MC00g0024 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0024
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	copper-transporting ATPase PAA1, chloroplastic-like
Location	scaffold31: 420085 .. 421311 (+)
RNA-Seq Expression	MC00g0024
Synteny	MC00g0024

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCGCCATCTCTCTAATTGCCTCCAATCTGCCTCTCTCCTCCCTCAATTTCCGCTTCTCCGGACCTAATTTCACCCATTTCACCTGCATTTCGCCTATCTCTGCCATTCACTCGCCCACCGTTCCGCTGCGTGCCGCTGTTCCTCCCCTCCACCGTCGTTTTAAATTCGTCTCCAAATTTGCTTCTGGCAACGGAAATGGCGGCGTTCGAGATGAGAGCGGCGGCGGTGGGGATGACGGTGGGCCTGACGGTGGCGATGCCGAGTCCAAATTGCTTGCGGAAGAAGCTGAGGGCGATGCGACGCTGTCCGCAGACGTCATTGTTCTGGATGTTGGAGTACGAGACGGGTTATCTCCCTTTTCAGTTTTCGACTACTAATTTCCTTTCTTCGCTTTCATTTGATCGATTTCATGCTGTTTATAATAGGGAATGACATGCATGGGGTGTTCGGCAAGTGTCAAGAGGATTCTTGAAAGTCAGGTGTGGTTAACTTATACTTTCTCTCCGTCCTGTATGTTTCATTTGTTAGTGATTTTGCTTATCCCTAAATGTTTGAGTCGCTGATTGAAATGAATATGTAGAAACTCTGTACGAGCTGATTCTTTTTCTTATCCTATAAACTTATTTGATTCATATCTAAGAATCAGAGATTGAAGGGGGAAGGATACAGGGTATCACTATAAGTTCATTTTCAGTATAGGAAATGAATTTGTTCAATTTCTAATCCTCCAGGATTGGCGTTAAAAAGAAAGAATATGGATAAAAATTAAATTTAACATCATTTAAGTTCTTAAGATTCAGTGATGGTTTAACATGGAATTAGAGCAGATGTGTTCTAAAACCCCTGCAATTTCATTTCTAACCGATTAGTATTGATGGCTACTTGGTAGATATGGTGTCACAAACCCACCATATTTAAATTATATCAAATATTATAGTTTCTATAACTAATTAGCATATTGTTTTTGGATTAGTGGAGATTTAACAATTGGAAATAATAAGTTGAGGAAATTATTTTGCCTTGTGAACAAATCTTCATTGTTCTTCTCTTTACATTATGGACAGCCACAAGTGTCACAAGCTAGTGTTGACCTTGCTTCGGAGACAGCAGTCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTGGGAGAGGCACTTGCCAAGCATTTGACTACTTGTGGTTTTTCGTCTAAGGTTCAAGGT

mRNA sequence

ATGGATTCCGCCATCTCTCTAATTGCCTCCAATCTGCCTCTCTCCTCCCTCAATTTCCGCTTCTCCGGACCTAATTTCACCCATTTCACCTGCATTTCGCCTATCTCTGCCATTCACTCGCCCACCGTTCCGCTGCGTGCCGCTGTTCCTCCCCTCCACCGTCGTTTTAAATTCGTCTCCAAATTTGCTTCTGGCAACGGAAATGGCGGCGTTCGAGATGAGAGCGGCGGCGGTGGGGATGACGGTGGGCCTGACGGTGGCGATGCCGAGTCCAAATTGCTTGCGGAAGAAGCTGAGGGCGATGCGACGCTGTCCGCAGACGTCATTGTTCTGGATGTTGGAGGAATGACATGCATGGGGTGTTCGGCAAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACAAGCTAGTGTTGACCTTGCTTCGGAGACAGCAGTCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTGGGAGAGGCACTTGCCAAGCATTTGACTACTTGTGGTTTTTCGTCTAAGGTTCAAGGT

