsp. pepo] >KAG7011406.1 hypothetical protein SDJN02_26311 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256 bits (653), Expect = 3.16e-85
Identity = 139/145 (95.86%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60
           MEDKGKGTDRWSGAVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQARTIKVL
Sbjct: 1   MEDKGKGTDRWSGAVANITEMASNLESLQKILVKKAVYVDDETFARASLCSEQARTIKVL 60

Query: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120
           EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+EVTRELENTTKVFQLHMDEL
Sbjct: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQEVTRELENTTKVFQLHMDEL 120

Query: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145
           RAKQEEI+KRDKDIKLLEAIIQTLG
Sbjct: 121 RAKQEEINKRDKDIKLLEAIIQTLG 145

[Close]

BLAST of MC00g0028 vs. NCBI nr
Match: XP_022963475.1 (uncharacterized protein LOC111463800 isoform X1 [Cucurbita moschata] >XP_023511737.1 uncharacterized protein LOC111776508 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256 bits (653), Expect = 3.38e-85
Identity = 139/145 (95.86%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60
           MEDKGKGTDRWSGAVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQARTIKVL
Sbjct: 1   MEDKGKGTDRWSGAVANITEMASNLESLQKILVKKAVYVDDETFARASLCSEQARTIKVL 60

Query: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120
           EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+EVTRELENTTKVFQLHMDEL
Sbjct: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQEVTRELENTTKVFQLHMDEL 120

Query: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145
           RAKQEEI+KRDKDIKLLEAIIQTLG
Sbjct: 121 RAKQEEINKRDKDIKLLEAIIQTLG 145

[Close]

BLAST of MC00g0028 vs. NCBI nr
Match: XP_022967635.1 (uncharacterized protein LOC111467076 isoform X2 [Cucurbita maxima])

HSP 1 Score: 253 bits (646), Expect = 3.69e-84
Identity = 138/145 (95.17%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60
           MEDKGKGTDRWS AVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQARTIKVL
Sbjct: 1   MEDKGKGTDRWSDAVANITEMASNLESLQKILVKKAVYVDDETFARASLCSEQARTIKVL 60

Query: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120
           EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+EVTRELENTTKVFQLHMDEL
Sbjct: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQEVTRELENTTKVFQLHMDEL 120

Query: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145
           RAKQEEI+KRDKDIKLLEAIIQTLG
Sbjct: 121 RAKQEEINKRDKDIKLLEAIIQTLG 145

[Close]

BLAST of MC00g0028 vs. ExPASy TrEMBL
Match: A0A6J1CLE5 (uncharacterized protein LOC111012242 OS=Momordica charantia OX=3673 GN=LOC111012242 PE=4 SV=1)

HSP 1 Score: 263 bits (672), Expect = 2.08e-88
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60
           MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL
Sbjct: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60

Query: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120
           EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL
Sbjct: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120

Query: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145
           RAKQEEIDKRDKDIKLLEAIIQTLG
Sbjct: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145

[Close]

BLAST of MC00g0028 vs. ExPASy TrEMBL
Match: A0A6J1HG82 (uncharacterized protein LOC111463800 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463800 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 1.53e-85
Identity = 139/145 (95.86%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60
           MEDKGKGTDRWSGAVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQARTIKVL
Sbjct: 1   MEDKGKGTDRWSGAVANITEMASNLESLQKILVKKAVYVDDETFARASLCSEQARTIKVL 60

Query: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120
           EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+EVTRELENTTKVFQLHMDEL
Sbjct: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQEVTRELENTTKVFQLHMDEL 120

Query: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145
           RAKQEEI+KRDKDIKLLEAIIQTLG
Sbjct: 121 RAKQEEINKRDKDIKLLEAIIQTLG 145

[Close]

BLAST of MC00g0028 vs. ExPASy TrEMBL
Match: A0A6J1HI40 (uncharacterized protein LOC111463800 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463800 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 1.64e-85
Identity = 139/145 (95.86%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60
           MEDKGKGTDRWSGAVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQARTIKVL
Sbjct: 1   MEDKGKGTDRWSGAVANITEMASNLESLQKILVKKAVYVDDETFARASLCSEQARTIKVL 60

Query: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120
           EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+EVTRELENTTKVFQLHMDEL
Sbjct: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQEVTRELENTTKVFQLHMDEL 120

Query: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145
           RAKQEEI+KRDKDIKLLEAIIQTLG
Sbjct: 121 RAKQEEINKRDKDIKLLEAIIQTLG 145