Coding sequence (CDS)

ATGGATTCCGCCATCTCTCTAATTGCCTCCAATCTGCCTCTCTCCTCCCTCAATTTCCGCTTCTCCGGACCTAATTTCACCCATTTCACCTGCATTTCGCCTATCTCTGCCATTCACTCGCCCACCGTTCCGCTGCGTGCCGCTGTTCCTCCCCTCCACCGTCGTTTTAAATTCGTCTCCAAATTTGCTTCTGGCAACGGAAATGGCGGCGTTCGAGATGAGAGCGGCGGCGGTGGGGATGACGGTGGGCCTGACGGTGGCGATGCCGAGTCCAAATTGCTTGCGGAAGAAGCTGAGGGCGATGCGACGCTGTCCGCAGACGTCATTGTTCTGGATGTTGGAGGAATGACATGCATGGGGTGTTCGGCAAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACAAGCTAGTGTTGACCTTGCTTCGGAGACAGCAGTCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTGGGAGAGGCACTTGCCAAGCATTTGACTACTTGTGGTTTTTCGTCTAAGGTTCAAGGT

Protein sequence

MDSAISLIASNLPLSSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFKFVSKFASGNGNGGVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG

Homology

[Close]

BLAST of MC00g0024 vs. ExPASy Swiss-Prot
Match: Q9SZC9 (Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-31
Identity = 88/171 (51.46%), Postives = 110/171 (64.33%), Query Frame = 0


Query: 21  FSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRR-----------FKFVSKFASGNGNG 80
           F G  FT     S  SA+ S    L AAV P+ R            F+ +S    G+G G
Sbjct: 62  FHGSRFT-----SSNSALRS----LGAAVLPVIRHRLECLSSSSPSFRSISS-GGGSGFG 121

Query: 81  GVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRIL 140
           G    SGGGG  GG + GD++SKL A  ++G +  S+D+I+LDVGGMTC GCSASVK+IL
Sbjct: 122 GYNGGSGGGG-GGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKIL 181

Query: 141 ESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSS 181
           ESQPQV+ ASV+L +ETA+VWPV EAK  P+W++ LGE LA HLT CGF S
Sbjct: 182 ESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of MC00g0024 vs. ExPASy Swiss-Prot
Match: B9DFX7 (Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.7e-06
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 109 IVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEA 168
           I+LDV GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T     +  E+
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVT----ADTAES 137

Query: 169 LAKHLTTCGFSSK 182
           LAK LT  GF +K
Sbjct: 138 LAKRLTESGFEAK 146

[Close]

BLAST of MC00g0024 vs. NCBI nr
Match: XP_022142006.1 (copper-transporting ATPase PAA1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 360 bits (923), Expect = 5.57e-125
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MDSAISLIASNLPLSSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFKFVS 60
           MDSAISLIASNLPLSSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFKFVS
Sbjct: 1   MDSAISLIASNLPLSSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFKFVS 60

Query: 61  KFASGNGNGGVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMG 120
           KFASGNGNGGVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMG
Sbjct: 61  KFASGNGNGGVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMG 120

Query: 121 CSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSS 180
           CSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSS
Sbjct: 121 CSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSS 180

Query: 181 KVQG 184
           KVQG
Sbjct: 181 KVQG 184

[Close]

BLAST of MC00g0024 vs. NCBI nr
Match: XP_038887264.1 (copper-transporting ATPase PAA1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 268 bits (684), Expect = 1.56e-88
Identity = 147/189 (77.78%), Postives = 160/189 (84.66%), Query Frame = 0


Query: 1   MDSAISLIASNLPLSSLNF---RFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFK 60
           MDSAISL+ASN PLS+L+     FS  NFTH T ISPIS +   +  LRA++PPLHRR K
Sbjct: 1   MDSAISLMASNAPLSTLSTISRSFSSLNFTHPTSISPISTL---SFSLRASLPPLHRRQK 60

Query: 61  FVSKFASGNGNGGVRDESGGGG--DDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGG 120
           F+S F+SGNGNGGVR E+GGGG  DDGGPDG D +SKLLA EA+ DATLSADVIVL VGG
Sbjct: 61  FISNFSSGNGNGGVRGENGGGGGGDDGGPDGADVDSKLLAGEADDDATLSADVIVLGVGG 120

Query: 121 MTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTT 180
           MTC GCSASVKRILESQPQVS ASVDLASETA+VWPVAEAKITPNWREELG ALAKHLTT
Sbjct: 121 MTCKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTT 180

Query: 181 CGFSSKVQG 184
           CGFSSKVQG
Sbjct: 181 CGFSSKVQG 186

[Close]

BLAST of MC00g0024 vs. NCBI nr
Match: XP_023553921.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266 bits (681), Expect = 3.89e-88
Identity = 146/186 (78.49%), Postives = 154/186 (82.80%), Query Frame = 0


Query: 1   MDSAISLIASNLPLSSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFKFVS 60
           MDSA+SL+ASN PLS++   FS   FTH T ISPIS +   +  LRAAVPPLHRR KF+S
Sbjct: 1   MDSALSLMASNAPLSTITRSFSTLYFTHSTSISPISTL---SFSLRAAVPPLHRRHKFIS 60

Query: 61  KFASGNGNGGVRDESGGGG--DDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTC 120
             +SGNGNGGVR ESGGGG  DDGGPDGGD  S LLA EAE DATLSAD IVL VGGM C
Sbjct: 61  NSSSGNGNGGVRGESGGGGGDDDGGPDGGDVGSNLLAGEAEDDATLSADAIVLGVGGMRC 120

Query: 121 MGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGF 180
            GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTTCGF
Sbjct: 121 KGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCGF 180

Query: 181 SSKVQG 184
           SSKVQG
Sbjct: 181 SSKVQG 183

[Close]

BLAST of MC00g0024 vs. NCBI nr
Match: XP_023553917.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553918.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553920.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266 bits (681), Expect = 4.02e-88
Identity = 146/186 (78.49%), Postives = 154/186 (82.80%), Query Frame = 0


Query: 1   MDSAISLIASNLPLSSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFKFVS 60
           MDSA+SL+ASN PLS++   FS   FTH T ISPIS +   +  LRAAVPPLHRR KF+S
Sbjct: 1   MDSALSLMASNAPLSTITRSFSTLYFTHSTSISPISTL---SFSLRAAVPPLHRRHKFIS 60

Query: 61  KFASGNGNGGVRDESGGGG--DDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTC 120
             +SGNGNGGVR ESGGGG  DDGGPDGGD  S LLA EAE DATLSAD IVL VGGM C
Sbjct: 61  NSSSGNGNGGVRGESGGGGGDDDGGPDGGDVGSNLLAGEAEDDATLSADAIVLGVGGMRC 120

Query: 121 MGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGF 180
            GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTTCGF
Sbjct: 121 KGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCGF 180

Query: 181 SSKVQG 184
           SSKVQG
Sbjct: 181 SSKVQG 183

[Close]

BLAST of MC00g0024 vs. NCBI nr
Match: XP_022967630.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 261 bits (668), Expect = 4.10e-86
Identity = 145/189 (76.72%), Postives = 155/189 (82.01%), Query Frame = 0


Query: 1   MDSAISLIASNLPL---SSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFK 60
           MDSA+S++ASN PL   S++   FS  NFTH   ISPIS +   +  LRAAVPPLHRR K
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTLNFTHSPSISPISTL---SFSLRAAVPPLHRRHK 60

Query: 61  FVSKFASGNGNGGVRDESGGGG--DDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGG 120
           F+S  +SGNGNGGVR ESGGGG  DDGGPDGGD  S LL+ EAE DATLSAD IVL VGG
Sbjct: 61  FISNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGG 120