[Close]

BLAST of MC00g0028 vs. ExPASy TrEMBL
Match: A0A6J1HV17 (uncharacterized protein LOC111467076 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467076 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 1.79e-84
Identity = 138/145 (95.17%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60
           MEDKGKGTDRWS AVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQARTIKVL
Sbjct: 1   MEDKGKGTDRWSDAVANITEMASNLESLQKILVKKAVYVDDETFARASLCSEQARTIKVL 60

Query: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120
           EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+EVTRELENTTKVFQLHMDEL
Sbjct: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQEVTRELENTTKVFQLHMDEL 120

Query: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145
           RAKQEEI+KRDKDIKLLEAIIQTLG
Sbjct: 121 RAKQEEINKRDKDIKLLEAIIQTLG 145

[Close]

BLAST of MC00g0028 vs. ExPASy TrEMBL
Match: A0A6J1HXA5 (uncharacterized protein LOC111467076 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467076 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 1.91e-84
Identity = 138/145 (95.17%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKVL 60
           MEDKGKGTDRWS AVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQARTIKVL
Sbjct: 1   MEDKGKGTDRWSDAVANITEMASNLESLQKILVKKAVYVDDETFARASLCSEQARTIKVL 60

Query: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDEL 120
           EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+EVTRELENTTKVFQLHMDEL
Sbjct: 61  EQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVQEVTRELENTTKVFQLHMDEL 120

Query: 121 RAKQEEIDKRDKDIKLLEAIIQTLG 145
           RAKQEEI+KRDKDIKLLEAIIQTLG
Sbjct: 121 RAKQEEINKRDKDIKLLEAIIQTLG 145

[Close]

BLAST of MC00g0028 vs. TAIR 10
Match: AT5G64180.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 201.8 bits (512), Expect = 3.7e-52
Identity = 110/146 (75.34%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MEDKGKGTD-RWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARTIKV 60
           ME++  G+D RW G++ N+TEMASNL+SLQKLLLKKAV+V+++TF++ASL SEQARTIKV
Sbjct: 1   MEEQFGGSDERWKGSLENITEMASNLDSLQKLLLKKAVFVEEDTFSRASLVSEQARTIKV 60

Query: 61  LEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTTKVFQLHMDE 120
           LEQRV+TLERELDAAITAAAHARSEKRQAE++QKAAE   ++VT+ELENTTKVF+LHM+E
Sbjct: 61  LEQRVQTLERELDAAITAAAHARSEKRQAESSQKAAESRAQDVTKELENTTKVFKLHMEE 120

Query: 121 LRAKQEEIDKRDKDIKLLEAIIQTLG 146
           LR  QE+I KRD +IKLLEAIIQTLG
Sbjct: 121 LRGMQEQISKRDNEIKLLEAIIQTLG 146

The following BLAST results are available for this feature:

BLAST of MC00g0028 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g0028 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142007.1	4.29e-88	100.00	uncharacterized protein LOC111012242 [Momordica charantia]	[more]
XP_038886855.1	1.68e-85	96.55	uncharacterized protein LOC120077075 isoform X1 [Benincasa hispida]	[more]
XP_022963476.1	3.16e-85	95.86	uncharacterized protein LOC111463800 isoform X2 [Cucurbita moschata] >XP_0235117...	[more]
XP_022963475.1	3.38e-85	95.86	uncharacterized protein LOC111463800 isoform X1 [Cucurbita moschata] >XP_0235117...	[more]
XP_022967635.1	3.69e-84	95.17	uncharacterized protein LOC111467076 isoform X2 [Cucurbita maxima]	[more]

BLAST of MC00g0028 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLE5	2.08e-88	100.00	uncharacterized protein LOC111012242 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1HG82	1.53e-85	95.86	uncharacterized protein LOC111463800 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HI40	1.64e-85	95.86	uncharacterized protein LOC111463800 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HV17	1.79e-84	95.17	uncharacterized protein LOC111467076 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HXA5	1.91e-84	95.17	uncharacterized protein LOC111467076 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MC00g0028 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64180.1	3.7e-52	75.34	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..105
None	No IPR available	PANTHER	PTHR36080	DBJ\|BAA96220.1	coord: 4..145
None	No IPR available	PANTHER	PTHR36080:SF1	DBJ\|BAA96220.1	coord: 4..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0028.1	MC00g0028.1	mRNA