Query: 121 MTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTT 180
           MTC GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTT
Sbjct: 121 MTCKGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTT 180

Query: 181 CGFSSKVQG 184
           CGFSSKVQG
Sbjct: 181 CGFSSKVQG 186

[Close]

BLAST of MC00g0024 vs. ExPASy TrEMBL
Match: A0A6J1CKX0 (copper-transporting ATPase PAA1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111012241 PE=4 SV=1)

HSP 1 Score: 360 bits (923), Expect = 2.70e-125
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MDSAISLIASNLPLSSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFKFVS 60
           MDSAISLIASNLPLSSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFKFVS
Sbjct: 1   MDSAISLIASNLPLSSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFKFVS 60

Query: 61  KFASGNGNGGVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMG 120
           KFASGNGNGGVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMG
Sbjct: 61  KFASGNGNGGVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMG 120

Query: 121 CSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSS 180
           CSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSS
Sbjct: 121 CSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSS 180

Query: 181 KVQG 184
           KVQG
Sbjct: 181 KVQG 184

[Close]

BLAST of MC00g0024 vs. ExPASy TrEMBL
Match: A0A6J1HV12 (copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467071 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 1.98e-86
Identity = 145/189 (76.72%), Postives = 155/189 (82.01%), Query Frame = 0


Query: 1   MDSAISLIASNLPL---SSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFK 60
           MDSA+S++ASN PL   S++   FS  NFTH   ISPIS +   +  LRAAVPPLHRR K
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTLNFTHSPSISPISTL---SFSLRAAVPPLHRRHK 60

Query: 61  FVSKFASGNGNGGVRDESGGGG--DDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGG 120
           F+S  +SGNGNGGVR ESGGGG  DDGGPDGGD  S LL+ EAE DATLSAD IVL VGG
Sbjct: 61  FISNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGG 120

Query: 121 MTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTT 180
           MTC GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTT
Sbjct: 121 MTCKGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTT 180

Query: 181 CGFSSKVQG 184
           CGFSSKVQG
Sbjct: 181 CGFSSKVQG 186

[Close]

BLAST of MC00g0024 vs. ExPASy TrEMBL
Match: A0A6J1HX97 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467071 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 2.05e-86
Identity = 145/189 (76.72%), Postives = 155/189 (82.01%), Query Frame = 0


Query: 1   MDSAISLIASNLPL---SSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFK 60
           MDSA+S++ASN PL   S++   FS  NFTH   ISPIS +   +  LRAAVPPLHRR K
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTLNFTHSPSISPISTL---SFSLRAAVPPLHRRHK 60

Query: 61  FVSKFASGNGNGGVRDESGGGG--DDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGG 120
           F+S  +SGNGNGGVR ESGGGG  DDGGPDGGD  S LL+ EAE DATLSAD IVL VGG
Sbjct: 61  FISNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGG 120

Query: 121 MTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTT 180
           MTC GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTT
Sbjct: 121 MTCKGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTT 180

Query: 181 CGFSSKVQG 184
           CGFSSKVQG
Sbjct: 181 CGFSSKVQG 186

[Close]

BLAST of MC00g0024 vs. ExPASy TrEMBL
Match: A0A6J1HI09 (copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463827 PE=4 SV=1)

HSP 1 Score: 261 bits (667), Expect = 2.82e-86
Identity = 145/189 (76.72%), Postives = 154/189 (81.48%), Query Frame = 0


Query: 1   MDSAISLIASNLPL---SSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFK 60
           MDSA+S++ASN PL   S++   FS  NFTH   ISPIS +   +  LRAAVPPLHRR K
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTLNFTHSLSISPISTL---SFSLRAAVPPLHRRHK 60

Query: 61  FVSKFASGNGNGGVRDESGGGG--DDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGG 120
           F+S  +SGNGNGGVR ESGGGG  DDGGPDGGD  S LLA EAE DA LSAD IVL VGG
Sbjct: 61  FISNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLAGEAEDDAALSADAIVLGVGG 120

Query: 121 MTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTT 180
           MTC GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTT
Sbjct: 121 MTCKGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTT 180

Query: 181 CGFSSKVQG 184
           CGFSSKVQG
Sbjct: 181 CGFSSKVQG 186

[Close]

BLAST of MC00g0024 vs. ExPASy TrEMBL
Match: A0A6J1HFH1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463827 PE=4 SV=1)

HSP 1 Score: 261 bits (667), Expect = 2.91e-86
Identity = 145/189 (76.72%), Postives = 154/189 (81.48%), Query Frame = 0


Query: 1   MDSAISLIASNLPL---SSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFK 60
           MDSA+S++ASN PL   S++   FS  NFTH   ISPIS +   +  LRAAVPPLHRR K
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTLNFTHSLSISPISTL---SFSLRAAVPPLHRRHK 60

Query: 61  FVSKFASGNGNGGVRDESGGGG--DDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGG 120
           F+S  +SGNGNGGVR ESGGGG  DDGGPDGGD  S LLA EAE DA LSAD IVL VGG
Sbjct: 61  FISNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLAGEAEDDAALSADAIVLGVGG 120

Query: 121 MTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTT 180
           MTC GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTT
Sbjct: 121 MTCKGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTT 180

Query: 181 CGFSSKVQG 184
           CGFSSKVQG
Sbjct: 181 CGFSSKVQG 186

[Close]

BLAST of MC00g0024 vs. TAIR 10
Match: AT4G33520.1 (P-type ATP-ase 1 )

HSP 1 Score: 139.4 bits (350), Expect = 2.8e-33
Identity = 89/175 (50.86%), Postives = 112/175 (64.00%), Query Frame = 0


Query: 21  FSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRR-----------FKFVSKFASGNGNG 80
           F G  FT     S  SA+ S    L AAV P+ R            F+ +S    G+G G
Sbjct: 62  FHGSRFT-----SSNSALRS----LGAAVLPVIRHRLECLSSSSPSFRSISS-GGGSGFG 121

Query: 81  GVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRIL 140
           G    SGGGG  GG + GD++SKL A  ++G +  S+D+I+LDVGGMTC GCSASVK+IL
Sbjct: 122 GYNGGSGGGG-GGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKIL 181

Query: 141 ESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG 185
           ESQPQV+ ASV+L +ETA+VWPV EAK  P+W++ LGE LA HLT CGF S  +G
Sbjct: 182 ESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRG 225

[Close]

BLAST of MC00g0024 vs. TAIR 10
Match: AT4G33520.2 (P-type ATP-ase 1 )

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32
Identity = 88/171 (51.46%), Postives = 110/171 (64.33%), Query Frame = 0


Query: 21  FSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRR-----------FKFVSKFASGNGNG 80
           F G  FT     S  SA+ S    L AAV P+ R            F+ +S    G+G G
Sbjct: 62  FHGSRFT-----SSNSALRS----LGAAVLPVIRHRLECLSSSSPSFRSISS-GGGSGFG 121

Query: 81  GVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRIL 140
           G    SGGGG  GG + GD++SKL A  ++G +  S+D+I+LDVGGMTC GCSASVK+IL
Sbjct: 122 GYNGGSGGGG-GGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKIL 181

Query: 141 ESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSS 181
           ESQPQV+ ASV+L +ETA+VWPV EAK  P+W++ LGE LA HLT CGF S
Sbjct: 182 ESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of MC00g0024 vs. TAIR 10
Match: AT4G33520.3 (P-type ATP-ase 1 )

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32
Identity = 88/171 (51.46%), Postives = 110/171 (64.33%), Query Frame = 0


Query: 21  FSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRR-----------FKFVSKFASGNGNG 80
           F G  FT     S  SA+ S    L AAV P+ R            F+ +S    G+G G
Sbjct: 62  FHGSRFT-----SSNSALRS----LGAAVLPVIRHRLECLSSSSPSFRSISS-GGGSGFG 121

Query: 81  GVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRIL 140
           G    SGGGG  GG + GD++SKL A  ++G +  S+D+I+LDVGGMTC GCSASVK+IL
Sbjct: 122 GYNGGSGGGG-GGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKIL 181

Query: 141 ESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSS 181
           ESQPQV+ ASV+L +ETA+VWPV EAK  P+W++ LGE LA HLT CGF S
Sbjct: 182 ESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of MC00g0024 vs. TAIR 10
Match: AT5G21930.1 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 109 IVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEA 168
           I+LDV GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T     +  E+
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVT----ADTAES 137

Query: 169 LAKHLTTCGFSSK 182
           LAK LT  GF +K
Sbjct: 138 LAKRLTESGFEAK 146

[Close]

BLAST of MC00g0024 vs. TAIR 10
Match: AT5G21930.2 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 109 IVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEA 168
           I+LDV GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T     +  E+
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVT----ADTAES 137

Query: 169 LAKHLTTCGFSSK 182
           LAK LT  GF +K
Sbjct: 138 LAKRLTESGFEAK 146

The following BLAST results are available for this feature:

BLAST of MC00g0024 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZC9	1.5e-31	51.46	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
B9DFX7	1.7e-06	43.84	Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of MC00g0024 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142006.1	5.57e-125	100.00	copper-transporting ATPase PAA1, chloroplastic-like [Momordica charantia]	[more]
XP_038887264.1	1.56e-88	77.78	copper-transporting ATPase PAA1, chloroplastic-like [Benincasa hispida]	[more]
XP_023553921.1	3.89e-88	78.49	copper-transporting ATPase PAA1, chloroplastic-like isoform X2 [Cucurbita pepo s...	[more]
XP_023553917.1	4.02e-88	78.49	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo s...	[more]
XP_022967630.1	4.10e-86	76.72	copper-transporting ATPase PAA1, chloroplastic-like isoform X2 [Cucurbita maxima...	[more]

BLAST of MC00g0024 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKX0	2.70e-125	100.00	copper-transporting ATPase PAA1, chloroplastic-like OS=Momordica charantia OX=36...	[more]
A0A6J1HV12	1.98e-86	76.72	copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1HX97	2.05e-86	76.72	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1HI09	2.82e-86	76.72	copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita mosc...	[more]
A0A6J1HFH1	2.91e-86	76.72	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita mosc...	[more]

BLAST of MC00g0024 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33520.1	2.8e-33	50.86	P-type ATP-ase 1	[more]
AT4G33520.2	1.1e-32	51.46	P-type ATP-ase 1	[more]
AT4G33520.3	1.1e-32	51.46	P-type ATP-ase 1	[more]
AT5G21930.1	1.2e-07	43.84	P-type ATPase of Arabidopsis 2	[more]
AT5G21930.2	1.2e-07	43.84	P-type ATPase of Arabidopsis 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 110..170 e-value: 6.2E-11 score: 42.6
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 108..182 score: 14.389711
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 110..171 e-value: 2.94225E-12 score: 57.2305
None	No IPR available	GENE3D	3.30.70.100		coord: 107..184 e-value: 3.3E-16 score: 61.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..90
None	No IPR available	PANTHER	PTHR43520:SF22	COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC	coord: 91..181
None	No IPR available	PANTHER	PTHR43520	ATP7, ISOFORM B	coord: 91..181
IPR017969	Heavy-metal-associated, conserved site	PROSITE	PS01047	HMA_1	coord: 113..142
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 109..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0024.1	MC00g0024.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055070	copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0043682	P-type divalent copper transporter activity
molecular_function	GO:0046872	metal ion binding